BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] (304 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] Length = 304 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 304/304 (100%), Positives = 304/304 (100%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY Sbjct: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN Sbjct: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS Sbjct: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE Sbjct: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI Sbjct: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Query: 301 DYDF 304 DYDF Sbjct: 301 DYDF 304 >gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 315 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 167/304 (54%), Positives = 218/304 (71%), Gaps = 8/304 (2%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++R L L F +P + AQ++R+ SWNINTLSE+ G+ L KNSV R +DY LLR+Y Sbjct: 17 LLRSVALVLFFCFIP-NENFAQRIRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRY 75 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 A+ L+ADIV LQEMGSY A+ +VFP++TW I YS H+ +HTAI RK Sbjct: 76 AERLNADIVCLQEMGSYAAIKRVFPEDTWEILYSGNDSDEHT-------VHTAIVARKGT 128 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V VL++SY + S+AG RR+VE+L E+NG KIW+LDIHLKSFCF+DSL++ Y+ S Sbjct: 129 VHVLEKSYLSMDTNKLDSKAGKRRSVEILFEVNGIKIWLLDIHLKSFCFVDSLKDAYTLS 188 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C L+ Q WL WI QKK S +PF+IAGDFNRKIN+ G+ND+ W I + LIR P + Sbjct: 189 CYTLNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNK 248 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K S CNA+K++R + PID+FVMDQNAYK+LI+ S+SE+ Y E+DIK RG RLSDHCPI+ Sbjct: 249 KRSWCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITT 308 Query: 301 DYDF 304 DY+F Sbjct: 309 DYNF 312 >gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] Length = 231 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 118/235 (50%), Positives = 166/235 (70%), Gaps = 9/235 (3%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +AQ++R+ SWNIN LSE+ GV+L+KNSV R +DY LL++YA+ LDADIV LQE+GSY A Sbjct: 3 LAQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEA 62 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + +VFP + W I YS H+ +HTAI +RK + +LQ+SY + + S+ Sbjct: 63 IKRVFPNDKWDILYSGSNTDKHA-------MHTAIVIRKGAIHLLQKSYLPMDTEGLDSK 115 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 AG RRAVE+L E++G+KIW+LDIHLKSFCFLDS+E++Y SC +L+ QA WLK W+ QK Sbjct: 116 AGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKN 175 Query: 200 ESLVPFVIAGDFNRKIN--YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +PF+IAGDFNRKIN + G D+ W+ I+ +++L+R P +K+ K L+ Sbjct: 176 NLNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHKKNHNAIRTKILK 230 >gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] Length = 125 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 2/122 (1%) Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +LSQQ +WLK W QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+ LIRFP+EK+ Sbjct: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S CN K RNK +DYFV+D++ FLI SFS + Y++ D+ +R +LS HCP++I+Y Sbjct: 61 STCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118 Query: 303 DF 304 DF Sbjct: 119 DF 120 >gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] Length = 283 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 22/300 (7%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L ++ L+P TA + +RL +WN+ T Q +L + RT + L YA+ L Sbjct: 3 LPVITGLLPATAGAREDIRLSTWNLEWLTTRPQGDPALPADVTPRTVVELEHLAAYARRL 62 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI L+E+ S A++FP + IF + + ++ A+AVR + Sbjct: 63 APDIAALEEVDSPALAARLFPAPAYRIFITHDTVVQK----------VALAVRAELAVTR 112 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L + R +++ + + VL +HLK+ C DS ++ P+C L Sbjct: 113 HADVTALDVYAPDAPHHLRAGLDVSIGTGADSLRVLVVHLKAGCR-DSAPDSRRPACRTL 171 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +Q + DWI ++++ F + GDFNR L +D + T+ + L + S Sbjct: 172 LRQIAIVADWILERQDEGEAFAVLGDFNR---LLAPDDPAFHTLAASGPLALVTAGRASP 228 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 C ID+ ++ AY + +S +LY+ED + RLSDHCP+S++ Sbjct: 229 CAQGSYF-----IDHILVGGPAYARVRPDSLRVMLYHEDS-GTEASRLSDHCPVSVNLSL 282 >gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 406 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 94/312 (30%), Positives = 152/312 (48%), Gaps = 45/312 (14%) Query: 6 VLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 V+AL L C S + + L +WN++ L+ ++G + RT +DY LR Sbjct: 18 VIALAAGLSACGFSTDRTPKREVGDIELATWNLSWLASEDGA----GTNPRTEADYARLR 73 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 YA LDAD++ LQE+ A +VF + +++R S K Sbjct: 74 TYAARLDADVIALQEVADEFAARRVFDPTVYDFAIASKRGAQRSG-----------FAYK 122 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN------GKKIWVLDIHLKSFCFLDS 172 +++RV + + L A D G R V++ +++ +++ +L +HLKS CF DS Sbjct: 123 RDLRVRRHAD--LAALDV---GGLRPGVDIELDLGRGADGTPRRLRLLALHLKSGCFDDS 177 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 L S +C LS+Q L+ WI + VPF + GDFNR++N D W+ ID + Sbjct: 178 LRKR-SNACRKLSRQLPQLEGWIDARAREGVPFAVLGDFNRRMNA---RDALWREIDDAE 233 Query: 233 S----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L + + SRC K R ID+ +D +A +L+ SF +++Y++ D + Sbjct: 234 PAAADLTLVTEGQRSRCWKGKYPRF---IDHIALDLHASAWLVPNSFEQLVYSDSDT-AH 289 Query: 289 GKRLSDHCPISI 300 + LSDHCPIS+ Sbjct: 290 ARALSDHCPISV 301 >gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] Length = 358 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 53/318 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P T +A +++ +WN++ L+E +L ++ RT D + L YA LDADI+ +QE Sbjct: 54 PVTTPLAGGLKIATWNLDWLTEPGSEATLPPDAPHRTEKDISRLSHYATLLDADIIAVQE 113 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + S + + ++FP + + I S +++ AVR+ ++ + P L Sbjct: 114 VASPDILRRLFPPDRYVIHLSGDKVAQR----------VGFAVRRG---LMVTANPDLSG 160 Query: 134 KDSFS-------RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D + R+G V+L G ++ +L +HLK+ C D+ + P+C+ L Sbjct: 161 LDVYGPHAAHHLRSGADITVDLPASSGGGRLRLLAVHLKAGCRRDAFAKSLRPACATLQA 220 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q L WI ++K+ VPF+I GDFNR +L DD + ++ L + C+ Sbjct: 221 QTIPLTGWIAERKQEGVPFLILGDFNR---WLHPGDDVLQKMEQVAPLTLLTVNRRDPCH 277 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI-KSRGKR-------------- 291 + ID+ + A ++ ES + Y K G+ Sbjct: 278 HGASF-----IDHILAGGVARSWIDPESLRVMTYGPATTSKPEGQAMRYQLPWTRMPPGK 332 Query: 292 ---------LSDHCPISI 300 LSDHCP+SI Sbjct: 333 LIQPDSSDGLSDHCPVSI 350 >gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family [Gluconacetobacter diazotrophicus PAl 5] gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] Length = 290 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 28/305 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEG--VSLWKNSVKRTTSDYTLLR 58 ++R++ A + + + + +++ +WN++ L+ + +L + R +D L Sbjct: 4 VLRQWACAGLVAVALAHPAAGRTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLA 63 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 YA LDADIV QE+ S A++FP + I + + ++ T +AV Sbjct: 64 VYAARLDADIVGFQEVDSPALAARLFPPGRYRIVMTADPVVQR----------TGLAVAT 113 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + +P L A D + R +++ + + VL +HLK+ C D+ + Sbjct: 114 S---LTIERHPDLAALDVYPPTAPHPLRSGLDVTIGDGTANLRVLVVHLKAGCR-DAAPS 169 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +C L++Q L DW+ Q+++ VPF++ GDFNR + D F+ +D + L Sbjct: 170 DRRAACLTLARQMAVLDDWVAQRQDEGVPFLVMGDFNRNLT---PGDPFFHLLDQDGPLT 226 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + S C ID+ ++ A +L +S + Y+E D +R LSDH Sbjct: 227 LATAGRASPCWGGTYF-----IDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDH 280 Query: 296 CPISI 300 CP+S+ Sbjct: 281 CPVSV 285 >gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] Length = 293 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 138/311 (44%), Gaps = 33/311 (10%) Query: 3 RKYVLALVFFL----VPCTASVAQKVRLVSWNINTLSEQEGV--SLWKNSVKRTTSDYTL 56 R +V L+ + +P A A +RL +WN++ L+ + +L + R +D Sbjct: 6 RPFVFLLMVLITGGHMPMMAH-AMPLRLSTWNLDWLTTRPAGDRALPDDVRPRDMADIVR 64 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L +YA L DI L+E+ + A++FP + I S + ++ TA+AV Sbjct: 65 LARYAARLHPDIAALEEVDTPELAARLFPAPDYRILISGDGVVQK----------TALAV 114 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRR---AVELLVEINGKKIWVLDIHLKSFCFLDSL 173 R ++ +P + A D + R +++ V + VL IHLK+ C D Sbjct: 115 RGG---LIVTRHPDVRAIDVYPPDAPRHLRSGLDVTVGDGRASLRVLVIHLKAGCR-DGA 170 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + P+C L +Q L DWI ++++ PF I GDFN + LG D + N Sbjct: 171 PDDRRPACRTLYRQVAALTDWIMERQDEGEPFAIMGDFN---HMLGPGDAMLAMLGENGP 227 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 L+ S C ID+ V+ A ++L +S + Y E D + RLS Sbjct: 228 LVAPTVGLASPCWGGNYF-----IDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLS 281 Query: 294 DHCPISIDYDF 304 DHCP+SI D Sbjct: 282 DHCPVSIGLDM 292 >gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 288 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 48/308 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V+AL + +A++ +R+ +WN+ LSE K RT +DY +R+YA+ L+ Sbjct: 9 VVALFGLALSPSAALTAPLRVATWNMEHLSEDGA----KGCKPRTDADYETMRRYAERLN 64 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH---------SKRDSNNDIHTAIAV 116 AD+V +E+ S A A+VF + + N +++ I I V Sbjct: 65 ADVVAFEEVESVKAAARVFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGFAIRKGITV 124 Query: 117 -RKKNVRVLQQSYP-LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R ++ LQ P L G D RA + LL +HLKS CF Sbjct: 125 ERAPDLTDLQLGDPNLRGGVDVTIRAPGHAPLRLLA-----------VHLKSGCF----A 169 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----P 230 + +C+ L +Q L+ WI + V F + GDFNR++ +D W+ ID P Sbjct: 170 GDAAKACATLMRQVPILERWIDARAAEGVRFAVLGDFNRRLAR--ADDVVWREIDDADPP 227 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N L +C+ R ID+ V+D A + L E F E+ Y + G+ Sbjct: 228 NADLSLAEGSAGPKCDP----RYSEFIDHIVLDARAARDL--EGFEELTY------AAGE 275 Query: 291 RLSDHCPI 298 R SDHCP+ Sbjct: 276 RGSDHCPV 283 >gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO 3283-01] gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 321 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 39/304 (12%) Query: 10 VFFLVPC-----TASVAQKVRLVSWNINTL--SEQEGVSLWKNSVK-RTTSDYTLLRQYA 61 LV C +A+ A ++L +WN++ L G + + RT++D + L YA Sbjct: 31 ALVLVACCLSFTSATAADTLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISSLASYA 90 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +L D+V LQE+ S ++FP + + S + ++ H TA+AVR Sbjct: 91 AHLHGDVVALQEIESPAGAGQLFPFARYHLAISQDHILQH----------TALAVRAD-- 138 Query: 122 RVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + P + A D+++ A R +++ + NG+ + +L +HLK+ C D+L + Sbjct: 139 -IPFEQNPDVTALDAYATAPTTHHHLRSGLDITLHQNGQALRILVVHLKAGC-PDNLPHA 196 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 P+C+ L QQ L DW+ + + F I GDFNR +L +D + T+ L Sbjct: 197 SRPACTTLWQQFAALDDWVATRTQHHEAFAIMGDFNR---HLTVHDPLFLTLLRIAPLDL 253 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S C ID+ ++ A + + S I E+ G+ LSDHC Sbjct: 254 ATAGMASPCQGGSYF-----IDHIILGGAARAWKVPNSLRVIPLAEE----TGQNLSDHC 304 Query: 297 PISI 300 P+SI Sbjct: 305 PVSI 308 >gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] Length = 287 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 39/299 (13%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +SWN+ LSEQ+ VKRT DYT+L+Q + DI+ QE+ S ++ ++ P Sbjct: 1 MSWNLQWLSEQQ------QEVKRTEQDYTMLKQVFLTYEPDILAFQEVDSAASLQRIVPN 54 Query: 87 NTWCIFYSTERLINHSKRDSNNDIH--TAIAVR-----KKNVRVLQQSYPLLG-AKDSFS 138 + + IF S+ R+ N K D N ++ T AV+ KK+ + S P L + + Sbjct: 55 DQYQIFMSS-RIKN--KEDIFNGVNQFTGFAVKNYLTVKKHPDITTLSSPALALGEKQYY 111 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R + V +N I V+++HLKS CF L+N SC L+ Q L+ WI Q Sbjct: 112 QQKLRYGSAITVSLNQHDIIVVNVHLKSGCFTPKQLKNNRKKSCRTLNFQRTLLQQWIKQ 171 Query: 198 KKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ + PF++ GDFN I + N+ +F+ + + L C K ++NK Sbjct: 172 QQINKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNVKGNC-LTKKIKNK- 229 Query: 256 PIDYFVMDQNAYKFLIQESFS----------EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y YK LI FS ++ Y+++ + + +LSDHCP+ F Sbjct: 230 KVYY-----RHYKELIDHGFSSEHFNITSVQQLPYSKEQVSTY--QLSDHCPVIFSLSF 281 >gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] Length = 316 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 25/260 (9%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN-HSKRDSN 107 R+ S+ ++ YA +LDADI+ LQE+ S A+A+VFP++ W I S +S R+S Sbjct: 67 RSKSEIAAMQAYAASLDADIIALQEVASVKAIAQVFPEDQWQIIISKRADSEVYSCRESG 126 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKD----SFSRAGNRRAVELLVEINGKKIWVLDIH 163 N + ++K +++S P+L + G R + + V+ VL++H Sbjct: 127 N-----TSTQQKVAFAVRKSIPVLNTHHYDELALGLNGLRYGLSVTVDTADGATEVLNVH 181 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 LKS CF+D E + +C ++QA WL W +K+ S P+++ GDFN ++ +N+ Sbjct: 182 LKSGCFVDDYEKSDRKACPTFAKQAVWLDKWFERKEASKQPYIVMGDFNHRL--ATDNNR 239 Query: 224 FWKTIDPND----SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + + N S ++ + C+ R PID+ + I + ++ Sbjct: 240 LMQELANNSNGAASTLKHITQNVVSCHP----RYPAPIDHQFA--GGFSQAIPTNV-QMR 292 Query: 280 YNEDDIKSRGKRLSDHCPIS 299 Y D KS LSDHC ++ Sbjct: 293 YFAD--KSETAMLSDHCAVT 310 >gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] Length = 320 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 34/310 (10%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F P + + + SWN+ L+ + + + +RT +DY L A LD DI+ Sbjct: 20 FAKPNVPPLTTTLTVASWNLQWLAS-DPIIIIPPPPQRTRADYQQLAHIATQLDTDILAF 78 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------AIAVRKKNVRVL 124 QE+ A+ KV + + +S + + NN HT A+RK V Sbjct: 79 QEVADRQAIEKVLTNDEYVFEFSRRQ----QESQHNNKRHTKPWPQFVGFAIRKGISYVR 134 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + + S R V++ + +GK + +L +HLKS C+ ++T + +C Sbjct: 135 NADLHQLDLRGNKSL---RYGVDITLLNDGKAALRLLTVHLKSGCY-SQQQSTKNRACRQ 190 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND----SLIRFPK 239 L++Q + L+ W+ ++ +PF+I GDFNR++ +ND W+ +D SL + Sbjct: 191 LNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGLSLYAATE 248 Query: 240 EKDSRCNANKNLRNK-------IP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + S+C + ++K P ID+ V+D+ A + ++ SF E+ + + +K+ Sbjct: 249 GQKSQCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVEVVKAFN- 307 Query: 291 RLSDHCPISI 300 LSDHCPI++ Sbjct: 308 -LSDHCPITL 316 >gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 301 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 49/302 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+++++ SWNI L E RT +DY L +YAK L+AD++ LQE+ S Sbjct: 23 AEEIKVASWNIAWLGSHE-------YNHRTDADYKKLAKYAKQLNADVIALQEVESEYWA 75 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQSYPLLGAKDSFSR 139 KVF N + ++ST+ + +A++K ++ V + Y L Sbjct: 76 RKVFG-NDYDYYFSTKDWVQR----------VGVAIKKSQHFTVEAKEYKALDV------ 118 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPS-----------CSLLS 185 R +++ + NGK + +L +HLKS CF LDS PS C+ LS Sbjct: 119 GKVRHGMDITLTKNGKTLHLLAVHLKSGCFAAPLDSSSVKAMPSTSIKEEKRKEACTKLS 178 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINY-----LGNNDDFWKTI--DPNDSLIRFP 238 +Q L+ WI +++ GDFNR+ + + W+ + D ++L Sbjct: 179 KQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGKETLWTPT 238 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +S C K ID+ + A + I+ SF ++++ K + LSDHCPI Sbjct: 239 MTANSGCWGG---YYKEYIDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRNLSDHCPI 295 Query: 299 SI 300 S+ Sbjct: 296 SV 297 >gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] Length = 292 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 138/302 (45%), Gaps = 34/302 (11%) Query: 11 FFLVPC---TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + ++ C + + A+ + + SWNI LS E V+ K S KR +D+ L QY ++LDAD Sbjct: 7 WIMLACLLSSQTFAEPLTISSWNIEWLSTNEAVN--KFSSKRNQADFDKLEQYFQSLDAD 64 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQ 126 +V QE+ N + ++ N + I S L +S R + +T AVRK Sbjct: 65 VVAFQEVDDVNDIQRI-TGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGITLTDYA 123 Query: 127 SYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +PL R+ N R A ++VE + I +L +HLK+ C S + CS Sbjct: 124 DFPL-------ERSANSKLRFASYMVVETDSNPIHMLSVHLKAGC---SGAYKSNRDCSR 173 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L QA+ L WI Q++ + I GDFN ++Y + D WK + N ++ + Sbjct: 174 LKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSY--SRDWMWKDMTQNTDAQLVTRKTRA 231 Query: 244 RCNANKNLRN------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 C N N + ID+ V+ K L + ++ D+ +LSDHCP Sbjct: 232 DCKVRSNRNNHRTHQFRSVIDHIVVS----KSLDASPAKQKVFETQDV--LDYKLSDHCP 285 Query: 298 IS 299 +S Sbjct: 286 VS 287 >gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H] gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H] Length = 280 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 25/293 (8%) Query: 11 FFLVPCTASV-AQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 FL V A ++L +WN++ TL +L K+ D+ L Y ++LD+D Sbjct: 5 LFLAGSMGPVSAHTIKLSTWNMDWLTLRPSGDPALPKDVPGGEHRDFAKLAAYVRHLDSD 64 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V +E A ++VF T+ I + + ++ D+H + + L + Sbjct: 65 VVAFEETDGPLAASRVFSSTTYQIILTPDPVVQRVGVAVRRDLHVTV---NDELSALNVA 121 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P GA R +++ + + +L +HLK+ C+ D N SC L QQ Sbjct: 122 GP--GAPHQL-----RGGLDVTISDGHASLRLLVVHLKTGCW-DQPLNQRQHSCPTLYQQ 173 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + ++DW+ ++++ + + GDFNR++ +D + I+ + K S C Sbjct: 174 VRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKASPCWG 230 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ A +L+ +S + Y D + + LSDHCP+S+ Sbjct: 231 GEYF-----IDHILLGNAARDWLVPDSLRVMTYKNDTVPA---GLSDHCPVSV 275 >gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] Length = 291 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 29/292 (9%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + + + SWNI LS E V+ K S +R +D+ L QY ++L++D++ QE+ Sbjct: 16 SQAFGEPLTISSWNIEWLSTNEAVN--KFSDQRDQADFDKLEQYFQSLNSDVLAFQEVDD 73 Query: 77 YNAVAKVFPKNTWCIFYSTERL---INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 NA+ ++ + + I S L NH ++ N +T AVRK + +PL Sbjct: 74 INAIQRI-AGDQYKILMSDRALPENSNHQFKEVNQ--YTGFAVRKGIILTDYADFPL--- 127 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +S + + R A ++VE + K I +L +HLK+ C S + CS L QAQ L Sbjct: 128 -ESGANSKLRFASYMVVETDTKPIHMLSVHLKAGC---SGAYKSNRDCSRLKDQAQQLNK 183 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 WI Q++ + I GDFN ++Y + D WK + N ++ + C N N Sbjct: 184 WIQQRERQGQDYAILGDFNHNLSY--SRDWMWKDLTQNADAQLATRKTRADCKVRSNRNN 241 Query: 254 ------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ V+ K L + ++ D+ +LSDHCP+S Sbjct: 242 HRTHQFRSVIDHIVVS----KSLDASPAKQKVFETQDVLDY--KLSDHCPVS 287 >gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] Length = 291 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 27/299 (9%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L+ + ++A+ + + SWNI LS E V+ K S KR +D+ L +Y ++L+AD+ Sbjct: 8 LMLGCLLSNQAIAEPLTISSWNIEWLSTNEAVN--KFSDKRDQADFDKLGRYFQSLNADV 65 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVRVLQ 125 V QE+ NA+ +V + + I S L NH ++ N +T AVRK Sbjct: 66 VAFQEVDDVNAIQRV-AGDQYQILMSDRALPKNGNHQFKEVNQ--YTGFAVRKGVALTDY 122 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 +PL ++ S + R A +++E K I +L +HLK+ C S + CS L Sbjct: 123 ADFPL----ETTSNSKLRFASYIVIETETKPIHMLSVHLKAGC---SGAYKSNRDCSRLK 175 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +QAQ L WI Q++ + + I GDFN + Y + D WK + ++ + C Sbjct: 176 EQAQQLNKWIKQRERNNEDYAILGDFNHNLAY--SRDWIWKELTQYTDAQLATRKTRADC 233 Query: 246 NANKNLRNKIPIDYF--VMDQNAYKFLIQESFSEILYNEDDIKSR---GKRLSDHCPIS 299 N RN F V+D ++ ES + + K++ +LSDHCP+S Sbjct: 234 KVRSN-RNNHRTHQFRSVIDH----IVVSESLNAAPAKQQVFKTQDVLDYKLSDHCPVS 287 >gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 442 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 81/313 (25%), Positives = 125/313 (39%), Gaps = 39/313 (12%) Query: 3 RKYVLALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 R VLA + C A +R+ +WN L+ G + R + Sbjct: 150 RILVLATALLVSACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFP----RDEAALD 205 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDI 110 L+ Y +DADI LQE+ A+A+VF + W F+ +R + RD + Sbjct: 206 LIADYITRVDADIWLLQEVDGDGALARVF-GDGW-TFHVEQRAGGETYPLCRGRDDGTRL 263 Query: 111 ---HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 +TAIAVR + P L A D R V + + ++ +HL S Sbjct: 264 RAQNTAIAVRDG---ITHDRLPDLAALDLTGEGRTRYGVAITLP-GPVPTDIMSVHLTSG 319 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 CF S C L QA L+ WI Q+ + ++ GDFNR++ +D W Sbjct: 320 CF----SGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLE--AEDDPVWTG 373 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + ND + + + R + ID+ ++ A ++ SF E Y+ Sbjct: 374 L--NDGTPAGLHIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFRETTYDTP---- 427 Query: 288 RGKRLSDHCPISI 300 R SDHCPIS+ Sbjct: 428 --ARPSDHCPISL 438 >gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] Length = 296 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 47/312 (15%) Query: 11 FFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 FF C A A+++ +WN+ LS ++ +R+TSDY L + N+ Sbjct: 9 FFTALCLLFSFHAVGAEQISFSTWNLEWLSSSPSSKFEQS--QRSTSDYQALNHHFSNMQ 66 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVR------ 117 +D+V QE+ +A+ KV N + +F+S +R + ++R +DI +T AVR Sbjct: 67 SDVVAFQEVNDADALVKVI-GNDYQLFFS-QRSESDNRRHQFDDINQYTGFAVRNGIAVS 124 Query: 118 -KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLEN 175 K+++R+ D+ S + R A +++ +GK+ + L +HLK+ C S Sbjct: 125 NKRDLRL-----------DNSSNSKMRFASYIIIRPSGKQPVHALSVHLKARC---SGRF 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S C +L QQ + L WI Q++ + ++I GDFN + Y D W I + Sbjct: 171 NSSRDCKILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGY--QRDWLWDEIAQDTQAT 228 Query: 236 RFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 K + C N K + + ID+ ++ ++ L + +Y +D+ + Sbjct: 229 LVSKSTKAECKVRSRNNPRKTHQFRSLIDHIIVSES----LTASKPKQDVYPVEDVLNH- 283 Query: 290 KRLSDHCPISID 301 +LSDHCP+S D Sbjct: 284 -QLSDHCPLSSD 294 >gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999] Length = 321 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 38/292 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ + +WN+ L+ + RT SD +R+Y N+DAD+ LQE+ S AV Sbjct: 50 QLTVATWNVEHLA----YPINTGCKPRTESDINAMREYVNNVDADVFALQEVASEQAVRL 105 Query: 83 VFPKNTWCIFYS------TERLINHSKRDSNNDIHTAI--AVRKKNVRVLQQSYPLLGAK 134 +FP +TW + S T + + I A+ + +V+ L + LG Sbjct: 106 LFPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSE----LG-- 159 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + G R +EL ++ I +L++H+KS CF+D+ + SC +QQA L W Sbjct: 160 --LNNPGLRYGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDAW 217 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + ++ + +V+ GDFN +++ N+ D ++S + + C+ Sbjct: 218 VETQESEDIQYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHP----Y 273 Query: 253 NKIPIDY-FV--MDQNAYKFLIQ-ESFSEILYNEDDIKSRGKRLSDHCPISI 300 PID FV M N Y + Q +F+ + + LSDHC +S+ Sbjct: 274 YPAPIDLVFVGGMSDNKYDYTYQAHTFNNM--------APKAMLSDHCAVSL 317 >gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] Length = 319 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 38/302 (12%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+ LS + + + +RT DY L A LDADI+ QE+ A++KV Sbjct: 33 IASWNLQWLSS-DPIVIKNPPPQRTHVDYQQLANIATQLDADILAFQEVADRQAISKVLT 91 Query: 86 KNTWCIFYSTERLINHSKRDSNND---------IHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + +S H +R+S + A+R+ V L D Sbjct: 92 NDEYIFEFS------HRQRESQHSDKRYAQPWPQFVGFAIREGISYVRNADLQQL---DL 142 Query: 137 FSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R V++ + +G + +L +HLKS C+ ++T + +C L++Q + L+ W+ Sbjct: 143 WGNKSLRYGVDITLLNDGNPALRLLTVHLKSGCY-SQQQSTKNRACRHLNRQFEVLEQWV 201 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID---PND-SLIRFPKEKDSRCNANKNL 251 ++ +PF+I GDFNR++ +ND W+ +D P SL + + S+C + Sbjct: 202 DRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLDDGRPTGLSLYAATEGQKSQCRIKIHS 259 Query: 252 RNK-------IP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + K P ID+ V+D A +I SF E + + +K+ LSDHCPI++ Sbjct: 260 KRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFRETTTDVEVVKAFN--LSDHCPIALSL 317 Query: 303 DF 304 + Sbjct: 318 NL 319 >gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 283 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 34/290 (11%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 ++WN L++ K+ ++RT DY LRQ D++ QE+ S ++ +V PK Sbjct: 1 MTWNFQWLADHP-----KSDIQRTAKDYQALRQIFLTHQPDVLAFQEVNSAKSLYRVIPK 55 Query: 87 NTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKK-------NVRVLQQSYPLLGAKDSF 137 + + +F S+ + S+ D N I+ T AV+K ++ L LG + Sbjct: 56 DQYQVFMSSRTI---SEDDKFNGINQFTGFAVKKPIYAKQLNDISELSSPAASLGLTSHY 112 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWIT 196 + AV + ++++ I + ++HLKS CF L + +C L+ Q + ++ W+ Sbjct: 113 QQKLRYGAV-ISIKLDDNAITIANLHLKSGCFYPKQLSHNKKKACRTLNLQRKIVQQWVN 171 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ VPF++ GDFN +I+ + D+ + + N L + + C A N++ Sbjct: 172 NQQTKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNINGSCLAKVTKNNRV- 230 Query: 257 IDYFVMDQNAYKFLIQESFSE---ILYNEDDI-----KSRGKRLSDHCPI 298 Y+ YK LI FS IL + I + +LSDHCP+ Sbjct: 231 --YY----RQYKQLIDHGFSSVHFILNSAQQIQFAKHQVEQYQLSDHCPL 274 >gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] Length = 357 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L SWNI L+ + GV L ++ R ++Y +R L+ D+V LQEMGS + V Sbjct: 26 KLASWNIGNLASKPGVPLRGHA--RDEAEYQHIRDIFAKLEPDVVALQEMGSIGSARAVV 83 Query: 85 PKNTWCIFYSTERLINHSKR--DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + +F ER +N+S + +DI TAIA +K ++ + P L + A Sbjct: 84 GDSYNIVF--EERCMNNSSHCNEDIDDIFTAIAYKKSLGQLTEVQVPQLSVMHTSECANE 141 Query: 143 -----RRAVELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLSQQAQWLKDWI 195 R V + ++ + + I VL +HLK+ C + E + C+ L +QA L +WI Sbjct: 142 TPRPVRGGVGIQIQRDNETIVVLSVHLKASCKRNDNEAERDQADDCATLMKQADILSEWI 201 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ + ++AGDFNR++ L D + D+ ++F Sbjct: 202 KTERAAGKRVIVAGDFNRQL--LDRGDHVAAKLRAVDAGVQF 241 >gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329] Length = 293 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 39/305 (12%) Query: 5 YVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +V AL+ F + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 10 FVTALLIF---SSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDK 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + + I+ S N+ S+ + +T AVRK Sbjct: 61 TQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKD--- 116 Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 ++ S P A S +R + R A ++V N K ++ +L +HLK+ C S S Sbjct: 117 -IEVSDP---ADFSITRGNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNSR 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRF 237 C LSQQ + L W++++++ + + GDFN ++Y D W T+ + L+ Sbjct: 170 DCQTLSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTR 227 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + D + +NKN + ID+ ++ + ++ + L++ D+ +LS Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281 Query: 294 DHCPI 298 DHCP+ Sbjct: 282 DHCPV 286 >gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25] gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25] Length = 288 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 39/305 (12%) Query: 5 YVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +V AL+ F + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 5 FVTALLIF---SSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFIKLNQYVDK 55 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + + I+ S N+ S+ + +T AVRK Sbjct: 56 TQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKD--- 111 Query: 123 VLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSP 179 ++ S P A S +R+ + R A ++V N K ++ +L +HLK+ C S + Sbjct: 112 -IEVSDP---ADFSITRSNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNNR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRF 237 +C LSQQ + L W++++++ + + GDFN ++Y D W T+ + L+ Sbjct: 165 NCQTLSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTR 222 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + D + +NKN R + ID+ ++ + ++ + L++ D+ +LS Sbjct: 223 DTKADCKVRSNKNPRKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276 Query: 294 DHCPI 298 DHCP+ Sbjct: 277 DHCPV 281 >gi|109896633|ref|YP_659888.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] gi|109698914|gb|ABG38834.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 331 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 38/288 (13%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++V+WN +E RT+ D ++ Y L A ++ LQE+ S A+ VF Sbjct: 67 KVVTWN----TEHFAYPSNAGCKPRTSEDIAAIKAYIAGLGASVIALQEVASREALRLVF 122 Query: 85 PKNTWCIFYSTER-LINHSKRDSN---NDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSR 139 P++ W + S + R+S A A+ KK + +LQ Q LG + Sbjct: 123 PESDWTLVLSARADSPAYECRESGFTSTQQKVAFAI-KKGISILQVQQNAQLG----LQK 177 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G R + + V+ +L++HLKS CF+D + +C L+QQ L++W+ + Sbjct: 178 IGLRFGLAVTVDTPLGPTDILNVHLKSGCFVDDYATSDKAACQTLAQQVPVLEEWLAAHQ 237 Query: 200 ESLVPFVIAGDFNRKI----NYLGN---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 VP+++ GDFN ++ NYL + +D++ ID +R C+ R Sbjct: 238 TLGVPYMVLGDFNHRLASENNYLASRLTSDEYG--IDIATQALR-------GCHP----R 284 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 PID+ ++ + + N D+ LSDHC +S+ Sbjct: 285 YPEPIDHILLGGMQSTLIAASAHVHRYKNMDE----EAMLSDHCAVSL 328 >gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] Length = 252 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 23/260 (8%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAI 114 +++ + +DAD+V QE+ S +++KV + ++S + NHS+R T Sbjct: 1 MMQTVSSIIDADLVAFQEVDSEASLSKVLNPTAYDFYFSDRTKHFNHSRRSHQ---FTGW 57 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSL 173 AV+K V + Y LG SR R + V+ N + +L IHLKS CF + Sbjct: 58 AVKKGIKVVDHEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCFETPI 117 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---DP 230 + SC L Q + L WI + + F+IAGDFN +N N+ WK + Sbjct: 118 RR--NNSCKKLDHQIEALSVWINARLKLGQDFIIAGDFNHYLN--DKNEWVWKQLLLDVG 173 Query: 231 NDSLIRFPKEKDSRCNANK-NLRNK--------IPIDYFVMDQNAYKFLIQESFSEILYN 281 D+L++ K ++C A K N R K ID+ + + A L + Y+ Sbjct: 174 EDNLVKLTKGTPAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYS 233 Query: 282 EDDIKSRGKRLSDHCPISID 301 + + RLSDHCPI +D Sbjct: 234 YHAVATY--RLSDHCPIVVD 251 >gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] Length = 288 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 39/305 (12%) Query: 5 YVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +V AL+ F + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 5 FVTALLIF---SSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDK 55 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + + I+ S N+ S+ + +T AVRK Sbjct: 56 TQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKD--- 111 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSP 179 ++ S P A S +R ++ + +N + + +L +HLK+ C S S Sbjct: 112 -IEVSDP---ADFSITRGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRF 237 C LSQQ + L W++++++ + + GDFN ++Y D W T+ + L+ Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTR 222 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + D + +NKN + ID+ ++ + ++ + L++ D+ +LS Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 276 Query: 294 DHCPI 298 DHCP+ Sbjct: 277 DHCPV 281 >gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633] gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 293 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 39/305 (12%) Query: 5 YVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +V AL+ F + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 10 FVTALLIF---SSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDK 60 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + + I+ S N+ S+ + +T AVRK Sbjct: 61 TQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKD--- 116 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSP 179 ++ S P A S +R ++ + +N + + +L +HLK+ C S S Sbjct: 117 -IEVSDP---ADFSITRGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRF 237 C LSQQ + L W++++++ + + GDFN ++Y D W T+ + L+ Sbjct: 170 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTR 227 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + D + +NKN + ID+ ++ + ++ + L++ D+ +LS Sbjct: 228 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLS 281 Query: 294 DHCPI 298 DHCP+ Sbjct: 282 DHCPV 286 >gi|86148017|ref|ZP_01066320.1| Metal-dependent hydrolase [Vibrio sp. MED222] gi|85834241|gb|EAQ52396.1| Metal-dependent hydrolase [Vibrio sp. MED222] Length = 215 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + + + SWNI LS E V+ K S +R +D+ L QY ++L++D+V QE+ Sbjct: 16 SQAFGEPLTISSWNIEWLSTNEAVN--KFSDQRDQADFDKLEQYFQSLNSDVVAFQEVDD 73 Query: 77 YNAVAKVFPKNTWCIFYSTERL---INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 NA+ ++ + + I S L NH ++ N +T AVRK + +PL Sbjct: 74 INAIQRI-AGDQYKILMSDRALPENSNHQFKEVNQ--YTGFAVRKGIILTDYADFPL--- 127 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +S + + R A ++V+ + K I +L +HLK+ C S + CS L QAQ L Sbjct: 128 -ESGANSKLRFASYMVVKTDTKPIHMLSVHLKAGC---SGAYKSNRDCSRLKDQAQQLNK 183 Query: 194 WITQKKESLVPFVIAGDFNRKINY 217 WI Q++ + I GDFN ++Y Sbjct: 184 WIQQRERQGQDYAILGDFNHNLSY 207 >gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] Length = 287 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 42/312 (13%) Query: 7 LALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 4 LFVTLILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKTQ 57 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S A+ K N + I+ S N S R ++ + +T AVR Sbjct: 58 ADILAFQEVESVAAMQKAVG-NDFTIYLSDRS--NASNRHLQFNDTNQYTGFAVRN---- 110 Query: 123 VLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYS 178 +L D GN R A L++ N + + +L +HLK+ C S + Sbjct: 111 ----GVSVLDTPDFSITRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNN 163 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 C ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S Sbjct: 164 RDCKIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVT 221 Query: 239 KEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 K+ + C N NK + + ID+ ++ + L S + ++ D+ +L Sbjct: 222 KDTKAECKVRSNRNPNKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KL 275 Query: 293 SDHCPISIDYDF 304 SDHCP+S F Sbjct: 276 SDHCPVSTTLTF 287 >gi|254780996|ref|YP_003065409.1| hypothetical protein CLIBASIA_04485 [Candidatus Liberibacter asiaticus str. psy62] gi|254040673|gb|ACT57469.1| hypothetical protein CLIBASIA_04485 [Candidatus Liberibacter asiaticus str. psy62] Length = 109 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 18/109 (16%) Query: 84 FPKNTWCIFYS----------TERLINHSKRDSNN--------DIHTAIAVRKKNVRVLQ 125 P++ W IFYS + +N S D N+ DI+TAIA+RK RVLQ Sbjct: 1 MPEDKWYIFYSGCGKNPVWDSMKGCLNFSSYDDNSGNIDTDESDINTAIAIRKDVARVLQ 60 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 SYPL ++ R GNR+ VELL+EI+ +K+W+L++HLKS C + ++ Sbjct: 61 VSYPLPAPQEITPRMGNRKTVELLIEIDDQKVWLLNVHLKSSCVVKKIQ 109 >gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] Length = 292 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 24/280 (8%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 +WN+ LS S +K S +R DY L + ++++DI+ QE+ A+ KV + Sbjct: 27 AWNLEWLSSTPS-SKFKPS-QRYDQDYQSLHHHFSSMESDILAFQEVNDKQALTKVIGSD 84 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 F N + S+ + +T A+RK + + P + D + R A Sbjct: 85 YQFFFSHRSNADNQRHQFSDINQYTGFAIRKG---IAVKDMPDIKL-DRSPNSKLRFASY 140 Query: 148 LLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 +++ N ++ I L +HLK+ C S S +C L Q Q L WI +++++ +V Sbjct: 141 VMLHPNSQQPIHALSVHLKARC---SGAYNGSKACRTLKVQGQQLNKWIKEREKNNDAYV 197 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYF 260 I GDFN ++Y N D WK I K + C N NK + K ID+ Sbjct: 198 ILGDFNHNLSY--NGDWLWKGISQGTDATLATKMTKANCKVKSRNNPNKTHQFKSLIDHI 255 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ + L S + LY DD+ +R ++SDHCPIS+ Sbjct: 256 IVSSD----LGFHSPKQNLYKVDDVLNR--QMSDHCPISV 289 >gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] Length = 288 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 39/305 (12%) Query: 5 YVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 +V AL+ F + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 5 FVTALLIF---SSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDK 55 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K + + I+ S N+ S+ + +T AVRK Sbjct: 56 TQADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKD--- 111 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFCFLDSLENTYSP 179 ++ S P A S +R ++ + +N + + +L +HLK+ C S S Sbjct: 112 -IEVSDP---ADFSITRDNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--TIDPNDSLIRF 237 C LSQQ + L W++++++ + + GDFN ++Y D W T+ + L+ Sbjct: 165 DCQTLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTR 222 Query: 238 PKEKDSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + D + +NKN + ID+ ++ + ++ + L+ D+ +LS Sbjct: 223 DTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFISQDVLDY--KLS 276 Query: 294 DHCPI 298 DHCP+ Sbjct: 277 DHCPV 281 >gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] Length = 287 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 36/309 (11%) Query: 7 LALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 4 LFVTLILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKTQ 57 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR 122 ADI+ QE+ A+ K N + I+ S N S R ++ + +T AVR V Sbjct: 58 ADILAFQEVERAAAIQKAVG-NDFTIYLSDRS--NASNRHLQFNDTNQYTGFAVRN-GVS 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSC 181 VL + P S+ R A L++ N + + +L +HLK+ C S + C Sbjct: 114 VLDK--PDFSITRGNSKL--RFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRDC 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S K+ Sbjct: 167 KIVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKDT 224 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N NK + + ID+ + + L S + ++ D+ +LSDH Sbjct: 225 KAECKVRSNRNPNKTHQFRSVIDHIIASGD----LKASSGVQTVFKTQDVLDY--KLSDH 278 Query: 296 CPISIDYDF 304 CP+S F Sbjct: 279 CPVSTTLTF 287 >gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 287 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 36/309 (11%) Query: 7 LALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 4 LFVTTILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKTQ 57 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S A+ K N + I+ S N S R ++ + +T AVR V Sbjct: 58 ADILAFQEVESAAAIQKAVG-NDFTIYLSDR--ANASNRHLQFNDTNQYTGFAVRN-GVN 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSC 181 VL + P S+ R A L++ N + +L +HLK+ C S + C Sbjct: 114 VLDK--PDFSITRGNSKL--RFASYLVLNPNQDNETHLLSVHLKAGC---SGAYRNNRDC 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 167 KIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNT 224 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N NK + + ID+ ++ + L S + ++ D+ +LSDH Sbjct: 225 KAECKVRSNRNPNKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLSDH 278 Query: 296 CPISIDYDF 304 CP+S F Sbjct: 279 CPVSTTLSF 287 >gi|209809561|ref|YP_002265100.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011124|emb|CAQ81546.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 321 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 141/306 (46%), Gaps = 25/306 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLR 58 M ++ L F+++ ++ + V L +WN+ TL+ E +R D+ L Sbjct: 27 MNQRITRLLSFYMLIFSSFSSYAVTLSTWNMEWLTLNPSEKFK----PSERNEYDFRSLN 82 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y ++ I+ QE+ S A+ KV N + I+ S +R N K+ ++ + +T AV Sbjct: 83 NYFIKSNSQILAFQEVDSAEAIQKVV-GNEYKIYLS-DRSSNPKKQFNDINQYTGFAVHN 140 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + LL K + + R A ++ +N K + +L +HLKS CF +N Sbjct: 141 SISVTDPDDFSLLPDKKT---SKLRYAAYIIATVNEKPLHLLSVHLKSGCFGQKKKNY-- 195 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID---PNDSLI 235 +CS L QQ + + DWI ++ E ++I GDFN + + WK I P D + Sbjct: 196 -ACSTLEQQTEEVIDWINERNEKKQDYLILGDFNHTLAH--PRSWVWKEIQKGTPQDPYL 252 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYF--VMDQNAYKFLIQE-SFSEILYNEDDIKSRGKRL 292 ++ C + RN F ++D +++ ++LY+++D+K +L Sbjct: 253 -LTEDTKGNCTVKQWKRNWPKYTTFTRLIDHGISNLSLKKVEVEQLLYDQNDVKKF--QL 309 Query: 293 SDHCPI 298 +DHCPI Sbjct: 310 TDHCPI 315 >gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] Length = 295 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 140/295 (47%), Gaps = 29/295 (9%) Query: 16 CTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 C + A+K + +WN+ LS ++ +R DY+ L + ++D+DIV QE+ Sbjct: 18 CFSVHAEKTLNFSTWNLEWLSSTPSDKFPQS--QRLEKDYSALAAHFSSMDSDIVAFQEV 75 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ KV K + +F+ST R H+ + + +T AVR+ + ++S L Sbjct: 76 NDEKALRKVIGKQ-YRVFFSTRRNPEHAAHQFTAINQYTGFAVREGISVIEKESLQL--- 131 Query: 134 KDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ R+ R A +++ + I L +HLK+ C S ++ +C L +Q + L Sbjct: 132 -DTSHRSKLRFASYVVISPTSDTPIHALSVHLKARC---SGAFRHNDACRTLKRQGEALN 187 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------N 246 WI +++ ++I GDFN ++Y D W+ + + + +E + C N Sbjct: 188 HWIREREAHGERYMILGDFNHNMSY--PKDWLWEIVSQDSTAKLATRETKATCKVRSRNN 245 Query: 247 ANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +K + + ID+ + DQ + + Q + Y DD+ +LSDHCPI++ Sbjct: 246 PSKTHQFRSLIDHVITSDQISVSKIEQRN-----YKTDDLFR--YKLSDHCPITL 293 >gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] Length = 287 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 85/311 (27%), Positives = 133/311 (42%), Gaps = 40/311 (12%) Query: 7 LALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + S AQ V L SWNI LS G V RT D+ L Y Sbjct: 4 LFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVDKTQ 57 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR 122 ADI+ QE+ + AV K N + I+ S N S R ++ + +T AVR V Sbjct: 58 ADILAFQEVENAAAVQKAVG-NDFTIYLSDRS--NASNRHLQFNDTNQYTGFAVRN-GVS 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSP 179 VL + P S +R ++ + +N + +L +HLK+ C S + Sbjct: 114 VLDK--PDF----SITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 165 DCKIVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTK 222 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C N K + + ID+ ++ + L S + ++ D+ +LS Sbjct: 223 NTKAECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLS 276 Query: 294 DHCPISIDYDF 304 DHCP+S F Sbjct: 277 DHCPVSTTLTF 287 >gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01] gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01] Length = 287 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 40/311 (12%) Query: 7 LALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + S AQ V L SWNI LS G V RT D+ L Y Sbjct: 4 LFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVDKTQ 57 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVR 122 ADI+ QE+ S AV K N + I+ S N S R ++ + +T AVR V Sbjct: 58 ADILAFQEVESAAAVQKAVG-NDFTIYLSDRS--NASNRHLQFNDTNQYTGFAVRN-GVS 113 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSP 179 VL + P S +R ++ + +N + +L +HLK+ C S + Sbjct: 114 VLDK--PDF----SITRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNR 164 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 C ++ QQ Q L WI ++ + +V+ GDFN + Y G D W + N K Sbjct: 165 DCKIVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRG--DWLWDVLSDNTDAKLVTK 222 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C N K + + ID+ ++ + L S + ++ D+ +LS Sbjct: 223 NTKAECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLS 276 Query: 294 DHCPISIDYDF 304 DHCP+S F Sbjct: 277 DHCPVSTTLTF 287 >gi|260773808|ref|ZP_05882723.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] gi|260610769|gb|EEX35973.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] Length = 299 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 135/313 (43%), Gaps = 33/313 (10%) Query: 1 MIRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 MI +++ L L L+ AQ + + +WNI L+ + KR+ +D+ L Sbjct: 1 MITRFLSRLTLCVVLLSSFCGYAQPISITTWNIEWLTLNPDAP--DDKGKRSEADFQALS 58 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVR 117 ++ + D++ QE+ S A+ KV N + I S + H + S + +T A++ Sbjct: 59 RHFQRFRPDVLAFQEVDSIAAIQKVV-GNEYRIVLSERAMPQHQQHQFSKLNQYTGFAIK 117 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNR---RAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + D + RA ++ +L N +I +L +HLK+ C Sbjct: 118 STI------PFDTPADIDLYGRANHKLRFATYVILYPDNPNEIHLLSVHLKAGCAGAFHP 171 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--ND 232 NT SC +L Q + L W+ +++ F+I GDFN + Y G D WK I+ N Sbjct: 172 NT--DSCQILKTQGKALNRWLQERERHQHAFMILGDFNHNLAYQG--DWLWKIINQELNK 227 Query: 233 SLIRFPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + +E +RC R + ID+ ++ + +I++ D++ Sbjct: 228 PVQLATQETPARCQVRSRRQPDTLHRFRSLIDHMIVSSQVVY----QQIQQIVFPADEVL 283 Query: 287 SRGKRLSDHCPIS 299 RLSDHCPI+ Sbjct: 284 R--YRLSDHCPIN 294 >gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4] gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4] Length = 261 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 39/283 (13%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88 WN+ E +S+ + V RT+ D+ L Y ADI+ QE+ S A+ K N Sbjct: 1 WNM------EWLSIDGSKVLRTSQDFEKLSYYMAKTQADILAFQEVESITAIQKAVG-ND 53 Query: 89 WCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + I+ S N S R ++ + +T AVR V VL + P S+ R A Sbjct: 54 FTIYLSDRS--NSSYRHLQFNDTNQYTGFAVRN-GVNVLDK--PDFSITRGNSKL--RFA 106 Query: 146 VELLVEIN-GKKIWVLDIHLKSFCFLDSLENTY--SPSCSLLSQQAQWLKDWITQKKESL 202 L++ N +I +L +HLK+ C TY + C ++ QQ Q L W+ ++++ Sbjct: 107 SYLVLNPNQDNEIHLLSVHLKAGC-----SGTYRNNRDCKIVKQQGQALAKWMKAREDNK 161 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIP 256 +V+ GDFN + Y G D W+ + + K+ ++C N NK + + Sbjct: 162 QHYVVLGDFNHNLGYRG--DWLWRVLSDDTDAKLMTKDTQAQCKVRSNRNPNKTHQFRSM 219 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID+ ++ + + + S + +D + +LSDHCP+S Sbjct: 220 IDHIIV---SGQLMASPSVQTVFKTQDVLD---YKLSDHCPVS 256 >gi|59713463|ref|YP_206238.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] gi|59481711|gb|AAW87350.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] Length = 323 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 35/312 (11%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLR 58 M ++ L+F ++ + + + L +WN+ TLS E S R+ D+ L Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF----RSSDRSQQDFEQLN 82 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y ++ I+ QE+ S A+ K+ N + IF S +R +N + ++ + +T AV + Sbjct: 83 FYFSQSNSKILAFQEVDSKEAIQKIV-GNDYKIFIS-DRSLNSKLQFTDINQYTGFAVHQ 140 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENT 176 + + LL K + + R A ++ +I + + +L +HLKS C +N Sbjct: 141 SIPVIDPNDFSLLPKKKT---SKLRYATYIVADIGKPSRPVHLLSVHLKSGCLGQKKKNY 197 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--DSL 234 SCS L QQ + +WI ++ + ++I GDFN + + WK I N D+ Sbjct: 198 ---SCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKNNTSDTP 252 Query: 235 IRFPKEKDSRCNANKNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + ++ +RC K + P ID+ + + + F + + + E D+K Sbjct: 253 LLLTEDTKARCTV-KQWKRDWPKYTTFTRLIDHGITNISNRSFQVTQQ----QFIESDVK 307 Query: 287 SRGKRLSDHCPI 298 +LSDHCPI Sbjct: 308 KY--QLSDHCPI 317 >gi|197337596|ref|YP_002157871.1| metal-dependent hydrolase [Vibrio fischeri MJ11] gi|197314848|gb|ACH64297.1| metal-dependent hydrolase [Vibrio fischeri MJ11] Length = 323 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 37/313 (11%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLR 58 M ++ L+F ++ + + + L +WN+ TLS E S R+ D+ L Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKF----RSSDRSQQDFEQLN 82 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y ++ I+ QE+ S A+ ++ N + I+ S +R +N + ++ + +T AV + Sbjct: 83 FYFSQSNSKILAFQEVDSKEAIQRIV-GNDYKIYLS-DRSLNSKLQFTDINQYTGFAVHQ 140 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENT 176 + + LL K + + R A ++ +I + + +L +HLKS C +N Sbjct: 141 SIPVIDPNDFSLLPKKKT---SKLRYATYIVADIGNPSRPVHLLSVHLKSGCLGQKKKNY 197 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--DSL 234 SCS L QQ + +WI ++ + ++I GDFN + + WK I N D+ Sbjct: 198 ---SCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKSNTSDTP 252 Query: 235 IRFPKEKDSRCNANKNLRNKIP--------IDYFVMDQNAYKFLI-QESFSEILYNEDDI 285 + ++ +RC K + P ID+ + + + F + Q+ F+E D+ Sbjct: 253 LLLTEDTKARCTV-KQWKRDWPKYTTFTRLIDHGITNISNRSFQVTQQQFTEA-----DV 306 Query: 286 KSRGKRLSDHCPI 298 K +LSDHCPI Sbjct: 307 KKY--QLSDHCPI 317 >gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] Length = 296 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 135/308 (43%), Gaps = 34/308 (11%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K +LA++ + + + + +WN+ L+ ++ +R+ D+ L + Sbjct: 7 KAILAILLITKSTASFASSSLTVTAWNLEWLTSHPSDKFSES--QRSKQDFQALAGHFST 64 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNV 121 +D+D++ QE+ A+ KV + + +++S +R + + +DI +T AV K+++ Sbjct: 65 IDSDVLAFQEVNDQQALHKVIGDD-YRVYFS-DRASDAYMKQQFDDINQYTGFAV-KEDI 121 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 V + L D + R +++ NG + I L +HLK+ C S S Sbjct: 122 EVADKPDIQL---DQRKNSKLRFGTYIVLNPNGSQPIHALSVHLKARC---SGAYKNSRD 175 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C +L Q + L WI++++ + I GDFN ++Y N D W+ I + + K Sbjct: 176 CKILKSQGKVLNQWISERERQGQNYAILGDFNHNLSY--NGDWLWEVISHSSQAVLATKG 233 Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---GKR 291 + C N NK + + ID+ + + + N+D + Sbjct: 234 TPATCKVRSRKNPNKTHQFRSLIDHII---------VSPGLTTAQTNQDVFPTSLVLQHH 284 Query: 292 LSDHCPIS 299 LSDHCPIS Sbjct: 285 LSDHCPIS 292 >gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016] gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 297 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 39/312 (12%) Query: 4 KYVLALVF-----FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 K+ LAL F L+P AQ + SWN+ LS + ++ R D+ L Sbjct: 3 KHALALFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLA 60 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAV 116 Y + ++D++ QE+ A+ KV N +F ++R +R +DI +T A+ Sbjct: 61 MYFQKTNSDVLAFQEVNDLAAIKKVVGTNYQILF--SDRSNPRYQRFQFDDINQYTGFAI 118 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +K P D GN R A +++ ++ VL++HLK+ C S Sbjct: 119 KK--------GIPFRDVGDIQLNKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SG 167 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +C L ++Q L WI+Q++ + +++ GDFN + Y ND + Sbjct: 168 AYKGNDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAY--RNDWLMNELTSAGK 225 Query: 234 LIRFPKEKDSRCNA-NKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + ++ + C +K NK+ ID+ ++ + L + L+ +D+ Sbjct: 226 IHLLTEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEG----LSASQAEQKLFTSNDVLK 281 Query: 288 RGKRLSDHCPIS 299 +LSDHCP+S Sbjct: 282 Y--QLSDHCPVS 291 >gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] Length = 297 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 34/291 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + SWN+ LS + ++ R D+ L Y + ++D++ QE+ A Sbjct: 24 AAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAA 81 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + KV N +F ++R +R +DI +T A++K P D Sbjct: 82 IKKVVGTNYQILF--SDRSNPRYQRFQFDDINQYTGFAIKK--------GIPFRDVGDIQ 131 Query: 138 SRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 GN R A +++ +I VL++HLK+ C S + +C L ++Q L W Sbjct: 132 LNKGNSKLRFASYVIIGNTSNEIHVLNVHLKAGC---SGAYKGNDACRTLRLESQALGQW 188 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRN 253 I+Q++ + +++ GDFN + Y ND + + ++ + C +K N Sbjct: 189 ISQRQNNKQNYLVLGDFNHNLAY--RNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPN 246 Query: 254 KIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K+ ID+ ++ + L + L+ +D+ +LSDHCP+S Sbjct: 247 KVHSFRSLIDHIIVSEG----LSASQAEQKLFTSNDVLKY--QLSDHCPVS 291 >gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6] gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6] Length = 297 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 34/291 (11%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + SWN+ LS + ++ R D+ L Y + ++D++ QE+ A Sbjct: 24 AAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAA 81 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + KV N +F ++R +R +DI +T A++K P D Sbjct: 82 IKKVVGTNYQILF--SDRSNPRYQRFQFDDINQYTGFAIKK--------GIPFRDVGDIQ 131 Query: 138 SRAGN---RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 GN R A +++ ++ VL++HLK+ C S + +C L ++Q L W Sbjct: 132 LNKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYKGNDACRTLRLESQALGQW 188 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-NKNLRN 253 I+Q++ + +++ GDFN + Y ND + + ++ + C +K N Sbjct: 189 ISQRQSNKQTYLVLGDFNHNLAY--RNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPN 246 Query: 254 KIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K+ ID+ ++ + L + L+ +D+ +LSDHCP+S Sbjct: 247 KVHSFRSLIDHIIVSEG----LSASQAEQKLFTSNDVLKY--QLSDHCPVS 291 >gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] Length = 301 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 37/311 (11%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + L + L P S +WNI L+ + +R D+ L + + L Sbjct: 16 FSLVIGISLFPTLVSA---TTFTTWNIEWLTLNPSSKF--EASQRGKDDFLALARQFEVL 70 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIAVRKKNVR 122 ++ QE+ S A+ K+ N + I+ S +R + SK+ + I +T AV+K Sbjct: 71 SPSVLAFQEVDSQEAIRKIV-GNDYDIYLS-DRALPSSKQHQFSAINQYTGFAVKKGLSI 128 Query: 123 VLQQSYPL-LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 +PL G+K F+ A + + ++ K I +L +HLK+ C S + SC Sbjct: 129 KDAADFPLSTGSKLRFASA-------IKLNVDNKTINLLSVHLKAGC---SGKFVNQNSC 178 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-DSLIRFPKE 240 L +Q + + W+ Q ++ +++ GDFN + Y G D WKTI D+ R + Sbjct: 179 HTLKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSG--DWLWKTITNGLDTAPRLTSQ 236 Query: 241 KD-------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + SR N +K + + ID+ ++ + + + ++ ED +K ++S Sbjct: 237 QTKATCKVKSRKNNDKIHQFRSLIDHIIV---SPELRTSPAVQSLMPVEDVLK---HQMS 290 Query: 294 DHCPISID-YD 303 DHCP+SI+ YD Sbjct: 291 DHCPLSIELYD 301 >gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 303 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 35/313 (11%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K + L L+ C S A+ +R +WN+ L+ + L S R SD LLR+Y Sbjct: 6 KVLFYLFVGLIAC-ESQAEVIRYTTWNLQWLATPQHGKLI--SPNRGGSDLRLLRKYFIK 62 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ + ++KV + I + N + S+ + +T AV+K Sbjct: 63 TSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTGFAVKK----- 117 Query: 124 LQQSYPLLGAKDSF--SRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYS 178 S+ + KD R +R +E+ + + + +L +HLK+ C + E Sbjct: 118 ---SFKVRDHKDIQLDKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKNYQEKR-- 172 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------YLGNNDDFWKTIDPN 231 +C +L +Q + WI ++++ +++ GDFN +I YL + N Sbjct: 173 -NCRILKEQLININSWIREREKYQHDYIVLGDFNSQIADEAKWAWYLISKKTQAVLTSQN 231 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + K R + + K ID+ ++ +++ F + ++ + D+ R Sbjct: 232 TTAQCYVRSKTKRASV---FKYKSIIDHIIVS-SSHTFTTAK---QLPFKTKDV--RQYE 282 Query: 292 LSDHCPISIDYDF 304 LSDHCP+ I+ + Sbjct: 283 LSDHCPVIIEASY 295 >gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 45/315 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I+ L L + + + A+++R++SWN+ L+ + V R T D++ +R Sbjct: 4 IKPLKLILAYIALSPNVTTAEELRIMSWNMQWLNHHAS-----SPVLRDTDDFSQIRSII 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKN 120 + +D DI+ QE+GS A+ V P + I S+ +H + N + T A+R KN Sbjct: 59 EQVDPDILAFQEVGSLKAMTMVLPLKQYDILLSSR--ADHPRYTFPNTNQFTGFAIR-KN 115 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +R + P K + ++ G R L + ++I +L+IHLK+ C ++ S + Sbjct: 116 IRY--RELPDF-TKINLNKKGLRYGKNLKIWWQDQQIHLLNIHLKAGC----KQSKRSKA 168 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTID-PND 232 C L +Q + L W+ + E+ +++ GDFN + NN F+K + P Sbjct: 169 CRQLKKQLKLLSLWLKTRIENNHSYILLGDFNYPLYTSLNNKKEKQHNHWFFKQLGIPTT 228 Query: 233 SLIRFPKEKDSRCNANKNLRNK--------IPIDYFVMDQ-NAYKFLIQESFSEILYNED 283 +L K+ + + + +K PID+ + D+ N K E++ Y Sbjct: 229 AL----KQHKTSFSCQIKIHHKKSRLITYTQPIDHVISDKINISKL---ETYQ---YTNK 278 Query: 284 DIKSRGKRLSDHCPI 298 ++ S +LSDHCP+ Sbjct: 279 EMSS--NQLSDHCPL 291 >gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] Length = 264 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 23/260 (8%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 KRT+ D+ L ++ + +++D++ QE+ S A+ V + + I S H++ Sbjct: 13 KRTSEDFAALSKHFRTVNSDVLAFQEVDSMQAIQNVV-GSAYQIVLSDRAQPAHAQHQFK 71 Query: 108 N-DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + +T A+R L G + R A +L + + + L +HLK+ Sbjct: 72 DLNQYTGFAIRNTVPFSDPADVDLYGKRHHKLRFA---AYIVLYPDSPQPVHTLSVHLKA 128 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 C N SC L Q + L WI Q++ +VI GDFN + Y G D W+ Sbjct: 129 GCSGKFRAN--QTSCQTLLTQGKALNAWIKQREAKQQAYVILGDFNHNLAYRG--DWLWQ 184 Query: 227 T------IDPNDSLIRFPK--EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 T I+P + + P + SR N+ + + ID+ ++ L + ++ Sbjct: 185 TMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIISPT----LKASATQQV 240 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 + D+ LSDHCP+ Sbjct: 241 NFESQDVLRYA--LSDHCPL 258 >gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218] Length = 264 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 21/259 (8%) Query: 48 KRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 KRT+ D+ L ++ + +++D++ QE+ S A+ V + + + + + Sbjct: 13 KRTSEDFAALSKHFRTVNSDVLAFQEVDSVQAIQNVVGSAYQIVLSDRAQPAHEQHQFKD 72 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + +T AVR L G + R A +L + + + L +HLK+ Sbjct: 73 LNQYTGFAVRNTVPFSDPADVDLYGKRHHKLRFA---AYIVLYPDSPQPVHTLSVHLKAG 129 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 C N SC L Q + L WI Q++ +VI GDFN + Y G D W+T Sbjct: 130 CSGKFRAN--QTSCQTLLTQGKALNAWIKQRESKQQAYVILGDFNHNLAYRG--DWLWQT 185 Query: 228 ------IDPNDSLIRFPK--EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 I+P + + P + SR N+ + + ID+ ++ L ++ Sbjct: 186 MTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIVSPT----LKASDTQQVN 241 Query: 280 YNEDDIKSRGKRLSDHCPI 298 + D+ LSDHCP+ Sbjct: 242 FESQDVLRYA--LSDHCPL 258 >gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] Length = 232 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 26/245 (10%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + +D++ QE+ A+ KV K +F + + KR + + T +A++ + Sbjct: 1 MQSDVLAFQEVNDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHG---I 57 Query: 124 LQQSYP--LLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 Q+ P LL D S + R A ++++ N ++ I +L +HLK+ C N Sbjct: 58 SWQNMPDVLL---DQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARCSGAYKNNR---D 111 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL------ 234 C +L QQ + L WI +K+ + +VI GDFN ++Y ND W T+ ++ Sbjct: 112 CRILKQQGERLNQWINEKEVANQAYVILGDFNHNLSY--PNDWLWNTLTQSNRAQLATQR 169 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 R + SR NK + ID+ ++ + + ++ ++ +K +LSD Sbjct: 170 TRAECKVRSRKQPNKTHSFRSLIDHIIVSD---QIKLSAPKQDVYPSQQVLK---HQLSD 223 Query: 295 HCPIS 299 HCPI+ Sbjct: 224 HCPIT 228 >gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] Length = 139 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%) Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HLK+ C D+L + P+C+ L QQ L W+ + + F I GDFNR +L + Sbjct: 1 MHLKAGC-PDNLPHATRPTCATLWQQFAVLDAWVAIRTQHHEAFAIMGDFNR---HLTVH 56 Query: 222 DDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + T L+R P + + A+ ID+ ++ A + I S Sbjct: 57 DPLFLT------LLRIAPLDLVTAGTASPCQNGSYFIDHIILGGAARAWKIPNSLRVTPL 110 Query: 281 NEDDIKSRGKRLSDHCPISI 300 E+ G+ LSDHCP+SI Sbjct: 111 AEE----VGQTLSDHCPVSI 126 >gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 431 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%) Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF--LD----SLENTYSPS 180 S P AKD R A + + +NGKK+ L +HLKS C LD L++ + Sbjct: 194 SLPEAPAKDQV-----RPAYTVTLNLNGKKVRFLTVHLKSSCVSPLDRNPRRLDDASIEA 248 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 C+LL QQ + L+ + + FV+ GDFNR + + Sbjct: 249 CALLQQQVRPLEAAFETLGQGVDHFVVLGDFNRNLAH 285 >gi|116251927|ref|YP_767765.1| hypothetical protein RL2169 [Rhizobium leguminosarum bv. viciae 3841] gi|115256575|emb|CAK07661.1| hypothetical exported protein [Rhizobium leguminosarum bv. viciae 3841] Length = 417 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 34/210 (16%) Query: 27 VSWNINTLSEQEGVSLWK-NSVKRTTSDYT----LLRQYAKN-LDADIVFLQEMGSYNAV 80 +SWNI+ L + ++V T + Y L + +N + D++ QE+ AV Sbjct: 79 ISWNISVLPPCDVFKTPGFDTVPVTEAAYVKRSGQLTTFIENKIAPDVIAFQEVSGEQAV 138 Query: 81 AKVFPKNTW----CIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V P + C F S +RL K++ A+ ++ L S L K Sbjct: 139 RDVLPNDGADYLVCSFGSHKVQRLAFAWKKE----FGPAVECEVEDALSLSSS---LAEK 191 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF---------LDSLENTYSPSCSLLS 185 D R + L + I+GK LD+HLKS C LD P C L Sbjct: 192 DRV-----RPGLALALTIDGKLTRFLDVHLKSGCVSPFDNPPDALDGNAGDDDP-CITLQ 245 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 QQ L+ WI +K V+ GDFNR + Sbjct: 246 QQVVPLEKWIERKSADTNRVVVLGDFNRNV 275 >gi|319944723|ref|ZP_08018987.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] gi|319741972|gb|EFV94395.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] Length = 484 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/305 (22%), Positives = 114/305 (37%), Gaps = 82/305 (26%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + + DIV +QE+ +AV +V K W I + ER + I +AV Sbjct: 191 LAELVRTARPDIVLMQEITDADAVRQVLGKG-WTIHTTAERW-------NGGPISQNLAV 242 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAG--NRR-----AVELLVEINGKK------------- 156 R LQ+ P + +S +R+ RR AV L + + K Sbjct: 243 AWPTHRFLQE--PRVEVVESLARSSPEGRRTRPGLAVYLPLPVPEKPSGTPPKAARPAPT 300 Query: 157 IWVLDIHLKSFCFLDSLENTYS----------PSCSLLSQQAQWLKDWITQKKESLVPFV 206 + +L++HLK+ C L+ + S SC L Q L+ W+ ++ + + Sbjct: 301 LAILNVHLKAGCRQGRLDRSLSRQPTRQWRRLSSCQTLQSQVPALEGWLDRQMAAGHAVL 360 Query: 207 IAGDFNRKINY--------LGNNDDFWKTIDPNDSLIRF--------------------- 237 I+GDFNR + G+ I +D + R Sbjct: 361 ISGDFNRDLRQELRQGLPARGDGSPAAAPIRTSDEMRRVASVLPELDDDQPRGTRLTLVA 420 Query: 238 --PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL---IQESFSEILYNEDDIKSRGKRL 292 P K +RC+ + ID F++ N +L ++ +++ E + R Sbjct: 421 SGPYRKLARCHHH--------IDVFLLSHNLDAWLRTPPEDLRVQVVPFEAPLSLERPRP 472 Query: 293 SDHCP 297 SDHCP Sbjct: 473 SDHCP 477 >gi|218670459|ref|ZP_03520130.1| hypothetical protein RetlG_01772 [Rhizobium etli GR56] Length = 230 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R V L ++ + + VL +HLK+ C + E + C+ L +Q L +WI ++ Sbjct: 20 RGGVGLQIQRGNETVVVLSVHLKASCKRNDSEAERDQADDCATLMKQTDILSEWIRTERA 79 Query: 201 SLVPFVIAGDFNRKINYLGN 220 + ++AGDFNR++ G+ Sbjct: 80 AGKKVIVAGDFNRQLLDTGD 99 >gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] Length = 301 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 40/200 (20%) Query: 46 SVKRTTSDYTLLRQYAKNL--DADIVFLQEMGSYNAVAKVFPK-NTWCIFYSTERLINHS 102 S+ +T D + N+ D DIV LQE+ + ++ K+F + FY T ++ Sbjct: 21 SIGASTQDARINAMIKDNIFYDVDIVILQEVFNTHSAQKLFSGMRSLGFFYHTPVAAQYN 80 Query: 103 KR-----DSNN-------------DIHTAIAVRKKNVRVLQQSYPLLG----AKDSFSRA 140 + DSN+ +++ IA+ + ++ + Y L D FS Sbjct: 81 ESVLSYCDSNHCWNAKKGEWDMVQQVNSGIAIVSR-YPIVYREYQLFDDAGCGADRFSAK 139 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 G RAV +EI GK + V+ HL+S FC + S S + L+Q W + IT+ Sbjct: 140 GGVRAV---IEIEGKMLQVIGTHLQSDDNFCLMTSPS---SHRKAQLTQLINWAETSITE 193 Query: 198 KKESLVPFVIAGDFNRKINY 217 ++ ++ GD N INY Sbjct: 194 DRQIT---ILGGDLN--INY 208 >gi|332530427|ref|ZP_08406371.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624] gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624] Length = 475 Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 29/187 (15%) Query: 52 SDYTLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 S Y + Q+ + + A+ ++ LQE+ +AV ++ P N W + ST+ L + Sbjct: 133 SQYDIKLQHLRKMAAELAKGKINVLVLQEVFDEDAVRQILPPN-WEV-SSTKGLTGSPEI 190 Query: 105 DSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 A+A K N ++ +Y L + R R ++ ++ GK + L + Sbjct: 191 PQ----QLAVAYPKDNPARVRNVHAYGELSSVGP-GRHPVRPGLDFTADVAGKPVRFLGV 245 Query: 163 HLKSFC----FLDSLENTYSPS---------CSLLSQQAQWLKDWITQKKESLVPFVIAG 209 HLK+ C + L+ Y + C+ + Q L+ W+ ++ + FV+ G Sbjct: 246 HLKAGCRSADITNPLKRDYHSAEDFERQQAECNAMLAQVPVLERWVDERAAAKEEFVVLG 305 Query: 210 DFNRKIN 216 DFNR + Sbjct: 306 DFNRNLQ 312 >gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 313 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 3 RKYVLALVFFLVPCT--ASVAQKVRLVSWNI-NTLSEQEGV-SLWKNSVKRTTSDYTLLR 58 RK +LA +F V C A + + +WNI N L + ++ + ++ LR Sbjct: 4 RKSILAAIFVFVACVVFADTKDTLTVATWNIRNYLPVNRRIDGKFRPDYPKPEAEKIALR 63 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKV 83 + +DAD++ LQEMGS +A++ Sbjct: 64 AVIRQIDADVIALQEMGSGGHLAEL 88 >gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 262 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 36/197 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 K+R+V++NI+ +GV+ + R + R +DADIVFLQE+ N Sbjct: 3 KLRVVTYNIH-----KGVT----GIARRPRIQNV-RAGLHAMDADIVFLQEVQDRNDRLV 52 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD--- 135 A A P +T + +T+ HS N A+ + + +P+L +++ Sbjct: 53 AAALFDPDHTQLNYLATDSY-PHSVYGRN-----AVYEHGHHGNAILSRHPILMSENLDI 106 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R R + + ++NG + ++ +H F ++QA+ L + + Sbjct: 107 SDHRFEQRGLLHAVADVNGVEAHLICVHFGLFA-------------RSRARQAEALVERV 153 Query: 196 TQKKESLVPFVIAGDFN 212 S P VIAGDFN Sbjct: 154 RTVVPSTAPLVIAGDFN 170 >gi|218662538|ref|ZP_03518468.1| hypothetical protein RetlI_25420 [Rhizobium etli IE4771] Length = 212 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 31/120 (25%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNT----WC--IFYSTERLINHSKRDSNNDIHTAI 114 A+++ ADI+ QE+ AV +V P +C Y +RL+ K+ + AI Sbjct: 106 ARSIPADIIAFQEVSGEQAVREVLPNGGSDYDFCPVTGYKVQRLVIAWKKALGEKVSCAI 165 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGN------RRAVELLVEINGKKIWVLDIHLKSFC 168 +D+ S N R + L ++I+GK + ++D+HLKS C Sbjct: 166 -------------------EDALSLPANPDDKRPRPGLALTLKIDGKLLRIMDVHLKSSC 206 >gi|126180004|ref|YP_001047969.1| putative CoA-substrate-specific enzyme activase [Methanoculleus marisnigri JR1] gi|125862798|gb|ABN57987.1| putative CoA-substrate-specific enzyme activase [Methanoculleus marisnigri JR1] Length = 412 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L AK L DI L + + + K P N++CI + T+ L+N S+ + A A Sbjct: 284 LEMTAKRLGVDITELGPL-AMKGMGKNVPMNSYCIVFGTQSLVNALAAGSSREDVAAAAC 342 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 +V +Q + K+ G +E LV G+ Sbjct: 343 HSVAEQVFEQQLQEIDIKEPVIMVGGTSLIEGLVHAMGQ 381 >gi|118379737|ref|XP_001023034.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89304801|gb|EAS02789.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 345 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 31/183 (16%) Query: 65 DADIVFLQEM-------GSYNA---VAKVFPKNTWCIFYSTERL-INHS--KRDSNNDIH 111 DAD++ L E+ GSYN +A+ F K W YS E L +++S K I Sbjct: 112 DADVIILSEVARDCPQWGSYNGAEEIARAF-KMDWA--YSVEFLELDNSLFKLGYQCTIG 168 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--- 168 AI + ++Q+ + S RAG R A++ +E I ++ HL+S Sbjct: 169 NAILSNRPLSNIIQKQFKTQCCMFS-GRAGGRVAIKATIE--SYNITLISSHLESGTGFE 225 Query: 169 -FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 F+D++ +Q+Q L D I +E +I GDFN + F + Sbjct: 226 DFIDAMITR--------EKQSQELVDMIDPIEEENKLIIIGGDFNSPLRQFNKGKPFREY 277 Query: 228 IDP 230 DP Sbjct: 278 QDP 280 >gi|149373068|ref|ZP_01891973.1| argininosuccinate synthetase [unidentified eubacterium SCB49] gi|149354295|gb|EDM42863.1| argininosuccinate synthetase [unidentified eubacterium SCB49] Length = 397 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 10/87 (11%) Query: 16 CTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 C S+A++ V VS N +++E ++ +N+ K S Y KN+DA F Q Sbjct: 20 CAVSLAKEGYDVHAVSVNTGGFTQKEIKTIEENAYKMGVSTY-------KNIDAIATFYQ 72 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLI 99 ++ Y V NT+ + S ER+I Sbjct: 73 KVVKYLIFGNVLKNNTYPLSVSAERII 99 >gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] Length = 273 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 28/193 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWNI++L+ +L +S + S L KN DADI+ LQE Sbjct: 1 MKFISWNIDSLN----AALTSDSARAKLSRDVL--DTIKNEDADIIALQETKLPATGPSK 54 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 K F+ S RDS + + + KK ++V ++S+P +GA D+ G Sbjct: 55 KHKEKLFEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKV-KESFPEIGAPDTMDLEGR 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKK 199 +L + L + F+ + L + W D++ ++ Sbjct: 114 ----------------ILTLELDDYYFVQVYTPNAGGELNRLPLREIWDLKFADYL-EEL 156 Query: 200 ESLVPFVIAGDFN 212 + + P + GDFN Sbjct: 157 DKIKPVIATGDFN 169 >gi|196045391|ref|ZP_03112622.1| hypothetical protein BC03BB108_5293 [Bacillus cereus 03BB108] gi|196023598|gb|EDX62274.1| hypothetical protein BC03BB108_5293 [Bacillus cereus 03BB108] Length = 643 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 15/198 (7%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 LV + N L EQ + +N ++ T + T L+ Y K+ DA ++ ++ A F Sbjct: 189 LVEADKNHLQEQ--LVKVRNEIEDTNKEITGLKSYLKDKDA-----EDFNELSSKATRFK 241 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + +I +SK +SNN+ I ++K + Q + L K+ + RA Sbjct: 242 NEIEQRKLEKKSIIENSKANSNNENKMYIRLKKDLTEIANQIFDLQKQKNELQNSV--RA 299 Query: 146 VELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSC-SLLSQQAQWL-KDWITQKKESL 202 LL+E + ++ L+ ++ S +N P C S ++ Q Q + KD +T +K L Sbjct: 300 KRLLIEEYNLEKEEINATLEVNYKLAISEQNIECPLCNSTVANQIQEITKDSVTPEKTLL 359 Query: 203 VPFVIAGDFNRKINYLGN 220 I + N KIN + N Sbjct: 360 ---KIKKEINNKINLVNN 374 Searching..................................................done Results from round 2 >gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] Length = 304 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 304/304 (100%), Positives = 304/304 (100%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY Sbjct: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN Sbjct: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS Sbjct: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE Sbjct: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI Sbjct: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 Query: 301 DYDF 304 DYDF Sbjct: 301 DYDF 304 >gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 315 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 167/304 (54%), Positives = 218/304 (71%), Gaps = 8/304 (2%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++R L L F +P + AQ++R+ SWNINTLSE+ G+ L KNSV R +DY LLR+Y Sbjct: 17 LLRSVALVLFFCFIP-NENFAQRIRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRY 75 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 A+ L+ADIV LQEMGSY A+ +VFP++TW I YS H+ +HTAI RK Sbjct: 76 AERLNADIVCLQEMGSYAAIKRVFPEDTWEILYSGNDSDEHT-------VHTAIVARKGT 128 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V VL++SY + S+AG RR+VE+L E+NG KIW+LDIHLKSFCF+DSL++ Y+ S Sbjct: 129 VHVLEKSYLSMDTNKLDSKAGKRRSVEILFEVNGIKIWLLDIHLKSFCFVDSLKDAYTLS 188 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C L+ Q WL WI QKK S +PF+IAGDFNRKIN+ G+ND+ W I + LIR P + Sbjct: 189 CYTLNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNK 248 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K S CNA+K++R + PID+FVMDQNAYK+LI+ S+SE+ Y E+DIK RG RLSDHCPI+ Sbjct: 249 KRSWCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITT 308 Query: 301 DYDF 304 DY+F Sbjct: 309 DYNF 312 >gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] Length = 291 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 25/309 (8%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ L+ + ++A+ + + SWNI LS E V K S KR +D+ L +Y Sbjct: 1 MKRLQKWLMLGCLLSNQAIAEPLTISSWNIEWLSTNEAV--NKFSDKRDQADFDKLGRYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKN 120 ++L+AD+V QE+ NA+ +V + + I S L N + + + +T AVRK Sbjct: 59 QSLNADVVAFQEVDDVNAIQRV-AGDQYQILMSDRALPKNGNHQFKEVNQYTGFAVRKGV 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +PL ++ S + R A +++E K I +L +HLK+ C S + Sbjct: 118 ALTDYADFPL----ETTSNSKLRFASYIVIETETKPIHMLSVHLKAGC---SGAYKSNRD 170 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CS L +QAQ L WI Q++ + + I GDFN + Y + D WK + ++ Sbjct: 171 CSRLKEQAQQLNKWIKQRERNNEDYAILGDFNHNLAY--SRDWIWKELTQYTDAQLATRK 228 Query: 241 KDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C N + + ID+ V+ ++ L + ++ D+ +LSD Sbjct: 229 TRADCKVRSNRNNHRTHQFRSVIDHIVVSES----LNAAPAKQQVFKTQDVLDY--KLSD 282 Query: 295 HCPISIDYD 303 HCP+S + Sbjct: 283 HCPVSTTIN 291 >gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] Length = 291 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 25/308 (8%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + + + + SWNI LS E V K S +R +D+ L QY Sbjct: 1 MKRLQKWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAV--NKFSDQRDQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKN 120 ++L++D++ QE+ NA+ ++ + + I S L N + + + +T AVRK Sbjct: 59 QSLNSDVLAFQEVDDINAIQRI-AGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + +PL +S + + R A ++VE + K I +L +HLK+ C S + Sbjct: 118 ILTDYADFPL----ESGANSKLRFASYMVVETDTKPIHMLSVHLKAGC---SGAYKSNRD 170 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CS L QAQ L WI Q++ + I GDFN ++Y + D WK + N ++ Sbjct: 171 CSRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSY--SRDWMWKDLTQNADAQLATRK 228 Query: 241 KDSRCNANK------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C + + ID+ V+ ++ L + ++ D+ +LSD Sbjct: 229 TRADCKVRSNRNNHRTHQFRSVIDHIVVSKS----LDASPAKQKVFETQDVLDY--KLSD 282 Query: 295 HCPISIDY 302 HCP+S Sbjct: 283 HCPVSTTI 290 >gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] Length = 292 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 25/308 (8%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + A+ + + SWNI LS E V K S KR +D+ L QY Sbjct: 1 MKRLQKWIMLACLLSSQTFAEPLTISSWNIEWLSTNEAV--NKFSSKRNQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKN 120 ++LDAD+V QE+ N + ++ N + I S L N +++ + +T AVRK Sbjct: 59 QSLDADVVAFQEVDDVNDIQRI-TGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +PL + + + R A ++VE + I +L +HLK+ C S + Sbjct: 118 TLTDYADFPL----ERSANSKLRFASYMVVETDSNPIHMLSVHLKAGC---SGAYKSNRD 170 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 CS L QA+ L WI Q++ + I GDFN ++Y + D WK + N ++ Sbjct: 171 CSRLKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSY--SRDWMWKDMTQNTDAQLVTRK 228 Query: 241 KDSRCNANK------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C + + ID+ V+ ++ L + ++ D+ +LSD Sbjct: 229 TRADCKVRSNRNNHRTHQFRSVIDHIVVSKS----LDASPAKQKVFETQDVLDY--KLSD 282 Query: 295 HCPISIDY 302 HCP+S Sbjct: 283 HCPVSTTI 290 >gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] Length = 287 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 3 SLFVTLILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S A+ K N + I+ S N + ++ + +T AVR + Sbjct: 57 QADILAFQEVESVAAMQKAVG-NDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVL 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + R A L++ N + +L +HLK+ C S + C Sbjct: 116 DTPDFSI-----TRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRDCK 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S K+ Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKDTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N NK + + ID+ ++ + L S + ++ D+ +LSDHC Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P+S F Sbjct: 280 PVSTTLTF 287 >gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 287 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 3 SLFVTTILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER-LINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S A+ K N + I+ S N + ++ + +T AVR + Sbjct: 57 QADILAFQEVESAAAIQKAVG-NDFTIYLSDRANASNRHLQFNDTNQYTGFAVRNGVNVL 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + + R A L++ N + +L +HLK+ C S + C Sbjct: 116 DKPDFSI-----TRGNSKLRFASYLVLNPNQDNETHLLSVHLKAGC---SGAYRNNRDCK 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N NK + + ID+ ++ + L S + ++ D+ +LSDHC Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P+S F Sbjct: 280 PVSTTLSF 287 >gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] Length = 297 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 123/292 (42%), Gaps = 26/292 (8%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + SWN+ LS + ++ R D+ L Y + ++D++ QE+ A Sbjct: 24 AAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAA 81 Query: 80 VAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + KV N + I +S + + + + + +T A++K L + Sbjct: 82 IKKVVGTN-YQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQL-----NKG 135 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R A +++ +I VL++HLK+ C S + +C L ++Q L WI+Q+ Sbjct: 136 NSKLRFASYVIIGNTSNEIHVLNVHLKAGC---SGAYKGNDACRTLRLESQALGQWISQR 192 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLR 252 + + +++ GDFN + Y ND + + ++ + C NK Sbjct: 193 QNNKQNYLVLGDFNHNLAY--RNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHS 250 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ ++ + L + L+ +D+ +LSDHCP+S Sbjct: 251 FRSLIDHIIVSEG----LSASQAEQKLFTSNDVLKY--QLSDHCPVSTTVTL 296 >gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016] gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 297 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 132/313 (42%), Gaps = 31/313 (9%) Query: 4 KYVLALVF-----FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 K+ LAL F L+P AQ + SWN+ LS + ++ R D+ L Sbjct: 3 KHALALFFTGLVYLLLPTPLLAAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLA 60 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVR 117 Y + ++D++ QE+ A+ KV N + I +S + + + + + +T A++ Sbjct: 61 MYFQKTNSDVLAFQEVNDLAAIKKVVGTN-YQILFSDRSNPRYQRFQFDDINQYTGFAIK 119 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K L + + R A +++ ++ VL++HLK+ C S Sbjct: 120 KGIPFRDVGDIQL-----NKGNSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYKG 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + +C L ++Q L WI+Q++ + +++ GDFN + Y ND + + Sbjct: 172 NDACRTLRLESQALGQWISQRQSNKQTYLVLGDFNHNLAY--RNDWLMNELTSAGKIHLL 229 Query: 238 PKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ + C NK + ID+ ++ + L + L+ +D+ + Sbjct: 230 TEDTKANCKVRSKKQPNKVHSFRSLIDHIIVSEG----LSASQAEQKLFTSNDVLKY--Q 283 Query: 292 LSDHCPISIDYDF 304 LSDHCP+S Sbjct: 284 LSDHCPVSTTVTL 296 >gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6] gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6] Length = 297 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 26/292 (8%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + SWN+ LS + ++ R D+ L Y + ++D++ QE+ A Sbjct: 24 AAQPMTFTSWNMEWLSSTPSARVKES--HRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAA 81 Query: 80 VAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + KV N + I +S + + + + + +T A++K L + Sbjct: 82 IKKVVGTN-YQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQL-----NKG 135 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R A +++ ++ VL++HLK+ C S + +C L ++Q L WI+Q+ Sbjct: 136 NSKLRFASYVIIGNTSNELHVLNVHLKAGC---SGAYKGNDACRTLRLESQALGQWISQR 192 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLR 252 + + +++ GDFN + Y ND + + ++ + C NK Sbjct: 193 QSNKQTYLVLGDFNHNLAY--RNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHS 250 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ ++ + L + L+ +D+ +LSDHCP+S Sbjct: 251 FRSLIDHIIVSEG----LSASQAEQKLFTSNDVLKY--QLSDHCPVSTTVTL 296 >gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] Length = 287 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 131/308 (42%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S AQ + L SWNI LS G V RT D+ L Y Sbjct: 3 SLFVTLILLFSSLSFAQNSINLTSWNIEWLSIDGG------KVSRTPQDFEKLTHYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ A+ K N + I+ S N + ++ + +T AVR + Sbjct: 57 QADILAFQEVERAAAIQKAVG-NDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVL 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + + R A L++ N + +L +HLK+ C S + C Sbjct: 116 DKPDFSI-----TRGNSKLRFASYLVLNPNQENETHLLSVHLKAGC---SGAYRNNRDCK 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W I N S K+ Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQG--DWLWDVISDNTSAKLVTKDTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N NK + + ID+ + + L S + ++ D+ +LSDHC Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIASGD----LKASSGVQTVFKTQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P+S F Sbjct: 280 PVSTTLTF 287 >gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01] gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01] Length = 287 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S AQ V L SWNI LS G V RT D+ L Y Sbjct: 3 SLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K N + I+ S N + ++ + +T AVR + Sbjct: 57 QADILAFQEVESAAAVQKAVG-NDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVL 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + + R A L++ + + +L +HLK+ C S + C Sbjct: 116 DKPDFSI-----TRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDCK 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ QQ Q L WI ++ + +V+ GDFN + Y G D W + N K Sbjct: 168 IVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRG--DWLWDVLSDNTDAKLVTKNTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N K + + ID+ ++ + L S + ++ D+ +LSDHC Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P+S F Sbjct: 280 PVSTTLTF 287 >gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] Length = 287 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S AQ V L SWNI LS G V RT D+ L Y Sbjct: 3 SLFVTTILLFSSFSFAQNSVNLTSWNIEWLSIDGG------KVSRTPQDFEKLNHYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ + AV K N + I+ S N + ++ + +T AVR + Sbjct: 57 QADILAFQEVENAAAVQKAVG-NDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVL 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + + R A L++ + + +L +HLK+ C S + C Sbjct: 116 DKPDFSI-----TRGNSKLRFASYLVLNPDQDNETHLLSVHLKAGC---SGAYRNNRDCK 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ QQ Q L WI ++++ +V+ GDFN + Y G D W+ + N K Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRG--DWLWEVLSDNTDAKLVTKNTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N K + + ID+ ++ + L S + ++ D+ +LSDHC Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P+S F Sbjct: 280 PVSTTLTF 287 >gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] Length = 292 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 25/309 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + + + V L+ S A + +WN+ LS + +R DY L + Sbjct: 1 MQKTWPIISVLALLGSFNSYADTL-YSAWNLEWLSSTPSSKFKPS--QRYDQDYQSLHHH 57 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++++DI+ QE+ A+ KV + F N + S+ + +T A+RK Sbjct: 58 FSSMESDILAFQEVNDKQALTKVIGSDYQFFFSHRSNADNQRHQFSDINQYTGFAIRKGI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSP 179 + P + D + R A +++ N + I L +HLK+ C S S Sbjct: 118 AV---KDMPDI-KLDRSPNSKLRFASYVMLHPNSQQPIHALSVHLKARC---SGAYNGSK 170 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +C L Q Q L WI +++++ +VI GDFN ++Y N D WK I K Sbjct: 171 ACRTLKVQGQQLNKWIKEREKNNDAYVILGDFNHNLSY--NGDWLWKGISQGTDATLATK 228 Query: 240 EKDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C N NK + K ID+ ++ + L S + LY DD+ +R ++S Sbjct: 229 MTKANCKVKSRNNPNKTHQFKSLIDHIIVSSD----LGFHSPKQNLYKVDDVLNR--QMS 282 Query: 294 DHCPISIDY 302 DHCPIS+ Sbjct: 283 DHCPISVSI 291 >gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] Length = 293 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 25/307 (8%) Query: 3 RKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGV--SLWKNSVKRTTSDYTLL 57 R +V L+ + + A +RL +WN++ L+ + +L + R +D L Sbjct: 6 RPFVFLLMVLITGGHMPMMAHAMPLRLSTWNLDWLTTRPAGDRALPDDVRPRDMADIVRL 65 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 +YA L DI L+E+ + A++FP + I S + ++ TA+AVR Sbjct: 66 ARYAARLHPDIAALEEVDTPELAARLFPAPDYRILISGDGVVQK----------TALAVR 115 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + + R +++ V + VL IHLK+ C D + Sbjct: 116 GGLIVTRHPDVRAIDVYPPDAPRHLRSGLDVTVGDGRASLRVLVIHLKAGCR-DGAPDDR 174 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 P+C L +Q L DWI ++++ PF I GDFN + G D + N L+ Sbjct: 175 RPACRTLYRQVAALTDWIMERQDEGEPFAIMGDFNHML---GPGDAMLAMLGENGPLVAP 231 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S C ID+ V+ A ++L +S + Y E D + RLSDHCP Sbjct: 232 TVGLASPCWGGNYF-----IDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLSDHCP 285 Query: 298 ISIDYDF 304 +SI D Sbjct: 286 VSIGLDM 292 >gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family [Gluconacetobacter diazotrophicus PAl 5] gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] Length = 290 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 22/306 (7%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ--EGVSLWKNSVKRTTSDYTLLR 58 ++R++ A + + + + +++ +WN++ L+ + +L + R +D L Sbjct: 4 VLRQWACAGLVAVALAHPAAGRTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLA 63 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 YA LDADIV QE+ S A++FP + I + + ++ T +AV Sbjct: 64 VYAARLDADIVGFQEVDSPALAARLFPPGRYRIVMTADPVVQR----------TGLAVAT 113 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 L + R +++ + + VL +HLK+ C D+ + Sbjct: 114 SLTIERHPDLAALDVYPPTAPHPLRSGLDVTIGDGTANLRVLVVHLKAGCR-DAAPSDRR 172 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 +C L++Q L DW+ Q+++ VPF++ GDFNR + D F+ +D + L Sbjct: 173 AACLTLARQMAVLDDWVAQRQDEGVPFLVMGDFNRNL---TPGDPFFHLLDQDGPLTLAT 229 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + S C ID+ ++ A +L +S + Y+E D +R LSDHCP+ Sbjct: 230 AGRASPCWGGTYF-----IDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDHCPV 283 Query: 299 SIDYDF 304 S+ + Sbjct: 284 SVRLEM 289 >gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546] Length = 296 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 25/308 (8%) Query: 3 RKYVLALVFFLVPC-TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +K+ L+ A A+++ +WN+ LS ++ +R+TSDY L + Sbjct: 5 KKWSFFTALCLLFSFHAVGAEQISFSTWNLEWLSSSPSSKFEQS--QRSTSDYQALNHHF 62 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 N+ +D+V QE+ +A+ KV + F N + + + +T AVR Sbjct: 63 SNMQSDVVAFQEVNDADALVKVIGNDYQLFFSQRSESDNRRHQFDDINQYTGFAVRNGIA 122 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ L D+ S + R A +++ +G + + L +HLK+ C S S Sbjct: 123 VSNKRDLRL----DNSSNSKMRFASYIIIRPSGKQPVHALSVHLKARC---SGRFNSSRD 175 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C +L QQ + L WI Q++ + ++I GDFN + Y D W I + K Sbjct: 176 CKILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGYQ--RDWLWDEIAQDTQATLVSKS 233 Query: 241 KDSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + C N K + + ID+ ++ ++ L + +Y +D+ +LSD Sbjct: 234 TKAECKVRSRNNPRKTHQFRSLIDHIIVSES----LTASKPKQDVYPVEDVL--NHQLSD 287 Query: 295 HCPISIDY 302 HCP+S D Sbjct: 288 HCPLSSDI 295 >gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] Length = 295 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 26/294 (8%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + +WN+ LS ++ +R DY+ L + ++D+DIV QE+ Sbjct: 19 FSVHAEKTLNFSTWNLEWLSSTPSDKFPQS--QRLEKDYSALAAHFSSMDSDIVAFQEVN 76 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A+ KV K + +F+ST R H + + + + +T AVR+ + ++S L Sbjct: 77 DEKALRKVIGK-QYRVFFSTRRNPEHAAHQFTAINQYTGFAVREGISVIEKESLQL---- 131 Query: 135 DSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ R+ R A +++ + I L +HLK+ C S ++ +C L +Q + L Sbjct: 132 DTSHRSKLRFASYVVISPTSDTPIHALSVHLKARC---SGAFRHNDACRTLKRQGEALNH 188 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NA 247 WI +++ ++I GDFN ++Y D W+ + + + +E + C N Sbjct: 189 WIREREAHGERYMILGDFNHNMSY--PKDWLWEIVSQDSTAKLATRETKATCKVRSRNNP 246 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 +K + + ID+ + I + Y DD+ +LSDHCPI++ Sbjct: 247 SKTHQFRSLIDHVITSDQISVSKI----EQRNYKTDDL--FRYKLSDHCPITLT 294 >gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] Length = 296 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 132/308 (42%), Gaps = 26/308 (8%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K +LA++ + + + + +WN+ L+ ++ +R+ D+ L + Sbjct: 7 KAILAILLITKSTASFASSSLTVTAWNLEWLTSHPSDKFSES--QRSKQDFQALAGHFST 64 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVR 122 +D+D++ QE+ A+ KV + + +++S + ++ + + +T AV++ Sbjct: 65 IDSDVLAFQEVNDQQALHKVIG-DDYRVYFSDRASDAYMKQQFDDINQYTGFAVKEDIEV 123 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSC 181 + L D + R +++ NG + I L +HLK+ C S S C Sbjct: 124 ADKPDIQL----DQRKNSKLRFGTYIVLNPNGSQPIHALSVHLKARC---SGAYKNSRDC 176 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 +L Q + L WI++++ + I GDFN ++Y N D W+ I + + K Sbjct: 177 KILKSQGKVLNQWISERERQGQNYAILGDFNHNLSY--NGDWLWEVISHSSQAVLATKGT 234 Query: 242 DSRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C N NK + + ID+ ++ L ++ ++ + LSDH Sbjct: 235 PATCKVRSRKNPNKTHQFRSLIDHIIVSPG----LTTAQTNQDVFPTSLVL--QHHLSDH 288 Query: 296 CPISIDYD 303 CPIS + Sbjct: 289 CPISTQLN 296 >gi|260773808|ref|ZP_05882723.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] gi|260610769|gb|EEX35973.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14] Length = 299 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 79/310 (25%), Positives = 132/310 (42%), Gaps = 29/310 (9%) Query: 1 MIRKYV--LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 MI +++ L L L+ AQ + + +WNI L+ + KR+ +D+ L Sbjct: 1 MITRFLSRLTLCVVLLSSFCGYAQPISITTWNIEWLTLNPDA--PDDKGKRSEADFQALS 58 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVR 117 ++ + D++ QE+ S A+ KV N + I S + H + S + +T A++ Sbjct: 59 RHFQRFRPDVLAFQEVDSIAAIQKVVG-NEYRIVLSERAMPQHQQHQFSKLNQYTGFAIK 117 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENT 176 L G + R A +L N +I +L +HLK+ C NT Sbjct: 118 STIPFDTPADIDLYG----RANHKLRFATYVILYPDNPNEIHLLSVHLKAGCAGAFHPNT 173 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSL 234 SC +L Q + L W+ +++ F+I GDFN + Y G D WK I+ N + Sbjct: 174 --DSCQILKTQGKALNRWLQERERHQHAFMILGDFNHNLAYQG--DWLWKIINQELNKPV 229 Query: 235 IRFPKEKDSRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +E +RC R + ID+ ++ I +I++ D++ Sbjct: 230 QLATQETPARCQVRSRRQPDTLHRFRSLIDHMIVSSQVVYQQI----QQIVFPADEVLRY 285 Query: 289 GKRLSDHCPI 298 RLSDHCPI Sbjct: 286 --RLSDHCPI 293 >gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329] Length = 293 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 8 SLFVTALLIFSSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDKT 61 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 62 QADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVS 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + R A ++V N K ++ +L +HLK+ C S S C Sbjct: 121 DPADFSI-----TRGNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNSRDCQ 172 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 LSQQ + L W++++++ + + GDFN ++Y D W + + ++ Sbjct: 173 TLSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTRDTQ 230 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N +K + + ID+ ++ + ++ + L++ D+ +LSDHC Sbjct: 231 ADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLSDHC 284 Query: 297 PISIDYDF 304 P++ Sbjct: 285 PVNATVTL 292 >gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25] gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25] Length = 288 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 3 SLFVTALLIFSSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFIKLNQYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 57 QADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVS 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + S + R A ++V N K ++ +L +HLK+ C S + +C Sbjct: 116 DPADFSI-----TRSNSKLRFASYIVVNPNQKDELHLLSVHLKAGC---SGAYKNNRNCQ 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 LSQQ + L W++++++ + + GDFN ++Y D W + + ++ Sbjct: 168 TLSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTRDTK 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N K + + ID+ ++ + ++ + L++ D+ +LSDHC Sbjct: 226 ADCKVRSNKNPRKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P++ Sbjct: 280 PVNATVTL 287 >gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633] gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 293 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 8 SLFVTALLIFSSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDKT 61 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 62 QADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVS 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + R A ++V + K ++ +L +HLK+ C S S C Sbjct: 121 DPADFSI-----TRGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSRDCQ 172 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 LSQQ + L W++++++ + + GDFN ++Y D W + + ++ Sbjct: 173 TLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTRDTQ 230 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N +K + + ID+ ++ + ++ + L++ D+ +LSDHC Sbjct: 231 ADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLSDHC 284 Query: 297 PISIDYDF 304 P++ Sbjct: 285 PVNATVTL 292 >gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] Length = 288 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 3 SLFVTALLIFSSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 57 QADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVS 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + R A ++V + K ++ +L +HLK+ C S S C Sbjct: 116 DPADFSI-----TRGNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSRDCQ 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 LSQQ + L W++++++ + + GDFN ++Y D W + + ++ Sbjct: 168 TLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTRDTQ 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N +K + + ID+ ++ + ++ + L++ D+ +LSDHC Sbjct: 226 ADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFSSQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P++ Sbjct: 280 PVNATVTL 287 >gi|209809561|ref|YP_002265100.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011124|emb|CAQ81546.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 321 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 75/309 (24%), Positives = 137/309 (44%), Gaps = 27/309 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L F+++ ++ + V L +WN+ L+ + +R D+ L Y Sbjct: 27 MNQRITRLLSFYMLIFSSFSSYAVTLSTWNMEWLTLNPSEKFKPS--ERNEYDFRSLNNY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ KV N + I+ S +R N K+ ++ + +T AV Sbjct: 85 FIKSNSQILAFQEVDSAEAIQKVVG-NEYKIYLS-DRSSNPKKQFNDINQYTGFAVHNSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + LL K + + R A ++ +N K + +L +HLKS CF + + + Sbjct: 143 SVTDPDDFSLLPDKKT---SKLRYAAYIIATVNEKPLHLLSVHLKSGCFG---QKKKNYA 196 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--LIRFP 238 CS L QQ + + DWI ++ E ++I GDFN + + WK I Sbjct: 197 CSTLEQQTEEVIDWINERNEKKQDYLILGDFNHTLAH--PRSWVWKEIQKGTPQDPYLLT 254 Query: 239 KEKDSRCNANKNLRNKI-------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ C + RN ID+ + + + K ++LY+++D+K + Sbjct: 255 EDTKGNCTVKQWKRNWPKYTTFTRLIDHGISNLSLKKV----EVEQLLYDQNDVKKF--Q 308 Query: 292 LSDHCPISI 300 L+DHCPI Sbjct: 309 LTDHCPIIF 317 >gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] Length = 288 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 32/308 (10%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + L+ + S+AQ + L SWNI LS G V RT+ D+ L QY Sbjct: 3 SLFVTALLIFSSTSLAQNSINLTSWNIEWLSINGG------KVSRTSDDFVKLNQYVDKT 56 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ S AV K + + I+ S N+ + S+ + +T AVRK Sbjct: 57 QADIIAFQEVDSKAAVQKAVG-DGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVS 115 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + + R A ++V + K ++ +L +HLK+ C S S C Sbjct: 116 DPADFSI-----TRDNSKLRFASYIVVNPSQKDELHLLSVHLKAGC---SGAYKNSRDCQ 167 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 LSQQ + L W++++++ + + GDFN ++Y D W + + ++ Sbjct: 168 TLSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQ--RDWLWAIMTLGNDAQLVTRDTQ 225 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C N +K + + ID+ ++ + ++ + L+ D+ +LSDHC Sbjct: 226 ADCKVRSNKNPSKTHQFRSLIDHIIVSPQ----IKAKNAHQTLFISQDVLDY--KLSDHC 279 Query: 297 PISIDYDF 304 P++ Sbjct: 280 PVNATVTL 287 >gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H] gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H] Length = 280 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 24/300 (8%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L +F A ++L +WN++ L+ +L K+ D+ L Y ++L Sbjct: 2 LVGLFLAGSMGPVSAHTIKLSTWNMDWLTLRPSGDPALPKDVPGGEHRDFAKLAAYVRHL 61 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D+D+V +E A ++VF T+ I + + ++ +AVR+ + Sbjct: 62 DSDVVAFEETDGPLAASRVFSSTTYQIILTPDPVVQR----------VGVAVRRDLHVTV 111 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L + R +++ + + +L +HLK+ C+ D N SC L Sbjct: 112 NDELSALNVAGPGAPHQLRGGLDVTISDGHASLRLLVVHLKTGCW-DQPLNQRQHSCPTL 170 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 QQ + ++DW+ ++++ + + GDFNR++ +D + I+ + K S Sbjct: 171 YQQVRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKASP 227 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 C + ID+ ++ A +L+ +S + Y D + + LSDHCP+S+ + Sbjct: 228 CWGGEYF-----IDHILLGNAARDWLVPDSLRVMTYKNDTVPA---GLSDHCPVSVRLEM 279 >gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4] gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4] Length = 261 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 31/284 (10%) Query: 29 WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT 88 WN+ LS V RT+ D+ L Y ADI+ QE+ S A+ K N Sbjct: 1 WNMEWLSIDGS------KVLRTSQDFEKLSYYMAKTQADILAFQEVESITAIQKAVG-ND 53 Query: 89 WCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 + I+ S ++ + ++ + +T AVR + + + + + + R A Sbjct: 54 FTIYLSDRSNSSYRHLQFNDTNQYTGFAVRNGVNVLDKPDFSI-----TRGNSKLRFASY 108 Query: 148 LLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 L++ N +I +L +HLK+ C S + C ++ QQ Q L W+ ++++ +V Sbjct: 109 LVLNPNQDNEIHLLSVHLKAGC---SGTYRNNRDCKIVKQQGQALAKWMKAREDNKQHYV 165 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYF 260 + GDFN + Y G D W+ + + K+ ++C N NK + + ID+ Sbjct: 166 VLGDFNHNLGYRG--DWLWRVLSDDTDAKLMTKDTQAQCKVRSNRNPNKTHQFRSMIDHI 223 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ L+ + ++ D+ +LSDHCP+S F Sbjct: 224 IVSGQ----LMASPSVQTVFKTQDVLDY--KLSDHCPVSSVLSF 261 >gi|59713463|ref|YP_206238.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] gi|59481711|gb|AAW87350.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114] Length = 323 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 139/314 (44%), Gaps = 29/314 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L+F ++ + + + L +WN+ L+ S R+ D+ L Y Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKFR--SSDRSQQDFEQLNFY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ K+ + + IF S +R +N + ++ + +T AV + Sbjct: 85 FSQSNSKILAFQEVDSKEAIQKIVGND-YKIFIS-DRSLNSKLQFTDINQYTGFAVHQSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYS 178 + + LL K + + R A ++ +I + + +L +HLKS C + + Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGKPSRPVHLLSVHLKSGCLG---QKKKN 196 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIR 236 SCS L QQ + +WI ++ + ++I GDFN + + WK I N + + Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKNNTSDTPLL 254 Query: 237 FPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ +RC + R ID+ + + + F ++ + E D+K Sbjct: 255 LTEDTKARCTVKQWKRDWPKYTTFTRLIDHGITNISNRSF----QVTQQQFIESDVKKY- 309 Query: 290 KRLSDHCPISIDYD 303 +LSDHCPI + + Sbjct: 310 -QLSDHCPILFEMN 322 >gi|197337596|ref|YP_002157871.1| metal-dependent hydrolase [Vibrio fischeri MJ11] gi|197314848|gb|ACH64297.1| metal-dependent hydrolase [Vibrio fischeri MJ11] Length = 323 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 139/314 (44%), Gaps = 29/314 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M ++ L+F ++ + + + L +WN+ L+ S R+ D+ L Y Sbjct: 27 MNQRITRTLIFLMLTFSTFSSYAITLSTWNMEWLTLSPSEKFR--SSDRSQQDFEQLNFY 84 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ I+ QE+ S A+ ++ + + I+ S +R +N + ++ + +T AV + Sbjct: 85 FSQSNSKILAFQEVDSKEAIQRIVGND-YKIYLS-DRSLNSKLQFTDINQYTGFAVHQSI 142 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYS 178 + + LL K + + R A ++ +I + + +L +HLKS C + + Sbjct: 143 PVIDPNDFSLLPKKKT---SKLRYATYIVADIGNPSRPVHLLSVHLKSGCLG---QKKKN 196 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIR 236 SCS L QQ + +WI ++ + ++I GDFN + + WK I N + + Sbjct: 197 YSCSTLKQQTDEVIEWINSREANNEEYLILGDFNHTLAH--PRSWLWKNIKSNTSDTPLL 254 Query: 237 FPKEKDSRCNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ +RC + R ID+ + + + F ++ + E D+K Sbjct: 255 LTEDTKARCTVKQWKRDWPKYTTFTRLIDHGITNISNRSF----QVTQQQFTEADVKKY- 309 Query: 290 KRLSDHCPISIDYD 303 +LSDHCPI + + Sbjct: 310 -QLSDHCPILFEMN 322 >gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] Length = 283 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 22/300 (7%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQE--GVSLWKNSVKRTTSDYTLLRQYAKNL 64 L ++ L+P TA + +RL +WN+ L+ + +L + RT + L YA+ L Sbjct: 3 LPVITGLLPATAGAREDIRLSTWNLEWLTTRPQGDPALPADVTPRTVVELEHLAAYARRL 62 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI L+E+ S A++FP + IF + + ++ A+AVR + Sbjct: 63 APDIAALEEVDSPALAARLFPAPAYRIFITHDTVVQK----------VALAVRAELAVTR 112 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L + R +++ + + VL +HLK+ C DS ++ P+C L Sbjct: 113 HADVTALDVYAPDAPHHLRAGLDVSIGTGADSLRVLVVHLKAGCR-DSAPDSRRPACRTL 171 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +Q + DWI ++++ F + GDFNR + +D + T+ + L + S Sbjct: 172 LRQIAIVADWILERQDEGEAFAVLGDFNRLLA---PDDPAFHTLAASGPLALVTAGRASP 228 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 C ID+ ++ AY + +S +LY+ +D + RLSDHCP+S++ Sbjct: 229 CAQGSYF-----IDHILVGGPAYARVRPDSLRVMLYH-EDSGTEASRLSDHCPVSVNLSL 282 >gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] Length = 320 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 26/321 (8%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 +I + L F P + + + SWN+ L+ + + +RT +DY L Sbjct: 9 LICTWALVNGSFAKPNVPPLTTTLTVASWNLQWLASD-PIIIIPPPPQRTRADYQQLAHI 67 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVR 117 A LD DI+ QE+ A+ KV + + +S + N+ + A+R Sbjct: 68 ATQLDTDILAFQEVADRQAIEKVLTNDEYVFEFSRRQQESQHNNKRHTKPWPQFVGFAIR 127 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENT 176 K V L D R V++ + +GK + +L +HLKS C+ ++T Sbjct: 128 KGISYVRNADLHQL---DLRGNKSLRYGVDITLLNDGKAALRLLTVHLKSGCY-SQQQST 183 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--- 233 + +C L++Q + L+ W+ ++ +PF+I GDFNR++ +ND W+ +D Sbjct: 184 KNRACRQLNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGL 241 Query: 234 -LIRFPKEKDSRC---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 L + + S+C K ID+ V+D+ A + ++ SF E+ + + Sbjct: 242 SLYAATEGQKSQCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVE 301 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 +K+ LSDHCPI++ Sbjct: 302 VVKAF--NLSDHCPITLSLSL 320 >gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9] Length = 319 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 33/324 (10%) Query: 5 YVLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 + L L+ L S ++ + + SWN+ LS + + +RT DY L Sbjct: 5 FPLFLISALTLVNGSFSKPNIHTVNTLTIASWNLQWLSSDP-IVIKNPPPQRTHVDYQQL 63 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHS--KRDSNNDIHTAI 114 A LDADI+ QE+ A++KV + + +S R HS + Sbjct: 64 ANIATQLDADILAFQEVADRQAISKVLTNDEYIFEFSHRQRESQHSDKRYAQPWPQFVGF 123 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSL 173 A+R+ V L D + R V++ + +G + +L +HLKS C+ Sbjct: 124 AIREGISYVRNADLQQL---DLWGNKSLRYGVDITLLNDGNPALRLLTVHLKSGCY-SQQ 179 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 ++T + +C L++Q + L+ W+ ++ +PF+I GDFNR++ +ND W+ +D Sbjct: 180 QSTKNRACRHLNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLDDGRP 237 Query: 234 ----LIRFPKEKDSRC---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 L + + S+C + ID+ V+D A +I SF E Sbjct: 238 TGLSLYAATEGQKSQCRIKIHSKRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFRETTT 297 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + + +K+ LSDHCPI++ + Sbjct: 298 DVEVVKAF--NLSDHCPIALSLNL 319 >gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis CGDNIH1] Length = 358 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 47/319 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 P T +A +++ +WN++ L+E +L ++ RT D + L YA LDADI+ + Sbjct: 52 ASPVTTPLAGGLKIATWNLDWLTEPGSEATLPPDAPHRTEKDISRLSHYATLLDADIIAV 111 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S + + ++FP + + I S +++ AVR+ + L Sbjct: 112 QEVASPDILRRLFPPDRYVIHLSGDKVAQR----------VGFAVRRGLMVTANPDLSGL 161 Query: 132 GAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + R ++ V++ G ++ +L +HLK+ C D+ + P+C+ L Q Sbjct: 162 DVYGPHAAHHLRSGADITVDLPASSGGGRLRLLAVHLKAGCRRDAFAKSLRPACATLQAQ 221 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L WI ++K+ VPF+I GDFNR +L DD + ++ L + C+ Sbjct: 222 TIPLTGWIAERKQEGVPFLILGDFNR---WLHPGDDVLQKMEQVAPLTLLTVNRRDPCHH 278 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---------------- 291 ID+ + A ++ ES + Y + Sbjct: 279 GA-----SFIDHILAGGVARSWIDPESLRVMTYGPATTSKPEGQAMRYQLPWTRMPPGKL 333 Query: 292 --------LSDHCPISIDY 302 LSDHCP+SI Sbjct: 334 IQPDSSDGLSDHCPVSIRL 352 >gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] Length = 301 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 32/307 (10%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + L + L P S +WNI L+ + +R D+ L + + L Sbjct: 16 FSLVIGISLFPTLVSAT---TFTTWNIEWLTLNPSSKFEAS--QRGKDDFLALARQFEVL 70 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRV 123 ++ QE+ S A+ K+ N + I+ S L + + S + +T AV+K Sbjct: 71 SPSVLAFQEVDSQEAIRKIVG-NDYDIYLSDRALPSSKQHQFSAINQYTGFAVKKGLSIK 129 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +PL + + R A + + ++ K I +L +HLK+ C S + SC Sbjct: 130 DAADFPL------STGSKLRFASAIKLNVDNKTINLLSVHLKAGC---SGKFVNQNSCHT 180 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEK 241 L +Q + + W+ Q ++ +++ GDFN + Y G D WKTI + + ++ Sbjct: 181 LKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSG--DWLWKTITNGLDTAPRLTSQQT 238 Query: 242 DSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C K + + ID+ ++ + ++ ED +K ++SDH Sbjct: 239 KATCKVKSRKNNDKIHQFRSLIDHIIVSPELRT---SPAVQSLMPVEDVLK---HQMSDH 292 Query: 296 CPISIDY 302 CP+SI+ Sbjct: 293 CPLSIEL 299 >gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 288 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 26/298 (8%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 V+AL + +A++ +R+ +WN+ LSE K RT +DY +R+YA+ L Sbjct: 8 LVVALFGLALSPSAALTAPLRVATWNMEHLSEDGA----KGCKPRTDADYETMRRYAERL 63 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH---SKRDSNNDIHTAIAVRKKNV 121 +AD+V +E+ S A A+VF + + N + + A+RK Sbjct: 64 NADVVAFEEVESVKAAARVFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGFAIRKGIT 123 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L D R V++ + + +L +HLKS CF + + Sbjct: 124 VERAPDLTDLQLGD----PNLRGGVDVTIRAPGHAPLRLLAVHLKSGCF----AGDAAKA 175 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C+ L +Q L+ WI + V F + GDFNR++ +D W+ ID D Sbjct: 176 CATLMRQVPILERWIDARAAEGVRFAVLGDFNRRLARA--DDVVWREIDDADPPNADLSL 233 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + R ID+ V+D A + L E F E+ Y + G+R SDHCP+ Sbjct: 234 AEGSAGPKCDPRYSEFIDHIVLDARAARDL--EGFEELTY------AAGERGSDHCPV 283 >gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 303 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 25/308 (8%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K + L L+ C S A+ +R +WN+ L+ + L S R SD LLR+Y Sbjct: 6 KVLFYLFVGLIAC-ESQAEVIRYTTWNLQWLATPQHGKLI--SPNRGGSDLRLLRKYFIK 62 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 ADI+ QE+ + ++KV + I + N + S+ + +T AV+K Sbjct: 63 TSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTGFAVKKSFKVR 122 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + L D ++ R A + + + + + +L +HLK+ C + E C Sbjct: 123 DHKDIQL----DKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKNYQEKRN---CR 175 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +L +Q + WI ++++ +++ GDFN +I W I + + Sbjct: 176 ILKEQLININSWIREREKYQHDYIVLGDFNSQIA--DEAKWAWYLISKKTQAVLTSQNTT 233 Query: 243 SRCNANKN------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ++C + K ID+ ++ + + ++ + D+ R LSDHC Sbjct: 234 AQCYVRSKTKRASVFKYKSIIDHIIVSSSH----TFTTAKQLPFKTKDV--RQYELSDHC 287 Query: 297 PISIDYDF 304 P+ I+ + Sbjct: 288 PVIIEASY 295 >gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO 3283-01] gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 321 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 34/307 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSL-WKNSVKRTTSDYTLLRQYAK 62 ++ + L +A+ A ++L +WN++ L G + + RT++D + L YA Sbjct: 32 LVLVACCLSFTSATAADTLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISSLASYAA 91 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +L D+V LQE+ S ++FP + + S + ++ H TA+AVR Sbjct: 92 HLHGDVVALQEIESPAGAGQLFPFARYHLAISQDHILQH----------TALAVRADIPF 141 Query: 123 VLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + P + A D+++ A R +++ + NG+ + +L +HLK+ C D+L + Sbjct: 142 ---EQNPDVTALDAYATAPTTHHHLRSGLDITLHQNGQALRILVVHLKAGC-PDNLPHAS 197 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 P+C+ L QQ L DW+ + + F I GDFNR +L +D + T+ L Sbjct: 198 RPACTTLWQQFAALDDWVATRTQHHEAFAIMGDFNR---HLTVHDPLFLTLLRIAPLDLA 254 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S C ID+ ++ A + + S I E+ G+ LSDHCP Sbjct: 255 TAGMASPCQGGSYF-----IDHIILGGAARAWKVPNSLRVIPLAEET----GQNLSDHCP 305 Query: 298 ISIDYDF 304 +SI Sbjct: 306 VSISLRL 312 >gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14] Length = 287 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 29/294 (9%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +SWN+ LSEQ+ VKRT DYT+L+Q + DI+ QE+ S ++ ++ P Sbjct: 1 MSWNLQWLSEQQ------QEVKRTEQDYTMLKQVFLTYEPDILAFQEVDSAASLQRIVPN 54 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVR-----KKNVRVLQQSYPLLG-AKDSFSRA 140 + + IF S+ + N + + T AV+ KK+ + S P L + + + Sbjct: 55 DQYQIFMSSR-IKNKEDIFNGVNQFTGFAVKNYLTVKKHPDITTLSSPALALGEKQYYQQ 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + V +N I V+++HLKS CF L+N SC L+ Q L+ WI Q++ Sbjct: 114 KLRYGSAITVSLNQHDIIVVNVHLKSGCFTPKQLKNNRKKSCRTLNFQRTLLQQWIKQQQ 173 Query: 200 ESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRCNANK-------N 250 + PF++ GDFN I + N+ +F+ + + L C K Sbjct: 174 INKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNVKGNCLTKKIKNKKVYY 233 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K ID+ ++ S ++ Y+++ + + +LSDHCP+ F Sbjct: 234 RHYKELIDHGFSSEH----FNITSVQQLPYSKEQVSTY--QLSDHCPVIFSLSF 281 >gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218] Length = 264 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 25/273 (9%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 S + KRT+ D+ L ++ + +++D++ QE+ S A+ V + I S Sbjct: 5 ASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSVQAIQNVVGSA-YQIVLSDRAQP 63 Query: 100 NH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKI 157 H + + + +T AVR L G + R A +++ + + + Sbjct: 64 AHEQHQFKDLNQYTGFAVRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 L +HLK+ C N SC L Q + L WI Q++ +VI GDFN + Y Sbjct: 120 HTLSVHLKAGCSGKFRAN--QTSCQTLLTQGKALNAWIKQRESKQQAYVILGDFNHNLAY 177 Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKF 269 G D W+T+ + ++ + C N+ + + ID+ ++ Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIVSPT---- 231 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L ++ + D+ LSDHCP+ + Sbjct: 232 LKASDTQQVNFESQDVLRYA--LSDHCPLRSEL 262 >gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 301 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 49/313 (15%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A+++++ SWNI L E RT +DY L +YAK L+AD++ LQE Sbjct: 16 FSSFKTQAEEIKVASWNIAWLGSHE-------YNHRTDADYKKLAKYAKQLNADVIALQE 68 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLG 132 + S KVF N + ++ST+ + +A++K + V + Y L Sbjct: 69 VESEYWARKVFG-NDYDYYFSTKDWVQR----------VGVAIKKSQHFTVEAKEYKALD 117 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL--------------ENTYS 178 R +++ + NGK + +L +HLKS CF L E Sbjct: 118 V------GKVRHGMDITLTKNGKTLHLLAVHLKSGCFAAPLDSSSVKAMPSTSIKEEKRK 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY-----LGNNDDFWKTIDPND- 232 +C+ LS+Q L+ WI +++ GDFNR+ + + W+ ++ + Sbjct: 172 EACTKLSKQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGK 231 Query: 233 -SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 +L +S C K ID+ + A + I+ SF ++++ K + Sbjct: 232 ETLWTPTMTANSGCWGG---YYKEYIDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRN 288 Query: 292 LSDHCPISIDYDF 304 LSDHCPIS+ Sbjct: 289 LSDHCPISVKVKL 301 >gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] Length = 264 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 25/273 (9%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 S + KRT+ D+ L ++ + +++D++ QE+ S A+ V + I S Sbjct: 5 ASAPVDKSKRTSEDFAALSKHFRTVNSDVLAFQEVDSMQAIQNVVGSA-YQIVLSDRAQP 63 Query: 100 NH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKI 157 H + + + +T A+R L G + R A +++ + + + Sbjct: 64 AHAQHQFKDLNQYTGFAIRNTVPFSDPADVDLYGKRHH----KLRFAAYIVLYPDSPQPV 119 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 L +HLK+ C N SC L Q + L WI Q++ +VI GDFN + Y Sbjct: 120 HTLSVHLKAGCSGKFRAN--QTSCQTLLTQGKALNAWIKQREAKQQAYVILGDFNHNLAY 177 Query: 218 LGNNDDFWKTIDPNDSL--IRFPKEKDSRC------NANKNLRNKIPIDYFVMDQNAYKF 269 G D W+T+ + ++ + C N+ + + ID+ ++ Sbjct: 178 RG--DWLWQTMTQGTLIEPTLASRQTPATCKVRSRQQPNQLHQFRSLIDHIIISPT---- 231 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L + ++ + D+ LSDHCP+ + Sbjct: 232 LKASATQQVNFESQDVLRYA--LSDHCPLRSEL 262 >gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2] Length = 316 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 19/291 (6%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A + +WN+ L+ R+ S+ ++ YA +LDADI+ LQE+ Sbjct: 38 SIAPSINALSFATWNMEHLA----YPADTGCKPRSKSEIAAMQAYAASLDADIIALQEVA 93 Query: 76 SYNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNN---DIHTAIAVRKKNVRVLQQSYPLL 131 S A+A+VFP++ W I S +S R+S N A AVRK + Y L Sbjct: 94 SVKAIAQVFPEDQWQIIISKRADSEVYSCRESGNTSTQQKVAFAVRKSIPVLNTHHYDEL 153 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 G R + + V+ VL++HLKS CF+D E + +C ++QA WL Sbjct: 154 A----LGLNGLRYGLSVTVDTADGATEVLNVHLKSGCFVDDYEKSDRKACPTFAKQAVWL 209 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 W +K+ S P+++ GDFN ++ +N+ + + N + + ++ + + Sbjct: 210 DKWFERKEASKQPYIVMGDFNHRLA--TDNNRLMQELANNSNGAASTLKHITQNVVSCHP 267 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 R PID+ + I + ++ Y D KS LSDHC ++ Sbjct: 268 RYPAPIDHQFAGG--FSQAIPTNV-QMRYFAD--KSETAMLSDHCAVTFTL 313 >gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 406 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 45/316 (14%) Query: 4 KYVLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 V+AL L C S + + L +WN++ L+ ++G + RT +DY Sbjct: 16 SVVIALAAGLSACGFSTDRTPKREVGDIELATWNLSWLASEDGA----GTNPRTEADYAR 71 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LR YA LDAD++ LQE+ A +VF + +++R S A Sbjct: 72 LRTYAARLDADVIALQEVADEFAARRVFDPTVYDFAIASKRGAQRS----------GFAY 121 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN------GKKIWVLDIHLKSFCFL 170 ++ L G R V++ +++ +++ +L +HLKS CF Sbjct: 122 KRDLRVRRHADLAALDV------GGLRPGVDIELDLGRGADGTPRRLRLLALHLKSGCFD 175 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 DSL + +C LS+Q L+ WI + VPF + GDFNR++N D W+ ID Sbjct: 176 DSLRKRSN-ACRKLSRQLPQLEGWIDARAREGVPFAVLGDFNRRMN---ARDALWREIDD 231 Query: 231 NDS----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + L + + SRC K R ID+ +D +A +L+ SF +++Y++ D Sbjct: 232 AEPAAADLTLVTEGQRSRCWKGKYPRF---IDHIALDLHASAWLVPNSFEQLVYSDSDT- 287 Query: 287 SRGKRLSDHCPISIDY 302 + + LSDHCPIS+ Sbjct: 288 AHARALSDHCPISVRL 303 >gi|86148017|ref|ZP_01066320.1| Metal-dependent hydrolase [Vibrio sp. MED222] gi|85834241|gb|EAQ52396.1| Metal-dependent hydrolase [Vibrio sp. MED222] Length = 215 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ ++ + + + + + + SWNI LS E V K S +R +D+ L QY Sbjct: 1 MKRLQNWIMLGCLLSSQAFGEPLTISSWNIEWLSTNEAV--NKFSDQRDQADFDKLEQYF 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKN 120 ++L++D+V QE+ NA+ ++ + + I S L N + + + +T AVRK Sbjct: 59 QSLNSDVVAFQEVDDINAIQRI-AGDQYKILMSDRALPENSNHQFKEVNQYTGFAVRKGI 117 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + +PL +S + + R A ++V+ + K I +L +HLK+ C S + Sbjct: 118 ILTDYADFPL----ESGANSKLRFASYMVVKTDTKPIHMLSVHLKAGC---SGAYKSNRD 170 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 CS L QAQ L WI Q++ + I GDFN ++Y Sbjct: 171 CSRLKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYS 208 >gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 442 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 117/314 (37%), Gaps = 37/314 (11%) Query: 3 RKYVLALVFFLVPCTASV-------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 R VLA + C A +R+ +WN L+ G R + Sbjct: 150 RILVLATALLVSACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGA----GCFPRDEAALD 205 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS----KRDSNND-- 109 L+ Y +DADI LQE+ A+A+VF + W RD Sbjct: 206 LIADYITRVDADIWLLQEVDGDGALARVFG-DGWTFHVEQRAGGETYPLCRGRDDGTRLR 264 Query: 110 -IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +TAIAVR + P L A D R V + + ++ +HL S C Sbjct: 265 AQNTAIAVRDG---ITHDRLPDLAALDLTGEGRTRYGVAITL-PGPVPTDIMSVHLTSGC 320 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 F S C L QA L+ WI Q+ + ++ GDFNR++ +D W + Sbjct: 321 F----SGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLE--AEDDPVWTGL 374 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + + + R + ID+ ++ A ++ SF E Y+ Sbjct: 375 NDGTPAGLHIAGAGTG--PSCDPRYREFIDFLLLSDTALTRMVAGSFRETTYDTP----- 427 Query: 289 GKRLSDHCPISIDY 302 R SDHCPIS+ Sbjct: 428 -ARPSDHCPISLSI 440 >gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999] Length = 321 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 22/287 (7%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ + +WN+ L+ + RT SD +R+Y N+DAD+ LQE+ S AV Sbjct: 50 QLTVATWNVEHLA----YPINTGCKPRTESDINAMREYVNNVDADVFALQEVASEQAVRL 105 Query: 83 VFPKNTWCIFYSTERLIN-HSKRDSN---NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +FP +TW + S + R S A AV+ + LG + Sbjct: 106 LFPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSELG----LN 161 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G R +EL ++ I +L++H+KS CF+D+ + SC +QQA L W+ + Sbjct: 162 NPGLRYGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDAWVETQ 221 Query: 199 KESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + +V+ GDFN +++ N+ D ++S + + C+ P Sbjct: 222 ESEDIQYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHP----YYPAP 277 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + + ++ +N + LSDHC +S+ + Sbjct: 278 IDLVFVGGMSDNK-YDYTYQAHTFNN---MAPKAMLSDHCAVSLQIE 320 >gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 283 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 28/293 (9%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 ++WN L++ K+ ++RT DY LRQ D++ QE+ S ++ +V PK Sbjct: 1 MTWNFQWLADHP-----KSDIQRTAKDYQALRQIFLTHQPDVLAFQEVNSAKSLYRVIPK 55 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-------NVRVLQQSYPLLGAKDSFSR 139 + + +F S+ + K + + T AV+K ++ L LG + + Sbjct: 56 DQYQVFMSSRTISEDDK-FNGINQFTGFAVKKPIYAKQLNDISELSSPAASLGLTSHYQQ 114 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCF-LDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + ++++ I + ++HLKS CF L + +C L+ Q + ++ W+ + Sbjct: 115 -KLRYGAVISIKLDDNAITIANLHLKSGCFYPKQLSHNKKKACRTLNLQRKIVQQWVNNQ 173 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-------NL 251 + VPF++ GDFN +I+ + D+ + + N L + + C A Sbjct: 174 QTKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNINGSCLAKVTKNNRVYYR 233 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K ID+ + I S +I + + + +LSDHCP+ + Sbjct: 234 QYKQLIDHGFSSVH----FILNSAQQIQFAKHQV--EQYQLSDHCPLLFNLTL 280 >gi|109896633|ref|YP_659888.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] gi|109698914|gb|ABG38834.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 331 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 22/288 (7%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 S ++V+WN +E RT+ D ++ Y L A ++ LQE+ S Sbjct: 59 NTSGMDGFKVVTWN----TEHFAYPSNAGCKPRTSEDIAAIKAYIAGLGASVIALQEVAS 114 Query: 77 YNAVAKVFPKNTWCIFYSTER-LINHSKRDSN---NDIHTAIAVRKKNVRVLQQSYPLLG 132 A+ VFP++ W + S + R+S A A++K + Q LG Sbjct: 115 REALRLVFPESDWTLVLSARADSPAYECRESGFTSTQQKVAFAIKKGISILQVQQNAQLG 174 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + G R + + V+ +L++HLKS CF+D + +C L+QQ L+ Sbjct: 175 LQKI----GLRFGLAVTVDTPLGPTDILNVHLKSGCFVDDYATSDKAACQTLAQQVPVLE 230 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +W+ + VP+++ GDFN ++ N+ + ++ I + C+ R Sbjct: 231 EWLAAHQTLGVPYMVLGDFNHRLA--SENNYLASRLTSDEYGIDIATQALRGCHP----R 284 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 PID+ ++ + + N D+ LSDHC +S+ Sbjct: 285 YPEPIDHILLGGMQSTLIAASAHVHRYKNMDE----EAMLSDHCAVSL 328 >gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] Length = 231 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 117/235 (49%), Positives = 166/235 (70%), Gaps = 9/235 (3%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +AQ++R+ SWNIN LSE+ GV+L+KNSV R +DY LL++YA+ LDADIV LQE+GSY A Sbjct: 3 LAQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEA 62 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + +VFP + W I YS H+ +HTAI +RK + +LQ+SY + + S+ Sbjct: 63 IKRVFPNDKWDILYSGSNTDKHA-------MHTAIVIRKGAIHLLQKSYLPMDTEGLDSK 115 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 AG RRAVE+L E++G+KIW+LDIHLKSFCFLDS+E++Y SC +L+ QA WLK W+ QK Sbjct: 116 AGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKN 175 Query: 200 ESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +PF+IAGDFNRKIN+ + D+ W+ I+ +++L+R P +K+ K L+ Sbjct: 176 NLNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHKKNHNAIRTKILK 230 >gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] Length = 252 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAI 114 +++ + +DAD+V QE+ S +++KV + ++S + NHS+R T Sbjct: 1 MMQTVSSIIDADLVAFQEVDSEASLSKVLNPTAYDFYFSDRTKHFNHSRRSH---QFTGW 57 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSL 173 AV+K V + Y LG SR R + V+ N + +L IHLKS CF + Sbjct: 58 AVKKGIKVVDHEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCFETPI 117 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI---DP 230 + SC L Q + L WI + + F+IAGDFN +N N+ WK + Sbjct: 118 --RRNNSCKKLDHQIEALSVWINARLKLGQDFIIAGDFNHYLN--DKNEWVWKQLLLDVG 173 Query: 231 NDSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D+L++ K ++C A K + ID+ + + A L + Y+ Sbjct: 174 EDNLVKLTKGTPAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYS 233 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + + RLSDHCPI +D Sbjct: 234 YHAVATY--RLSDHCPIVVDL 252 >gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] Length = 232 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 22/246 (8%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + +D++ QE+ A+ KV K +F + + KR + + T +A++ Sbjct: 1 MQSDVLAFQEVNDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHGIS-- 58 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCS 182 Q+ P + D S + R A ++++ N + I +L +HLK+ C S + C Sbjct: 59 -WQNMPDV-LLDQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARC---SGAYKNNRDCR 113 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +L QQ + L WI +K+ + +VI GDFN ++Y ND W T+ ++ + Sbjct: 114 ILKQQGERLNQWINEKEVANQAYVILGDFNHNLSY--PNDWLWNTLTQSNRAQLATQRTR 171 Query: 243 SRC------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + C NK + ID+ ++ + + +Y + +LSDHC Sbjct: 172 AECKVRSRKQPNKTHSFRSLIDHIIVSDQIKL----SAPKQDVYPSQQVLK--HQLSDHC 225 Query: 297 PISIDY 302 PI+ Sbjct: 226 PITAQL 231 >gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 35/310 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 I+ L L + + + A+++R++SWN+ L+ + V R T D++ +R Sbjct: 4 IKPLKLILAYIALSPNVTTAEELRIMSWNMQWLNHHAS-----SPVLRDTDDFSQIRSII 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + +D DI+ QE+GS A+ V P + I S+ + N + T A+RK Sbjct: 59 EQVDPDILAFQEVGSLKAMTMVLPLKQYDILLSSR-ADHPRYTFPNTNQFTGFAIRKN-- 115 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + P K + ++ G R L + ++I +L+IHLK+ C ++ S +C Sbjct: 116 -IRYRELPDF-TKINLNKKGLRYGKNLKIWWQDQQIHLLNIHLKAGC----KQSKRSKAC 169 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------DFWKTIDPNDSL 234 L +Q + L W+ + E+ +++ GDFN + NN F+K + + Sbjct: 170 RQLKKQLKLLSLWLKTRIENNHSYILLGDFNYPLYTSLNNKKEKQHNHWFFKQLGIPTTA 229 Query: 235 IRFPKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ++ + C + + PID+ + D+ L Y ++ S Sbjct: 230 LKQ-HKTSFSCQIKIHHKKSRLITYTQPIDHVISDKINISKL-----ETYQYTNKEMSS- 282 Query: 289 GKRLSDHCPI 298 +LSDHCP+ Sbjct: 283 -NQLSDHCPL 291 >gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] Length = 357 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 134/336 (39%), Gaps = 63/336 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L SWNI L+ + GV L ++ R ++Y +R L+ D+V LQEMGS + V Sbjct: 26 KLASWNIGNLASKPGVPLRGHA--RDEAEYQHIRDIFAKLEPDVVALQEMGSIGSARAVV 83 Query: 85 PKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-- 141 +++ I + + N S + +DI TAIA +K ++ + P L + A Sbjct: 84 G-DSYNIVFEERCMNNSSHCNEDIDDIFTAIAYKKSLGQLTEVQVPQLSVMHTSECANET 142 Query: 142 ---NRRAVELLVEINGKKIWVLDIHLKSFCFL--DSLENTYSPSCSLLSQQAQWLKDWIT 196 R V + ++ + + I VL +HLK+ C + E + C+ L +QA L +WI Sbjct: 143 PRPVRGGVGIQIQRDNETIVVLSVHLKASCKRNDNEAERDQADDCATLMKQADILSEWIK 202 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR-------------------- 236 ++ + ++AGDFNR++ L D + D+ ++ Sbjct: 203 TERAAGKRVIVAGDFNRQL--LDRGDHVAAKLRAVDAGVQFYPTSRECWASFPNRGAAII 260 Query: 237 ------FPKEKDSRCNANKN-LRNKIPIDYFVMDQNAYKFLIQES-------FSEILYNE 282 FP+ + ++ IDYFV+ A + I Sbjct: 261 AAANQKFPEIAAAGGRPLPYSPKSNSKIDYFVVSGPAPQTPISSGQYAMGGEAKTTELAT 320 Query: 283 DDIKS----------------RGKRLSDHCPISIDY 302 D +K+ SDHCPIS+ Sbjct: 321 DYLKTCEGSPNKFEDGSVLTFSEVEPSDHCPISMSL 356 >gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] Length = 139 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 13/143 (9%) Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HLK+ C D+L + P+C+ L QQ L W+ + + F I GDFNR +L + Sbjct: 1 MHLKAGC-PDNLPHATRPTCATLWQQFAVLDAWVAIRTQHHEAFAIMGDFNR---HLTVH 56 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + T+ L S C ID+ ++ A + I S Sbjct: 57 DPLFLTLLRIAPLDLVTAGTASPCQNGSYF-----IDHIILGGAARAWKIPNSLRVTPLA 111 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 E+ G+ LSDHCP+SI Sbjct: 112 EEV----GQTLSDHCPVSITLQL 130 >gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter asiaticus str. psy62] Length = 125 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 2/122 (1%) Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +LSQQ +WLK W QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+ LIRFP+EK+ Sbjct: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 S CN K RNK +DYFV+D++ FLI SFS + Y++ D+ +R +LS HCP++I+Y Sbjct: 61 STCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118 Query: 303 DF 304 DF Sbjct: 119 DF 120 >gi|116251927|ref|YP_767765.1| hypothetical protein RL2169 [Rhizobium leguminosarum bv. viciae 3841] gi|115256575|emb|CAK07661.1| hypothetical exported protein [Rhizobium leguminosarum bv. viciae 3841] Length = 417 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 108/344 (31%), Gaps = 83/344 (24%) Query: 28 SWNINTLSEQEGVSLWK-NSVKRTTSDYTL----LRQYAK-NLDADIVFLQEMGSYNAVA 81 SWNI+ L + ++V T + Y L + + + D++ QE+ AV Sbjct: 80 SWNISVLPPCDVFKTPGFDTVPVTEAAYVKRSGQLTTFIENKIAPDVIAFQEVSGEQAVR 139 Query: 82 KVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRK--KNVRVLQQSYPLLGAKDSF 137 V P + + + + A A +K + L + Sbjct: 140 DVLPNDGADYLVCSFGSHKVQRL----------AFAWKKEFGPAVECEVEDALSLSSSLA 189 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL--DSLENT------YSPSCSLLSQQAQ 189 + R + L + I+GK LD+HLKS C D+ + C L QQ Sbjct: 190 EKDRVRPGLALALTIDGKLTRFLDVHLKSGCVSPFDNPPDALDGNAGDDDPCITLQQQVV 249 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR----- 244 L+ WI +K V+ GDFNR + + ++ D +D P R Sbjct: 250 PLEKWIERKSADTNRVVVLGDFNRNVWHET-HEPGKTRTDGSDPKSELPSTVKVRKLIDE 308 Query: 245 ---------------------------CNANKNL-----------------RNKIPIDYF 260 C K+ RN + +D+ Sbjct: 309 VNDGAPEGSKLTLLDEACPINTASDEACKRLKSAKMSDDEKLLKRSENLGCRNPVGLDHI 368 Query: 261 VMDQNAYKFLIQESF---SE--ILYNEDDIKSRGKRLSDHCPIS 299 ++ E + L + + LSDHCP++ Sbjct: 369 MIGAGFSSPHPAEKVALGRQGRTLSASAEHPNPLLSLSDHCPLT 412 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 6/30 (20%), Positives = 16/30 (53%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINT 33 + FL+ C + A+++++ +WN+ Sbjct: 3 RISTIFSIFLLLCPGAYARELKVATWNLGW 32 >gi|332530427|ref|ZP_08406371.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624] gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624] Length = 475 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 106/343 (30%), Gaps = 100/343 (29%) Query: 54 YTLLRQYAKNLDA---DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 LR+ A L +++ LQE+ +AV ++ P N W + ST+ L + Sbjct: 139 LQHLRKMAAELAKGKINVLVLQEVFDEDAVRQILPPN-WEV-SSTKGLTGSPE----IPQ 192 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFS--RAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 A+A K N ++ G S R R ++ ++ GK + L +HLK+ C Sbjct: 193 QLAVAYPKDNP-ARVRNVHAYGELSSVGPGRHPVRPGLDFTADVAGKPVRFLGVHLKAGC 251 Query: 169 FLDSLENTYSPS-------------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + N C+ + Q L+ W+ ++ + FV+ GDFNR + Sbjct: 252 RSADITNPLKRDYHSAEDFERQQAECNAMLAQVPVLERWVDERAAAKEEFVVLGDFNRNL 311 Query: 216 -------NYLGNNDD-----------------------FWKTIDPNDSL----------- 234 N D I D Sbjct: 312 QGEDSKTARSDNTDPKTPLKCSFNARDGKTECSSPVERLMPEISDGDPAGASFIRSIFTT 371 Query: 235 ----------IRFPKEKDSRCNANKNLRNKIP----------------IDYFVMDQNAYK 268 ++P+ C + R K ID+ ++ + Sbjct: 372 KQGTELKMVRGQYPENSRGACVLKSSGRYKREDGKKIVEAVASLAHDGIDHILVSAALAQ 431 Query: 269 FLIQESFSEILYNED--------DIKSRGKRLSDHCPISIDYD 303 L + SF YN + + SDHCP + D Sbjct: 432 RLKKTSFVMSRYNYRRIGENTPMVVTPQDAVPSDHCPHFVALD 474 >gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 431 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 106/321 (33%), Gaps = 81/321 (25%) Query: 55 TLLRQYAKN-LDADIVFLQEMGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDI 110 L Q + D++ QE+ A + + + + + Sbjct: 121 QQLSQVLARDVQPDVIAFQEVSGTKAAVEALGAAAGDYNVCSFDGKYKVQRL-------- 172 Query: 111 HTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 A A RKK ++ + ++ ++ R A + + +NGKK+ L +HLKS C Sbjct: 173 --AFAWRKKFGEAVEACRDIHEVSLPEAPAKDQVRPAYTVTLNLNGKKVRFLTVHLKSSC 230 Query: 169 F------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---- 218 L++ +C+LL QQ + L+ + + FV+ GDFNR + + Sbjct: 231 VSPLDRNPRRLDDASIEACALLQQQVRPLEAAFETLGQGVDHFVVLGDFNRNLAHELNQV 290 Query: 219 ---------------------GNNDDFWKTIDPNDS-----LIRFPK-----EKDSRCNA 247 + I+ + PK ++ C A Sbjct: 291 AGAEPTRSDGGTDLAKPLATGARTRNLLLEINDGQPASSKAALLLPKCPGSAALEAACEA 350 Query: 248 NKNL------------------RNKIPIDYFVMDQNAYKFLIQE-SFSEILYNEDDIKSR 288 +K RN + +D+ ++ Q+ + S + + S Sbjct: 351 SKTGVPTAEQQTLLGGKTGLGCRNPVGLDHILVSQSLAAAVSNTIKVSIGPFGGSLLPSV 410 Query: 289 GK-----RLSDHCPISIDYDF 304 + +SDHCP+ D F Sbjct: 411 NRPDPLLAVSDHCPLVADVQF 431 >gi|218670459|ref|ZP_03520130.1| hypothetical protein RetlG_01772 [Rhizobium etli GR56] Length = 230 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 78/232 (33%), Gaps = 61/232 (26%) Query: 129 PLLGAKDSFSRAG-----NRRAVELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSC 181 P L + A R V L ++ + + VL +HLK+ C + E + C Sbjct: 1 PQLAVMHTSECANETPRPVRGGVGLQIQRGNETVVVLSVHLKASCKRNDSEAERDQADDC 60 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + L +Q L +WI ++ + ++AGDFNR++ L D + D ++F Sbjct: 61 ATLMKQTDILSEWIRTERAAGKKVIVAGDFNRQL--LDTGDRVAAKLRAVDPGVQFYPTS 118 Query: 242 DSRCNAN-----------KNLRNK-----------------IPIDYFVMDQNAYKFLIQE 273 +C A+ N + IDYFV+ + I Sbjct: 119 R-QCWASFPNRGAVIIAAANQKFPEIGAAGGRPLPYSPKSNSKIDYFVVSGPVSQTPISS 177 Query: 274 S-------FSEILYNEDDIKSRGKRL----------------SDHCPISIDY 302 D +K+ + SDHCPIS+ Sbjct: 178 EQYAMGREAKTTELATDYLKTCEGKPNKFEDGSVLTFSEVEPSDHCPISMTL 229 >gi|319944723|ref|ZP_08018987.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] gi|319741972|gb|EFV94395.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC 51599] Length = 484 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 108/320 (33%), Gaps = 58/320 (18%) Query: 38 EGVSLWKNSVKRTTSD--YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST 95 +G ++ +R D L + + DIV +QE+ +AV +V K W I + Sbjct: 170 QGRLIFGPQHRRQDLDAKVRQLAELVRTARPDIVLMQEITDADAVRQVLGKG-WTIHTTA 228 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-- 153 ER + ++ A + + L R R + + + + Sbjct: 229 ERWNGGP---ISQNLAVAWPTHRFLQEPRVEVVESLARSSPEGR-RTRPGLAVYLPLPVP 284 Query: 154 -------------GKKIWVLDIHLKSFCFLDSLENTYSP----------SCSLLSQQAQW 190 + +L++HLK+ C L+ + S SC L Q Sbjct: 285 EKPSGTPPKAARPAPTLAILNVHLKAGCRQGRLDRSLSRQPTRQWRRLSSCQTLQSQVPA 344 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY--------LGNNDDFWKTIDPNDSLIRF----- 237 L+ W+ ++ + +I+GDFNR + G+ I +D + R Sbjct: 345 LEGWLDRQMAAGHAVLISGDFNRDLRQELRQGLPARGDGSPAAAPIRTSDEMRRVASVLP 404 Query: 238 ------PKEKD----SRCNANKNLRNKIPIDYFVMDQNAYKFLI--QESFS-EILYNEDD 284 P+ + K R ID F++ N +L E +++ E Sbjct: 405 ELDDDQPRGTRLTLVASGPYRKLARCHHHIDVFLLSHNLDAWLRTPPEDLRVQVVPFEAP 464 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + R SDHCP + Sbjct: 465 LSLERPRPSDHCPHVLQLPL 484 >gi|149923487|ref|ZP_01911890.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] gi|149815678|gb|EDM75207.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] Length = 343 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 102/329 (31%), Gaps = 68/329 (20%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 YVL + L A+ +R+VSWN+ D LRQ + + Sbjct: 42 YVLDPIGSLDSPPPRDAEHLRVVSWNLENFRGDP-----------EDHDLERLRQTIEAV 90 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D DI+ +QE+ A+A + P W I S H K +A R+ V ++ Sbjct: 91 DPDILAVQEIKDPEALAALLPG--WGIALSKGGGRGHQKL--------GVAWRRDRVELV 140 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEIN----------GKKIWVLDIHLKSFCFLDSLE 174 Q ++ R A +WV +HLK+ E Sbjct: 141 GQPV---EHRELTLSGRVRPAFSAYFRDAARSSASEASPPLDLWVTVVHLKA--MPTGHE 195 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----YLGNNDDFWKTIDP 230 + + Q L + + + V+ GDFN + + + P Sbjct: 196 DRTT--------QWPALVEAVRGLSKRDPDHVVLGDFNSTGAPGEGTATEHAELDAALRP 247 Query: 231 NDSLIRFPKEKDSRCNA------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---- 280 D L R P + C+A + ID + + + Sbjct: 248 AD-LRRLPNSE--GCSAYYDGARRDAWKEASEIDLVWVRGLEGALGADPAVHSGTHCAAH 304 Query: 281 ------NEDDIKSRGKR-LSDHCPISIDY 302 + + LSDHCP+ +D Sbjct: 305 HCRDFRSTEAYPEPDYSFLSDHCPVILDL 333 >gi|254780996|ref|YP_003065409.1| hypothetical protein CLIBASIA_04485 [Candidatus Liberibacter asiaticus str. psy62] gi|254040673|gb|ACT57469.1| hypothetical protein CLIBASIA_04485 [Candidatus Liberibacter asiaticus str. psy62] Length = 109 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 18/109 (16%) Query: 84 FPKNTWCIFYST----------ERLINHSKRDSNN--------DIHTAIAVRKKNVRVLQ 125 P++ W IFYS + +N S D N+ DI+TAIA+RK RVLQ Sbjct: 1 MPEDKWYIFYSGCGKNPVWDSMKGCLNFSSYDDNSGNIDTDESDINTAIAIRKDVARVLQ 60 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 SYPL ++ R GNR+ VELL+EI+ +K+W+L++HLKS C + ++ Sbjct: 61 VSYPLPAPQEITPRMGNRKTVELLIEIDDQKVWLLNVHLKSSCVVKKIQ 109 >gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] Length = 320 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 99/312 (31%), Gaps = 55/312 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75 + + ++NI LS ++ Y + DIV LQE+ Sbjct: 14 DTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFGGARA 73 Query: 76 --------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 A V + F ++ + S + + VR+ Sbjct: 74 AHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVRRHVR 133 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 R L + P +D+F R A +V+++G+ + V+++HL++F Sbjct: 134 RTLPRP-PQPFFRDAFYLD--RLAQVGVVDVDGRPLAVINVHLEAF------------DV 178 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLI 235 QA+ + D + + +P ++ GDFN ++ G D + I L Sbjct: 179 GTRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDLR 238 Query: 236 RFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + A+ P ID+ F E + + R Sbjct: 239 SAVNTASAD-TASATYPADAPARTIDHIF---------YPPQFFEAV-DTQRWCGRPAPP 287 Query: 293 SDHCPISIDYDF 304 SDHC ++ Sbjct: 288 SDHCAVTAALRL 299 >gi|294508721|ref|YP_003572780.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] gi|294345050|emb|CBH25828.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] Length = 358 Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 55/312 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75 + + ++NI LS ++ Y + DIV LQE+ Sbjct: 52 DTLTVTTYNIGYLSGMRNNEPVVRPDSLFHANMDQAAGYLRAAAPDIVALQEIDFGGARA 111 Query: 76 --------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 A V + F ++ + S + + VR+ Sbjct: 112 AHVHQLDTLAARLGYPGAAQAVNWDERYLPFPYGRPAVHFGRTLSGQAVLSRFPVRRHVR 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 R L + + R A +V+++G+ + V+++HL++F Sbjct: 172 RTLPRPPQSFFRDAFYLD---RLAQVGVVDVDGRPLAVINVHLEAF------------DV 216 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN------YLGNNDDFWKTIDPNDSLI 235 QA+ + D + + +P ++ GDFN ++ G D + I L Sbjct: 217 GTRETQARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHILAGTDLR 276 Query: 236 RFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + A+ P ID+ + ++ + + R Sbjct: 277 SAVNTALAD-TASATYPADAPARTIDHILYSPQFFEAV----------DTKRWCGRPAPP 325 Query: 293 SDHCPISIDYDF 304 SDHC ++ Sbjct: 326 SDHCAVTAALRL 337 >gi|171910435|ref|ZP_02925905.1| hypothetical protein VspiD_04665 [Verrucomicrobium spinosum DSM 4136] Length = 280 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 54/307 (17%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--YTLLRQYAKNLDA 66 ++ P ++ VRLV+WN+ K + + D + + A Sbjct: 1 MILISAPLNGHASEVVRLVTWNLEW------FPGRKPTATQGKKDRHFLEVAAVIPQFRA 54 Query: 67 DIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D++ LQE+ S +AK+ P + + + AV + + + Sbjct: 55 DVMVLQEVRDQDSAEKLAKLMPG--FQVHVVSR-----------FKDEVGGAVGLQQIAI 101 Query: 124 LQQSYPLLGAKDSFSRA---GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + +S+ R R V + + G+ + V +HLKS D ++NT Sbjct: 102 MSRFPADGAWAESWKRGWANAPRGYVYAKLIVEGRPLHVYGLHLKSN-LGDPIKNTSKR- 159 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + L I + ++ P V+ GDFN + + + + +L++ ++ Sbjct: 160 ----EDAVEQLLGHIKDQCKAGEPVVVTGDFN------TSKEQL--NLAGDRTLLKLEEQ 207 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-----SDH 295 A + + K I + Y ++ + +Y D + L SDH Sbjct: 208 --GFFWAFEGVPLKDRIT--IPGGGRY----PDACFDHVYTRDLGRPVAAVLKDTPGSDH 259 Query: 296 CPISIDY 302 P+++D Sbjct: 260 FPVAVDL 266 >gi|223040783|ref|ZP_03611050.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] gi|222877973|gb|EEF13087.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] Length = 445 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 111/311 (35%), Gaps = 58/311 (18%) Query: 6 VLALVFFLVPCTASVAQ-KVRLVSWNINTL--SEQEGVSLWKNSVKRTT-------SDYT 55 + AL+F + A ++++ ++N L ++ +G V ++ + + Sbjct: 8 LFALIFAALFFVVFAAGAELKIATFNAQNLFDAKNDGSEYKDFVVGKSEWSEKKASAKFK 67 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAI 114 + K L+ADI+ LQE+ + + ++ + ++ F +S + + Sbjct: 68 TVSAKIKELNADIIALQEIENEQILKELMREASYKYFAFSNSKNGP-----------VGL 116 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV L + P S R + L E+NG+K +L++H + + Sbjct: 117 AV-------LSRVKPEKTRIFSVPNVKTRDILRLDFEVNGQKFSLLNLHFPAR---KNPL 166 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L L D V+ GDFN + + + + +L Sbjct: 167 KQRKTAFITLK---SALTD--------TEKVVVLGDFN----APYGDKELLGDLAASKNL 211 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRLS 293 + + + +D+ ++ ++A + SF ++ G ++S Sbjct: 212 ANLWVFL--PKHERYSHTSNNALDHVLLSKDALSQNYVLNSFK--------VELDGAQIS 261 Query: 294 DHCPISIDYDF 304 DH + +F Sbjct: 262 DHFALVFRLNF 272 >gi|108756804|ref|YP_634791.1| putative lipoprotein [Myxococcus xanthus DK 1622] gi|108460684|gb|ABF85869.1| putative lipoprotein [Myxococcus xanthus DK 1622] Length = 686 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 104/300 (34%), Gaps = 42/300 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNA- 79 + + +WNI G L L A DA D L E+ S Sbjct: 226 PLSVGNWNIEWF----GDPLNGP----NDELLQLTNAQAVIADAGVDFWGLAEIVSTAQF 277 Query: 80 --VAKVFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK- 134 + P + F + + R+ + + S N+ + + V+VL+ L + Sbjct: 278 NELKARLPG--YDGFLADDSSRVSSGTSDYSANEQKVGVLFKSDVVQVLRADVVLGNHEY 335 Query: 135 DSFSRAGNRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D R R V+L ++ G + V L IH+K+F D S S W+K Sbjct: 336 DFGGRPPLR--VDLRIQRGGASVDVTALVIHMKAFAGPDEYARRLSAS--------GWIK 385 Query: 193 DWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 D++ + + ++ GD+N + D ++ + + RF + S Sbjct: 386 DYVDLRLPTQRA-MVVGDWNDDVDVSIATNPSTGVKYDTPYRNFVSDSANYRFTTQALSE 444 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ ++ + + S I + I SDH PI ++F Sbjct: 445 AGIGSTVSRSTFIDHQLVTNELWASYVPNSTQVIRPS---ITGYRDNTSDHYPIISRFNF 501 >gi|323455247|gb|EGB11116.1| hypothetical protein AURANDRAFT_62056 [Aureococcus anophagefferens] Length = 446 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 102/329 (31%), Gaps = 66/329 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDY--TLLRQYAKNLDADI 68 T ++ +++V WNI + + S R ++ + L D+ Sbjct: 54 APTYDASKPLKVVVWNIQYGAGIRQHFFYDGGDAVSTPRHEVEFHTEAIGDALAALAPDV 113 Query: 69 VFLQEMGSYNAVA------KVFPK-------------NTWCIFYSTERLINHSKRDSNND 109 V LQE+ +A V + W + Y +H R Sbjct: 114 VLLQEVDRRSARTHRIDELAVVGEKLAAVGLVNRASAAYWRVPYVPHPKHDHVGR---IG 170 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +H A R + PLL RRAV + +L+ HL +F F Sbjct: 171 MHLATFSRYALGGATRYQLPLLKESRLRRLFNLRRAVLATPLAGDSAVTLLNTHLSAFSF 230 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------KIN----- 216 D + +Q L++ I ++ +++AGDFN ++ Sbjct: 231 GDG----------TVERQVAALRETILPRQTRN--WLLAGDFNSLTPYEAAATLSKDEAA 278 Query: 217 -YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 Y + L P+++ + ID+ A Sbjct: 279 LYPEDETPVAPLYASTVPLWASPEDRIDTYKPWTSPAPDRTIDHAFASPGAA-------- 330 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +++ ++ LSDH P+S+ + Sbjct: 331 ----FSDAKVERTDGYLSDHQPVSLTVTW 355 >gi|268315822|ref|YP_003289541.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262333356|gb|ACY47153.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 338 Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 112/325 (34%), Gaps = 57/325 (17%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-----QYAKNL 64 +F P A+ +R+ + N L + G + + + Q + + Sbjct: 36 LFVPEPPPEYRAEGIRIATLNTFFLFDGYGDEGQTDFPHKGNPEAARRHRARIAQVLRMI 95 Query: 65 DADIVFLQEMGSYNAVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +AD+V LQE+ + + ++ ++ + + + D+ A+ R Sbjct: 96 NADLVVLQEVENEEVLRRMVTEDLPDLNYEVHFV-------QGHDTFTGQDVAVLSRLPV 148 Query: 121 VRV--LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ ++ P+ G D++ + N + + + + ++ +H FL +++ Sbjct: 149 EKIGRTEERVPVEGTDDTYGVSKN---IWVRLYLGDLPATIIGVH-----FLAQPDDSRR 200 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------------RKINY----- 217 QA+ ++ + ++ + + GDFN R + Sbjct: 201 K--PRREAQAEVIRRLVERELAAGRAVAVLGDFNDYDESVLDLNGHRPITRTLALVKAAG 258 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 G +DD + + RF D+ + ID+ ++ L + + + Sbjct: 259 PGPDDDLYNVMAEVPQHDRFTVFYDADEDWQVEWPELAAIDHVLLSPRLRARLREVHYVQ 318 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y+ + +DH PI + Sbjct: 319 A-YDPRTV-------TDHFPIVVTL 335 >gi|171913163|ref|ZP_02928633.1| hypothetical protein VspiD_18325 [Verrucomicrobium spinosum DSM 4136] Length = 261 Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 33/217 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--YTLLRQYA 61 + + + + ++ VRLV+WN+ + + + D + + Sbjct: 3 RLIFLGLLVAISTPGYASEVVRLVTWNLKW------FPGERPNATQDEKDRHFLEVAAVM 56 Query: 62 KNLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 AD++ LQE+ S +AK+ P + + + AV Sbjct: 57 PQFRADVLVLQEVRDQDSAEKLAKLMPG--FQVHVVSR-----------FKDEVGGAVGL 103 Query: 119 KNVRVLQQSYPLLGAKDSFSRA---GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + ++ + +S+ R R + + G+ + V +HLKS D ++N Sbjct: 104 QQIAIMSRFAADGAWAESWKRGWANAPRGYAYAKLIVEGRPLHVYGLHLKSN-LGDPIKN 162 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 T + L I + ++ P V+ GDFN Sbjct: 163 TSKR-----EDAVEQLLGHIKDQCKAGEPIVVVGDFN 194 >gi|257458794|ref|ZP_05623917.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] gi|257443782|gb|EEV18902.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] Length = 453 Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 107/307 (34%), Gaps = 47/307 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKR---TTSDYTL---- 56 VLAL+F + C AS A+ +++ S+N+ L +G + R + Y Sbjct: 3 VLALLFAMFFCGASAAE-LKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQE 61 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + L+ADI+ LQE+ + + + K + + + + +AV Sbjct: 62 IADEISALNADILGLQEIENEAVLKALAQKAGYKFYAFSRAQTAPA----------GVAV 111 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + Q++Y + +R R L G +H+ S + L Sbjct: 112 MSRIPIKFQKTY---RPTELKTRDILRADFAL----GGTDFSFYVVHMLS--ARNPLSER 162 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++ + + ++AGDFN ++ + +D Sbjct: 163 KRN------------FAFLREVLQGHQRAIVAGDFNTNFGRNSLLNELIERDGFSDLWAL 210 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 P + + ++ + +D+ ++ + + + + + + + ++ SDH Sbjct: 211 HPCSQLKHFGSCESHESGAVLDHILLSDDFFS--NEPGYKKDSF----VVAKSSTASDHF 264 Query: 297 PISIDYD 303 PIS Sbjct: 265 PISFILT 271 >gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 361 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 45/308 (14%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++R+ A++ ++ +A++A +RL SWNI L G DY + + Sbjct: 4 LLRRGAFAILLIVLLPSAALAD-LRLASWNIQHLGWNVG------------KDYPAVARI 50 Query: 61 AKNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 A D + +QE+ + + ++ W + YS N + A Sbjct: 51 AAQF--DFLAIQEVMNAEGIYRLRDTLEDATGAEWSVLYSDALGRNTYREK------YAF 102 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDS 172 R+ V + + + D F+ R + G L +H+ Sbjct: 103 LWREAAVEYVGGALTYIDEADRFA----REPFSAVFRSRGTDQHFLAATVHITYG----D 154 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG--NNDDFWKTIDP 230 L + WL D + + + F GDFN ++ G + + + Sbjct: 155 RVADRVEEIEALRRYWDWLADVMPEYAGERILF---GDFNLPPHHDGWASMRAVAEPLVT 211 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ++ AN +P D+ + +A SE+ D + Sbjct: 212 EGATTLSTHDRR---YANLYDNLWVPKDHTLPLGDAGILPFPVVLSEVTGVYWDHEKARD 268 Query: 291 RLSDHCPI 298 R+SDH P+ Sbjct: 269 RVSDHAPV 276 >gi|291615489|ref|YP_003522597.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291582551|gb|ADE17007.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 396 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 88/291 (30%), Gaps = 46/291 (15%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + + SWN L T D++ D V LQE+ S A Sbjct: 17 SAQALTIASWNTKHLG------------WGTKRDWSATAAVVAPY--DFVALQEVMSGAA 62 Query: 80 VAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 V ++ W S + + A R++ V + + L Sbjct: 63 VKRLVQALEQQTGADWSSLVSETSVGRSKRYQE----FYAFIWREEVVDYVGGAVVYLDP 118 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D F+R A + + +H+ + DS + + +Q + Sbjct: 119 GDLFAREP--FAARFQTDNGQYRWTAATVHV---IYGDSRDERRREA-----RQLDDYVN 168 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ ++ P ++ GDFN G D + + P R Sbjct: 169 WLEEEVAEGDPVILTGDFNLPPESAGFRD-LARVLKPAIREGASTLSAKEG-------RY 220 Query: 254 KIPIDYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +A K + F + L ++ + +SDH P+ I Sbjct: 221 ANLYDNIWYRPDALKIQETRIDRFPQRLGISHNLARKT--VSDHAPVVIAL 269 >gi|319954984|ref|YP_004166251.1| endonuclease i [Cellulophaga algicola DSM 14237] gi|319423644|gb|ADV50753.1| Endonuclease I [Cellulophaga algicola DSM 14237] Length = 1976 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 47/306 (15%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKVF 84 +V+WNI ++ N + ++L K +DAD+ ++E+ V Sbjct: 1390 VVAWNIEWFGDETNSPTVGNPLSDAIQKDSVL-TILKKMDADVYAVEEISDDVLFGQMVS 1448 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--- 141 N + S +++ + + + + PLL + + G Sbjct: 1449 EMNGYDYVLSE--AVSYPNDATGTQQKVGF-IYNTATVSVVATKPLLASIHPYYNGGDAT 1505 Query: 142 ----------NRR----------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 R ++ + K+ ++ +H ++ Sbjct: 1506 ALSDYPDADKTRFYASGRLPFLMTADVTLGGVTKQFDIVALHARANSSSGPQSRYDMR-- 1563 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + LKD + + + ++ GD+N + + D+ T+ D+ ++ Sbjct: 1564 ---KYDVEVLKDTLDA-QFADSNLIVLGDYNDDVAF-TVADEVSSTVSTFDAYVQDTVNY 1618 Query: 242 DSRCNANKNLRNKIP------IDYFVMDQNAYKFLIQESFSEIL--YNEDDIKSRGKRLS 293 + ID+ + I S S Y+ D +S Sbjct: 1619 TILTKVLSEGDYRSYVFRENMIDHITVSNELSASYIDGSVSVGYEFYDTD----YTTTVS 1674 Query: 294 DHCPIS 299 DH P+S Sbjct: 1675 DHFPVS 1680 >gi|91217808|ref|ZP_01254763.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC 700755] gi|91184009|gb|EAS70397.1| hypothetical protein P700755_06530 [Psychroflexus torquis ATCC 700755] Length = 271 Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 113/311 (36%), Gaps = 58/311 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + L+ + +V++ SWNI L + + T D+ Sbjct: 6 SLVVFLSLLFVSTISLAQVKISSWNIRHLG-NSKSKIEIEFMAETLRDF----------- 53 Query: 66 ADIVFLQEM----GSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D V +QE+ G AVAK+ + W S ++ + + A Sbjct: 54 -DAVAIQEVVAGNGGAQAVAKLADELNRKGSRWDYVVSK-----PTQGGTYSSERYAFLW 107 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + ++V ++++ L + F R + + + +++IH ++ + Sbjct: 108 KTSRLKVDRKAWLDLDCIEEFE----REPYFIRFKFENQDFTLVNIH--------AVPKS 155 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 P Q+ ++LK + + F+ GDFN ++ + + + Sbjct: 156 KQP-----EQELKYLKLYPELYPDEN--FIFLGDFNLPESHS-----VFNPLKSKGFISA 203 Query: 237 FPKEKDS---RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +K S +C A L D +D A+K L ++ ++ Y + +S Sbjct: 204 LVNQKTSLKMKCKAGICL--ASEYDNIFIDSKAFKIL--KTGVDLFYETFTDLKSARMIS 259 Query: 294 DHCPISIDYDF 304 DH PI +++DF Sbjct: 260 DHIPIWVEFDF 270 >gi|332293386|ref|YP_004431995.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332171472|gb|AEE20727.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 1548 Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 100/312 (32%), Gaps = 51/312 (16%) Query: 26 LVSWNINTL----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +V+WNI + + ++R + +R + LDAD++ ++E+ A Sbjct: 964 VVAWNIEWFGDENNAPPAGRPMSDEIQRDS-----VRTVLRRLDADVIAVEEIADDILFA 1018 Query: 82 KVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + S + + N + + + K L ++ LL Sbjct: 1019 ELVDGLEGYDYILS-DAVSNPTGTPPFQKL--GF-IYKTATVNLVKTQALLATIHPLYNG 1074 Query: 141 GNRRAV----------------------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 G+ A+ ++ + ++I ++ +H ++ S Sbjct: 1075 GDDSALVDYPSTTDRFYASGRLPFLMTADVTINGTTEQIDLIALHARANGSTQSQNRYDM 1134 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------WKTIDPND 232 + LKD + + S ++ GD+N ++ D+ + + Sbjct: 1135 R-----RYDVEVLKDSLDV-QFSDRKIILLGDYNDDVD-ETVADEVPTTESSFIAYVQDS 1187 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 S + + ID+ + + I+ S S D+ Sbjct: 1188 ENYNVVTSVLSDAGFRSFVSRENMIDHIAITDELFDNYIESSASVGYQFYDE--DYAFTA 1245 Query: 293 SDHCPISIDYDF 304 SDH P+S + F Sbjct: 1246 SDHFPVSARFIF 1257 >gi|88813281|ref|ZP_01128520.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231] gi|88789453|gb|EAR20581.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231] Length = 556 Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 100/302 (33%), Gaps = 36/302 (11%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76 +RL S+N+ G +++ R L + LDAD++ L E+ + Sbjct: 269 GALRLASFNMENYFINRGGRGAESAAAFRRQQ--RKLVEAIVALDADVLALHEVENRHRA 326 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP--LLGAK 134 A+ + + + + + A+R + Q+ P + + Sbjct: 327 VAALVRAIN--------TASPSEARYLAAAAGADYGSGAIRTVLLYREQRLVPRSVWINE 378 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSC--SLLSQQAQW 190 DS A ++ + V+ HLKS C ++ C L +QA Sbjct: 379 DSVFTRPPIAADFRRLDGEPATVGVVAAHLKSKGGCR-ARGDSDQGRGCWGRLRRRQAAA 437 Query: 191 LKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L W+ + + ++ F++ GD N +Y G + + + + Sbjct: 438 LSQWLKRLQAAVDQPRFLLMGDLN---SYPGEA-AVQTLLSAGLRDLIAERVAPADRYTY 493 Query: 249 KNLRNKIPIDYFV--------MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +D+ + + Q A + + + Y K R SDH P+ + Sbjct: 494 VYHGYAGYLDHALATVALADAVGQVAIWHINADEPRYLGYTNPRAKPTFYRSSDHDPVVV 553 Query: 301 DY 302 D Sbjct: 554 DL 555 >gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] Length = 269 Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 107/320 (33%), Gaps = 74/320 (23%) Query: 7 LALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L+ L+ T ++AQ ++ ++SWNI + + + + K+ Sbjct: 2 RYLIILLLFATTTIAQNKEITIISWNIQH-----------FGKTKNAEEIEKIAEIVKH- 49 Query: 65 DADIVFLQEM----GSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 ADI+ +QE+ AV ++ +W S + + A Sbjct: 50 -ADIIAIQEVVTTFQGVQAVNRLTEALEKKGESWDYLISEKTNSPSRMTEC-------YA 101 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + KN + + + +R + + +V++ H K + Sbjct: 102 IVWKNKHIKIKKGHEGSLVKELDKMVDREPFLVQFYVADTSFFVMNYHAK--------PH 153 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--------- 226 +P + + L ++ QK F++AGDFN L +++ +K Sbjct: 154 KRNP-----RPEVKELLAYV-QKNYKNKKFILAGDFN-----LSQSEEVFKNFKLAGFKP 202 Query: 227 -TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-D 284 ID +L C L PID + S I + + D Sbjct: 203 VNIDQKTTLKLI-------CKNASYLNY--PIDNIFYTP----KINATSTKIIDFVKHCD 249 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + +RLSDH P+ + + Sbjct: 250 NLTASRRLSDHLPVELKFRL 269 >gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 313 Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 120/326 (36%), Gaps = 45/326 (13%) Query: 3 RKYVLALVFFLVPCTASVA--QKVRLVSWNI-NTLSEQEGV-SLWKNSVKRTTSDYTLLR 58 RK +LA +F V C + + +WNI N L + ++ + ++ LR Sbjct: 4 RKSILAAIFVFVACVVFADTKDTLTVATWNIRNYLPVNRRIDGKFRPDYPKPEAEKIALR 63 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + +DAD++ LQEMGS +A++ S + H+ + D +AV Sbjct: 64 AVIRQIDADVIALQEMGSGGHLAEL-----QRDLESEGCVYPHAHVLAGADPVRQLAVLS 118 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVE----------INGKKIWVLDIHLKSF 167 + + + + R +R +E+ VE +++ + +HLKS Sbjct: 119 RLPLREVREHSDMDFAYRDGRTPVSRGLLEVSVEAPGAESGEGLSTNRRVTLFVLHLKSR 178 Query: 168 --CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-------LVPFVIAGDFNRKINYL 218 F D E+ + ++A+ +++ + Q+ + F+IAGD N ++ Sbjct: 179 LTTFPDDPESATWRA-----KEAEAIRNRVLQRFPNPAATGGGGGRFLIAGDCNDVVSSR 233 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFS 276 + L+ + + R + +D ++ L Sbjct: 234 PIRALLKRGNTEIARLLPAT-DSRGETWTHYYAREETYSRVDNILVSPA----LAAAVVR 288 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + + + SDH P++++ Sbjct: 289 MWVVDSPGVLVA----SDHRPVAVEL 310 >gi|310824891|ref|YP_003957249.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] gi|309397963|gb|ADO75422.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] Length = 323 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 106/339 (31%), Gaps = 86/339 (25%) Query: 23 KVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75 +R+VS+N+ G++ + +R ++ L D+V LQE+ Sbjct: 5 PLRIVSYNVRYFGHALRGLASTQGPKRRVSAALAALDPL-----PDVVCLQEVETSSFRS 59 Query: 76 SYNAVAKVFPKNTWCIFY---------STERLI--------NHSKRDSNNDIHTAIA--V 116 S KV + F + +H K + T +A V Sbjct: 60 SVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAILV 119 Query: 117 RKKNVRVL--QQSYPLLGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHL---- 164 ++ +RV P R R+ + +G+ V + HL Sbjct: 120 NRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLPT 179 Query: 165 -----------KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 K C ++ L +A+ L +T+ PFV+ GDFN Sbjct: 180 PFAREFWATKDKMGCGVNQL------------HEARKLVALLTEH-AQGEPFVVTGDFN- 225 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQN 265 ++ + L + + N + ++ +D+ + + Sbjct: 226 ----SPPASPVFRYLCEEAQLTCA-QAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGS 279 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++L E + D+ SR LSDH P+ + Sbjct: 280 GVRWLDMEETR--PFG--DVGSRFHGLSDHMPLIARFTL 314 >gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 309 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 52/322 (16%) Query: 21 AQKVRLVSWNINTL---------------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 A VR+ S+N L S + + K + Sbjct: 2 ATTVRVASFNCENLFARFEFKPNVDLDRISTDGWEINETLFEPNKPEARKITARAIKEAN 61 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ADI+ QE+ + + + + +N + + + + + I A+ R+K V Sbjct: 62 ADIIAFQEVENLDVLKRF--RNQYLGGFKSYPHAVLIEGNDPRLIDVAVLSREKFPIVST 119 Query: 126 QSYPLLGAKDSFSRAGNRR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 +S+ + A +R +E+ +E+ + + + HLKS + Sbjct: 120 RSH-----HHVKANATSRGFVFSRDCLEVDIEVGSQTLTLFVNHLKSMMGGRDQTHERR- 173 Query: 180 SCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Q+ W+K + Q+ PF++ GD N ++ + D + + + + Sbjct: 174 -----KLQSTWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVEN 228 Query: 237 FPKEKDSRCNANKNLR----NKIPIDYFVMDQNAYKFLIQESF-------SEILYNEDD- 284 + + + DY ++ ++ + Y Sbjct: 229 VIERLPAAERWTHYWNGGNEYRQL-DYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPRF 287 Query: 285 --IKSRGKRLSDHCPISIDYDF 304 + + + SDHCPI ++ Sbjct: 288 PGVGTNDPKASDHCPIVVELKL 309 >gi|115374765|ref|ZP_01462041.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|115368242|gb|EAU67201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] Length = 327 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 106/339 (31%), Gaps = 86/339 (25%) Query: 23 KVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------ 75 +R+VS+N+ G++ + +R ++ L D+V LQE+ Sbjct: 9 PLRIVSYNVRYFGHALRGLASTQGPKRRVSAALAALDPL-----PDVVCLQEVETSSFRS 63 Query: 76 SYNAVAKVFPKNTWCIFY---------STERLI--------NHSKRDSNNDIHTAIA--V 116 S KV + F + +H K + T +A V Sbjct: 64 SVAERRKVPGETQLQAFMGRMEEIFAAQGREMPYDAFYFRAHHYKLGDFSLYTTGLAILV 123 Query: 117 RKKNVRVL--QQSYPLLGAKDSFSRAGNRRAVELLVE------INGKKIWVLDIHL---- 164 ++ +RV P R R+ + +G+ V + HL Sbjct: 124 NRRTLRVDRHNVDEPSQITHHHVQRLKERKQSRICAHMRLLRTSDGRPFHVFNTHLSLPT 183 Query: 165 -----------KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 K C ++ L +A+ L +T+ PFV+ GDFN Sbjct: 184 PFAREFWATKDKMGCGVNQL------------HEARKLVALLTEH-AQGEPFVVTGDFN- 229 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--------KIPIDYFVMDQN 265 ++ + L + + N + ++ +D+ + + Sbjct: 230 ----SPPASPVFRYLCEEAQLTCA-QAIVGQINPSAIRGFPTAGFMHLRMHLDH-LFSGS 283 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++L E + D+ SR LSDH P+ + Sbjct: 284 GVRWLDMEETR--PFG--DVGSRFHGLSDHMPLIARFTL 318 >gi|115378940|ref|ZP_01466074.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|310821513|ref|YP_003953871.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364057|gb|EAU63158.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|309394585|gb|ADO72044.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 319 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 88/292 (30%), Gaps = 21/292 (7%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + A V + WN+ ++ D + DI L+E+ Sbjct: 42 PSQGSATTVDIGCWNVEWFGSSSNGPTNDTLQQQNVRD------VLLGSNLDIWGLEEVV 95 Query: 76 SYNAVA--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132 S A + K + S + + S S+++ I + V L Sbjct: 96 STTAFSNLKAQLSGYAGLLASDASVTSGSSFYSSSEQKVGILYKTSVASVQSARIILTAN 155 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D R + + + + I V+ H K+F S + + S LK Sbjct: 156 DSDFAGRPPLEVKMRVTLNGTARDIVVIVFHAKAFDDATSWQRRLNAS--------NALK 207 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ P V+ GD+N ++ + ++ + FP + S Sbjct: 208 AYLDS-TYPSTPVVVLGDWNDDVDTSITSGKASPYQNFVSDAQDYFFPTKALSDAKVAST 266 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + S + I S +DH P+ Y Sbjct: 267 ASYPDMIDHQLVTNELKSLYVAGSAKVYRVDT-YISSYATTTTDHFPVLTRY 317 >gi|284992104|ref|YP_003410658.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065349|gb|ADB76287.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 322 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 88/334 (26%), Gaps = 68/334 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYNA 79 VR+ +WN+ L R + Y L + D++ +QE+G+ A Sbjct: 2 VRIGTWNLENL-----FRPEDEDGPRDPAAYEAKLAALAGVIARIQPDVLAVQEVGNPAA 56 Query: 80 VAKVF--PKNTWCIFYSTERLINHSKR--------DSNNDIHTAIAVRKKNVRVLQQSYP 129 +A + W + R ++ TA + ++V Sbjct: 57 LADLAERAGGEWHCTTAGVEPGQRPIRVGYLSRLPLTDVAEITAFPEKLDPIQVDDAG-- 114 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 RA R V + G I ++ HLKS P + + Sbjct: 115 --TRLAVMGRAALRARVAV----GGTPIDLITCHLKSKLLTFPPGPDGRPRFDT-RDEGE 167 Query: 190 WLKDWITQK--------------------KESLVPFVIAGDFN-------RKINYLGNND 222 + + + ++ GD N +I Sbjct: 168 RARAAVYALSRRAAEAATVRAAATDLLDGQGQDRRLLVLGDLNDVPEAATTQILQGPPGS 227 Query: 223 DF----WKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESF 275 + + D D + + + R + ID+ ++ + Sbjct: 228 EIGTGGFAQPDRGDGQRLWNLAARIPADQRFSRRYRGRGELIDHILVSHALVHSVADGDV 287 Query: 276 SE-----ILYNEDDIKSRGKRL-SDHCPISIDYD 303 EDD R SDH P+ D Sbjct: 288 RTDGAGPTPSIEDDPSRREDAPGSDHRPVVAQID 321 >gi|182414598|ref|YP_001819664.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841812|gb|ACB76064.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 313 Score = 71.3 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 111/311 (35%), Gaps = 32/311 (10%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSL--WKNSVKRTTSDYTLLRQYAKN 63 L + + A + L ++N+ ++ ++ + + LR+ Sbjct: 18 AFWLACVVGVASVLRADSLTLATYNVENYVATNRMTEDGFRRDYPKPEAQKRALRRVLLA 77 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS-KRDSNNDIHTAIAVRKKNVR 122 +DADIV LQE+G + ++ + S + + ++ D H A+ ++ + Sbjct: 78 IDADIVVLQEIGDEPYLHEL----RRDLAKSGLDYPHATLLAAADPDRHQALLSKRPLLA 133 Query: 123 VLQQ---SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V +P LGA + A R +E+ V + ++ + +HLKS F + +++ S Sbjct: 134 VTPHARLEFPYLGATE----AVKRGLLEVRVATSAGELTIFAVHLKSR-FTERADDSQSE 188 Query: 180 SCSLLSQ--QAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + +A ++D + + FVI GDFN + SL Sbjct: 189 ----LRRVGEATAIRDVVLARMGDPGNARFVILGDFNDDKASKPVQRLLQRGSVRIASL- 243 Query: 236 RFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + R +D+ ++ L + D S Sbjct: 244 LPVSDSRGDTWTYHYRRRDSYTRVDHILVSPA----LAPAVAQHRAWIAD--LDGVNEAS 297 Query: 294 DHCPISIDYDF 304 DH P+ + DF Sbjct: 298 DHRPVVVKLDF 308 >gi|157164312|ref|YP_001467079.1| putative endonuclease/exonuclease/phosphatase [Campylobacter concisus 13826] gi|112800432|gb|EAT97776.1| putative endonuclease/exonuclease/phosphatase [Campylobacter concisus 13826] Length = 460 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 92/306 (30%), Gaps = 52/306 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSD-------YTLL 57 AL + + A ++ + ++N+ L + +G + D Sbjct: 2 RALFVLVFAVLVAFASEISIATYNVQNLFDCKDDGSEYPDFKSSTSKWDCEAASSKLKRT 61 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 RQ LD DI+ L+E+ + + + + + T+ + + + Sbjct: 62 RQVIDALDTDIIALEEVENEQVLKSLVEGSDYKFIIFTKE----------KNSPVGLGIV 111 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K P R ++++ E+ GKK V H + + N Sbjct: 112 SKIQ-------PSSSEIFEVPNVKTRNILKVVFEVEGKKFSVFVNHFPA---YKNGINMQ 161 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN-NDDFWKTIDPNDSLIR 236 + L L + ++ GDFN ND + Sbjct: 162 KKAERTLR---AALG--------NEQNVIVLGDFNSPYGQKSILNDIIVTRGFYDLYSFL 210 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSEI--LYNEDDIKSRGK 290 PK++ S K K ID+ ++ N I SF + D+ Sbjct: 211 APKDRYSHAVHGK----KRAIDHVLLSPSFMANGDLSYIDGSFEVFKPSFVVDEHGFAKS 266 Query: 291 RL-SDH 295 L SDH Sbjct: 267 DLYSDH 272 >gi|284040838|ref|YP_003390768.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283820131|gb|ADB41969.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 1015 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 91/309 (29%), Gaps = 46/309 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD---------YTLLRQYAKNLDADIVFLQ 72 Q + +VSWN+ G N RT +D +R +ADI LQ Sbjct: 530 QTLSVVSWNLEWYGFDGGSYTCTN-GSRTYADNGPTNETLQAQNVRSVMDAFNADIYILQ 588 Query: 73 EMGSYNAVAKVFP-------KNTWCIFYSTERLINHSKRDSNN----DIHTAIAVRKKNV 121 E+ N + P + + ++ + + N + + + V Sbjct: 589 EVSDKNLLVTNTPAGYALSCSDQYTSYFFQDLCDANGNPQGFNPTSLNQKVCVMYKTSVV 648 Query: 122 RVLQQSYPLLGAKDSFSRAGNR------------RAVELLVEINGKKIWVLDIHLKSFCF 169 ++ L R + V+ +K++++DIH KS Sbjct: 649 SMIPAESKPLLTDKYSYTTTPRSDAWASGRLPYLFVANVTVDGQTRKLYIVDIHAKSGSA 708 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL-GNNDDFWKTI 228 N L + V ++AGD+N ++ + Sbjct: 709 QADY-NRRKQDIIDLKAELDA--------NYGNVNLIMAGDYNDDVDQSIAAGNPSSYAN 759 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +D + S N N + ID+ + + S + + + + Sbjct: 760 FVSDPNYTVISSELSSSNCNTDANFTDAIDHITVSNELASSYVAGSVASVRPA---VVNY 816 Query: 289 GKRLSDHCP 297 SDH P Sbjct: 817 ALTTSDHYP 825 >gi|325285062|ref|YP_004260852.1| Endonuclease I [Cellulophaga lytica DSM 7489] gi|324320516|gb|ADY27981.1| Endonuclease I [Cellulophaga lytica DSM 7489] Length = 1889 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 33/311 (10%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +P + + +V+WNI ++ + + + LDADI ++ Sbjct: 1295 TIPVEIGKDKTLDVVAWNIEWFGDEANSPAAGSPMS-DAIQKDSTKAIIAKLDADIYAVE 1353 Query: 73 EMGSYNAVAKVFPK-NTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E+ A++ + + S + + +TA +LQ + Sbjct: 1354 EIADETLFAQMVSELPGYDYVLSPAVSYPNDPGVSQKLGFIYNTATVNVVNTKVLLQTIH 1413 Query: 129 PLLGAKD-----SFSRAGNRR----------AVELLVEINGKKIWVLDIHLKSFCFLDSL 173 P+ D ++ A +R ++ + ++I V+ +H ++ D+ Sbjct: 1414 PMYNGGDDSALINYPSATDRFYASGRLPFLMTADVTINGATEQINVVALHARANSGTDAQ 1473 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + LKD + + ++ GD+N ++ + T N Sbjct: 1474 GRYDMR-----KYDVEVLKDTLDVQYADKK-LILLGDYNDDVDTTVADITTTTTSSFNAY 1527 Query: 234 LI-----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + S + + + ID+ + I ES D Sbjct: 1528 ATDEVNYNIVSKTLSDQDFRSYVFRENMIDHITITNELNDNYIAESARVHYEFYD--SDY 1585 Query: 289 GKRLSDHCPIS 299 +SDH P+S Sbjct: 1586 PNTVSDHFPVS 1596 >gi|315506688|ref|YP_004085575.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315413307|gb|ADU11424.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 320 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 106/322 (32%), Gaps = 49/322 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A + +++WN+ L E T+ T L AD+V LQE+GS A Sbjct: 2 ANNLIVMTWNVENLFPPEDTDTSAADT--YTAKLTYLAGLIVGTGADVVALQEIGSLRAA 59 Query: 81 A--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK------NVRVLQQSYPLLG 132 + W S+ + I A+ R + + P + Sbjct: 60 QDLQAALGEPWQAVVSS--------HPDSRGIRVAVLARHPLTEEAQILALPPSGLPAVP 111 Query: 133 AKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCS------- 182 D + R A+++ V+ G + +L HLKS + D + Sbjct: 112 DVDGDTLTHMGRGALQVHVDCGGVGLRLLTAHLKSKLLTYPDGRRYPLNEDERARGAGYA 171 Query: 183 LLSQQAQW------LKDWITQKKESLV---PFVIAGDFN------RKINYLGNNDDFWKT 227 LL + A+ L + + P ++ GD N + G D Sbjct: 172 LLRRTAEAVALRVHLNKALAAAAVNGQPGMPTILCGDLNDGPDAITTVLLEGPADGDVNR 231 Query: 228 IDPNDSLIRFPKEKD---SRCNANKNLRNKIPIDYFVMDQNAYKFLIQ-ESFSEILYN-- 281 D D++ + + +R + N ID+ + ++ LI +S + + + Sbjct: 232 PDKGDAVRLYNLGRRLPPARAYSRIYQGNGELIDHILATRDLQLQLITIDSLVDDITSIG 291 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 + + DH P+ ++ Sbjct: 292 ASTRSRKKTVVPDHAPVIARFN 313 >gi|288920362|ref|ZP_06414673.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] gi|288348239|gb|EFC82505.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] Length = 484 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 95/297 (31%), Gaps = 24/297 (8%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + + + +WN+ + ++ D D D+ L E+ Sbjct: 36 PSQGSSTLLDVGNWNVEWFGATGYGPTNEALQQQNVRD------VMAGADMDVWGLSEVV 89 Query: 76 SYNAVAKVFPK-NTWCIFYSTERL----INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 S +A + + + + + + SN + A+ R ++ L Sbjct: 90 STSAFNTLVAGMPGYTGVVANDPIVTNGAQYYSDFSNTEQKVALVWRSSIATLVSAKVIL 149 Query: 131 LGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +F R + + + + + +H K+ D+ N +P+ +Q Sbjct: 150 TSQNSNFAGRPPVEFTLRGTFDGVTRDLVFIVLHAKAGSTQDAW-NLRNPA-------SQ 201 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNA 247 LK ++ + FVI GD+N ++ + + + + + FP S Sbjct: 202 ALKAYLDTTYPTQNVFVI-GDWNDDVDTSITSGNASPYANFVNDTARYTFPTRALSLAGV 260 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + S + + + SDH P+ YD+ Sbjct: 261 ASTASYSDFIDHQLTTNEVQAKYVTGSAKAFQ-PQAYVSNYATTTSDHYPVLARYDY 316 >gi|255322370|ref|ZP_05363516.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] gi|255300743|gb|EET80014.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] Length = 445 Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 102/301 (33%), Gaps = 69/301 (22%) Query: 21 AQKVRLVSWNINTL--SEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFL 71 ++++ ++N L ++ +G V ++ + + + K L+ADI+ L Sbjct: 24 GAELKIATFNAQNLFDAKNDGSEYNDFVVGKSEWNEKKASAKFKAVSAKIKELNADIIAL 83 Query: 72 QEMGSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + ++ + F +S ++ +AV L + P Sbjct: 84 QEIENEMILKELMKDAGYKYFAFSKDKNGP-----------VGLAV-------LSRIKPE 125 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 S R ++L E++G+K +L++H + + + L Sbjct: 126 KTQIFSVPNVKTRDILKLDFEVDGQKFSLLNLHFPAR---KNPLKQRKTAFITLKSTL-- 180 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA--N 248 I V+ GDFN + + + + + Sbjct: 181 ----IDA-----EKVVVLGDFN----TPYGDKELLGDL--------ATSKNLANLWVFLP 219 Query: 249 KNLRNKIP----IDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K+ R +D+ ++ ++A + SF I+ G ++SDH + + Sbjct: 220 KHERYSHTSLNALDHVLLSKDALSQNYVLNSFK--------IERDGAQISDHFALVFRLN 271 Query: 304 F 304 F Sbjct: 272 F 272 >gi|126665590|ref|ZP_01736572.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] gi|126630218|gb|EBA00834.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] Length = 536 Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 104/323 (32%), Gaps = 57/323 (17%) Query: 19 SVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDY-TLLRQYAKNLD---ADIVFLQ 72 + +R+++ N+N L + G + +T + Y L++ + L+ AD++ L Sbjct: 234 PTSANLRVMTLNLNNLFNGDGRGQGFPTSRGAKTQAQYKRQLQRLSAGLNQAGADLLALS 293 Query: 73 EMG-----SYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 E+ S +A+A++ W + + A+R + Sbjct: 294 ELENDGYGSNSAIAQLAASLGPHWRFVVPVDSAMQKD------------AIRNGLLY-RA 340 Query: 126 QSYPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-- 180 LG S G R ++ ++ G + ++ +HLKS C EN Sbjct: 341 DRVNALGPAQYLSGGGGRPSLTQRFALKSGGPSLRLVSVHLKSKSCRNARGENAQQNDGQ 400 Query: 181 -CSLLSQ--QAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 C + + QA+ L + Q +S +I GDFN + + + Sbjct: 401 GCYTVVRVKQAKTLHQQLGQLDKSNALAGTLITGDFN-----SYSKEQPISELARAGYTN 455 Query: 236 RFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 C + +D+ + ++ I ++ I Sbjct: 456 MVAHFH--PCTPVLCEHYSYRFKGARGSLDHALASAALKPRVLSAKVWNINADQPRIADY 513 Query: 289 GK-------RLSDHCPISIDYDF 304 R SDH P+ D Sbjct: 514 RSHSSPQPWRSSDHNPLITDIKL 536 >gi|81299809|ref|YP_400017.1| hypothetical protein Synpcc7942_1000 [Synechococcus elongatus PCC 7942] gi|81168690|gb|ABB57030.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 1076 Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 52/314 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNLD-ADIVFLQEMGS--- 76 ++ + ++N+ L + + + + + RQ NL+ DI+ LQE+ Sbjct: 637 DQLTVATYNVLNLDPNDNDGDADIANGQ----FAAIARQIINNLNSPDIIALQEVQDNSG 692 Query: 77 ----------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +A+A T+ + N S +I TA Sbjct: 693 SLNDGVTAANLTLQTLVDAIAAA-GGPTYAFIDNPFITNNASGGQPGANIRTAYLYDPSR 751 Query: 121 VRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHL--KSFC---FLDSLE 174 V ++ S +G++ AG R + E NG+ + +++ H K + Sbjct: 752 VSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPILGTAQP 811 Query: 175 NTYSPSCSLLS-------QQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFW 225 S ++ Q+Q ++D++ + + ++ GDFN D Sbjct: 812 FESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPVRD--- 868 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + N L + + N ID+ ++ + + + N + Sbjct: 869 --LAANTGLTNLTELLPENERYTFIFQGNSQSIDHILVSGS-----LANRAEIDIVNVNT 921 Query: 285 IKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 922 EFAESLQASDHDPV 935 >gi|56750554|ref|YP_171255.1| hypothetical protein syc0545_d [Synechococcus elongatus PCC 6301] gi|56685513|dbj|BAD78735.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 1088 Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 52/314 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNLD-ADIVFLQEMGS--- 76 ++ + ++N+ L + + + + + RQ NL+ DI+ LQE+ Sbjct: 649 DQLTVATYNVLNLDPNDNDGDADIANGQ----FAAIARQIINNLNSPDIIALQEVQDNSG 704 Query: 77 ----------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +A+A T+ + N S +I TA Sbjct: 705 SLNDGVTAANLTLQTLVDAIAAA-GGPTYAFIDNPFITNNASGGQPGANIRTAYLYDPSR 763 Query: 121 VRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHL--KSFC---FLDSLE 174 V ++ S +G++ AG R + E NG+ + +++ H K + Sbjct: 764 VSFVEDSLTTIGSQQPGEAFAGARLPLVADFEFNGETVTLVNNHFSSKGGSAPILGTAQP 823 Query: 175 NTYSPSCSLLS-------QQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFW 225 S ++ Q+Q ++D++ + + ++ GDFN D Sbjct: 824 FESRQEDSTVNGSLDDRQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPVRD--- 880 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + N L + + N ID+ ++ + + + N + Sbjct: 881 --LAANTGLTNLTELLPENERYTFIFQGNSQSIDHILVSGS-----LANRAEIDIVNVNT 933 Query: 285 IKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 934 EFAESLQASDHDPV 947 >gi|86141528|ref|ZP_01060074.1| probable secreted protein [Leeuwenhoekiella blandensis MED217] gi|85832087|gb|EAQ50542.1| probable secreted protein [Leeuwenhoekiella blandensis MED217] Length = 269 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 97/292 (33%), Gaps = 62/292 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +++++S+NI+ + + + D + + Q K+ DAD+V LQE+ Sbjct: 26 ATFENSSNQLKVLSYNIHH---------ANPPMHKDSIDLSAIIQVIKDSDADLVALQEI 76 Query: 75 GSY-------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 S N K+ +F+ K + +A+ + + + Sbjct: 77 DSDTQRSGSGNQAQKIGDALGMQVFF--------GKSIDFQNGAYGVAILSRFPIIASKV 128 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 Y L ++ A+ L+ + + IW HL DS + + +L Q Sbjct: 129 YKLPSKPETQGEPRV-LALSLIQLPDAQTIWFASTHL------DSQKEDTN---RIL--Q 176 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L + P ++AGDFN N ++D S C Sbjct: 177 IAEL---LNITTNLNQPVLVAGDFN-----AVANSPVIASLDS------VFTRTCSSCPP 222 Query: 248 NKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + N ID+ ++ L + Y SDH P+ Sbjct: 223 TIPVENPSKAIDFIAFKPKSFFRLNNHRVIDEHYA-----------SDHLPV 263 >gi|320104403|ref|YP_004179994.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751685|gb|ADV63445.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 356 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 83/328 (25%), Gaps = 62/328 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +V + +R+V+WN + L + VKR SD+ + + D++ LQE+ Sbjct: 48 TQPAVGRPIRIVTWNCDAL-------FTTDEVKRRKSDFINM---VAEVQPDVILLQEVT 97 Query: 76 SYN---AVAKVFPKNTWCIFYSTERLI--NHSKRDSNNDIHTA----IAVRKKNVRVLQQ 126 S AV V + N N + + + + Sbjct: 98 SQAVLEAVRDVIGWTKADGSPADAVCSSFNPDHTQEYNSLEVGVISRFPIVEAVEFDTEL 157 Query: 127 SYP----------LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 P L R L V + + + ++HLKS Sbjct: 158 DNPPSERQVVERQLTIPSRLNPPPNFRGRGFLRVRTSSPDLVLYNVHLKSS-RGQFGRQD 216 Query: 177 YSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW------KTID 229 + + L + +I GDFN I + W + Sbjct: 217 VNNAIQREYVMGALALDAAAIRVAFPNHDVIIGGDFNVGITDRDKLANSWEVEAARRKGQ 276 Query: 230 PNDSLIRFPKEKDSRC--------------NANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D C + ID +D Sbjct: 277 AYDRTHALLTGLIDGCRFRPLCEGVGETYVKGANRFKGAGAIDNLYVDGPHRDRFRPAKP 336 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + Y SDH P+ ++ Sbjct: 337 ARSSYG-----------SDHLPVWTEFT 353 >gi|86146808|ref|ZP_01065128.1| putative phospholipase C precursor [Vibrio sp. MED222] gi|85835458|gb|EAQ53596.1| putative phospholipase C precursor [Vibrio sp. MED222] Length = 444 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 97/298 (32%), Gaps = 48/298 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++++++NI L ++ + R Y L+ QY K D++ LQE+ Sbjct: 175 EPDANTLKVMTYNIWAL-----PAIASHIGDR----YDLIPQYVKGY--DVLALQEV--- 220 Query: 78 NAVAKVFPKNTWCIF--YSTERLINHSKRDSN-NDIHTA---IAVRKKNVRVLQQSYPLL 131 F S E D + +I+ I R V Q +P Sbjct: 221 ------FANGRDEFLRELSKEYPYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDC 274 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D F+ G A + NG+ V H SF + + +Q + L Sbjct: 275 TGTDCFADKGVNYAEIIK---NGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRQL 326 Query: 192 KDWITQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + V + GDFN + + + + + ++ + S + N Sbjct: 327 AQSLEIPTSETVIYS--GDFNVNKLKFPDDYQQMFANLQADEPT--YSGYTASTFDPRIN 382 Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY V+ + + ++ + + LSDH P+S Sbjct: 383 NFAGEPMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVS 440 >gi|154149223|ref|YP_001406798.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] gi|153805232|gb|ABS52239.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] Length = 437 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 104/307 (33%), Gaps = 56/307 (18%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ L+ T + A ++++ ++N+ L SE + ++ + Sbjct: 4 ILAILLFFTFAFASELKIATYNVENLFDAKVQGSEYNDFKNGNWNAEKYSFKLEKTVDVL 63 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K LDADIV LQE+ ++ + + K+ + + ++ N +AV + Sbjct: 64 KRLDADIVALQEIENFEVLKDLAQKSGYKFYKFSKSDKNSPF---------GVAVLSRIK 114 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDSLENTYS 178 YP + SR R + E I L K + + N Sbjct: 115 IKDTIFYP--PPLNIKSRDILR--CDFTFEGENFSIFVNHFLA---KKNAYSKRIANATQ 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S L ++ V+ GDFN +D I +L+ Sbjct: 168 LS--------SVL--------RNVKNVVVLGDFNTNYG----SDSLLNDIINRYNLVDLW 207 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--IKSRGKRLSDHC 296 K S + ++ ID+ ++ Q+ +K + + Y ++ + + SDH Sbjct: 208 KFLPS--IERISHQSGRAIDHILLSQDFFKNVT------LNYKDESFGVFDENFKNSDHL 259 Query: 297 PISIDYD 303 PI Sbjct: 260 PIFFTIS 266 >gi|332297419|ref|YP_004439341.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM 12168] gi|332180522|gb|AEE16210.1| Endonuclease/exonuclease/phosphatase [Treponema brennaborense DSM 12168] Length = 358 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 111/325 (34%), Gaps = 33/325 (10%) Query: 4 KYVLALVFFLVPCTASVAQK-VRLVSWNINTL--SEQEGVSLWKNSVKRT-------TSD 53 +L LVP + +R+VSWN+ T ++ G + T T+ Sbjct: 29 SLLLYGCGALVPGETGNSGTDIRVVSWNVQTFFDAQTAGTEYGEFRGPNTAWSLAKYTAR 88 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L K LDADI+ LQE+ + + + + F +++ + ++ D Sbjct: 89 LERLCGAIKRLDADILVLQEIENESVLRDIVN------FLASDNTYRYVCFAADGDGAIG 142 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-EINGKKIWVLDI-HLKSFCFLD 171 V + V + ++ + R +E+ V + VL I H KS Sbjct: 143 CGVLSRLPVVSGT-VHQVDSRIHGVQPSLRPLLEITVSNTADVPVCVLLICHWKSKAGGS 201 Query: 172 SLENTYSPSCSLLSQ-QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTI 228 + + L+ +A L + E+ +P V+ GDFNR I + D + Sbjct: 202 DAAAVWQAAQERLAAIRAAELLYAVLPADENRLPVVLCGDFNRDIGEFTEDGADGRAVCM 261 Query: 229 DPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---YKFLIQESFSEILYNED 283 D S D+ + N ID+F + + L + Sbjct: 262 DGVSLKSGWLSFSSADTGAGSYFYRNNWEKIDHFFIAGAIDFVDFKAESDGPWSRLSDTG 321 Query: 284 DIKSRGKRL------SDHCPISIDY 302 + L SDH PI+ + Sbjct: 322 VLVPFRYELWNGQGYSDHFPIAATF 346 >gi|84387306|ref|ZP_00990326.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84377755|gb|EAP94618.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 444 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 99/296 (33%), Gaps = 44/296 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 A ++++++NI L ++ + R Y L+ +Y K D++ LQE+ Sbjct: 175 EPDANTLKVMTYNIWAL-----PAIASHIGDR----YDLIPKYVKGY--DVLALQEVFAN 223 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLL 131 G + ++ + + + +I+ I R V Q +P Sbjct: 224 GRDEFLRELAKEYPYQTKMLDK---------DGINIYDGGVIIVSRYPIVNEAQYVFPDC 274 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D F+ G A + NG+ V H S F + Y +Q + L Sbjct: 275 TGTDCFADKGVNYAEVIK---NGQAYHVFGTHTAS--FDTNTARDYR---QRQFKQMRQL 326 Query: 192 KDWITQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS-------LIRFPKEKDS 243 + V + GDFN + + G+ + + ++ P+ + Sbjct: 327 AQSLEIPTSETVIYS--GDFNVNKLKFPGDYQQMFANLQADEPEYSGYTASTFDPRINNF 384 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY V+ + + ++ + + LSDH P+S Sbjct: 385 AGEPMSGGENVEYLDYVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVS 440 >gi|283779701|ref|YP_003370456.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283438154|gb|ADB16596.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 336 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 107/328 (32%), Gaps = 65/328 (19%) Query: 22 QKVRLVSWNINTLSEQE------GVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQE 73 +K+ + +WN+ ++ + + + R D+ L + + ++ I+ LQE Sbjct: 25 EKLVVATWNLEWFYDEHIGDNYMKLPKEQAAPTRADWDWKLNGIAKAIATINPTIIALQE 84 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINH---------SKRDSNNDIHTAIAVRKKNVRVL 124 + + +V + +++ +H D + AI + Sbjct: 85 IEN----RRVL------FYLTSKLKKDHNLTYRVAFIEGSDYFTEQDVAILYQSGLTSFS 134 Query: 125 QQSYP--LLGAKDSFSRAGNRRA-VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + +D + + A E + +K+ +L++HL++ + Sbjct: 135 WKEQTKEEFAVQDYYHLNKHLFAEFEWGPPEDREKLSILNLHLRA----------APDAA 184 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------------RKINYLGNNDDF 224 + ++Q + + W+ K + +I GD N R ++ +DD Sbjct: 185 DIRTRQGRLARKWMNDKILAGENVIIMGDLNTNDLWNNLAPDSDIGVIRGLDTPSTDDDL 244 Query: 225 WKTIDPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + T+ + + + + D + L+ + Sbjct: 245 FDTLSAVKEENPYTHLIFKQFDRILLSPSLTKDAPGKKDLVFKSATIRRDLVVNGKEQDT 304 Query: 280 YNED---DIKSRGKRLSDHCPISIDYDF 304 + + I + SDH P+ +++F Sbjct: 305 EHREIYWKIAEAERDFSDHYPLVTEFEF 332 >gi|115372829|ref|ZP_01460134.1| putative hemagglutinin-related protein [Stigmatella aurantiaca DW4/3-1] gi|310818499|ref|YP_003950857.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115370096|gb|EAU69026.1| putative hemagglutinin-related protein [Stigmatella aurantiaca DW4/3-1] gi|309391571|gb|ADO69030.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 526 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 96/292 (32%), Gaps = 28/292 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 + + +WN+ + + +R + D LQE+ G+ Sbjct: 248 PLSVGNWNLEWFGSTTNGPSDDSLQ------LSNVRAVMADAGIDFWALQEVVNAGTLAQ 301 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDSFS 138 + + P + R+I + + ++ A+ + V+VL L + Sbjct: 302 LKQAMPG-YDGFAANDSRVIYGASYYTASEQKPAVLFKSGTVQVLTAEIILTHFNYEFAG 360 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R + + + +++ + +H+K+ N + LK ++ + Sbjct: 361 RPPLQLRLRVTRGNTSLEMFAIILHMKAQTGGIDDYNQRKAA-------GAALKQYLDSQ 413 Query: 199 KESLVPFVIAGDFNRKIN---YLGNNDDF---WKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + V ++ GD+N ++ Y + ++ + +F S + Sbjct: 414 LSN-VRVIVLGDWNDDVDISIYRDSGSYLPSPYQNFVEAPASYQFLTMPLSVSGVGSTVG 472 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ + + S + I + SDH PI +DF Sbjct: 473 YSTFIDHQLISNELFGDYVGNSTQVLYPA---IPNYANTTSDHYPIQSRFDF 521 >gi|149188512|ref|ZP_01866805.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1] gi|148837730|gb|EDL54674.1| hypothetical protein VSAK1_20994 [Vibrio shilonii AK1] Length = 334 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 104/309 (33%), Gaps = 48/309 (15%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADI 68 + T + K+++ + N+ E + ++ T + L+Q L++D+ Sbjct: 1 MESNTLTQINKLKVTTCNLCNFVEPP-FAYYEMENIYTAKQWQQKTLWLKQTLSELNSDV 59 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V QE+ S A+ + + +++ + A A R VR + Sbjct: 60 VAFQEVFSVEALRALVKSLGYG-YFTYNTEPRLESGYIYSHPALAFASRYPIVR-----H 113 Query: 129 PLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSF---CFLDSLENTYSPSCSLL 184 L + F +R A+ + + I G ++ + ++HLKS ++L+N + L+ Sbjct: 114 SNLTSLAPFEGEFSRPALHISLNIEGIGELDMYNVHLKSKRPTLPDENLDNKSTVDAWLV 173 Query: 185 SQQAQWLKDWITQKKE-------------SLVPFVIAGDFNRKIN----------YLGNN 221 Q Q L + ++ PF++ GDFN I Y Sbjct: 174 ETQGQTLSSLMRIQEAGALHQAIVQNKRCYQRPFLLLGDFNNSIGSNEFEPFRSQYRHRR 233 Query: 222 DDFWKTIDP---NDSLIRFPKEKDSR----CNANKNLRN---KIPIDYFVMDQNAYKFLI 271 D I +DS PK K R +D+ ++ Sbjct: 234 KDTRADIKAYHFHDSWDLVPKGKPVRPVDEIKPPITHYYGESGSRLDHILLSSEFCSNYE 293 Query: 272 QESFSEILY 280 + F Y Sbjct: 294 RSMFEVTDY 302 >gi|212696938|ref|ZP_03305066.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM 7454] gi|212676026|gb|EEB35633.1| hypothetical protein ANHYDRO_01501 [Anaerococcus hydrogenalis DSM 7454] Length = 348 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 109/313 (34%), Gaps = 58/313 (18%) Query: 25 RLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 R+++WNI G ++ + + +KN++ADI QE+ Sbjct: 56 RVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIKLFQEVDY 115 Query: 75 GSYNA--VAKV-------FPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKNV 121 S + + +V +T+ + + T+ + K S TA ++K Sbjct: 116 DSKRSFHINQVDKLRENFLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQTAFKIKKSKR 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + RA N + ++ + KK+ ++++HL ++ + Sbjct: 176 YQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKGRVA----- 228 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWK-------TIDPND 232 Q + + D+I ++ + ++ GDFN++++ + W + N Sbjct: 229 -----QTKEIIDFINKEYKKGNYVLVGGDFNQELSAKFKKLPEGIWNPSPFPKEMLTKNI 283 Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 L K S N ID F+ N I+ E Sbjct: 284 KLYYDKNGKTSVVNDKPYTGKDAYLSTIDGFLATDNIKIKTIKTQTKE-----------N 332 Query: 290 KRLSDHCPISIDY 302 + SDH P+ +++ Sbjct: 333 FQYSDHNPVVMEF 345 >gi|108757277|ref|YP_635313.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108461157|gb|ABF86342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 996 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 90/297 (30%), Gaps = 29/297 (9%) Query: 19 SVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 + + + + WN+ + +G R ++ ++ L EM Sbjct: 547 TASAPLTVGHWNLEWFGAPTQGPP--------DDLQMAHARDIIRDSGVNVWGLVEMVDA 598 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + P + T + N + SN + I Q A Sbjct: 599 ADFATLKEQLPGFNGFLANDTSFVPNGTAYYSNGEQKPGILYDSTLTLQEAQLILTANAA 658 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R R V+ + V+ +HLK+ F + + + LK + Sbjct: 659 DFGGRPPLRVDFTTTVDGVSTPLVVIVVHLKA--FDNQTAYEQR------QRSSAALKSY 710 Query: 195 ITQKKESLVPFVIAGDFN----RKINYLGNNDDF---WKTIDPNDSLIRFPKEKDSRCNA 247 + S ++ GD+N + I + + + F E S Sbjct: 711 LDTSLPS-ERVLVIGDWNDDVDQSITQGSDGAPLPSPFAPFVADTQRYTFITEPLSLRGL 769 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ ++ + S + + I + G +SDH P+ YD Sbjct: 770 RTTVDYPDAIDHTLVSNELAANYLPGSVEILRPDA-WIPNYGDIVSDHYPVISSYDL 825 >gi|77163525|ref|YP_342051.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254436414|ref|ZP_05049919.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|300115646|ref|YP_003762220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsoni C-113] gi|76881839|gb|ABA56521.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207087948|gb|EDZ65222.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|299541588|gb|ADJ29899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 398 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 86/287 (29%), Gaps = 38/287 (13%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 AQ + SWN L + + + D+ V LQE+ S A Sbjct: 17 SAQAFTIASWNTKHLGWGDKRNWNATAAVVAPYDF--------------VALQEVMSKTA 62 Query: 80 VAKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V + + +S+ R A R++ V + + L D F Sbjct: 63 VNHLVQTLKKQTGVKWSSLVSGTSVGRSKRYQEFYAFIWREEAVDYVGGAVVYLDPGDIF 122 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +R A + + +H+ + DS + + QQ +W+ + Sbjct: 123 AREP--FAARFQTDNGKYRWTAATVHV---VYGDSRDERRREA-----QQLDEYVNWLEE 172 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P V+ GDFN + G D K + P R Sbjct: 173 NVAEGDPVVLMGDFNLPPDSAGFRD-LAKVLKPAIREGATTLSAKEG-------RYANLY 224 Query: 258 DYFVMDQNAYKFLIQ--ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D +A K + F + L K K +SDH P+ I Sbjct: 225 DNIWYRPDALKIQEARIDRFPQRLGITH--KLARKTVSDHAPVVIVL 269 >gi|237746873|ref|ZP_04577353.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378224|gb|EEO28315.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 321 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 108/313 (34%), Gaps = 43/313 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSY 77 Q++RL ++N+ L ++ + + T +Y + + DAD++ QE+ S Sbjct: 3 QEIRLATFNVRNLVL-PEIAYYDDLPPYTQEEYEAKTAWIAEKIDQSDADVIGFQEIFSK 61 Query: 78 NAVAKVFPKNT-WC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LL 131 A+ V K + I + L K +A + ++ + + L Sbjct: 62 QALNDVVAKTRHYREAHLICFDRNHLPAALKPQVALLSRFPLAGSPQTHQLFPRQFQITL 121 Query: 132 GAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSP--------SCS 182 D+ +R +E + NG+ + + +HLKS D + + Sbjct: 122 PITDTLINRFSRPVLEAPVFLPNGQILNIYVVHLKSK-RPDFVSFVNKSDPYQYGLAALR 180 Query: 183 LLSQQA------QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI- 235 L ++A + L ++ + +P I GDFN + + + L Sbjct: 181 SLMRRAADALGVRALVA--EFRQNNALPIAILGDFNDFSLAVSTRIVTGEEHESEQPLSP 238 Query: 236 ------RFPKEKDSRCNANKNLRNKI-----PIDYFVMDQ--NAYKFLIQESFSEILYNE 282 F + D + N + ID+ + + + +++Y + Sbjct: 239 FYRLYDCFEIQSDPDHHMNNLSQFLEENGTPRIDHIFVSEEFTEESGFLTGKIKKMVYLQ 298 Query: 283 DDIKSRGKRLSDH 295 +D LSDH Sbjct: 299 NDGDPDNPELSDH 311 >gi|237749022|ref|ZP_04579502.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380384|gb|EEO30475.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 321 Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 109/311 (35%), Gaps = 39/311 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSY 77 Q++RL ++N+ L + + + T +Y + + DAD++ QE+ S Sbjct: 3 QEIRLATFNVRNLVL-PDTAYYDDLAAYTHDEYEAKTEWIAKKIDQSDADVIGFQEIFSK 61 Query: 78 NAVAKVFPKNT-WC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LL 131 A+ V K+ + I + K +A ++ + + + L Sbjct: 62 KALEHVIEKSRLYRDAELICFDQNNPPATLKPQVALLTRLPLAGSPQSHKTFPRQFEITL 121 Query: 132 GAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL------- 183 ++ +R +E ++ NG+ + + +HLKS D L Sbjct: 122 PITETVINQFSRPVLEAPVLLPNGQILNIFVVHLKSK-RPDFLNFVNKSDPYQYGLAALR 180 Query: 184 --LSQQAQWLK--DWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--- 235 + + A L +++ ++ + +P I GDFN + + + L Sbjct: 181 SLMRRSADALGVRALVSEFRENNALPIAILGDFNDFSLAITTTIVSGQEHESEQPLPPFY 240 Query: 236 ----RFPKEKDSRCNANKNLRNKI-----PIDYFVMDQ--NAYKFLIQESFSEILYNEDD 284 + + D N +K LR ID+ + + I + ++Y ++ Sbjct: 241 KLYDCYEIQTDPAKNQDKILRFMEENGTARIDHIFVSEEFTPETGYITGAVKRMIYLPNE 300 Query: 285 IKSRGKRLSDH 295 +SDH Sbjct: 301 AGPERIEMSDH 311 >gi|90409139|ref|ZP_01217258.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3] gi|90309747|gb|EAS37913.1| hypothetical protein PCNPT3_10586 [Psychromonas sp. CNPT3] Length = 347 Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 107/346 (30%), Gaps = 67/346 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFL 71 CT +++ ++N+ + Q + + + + + Y D++ Sbjct: 6 CTTPTT-PIKICTFNLFNYA-QPPYAYYDFESIYSDVQWAKKQAWICAYLARFKPDVIAF 63 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL- 130 QE+ S +++ K+ + + ++S S D AIA R Sbjct: 64 QEVFSIDSLQKLLKEAGYA-YFSVVDAPTLSDGFIYRDPVLAIASRYPIKETYALGVDPT 122 Query: 131 ------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSL 183 L A SFSR R ++EL + +HLKS + + Sbjct: 123 LLAPLGLSADFSFSRKVLRASIEL---PHIGLCDFYVVHLKSKRSLFEYYPDAKERIEKT 179 Query: 184 ----LSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK-----INY 217 L Q W + ++++ +P V+ GDFN ++ Sbjct: 180 ILGRLKAQLS--GGWGSTVQRGSEALLLHMAILERREKLGLPVVLLGDFNNNLEDGVLSQ 237 Query: 218 LGNNDDFWKTIDPNDSL--------------IRFPKEKDSRCNANKNL-RNKIPIDYFVM 262 L ++ + T + P+ + C + + +D+ ++ Sbjct: 238 LLKHELRFVTGAQDKQYLDKYCLKNAWDLYQKADPERESQPCPGTHYFAQQWVTLDHILL 297 Query: 263 DQNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDY 302 Q FS ++ I ++ SDH + I Sbjct: 298 SSEFDTSASQCFFSVSAHHTHVQHLVCPIFEYDQQSSDHGVVMITL 343 >gi|124009803|ref|ZP_01694472.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] gi|123984211|gb|EAY24567.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] Length = 356 Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 35/223 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSL-----WKNSVKRTTSD-----YTLLRQYAKNL 64 T Q ++++SWN+ ++ + V R + D + + Sbjct: 36 APTLKAGQSLKVLSWNVQYMAGKGYVFFYDLLDNSGPDTRPSKDSISLTIKEVARIITQE 95 Query: 65 DADIVFLQEMGSYNA-------VAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 D DI+ LQE+ A + ++ + S D + + Sbjct: 96 DPDIILLQEIDEGAARTDKEDQLKRLLGLINKAYQCHCSAFYWKASFVPDPHVMGSVGMK 155 Query: 116 V----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 + + K ++ PL+ + +RAV K + VL+ HL +F Sbjct: 156 LSTISKYKISEGIRHQLPLIPQNFLVQQFYLKRAVLETKMPVEGNKDLLVLNTHLSAFAQ 215 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + QQ + + ++ + P+++ GDFN Sbjct: 216 GTN----------TMEQQVVHVNKMLKERTKQGHPWLLGGDFN 248 >gi|332667070|ref|YP_004449858.1| endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] gi|332335884|gb|AEE52985.1| Endonuclease/exonuclease/phosphatase [Haliscomenobacter hydrossis DSM 1100] Length = 1056 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 104/331 (31%), Gaps = 58/331 (17%) Query: 15 PCTASVAQKVRLVSWNINTL-----------SEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 P +A +++ ++N+ L + + +L ++ + + Sbjct: 571 PAPPKLAGDLKIATFNLLNLFNGDGNGGGFPTSRGASNLPAFRLQ-----LRKIITAIRR 625 Query: 64 LDADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 +DAD++ LQE+ + A+ ++ + T L + R + I I + K Sbjct: 626 MDADVLGLQEVENDGFGPRTAIQELVDSLNAVLGAGTYALSSPGVRFGADQIVVGI-IYK 684 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI-HLKSFCFLDSLENTY 177 +V P+ +S NR + + + L + HL+S + N Sbjct: 685 P-AKVTPDGGPVFLNSNSGIFQQNRLPLAQTFIDQRGEKFTLVVNHLRSKLGESTGLNAD 743 Query: 178 SPSCSLLSQQ-----AQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 Q Q + W+ + FV+ GDFN D ++ Sbjct: 744 ILDGQSAFNQVRTDAVQEILSWVQGDPTRSGDPDFVMLGDFN----AYEQEDPI-TLMEA 798 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQE--SFSEILYN 281 + + P + + +D+ K++I S S Y+ Sbjct: 799 SGYVNLVPAGQSKDFDG-----FLGDLDHIFASPSMAKQFVGGAKWIINSVESLSRFEYD 853 Query: 282 EDDIKSRGK--------RLSDHCPISIDYDF 304 D+ R SDH P+ + Sbjct: 854 AADLLPGTADDPIGDEFRCSDHDPVIAGFTL 884 >gi|149187906|ref|ZP_01866202.1| putative phospholipase C precursor [Vibrio shilonii AK1] gi|148838302|gb|EDL55243.1| putative phospholipase C precursor [Vibrio shilonii AK1] Length = 442 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 101/294 (34%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + R Y L+ +Y K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPEYVKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + +I+ I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDKE---------GINIYDGGVIIVSRYPIVNEAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + + +Q + L + Sbjct: 276 CFADKGVNYAEVIK---GGQAYHVFATHTASFDTDTARDYRQRQ-----FKQIRALAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + + +GDFN + + + ++ ++ ++ S + N Sbjct: 328 D--IPANEAVIYSGDFNVNKLKFPDDYQQMMTNLNVSEP--QYSGYTASTFDPRINDFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ D+ + LSDH P++ Sbjct: 384 GALSGGANVEYLDYVMVSNEYGTKSYNDNRVDVPRTTDESLWKHYNLSDHFPVT 437 >gi|295688634|ref|YP_003592327.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295430537|gb|ADG09709.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 323 Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 99/320 (30%), Gaps = 42/320 (13%) Query: 10 VFFLVPCTASVAQKVRLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + + +WNI L++ S +S +R L+ + Sbjct: 21 TVLAQIPPKTDGDNLLIGTWNIRAFGNLTKT-WASQPGDSPRRDFHACVLIAEVLSRF-- 77 Query: 67 DIVFLQEM-GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---- 119 DIV +QE+ + A+ + + + + V+ Sbjct: 78 DIVAIQEVKANLRALRHTLKRLGPDYGFVMTDVTYGQPGNGERLAYVFDTRRVKLSGLAC 137 Query: 120 -NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V P ++F R R + + + + ++ +H+ Sbjct: 138 ELVVPEDIDTPFSSPANAFQRQFVRTPYAVGFQAGEQTVVLVTLHVIYG-------AASQ 190 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-----IDPNDS 233 + L+ A+WL+ W Q+ + + GDFN + D W+ + P Sbjct: 191 DRVAELTGIAKWLRQWAEQEDDFGHNLIAMGDFN----IDRHGDPLWQAFTSTGLTPAPG 246 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFV----MDQNAYKFLIQESFSEILYNEDDIKSRG 289 L++ P+ S K D + Y L + + +K Sbjct: 247 LLKVPRTLSSS---LDTPDLKSFFDQIAWFETVRGRPYLSLKYRQAGGVNFQGVVLKDLN 303 Query: 290 K-----RLSDHCPISIDYDF 304 + R+SDH P+ +++ Sbjct: 304 RTELSWRISDHYPLWVEFGL 323 >gi|256425941|ref|YP_003126594.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588] gi|256040849|gb|ACU64393.1| hypothetical protein Cpin_6992 [Chitinophaga pinensis DSM 2588] Length = 1087 Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 93/318 (29%), Gaps = 54/318 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + + +++V+WNI + + + K +DADI L E+ Sbjct: 608 SGTSLRSLKVVNWNIEWFGSPVQNPANDSLQQ------ANVTTILKKMDADIFALAEVVD 661 Query: 77 YN---AVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQSYPLL 131 AVA P + S S +D + + A + ++ L+ L Sbjct: 662 TARFRAVANQMPG--YSYIISDFGSYADSIKDVDYVSAQKLAFLYKTSVIKGLRSYGVLR 719 Query: 132 GAKDS---FSRAGNRRAVEL----LVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCS 182 S ++ + R L + + I + +H K+ D +E+ Sbjct: 720 KGGSSNAYYNWSSGRFPFLLEAQAKLNNDSALIRFVLLHAKANTGTASDKIESWNRRR-- 777 Query: 183 LLSQQAQWLKDWITQKKESLVPF-----VIAGDFNRKINYLGNNDDFWKTIDPNDSL--- 234 + K V + VI GDFN + + P+ + Sbjct: 778 ---------NGALELKDSLDVQYPTANLVILGDFN-----DAFDKTITTELAPDTTTSYI 823 Query: 235 --------IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + S ID ++ + S E + Sbjct: 824 DFLNDSIHYKPVTLLLSLQGQQSTASFNTVIDNVLISDEMALSYLPGSARVRKEVETLVN 883 Query: 287 SRGKRLSDHCPISIDYDF 304 S +DH P+ +Y+ Sbjct: 884 SYSSTTTDHYPVQTNYNL 901 >gi|296446338|ref|ZP_06888283.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256111|gb|EFH03193.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 258 Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 97/306 (31%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L Y + + D++ LQE+ +A Sbjct: 1 MRIATWNVN------------SVRQR----LEQLTAYLREVAPDVLCLQEIKCEDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + ++ +A+ K + + P + +A R Sbjct: 42 FP----RLEIEE---LGYNVETHGQKTFNGVAILSKTPIEVVRGLPKF---EHDPQA--R 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLLSQQAQWLKDWITQKKE 200 +E +V + + V I+L + ++ + Y + C L Sbjct: 90 Y-IEAVVSTDRGALRVASIYLPNGNPPETEKYAYKLAFMDC---------LIAHAASLLA 139 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF---------------WKTIDP--NDSLIRFPKEKDS 243 P V+AGD+N +D ++ + +R + Sbjct: 140 LEEPVVLAGDYNVIPAARDVHDPAAWAGDALFLPQTRAKFQELTNLGYTEALRATTDAAG 199 Query: 244 -----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A RNK ID+ ++ A L + D G + SDH P Sbjct: 200 LYTFWDYQAGAWQRNKGIRIDHLLLSPQAADRLQSVTI-------DKNLRAGAKPSDHVP 252 Query: 298 ISIDYD 303 I + + Sbjct: 253 IRCELE 258 >gi|332528588|ref|ZP_08404570.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC 19624] gi|332041904|gb|EGI78248.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC 19624] Length = 264 Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 95/298 (31%), Gaps = 58/298 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A +R+ ++NI R + L + LDADIV LQE+ Sbjct: 15 PMAGHQAATLRVATYNI--------HKGVLGLGPRRRLEIHNLSLAVEQLDADIVCLQEV 66 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIAVRKK-NVRVLQQSYP 129 A + W + L + +T R + + +P Sbjct: 67 RKLNHREAAH----FSRWPELPQADYLAPEGYEAIYRTNAYT----RHGEHGNAMLSRWP 118 Query: 130 LLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 +L A S R R + +V ++G+ + VL +HL S + Sbjct: 119 VLSAGHEDMSDHRFEQRGLLHGVVSVHGQSVHVLVVHL--GLIRASRV-----------R 165 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA L +I ++ + P ++AGDFN D + + + C Sbjct: 166 QAAQLDQYIRREIPTEAPLIVAGDFN---------DWGERVHRHFERMGLQT------CE 210 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +D + L ++ R+SDH P+ ++ Sbjct: 211 PAAHPTFPARLPLVQLDYVYVRGLTP--LRVVVPR----GRAWWRMSDHLPLIAEFTL 262 >gi|226226101|ref|YP_002760207.1| hypothetical protein GAU_0695 [Gemmatimonas aurantiaca T-27] gi|226089292|dbj|BAH37737.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 322 Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 30/205 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A A V + +WN+ L Q +R D+ L+ + D+V +QE+ Sbjct: 33 AKTADTVLIATWNVANLGAQ----------QRRDEDFALIAEMLSWF--DLVAVQEVNDN 80 Query: 78 NA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A + ++ + S N + ++ V Y + Sbjct: 81 FADLAYIVQLMG-TKYRYVMSDASGNNERMAFVYDSRKVKLSEEIGEVAFPPSQYKSVSV 139 Query: 134 KDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + R + +L++HL + + + + + + Sbjct: 140 EGASGAFAGFDRSPYLGTFVAEHFSLTLLNVHLYFG--GEQEAHIHRRA-----LETAAV 192 Query: 192 KDWITQKKESL----VPFVIAGDFN 212 W + S + GDFN Sbjct: 193 ARWSRLRAASKYATTRDVLALGDFN 217 >gi|209694862|ref|YP_002262790.1| hypothetical protein VSAL_I1331 [Aliivibrio salmonicida LFI1238] gi|208008813|emb|CAQ79016.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 338 Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 98/344 (28%), Gaps = 80/344 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGSY 77 + + + N+ E + + T ++ + + L++D++ QE+ S Sbjct: 5 ESITFTTINMFNFVEPPN-AYYDFENILTQEEWQKKQDWFKNRITTLNSDVIGFQEVFSP 63 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+ + + F + + + + A A R V S P++ + Sbjct: 64 EALEALVNSLGYPYFCTVDEPKSEDGY-VFHSPVVAFASRYPIVS----SQPVIAKSEQL 118 Query: 138 SRAGNRRAVELLVEINGKKIWV------------LDIHLKSFCFLDSLENTYS---PSCS 182 +R G + E N + +H KS D +E S Sbjct: 119 ARFG------IEFEFNRVPVHASIDLPHLGVTDCYVVHFKSQRPKDPIEIDGIEEPESTP 172 Query: 183 LLSQQAQWLKDWIT-----------------QKKESLVPFVIAGDFN----RK-----IN 216 L + L W++ Q+K+S P V+ GDFN ++ Sbjct: 173 LTQLHDEQLGSWLSSAQRGLEANTLHQYITTQRKKSSQPVVLMGDFNKPLFHNEFIGLLS 232 Query: 217 YLGNNDDF-------------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 + D F W + + K +DY ++ Sbjct: 233 HQLRYDKFSTDYLTTFQLKDSWDIYSQLKGTDLLEERVSTHYYGAKG----SVLDYILLS 288 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRL------SDHCPISID 301 Y D+ R +DH +SI Sbjct: 289 NEFDSSYSGSLLEVTEYRVVDLHIVNPRFDIDQFSTDHALVSIT 332 >gi|254252251|ref|ZP_04945569.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124894860|gb|EAY68740.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 290 Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 115/312 (36%), Gaps = 58/312 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 +RL+ WNI + +G+ + RT +D L + D++ LQE+ Sbjct: 6 TMRLIDWNIQWGRDADGIV----DLSRTVADARRLGDF------DVLCLQEVTRGFGSLP 55 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSY 128 + +A + P + I + + ++ + AIA R RVL+Q Sbjct: 56 GGPGADQFAELAALLPG--YTIIDAIGADLPGAEPGAPRRQFGNAIATRLPVARVLRQLL 113 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCS 182 P D+ + + R A+++ + + V+ HL + +D+L + +C+ Sbjct: 114 PWPA--DADTPSMPRVALDVELHTASGPLRVVTTHLEFYSARQRIAQVDTLRERHREACA 171 Query: 183 LLSQQAQWLKD---WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++ A +I ++ GDFN +D + + ++P RF Sbjct: 172 HAARPAPAENADGPFIAT--GQPRDAIVCGDFNSAFG----SDAYRRFLEPIADAPRFV- 224 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKR 291 + C+A + + ++ + ++ D + SR R Sbjct: 225 DAWVACHAGHTPPPTAGVY------DTAQWSDGPLACDFVFVTDTLLSRVKRCEIDGDVR 278 Query: 292 LSDHCPISIDYD 303 SDH PI ++ D Sbjct: 279 ASDHQPIVLELD 290 >gi|218709697|ref|YP_002417318.1| putative phospholipase C precursor [Vibrio splendidus LGP32] gi|218322716|emb|CAV18892.1| putative phospholipase C precursor [Vibrio splendidus LGP32] Length = 444 Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 98/298 (32%), Gaps = 48/298 (16%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 A ++++++NI L ++ + R Y L+ QY K D++ LQE+ Sbjct: 175 EPDANTLKVITYNIWAL-----PAIASHIGDR----YDLIPQYVKGY--DVLALQEVFAN 223 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLL 131 G + ++ + + + +I+ I R V Q +P Sbjct: 224 GRDEFLRELAKEYPYQTKMLDK---------DGINIYDGGVIIVSRYPIVNEAQYVFPDC 274 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D F+ G A + NG+ V H SF + + +Q + L Sbjct: 275 TGTDCFADKGVNYAEVIK---NGQAYHVFGTHTASFDTDTARDYRQRQ-----FKQMRAL 326 Query: 192 KDWITQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + V + GDFN + + + + + + + S + N Sbjct: 327 AQSLNIPASETVVYS--GDFNVNKLKFPDDYQQMFANLQADKPT--YSGYTASTFDPRIN 382 Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY V+ ++ ++ + + LSDH P+S Sbjct: 383 NFAGEPMSGGENVEYLDYVVVSSEYAAKAHNDNRVDVPRSTSSELWKHYNLSDHFPVS 440 >gi|228919526|ref|ZP_04082890.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840169|gb|EEM85446.1| Sphingomyelinase C [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 333 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPKNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATLSM 332 >gi|262273941|ref|ZP_06051753.1| endonuclease/exonuclease/phosphatase family protein [Grimontia hollisae CIP 101886] gi|262221751|gb|EEY73064.1| endonuclease/exonuclease/phosphatase family protein [Grimontia hollisae CIP 101886] Length = 348 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 32/229 (13%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVF 70 A A ++L + N+ E G + ++ + + L +Y + DI+ Sbjct: 8 SSYAHSALGLKLATINLFNFIEPPG-AYYEFCNIYSEDQWRQKRAWLNRYIGSYQPDIIA 66 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ S +A+ + + F + + +A R + L Sbjct: 67 FQEVFSASALKALLEPLGYRFFAVVDE-PEPLEEYIYKSPVVCLASRYPILSALPLQADP 125 Query: 131 -----LGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKS-FCFLDSLENTYSPSCSL 183 LG + F + R + +E + + + +HLKS +D + P Sbjct: 126 AVSAKLGIHEHFQFS--RLPLFATLELPSLGQTDMYVVHLKSKRPVMDEVTEDSEPKKLA 183 Query: 184 LSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKI 215 S Q + W I ++ + P ++ GDFN + Sbjct: 184 DSMQEEIFGSWASAIQRGSEACHLMSSVIKRRSHTNNPAIVMGDFNDDL 232 >gi|329913211|ref|ZP_08275907.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium IMCC9480] gi|327545407|gb|EGF30623.1| hypothetical protein IMCC9480_1123 [Oxalobacteraceae bacterium IMCC9480] Length = 611 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 106/335 (31%), Gaps = 54/335 (16%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 V P A+V +R+ S N+ TL + S + S +R L Sbjct: 292 VVFTPANPRPPAPAAVGGTLRVASMNVLNYFTTLGARGAGSALELSRQRD-----KLVAA 346 Query: 61 AKNLDADIVFLQEM-GSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHT 112 LDAD++ L E+ + A+A + NT+ S + I Sbjct: 347 IAGLDADVLGLMEIENNPAALADLVGALNARLGDNTYAAIDSGVPGS--------DVIKV 398 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHL--KSFC 168 A+ + K + L + G R + N W++ HL KS C Sbjct: 399 AL-IYKPARVLTLGPRELPPTRGFLVDGGVRPPLAQHFAARDNNGSFWMVLSHLKSKSSC 457 Query: 169 FLD--SLENTYSPSC--SLLSQQAQWLKDWITQK--KESLVPFVIAGDFN--------RK 214 D S+E C + S+QA L W+ + ++ GDFN R Sbjct: 458 PSDTRSIERDRGQGCWNAARSRQAGALLQWVDTLVARSGDGDVLMLGDFNAYLDEDPIRT 517 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 I G+ D + + P + + R P + + + Sbjct: 518 IEAAGHAD-LLRRLPPAERYSYVFAGMAGALDHGFASRTLAP--H--VSGVTIWHANADE 572 Query: 275 FSEILYNEDDIKSRGK-----RLSDHCPISIDYDF 304 + + YN + R SDH P+ + Sbjct: 573 PAVLDYNTESKPDDRYAATPWRASDHDPVLVGLTL 607 >gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] Length = 331 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 112/339 (33%), Gaps = 67/339 (19%) Query: 24 VRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV----- 69 +RLV++N+ S +G + ++ V R + L + + LDAD + Sbjct: 1 MRLVTYNVEWFSSLFGADDTLLMDGGTSGRHGVDRDSQT-RALAEVFQRLDADGIMVIEA 59 Query: 70 -----------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L+ + I ++ + + +H A + R+ Sbjct: 60 PDTNNRRKTLRALEHFAQEAGLR----STKAVIGFANDTQQEIAFLYDPKVLHVAHSPRE 115 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRR---AVELLVEING-KKIWVLDIHLKS----FCFL 170 + + R +EL V NG ++I ++ HLKS Sbjct: 116 SAAAPRFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGARS 175 Query: 171 DSLENTYSPSCSLLSQ-QAQWLKDWITQKKESLVPFVIAGD-------------FNRKIN 216 D T S + QA WL+ + Q + V+ GD FNR Sbjct: 176 DDHAVTLSIANRRKQLAQAIWLRRRVEQLLAEGLDVVVMGDLNDGPGLDQYEQLFNRSSV 235 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-----KNLRNKIPIDYFVMDQN----AY 267 + D + DPN + P+ + +A +DY ++ A Sbjct: 236 EIAMESDLY---DPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAA 292 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 + I F + +D+ R L SDH P+S+D D Sbjct: 293 NWRIWHPFEDAA-CYEDVALREALLAASDHFPVSLDLDL 330 >gi|228956424|ref|ZP_04118235.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803257|gb|EEM50065.1| Sphingomyelinase C [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 348 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 119/318 (37%), Gaps = 59/318 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQTDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHC 296 YN+ SDHC Sbjct: 316 TYNDY---------SDHC 324 >gi|307311330|ref|ZP_07590973.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|307318863|ref|ZP_07598295.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306895584|gb|EFN26338.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306899631|gb|EFN30259.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 368 Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 119/368 (32%), Gaps = 89/368 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLL--RQYAKNLD----- 65 +RL ++NI L + S ++N +K R+ ++Y L + + D Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE + A+ + + + + N+ +AV Sbjct: 62 SALAIADCDADILCLQEADNMAALQAF--EYGYLFRMAGNGYRQKYLVEGNDSRGIDVAV 119 Query: 117 R----------------KKNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGK 155 K + + + L + + + R +E+ V I G+ Sbjct: 120 LMREETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGR 179 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDF 211 + + +HLKS + + ++ + + ++ I ++ F I GD Sbjct: 180 PLTLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAICGDM 239 Query: 212 N------------RKINYLGNNDDFWKTID--------PNDSLIRFPKEKDSRCNA-NKN 250 N R +++ +D N +L R ++ + ++ Sbjct: 240 NDYQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPE 299 Query: 251 LRNKIPIDYFVMDQNAYKFLIQ---------ESFSEILYNEDDIKSR------GKRLSDH 295 R+ +DY + + + + I +++ + SDH Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359 Query: 296 CPISIDYD 303 CP+ + D Sbjct: 360 CPVVMTLD 367 >gi|15965796|ref|NP_386149.1| hypothetical protein SMc04274 [Sinorhizobium meliloti 1021] gi|15075065|emb|CAC46622.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 368 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 120/368 (32%), Gaps = 89/368 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLL--RQYAKNLD----- 65 +RL ++NI L + S ++N +K R+ ++Y L + + D Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE + A+ + + + + N+ +AV Sbjct: 62 SALAIADCDADILCLQEADNMAALQAF--EYGYLFRMAGNGYRQKYLVEGNDSRGIDVAV 119 Query: 117 R----------------KKNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGK 155 K + + + L + + + R +E+ V I G+ Sbjct: 120 LMREETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGR 179 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDF 211 + + +HLKS + + ++ + + ++ I ++ F I+GD Sbjct: 180 PLTLYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAISGDM 239 Query: 212 N------------RKINYLGNNDDFWKTID--------PNDSLIRFPKEKDSRCNA-NKN 250 N R +++ +D N +L R ++ + ++ Sbjct: 240 NDYQEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRGPE 299 Query: 251 LRNKIPIDYFVMDQNAYKFLIQ---------ESFSEILYNEDDIKSR------GKRLSDH 295 R+ +DY + + + + I +++ + SDH Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359 Query: 296 CPISIDYD 303 CP+ + D Sbjct: 360 CPVVMTLD 367 >gi|256546090|ref|ZP_05473443.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus vaginalis ATCC 51170] gi|256398207|gb|EEU11831.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus vaginalis ATCC 51170] Length = 348 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 106/321 (33%), Gaps = 58/321 (18%) Query: 17 TASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + + +++WNI G ++ + + +K +++DI Sbjct: 48 NPEIGKSYTIMTWNIGYGGLDKDTDFFMDGGKMVFPINKSHVEKSINHIINSSKKINSDI 107 Query: 69 VFLQEMG-----------SYNAVAKVFPKNTWCI----FYSTERLINHSKRDSNNDIHTA 113 F QE+ K+ T+ + + + K +S T Sbjct: 108 KFFQEVDINSKRTYHINEYEKIRKKLLGNTTFALNFKAAFIPYPIPPMGKVESGIMTQTN 167 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 ++K + + + RA N + ++ + KK+ ++++HL ++ ++ Sbjct: 168 FKIQKSKRYQQEIPHKFPSRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYEKGNNG 225 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNNDDFWK----- 226 Q + + +++ ++ + ++ GDFN+++ NY + W Sbjct: 226 RIA----------QTKEIINFVNKEYKKGNYVIVGGDFNQELTGNYKELPEGIWNPKILP 275 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + N L + S N ID F+ N I+ Sbjct: 276 KELLTENIKLYYDKNGETSVVNDKPYTGKDAYLSTIDGFMATDNIKIKTIKTQ------- 328 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 + + SDH P+ +++ Sbjct: 329 ----EKENFQYSDHNPVVMEF 345 >gi|83312933|ref|YP_423197.1| hypothetical protein amb3834 [Magnetospirillum magneticum AMB-1] gi|82947774|dbj|BAE52638.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 330 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 75/341 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 +R+ ++N+ L E+ + + L+R + L AD++ LQE+ +++ Sbjct: 3 PLRIATFNLENLDERPAGGIDFDDR------VALMRPQFQRLRADVLCLQEVNTHSVTKS 56 Query: 79 ------AVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR------- 122 A+ ++ W +S R H N I + + +R Sbjct: 57 GPRLFTALDRLLAGTEYEHWHRVHSLNRGGVHPSDKHNLVIISKMPIRAHRQVWHDLVPP 116 Query: 123 -----VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS----------- 166 V P + + R + L G+ + V+++HL++ Sbjct: 117 CAYRPVRANPAPDEPQRVEWDRPILHAELGL---PGGRSLHVINVHLRAPRAVWLQGQKE 173 Query: 167 --FCFLDSLENTYSPSCSLLSQQAQWL------KDWITQKKESLVPFVIAGDFNRKINYL 218 +L + + Q Q L ++ + ++LV V+ GDFN Sbjct: 174 RFGRWLSVGGWAEGYFLAGVKQAGQALEVRLLVEEIFDARPDALV--VVCGDFN-----A 226 Query: 219 GNNDDFWKTIDPNDS-----------LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNA 266 G ++ + I +D L+ + + + +D+ ++ + Sbjct: 227 GEHEAGMRIIKGDDEDTGNGHLAMRMLVPLERSLPEGQRYSVIHHGRPVMLDHILVSRPL 286 Query: 267 YKF-LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 + L E +E L +E + S H P+ ++ Sbjct: 287 LGWYLGAEIHNETLGDELVSPATIHAPPESYHAPVVAEFSL 327 >gi|87308394|ref|ZP_01090535.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645] gi|87288951|gb|EAQ80844.1| extracellular nuclease, putative [Blastopirellula marina DSM 3645] Length = 430 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 99/320 (30%), Gaps = 46/320 (14%) Query: 2 IRKYVLALVFFLV---PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 +R L + L+ CT + A + + SWNI L G + S + +D L Sbjct: 1 MRTISLFIALSLLWITACTPASADIIHVGSWNIEWL----GKPEMRKSPPQKPAD---LA 53 Query: 59 QYAKNLDADIVFLQEM-GSYNAVAKVFPKNTWCI--FYSTERLIN------HSKRDSNND 109 D++ LQE+ ++ K + + + D Sbjct: 54 AEIDASGVDVLALQEICDDLPEHDRLGNKTLDEVCRLLNQRAGNQWKYELFPKRDIYAED 113 Query: 110 IHTAIA-----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 T +A V++ + LLG A + V+ +H+ Sbjct: 114 QLTGVAWNEARVQRVGGAMRITPVDLLGDNYITWDRQP-YAAKFSAGEGKTDFVVIPVHM 172 Query: 165 KSFCFLDSLENTYSPS--CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 KS S E + S L + +K +I GD N L ++ Sbjct: 173 KSNYGDSSGEMRKHRAAEASALIAELPAVKKMF-----GDEDIIILGDTN----ALSADE 223 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + P D ++ QN +F + E++++ Sbjct: 224 EGIQKFVKAGFRDLNSAD-------RSTHTKDAPFDRALVPQNQPEFA---NAREVIHSG 273 Query: 283 DDIKSRGKRLSDHCPISIDY 302 D + +LSDH IS Sbjct: 274 RDSRDYRNKLSDHYLISFQI 293 >gi|167644355|ref|YP_001682018.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167346785|gb|ABZ69520.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 266 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 75/253 (29%), Gaps = 31/253 (12%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + + D+V LQE+ A K + + H +++ Sbjct: 21 DVERVAEVIAAENPDVVALQELDVRRARTKGVDQAHRLAELLKMKSHFHPAMAVEEELY- 79 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A+ ++ L R A+ + VE+ G + +++ HL Sbjct: 80 GDAILTALPEKKVKAD-GLPLYTRIPGLEPRGAIWVTVEVGGVPVQIINTHL--GLVPQE 136 Query: 173 LENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 +QA L + W+ ++ P ++ GDFN + Sbjct: 137 Q-----------KRQAAALLGEQWM-AHEDWKAPGILLGDFNASPYSATYR--LLRAALR 182 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + +K + ID+ + + + + + Sbjct: 183 DAQTQSPTWKKTPTATFPSRFPF-MRIDHVFLTKGLETVNVSSPY----------GPLAR 231 Query: 291 RLSDHCPISIDYD 303 SDH P+ +D + Sbjct: 232 VASDHLPLVVDLE 244 >gi|228906427|ref|ZP_04070310.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200] gi|228853243|gb|EEM98017.1| Sphingomyelinase C [Bacillus thuringiensis IBL 200] Length = 333 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 114/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|228937917|ref|ZP_04100544.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228962244|ref|ZP_04123677.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str. T13001] gi|228970798|ref|ZP_04131438.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977373|ref|ZP_04137768.1| Sphingomyelinase C [Bacillus thuringiensis Bt407] gi|228782350|gb|EEM30533.1| Sphingomyelinase C [Bacillus thuringiensis Bt407] gi|228788923|gb|EEM36862.1| Sphingomyelinase C [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228797413|gb|EEM44593.1| Sphingomyelinase C [Bacillus thuringiensis serovar pakistani str. T13001] gi|228821708|gb|EEM67709.1| Sphingomyelinase C [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938397|gb|AEA14293.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar chinensis CT-43] Length = 348 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 113/309 (36%), Gaps = 41/309 (13%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHC 296 SDHC Sbjct: 316 TYNDYSDHC 324 >gi|229077987|ref|ZP_04210596.1| Sphingomyelinase C [Bacillus cereus Rock4-2] gi|228705325|gb|EEL57702.1| Sphingomyelinase C [Bacillus cereus Rock4-2] Length = 333 Score = 63.6 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 120/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSPN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 YN+ SDH P+ Sbjct: 316 TYNDY---------SDHYPVEATISM 332 >gi|229108284|ref|ZP_04237904.1| Sphingomyelinase C [Bacillus cereus Rock1-15] gi|228675169|gb|EEL30393.1| Sphingomyelinase C [Bacillus cereus Rock1-15] Length = 333 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 115/316 (36%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN NND +KT++ + + Sbjct: 197 NQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGYT 256 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 257 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 316 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 317 YNDYSDHYPVEATISM 332 >gi|325845943|ref|ZP_08169141.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481849|gb|EGC84881.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 348 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 105/313 (33%), Gaps = 58/313 (18%) Query: 25 RLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG- 75 R+++WNI G ++ + + +KN++ADI QE+ Sbjct: 56 RVMTWNIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIKLFQEVDY 115 Query: 76 ----------SYNAVAKVFPKNTWCIFYSTE----RLINHSKRDSNNDIHTAIAVRKKNV 121 + +T+ + + T+ + K S + ++K Sbjct: 116 DSKRSFHINQVEKLRENLLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQSDFEIKKSKR 175 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + + RA N + ++ + KK+ ++++HL ++ + Sbjct: 176 YQQEIPHKFPTRLVNLKRAFN--PSYIDIKNSDKKLVIVNVHLDAYESGNKGRVA----- 228 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNNDDFWK-------TIDPND 232 Q + + D++ ++ + ++ GDFN++++ Y + W + N Sbjct: 229 -----QTKEIIDFVNKEYKKGNYVLVGGDFNQELSGKYKKLPEGIWNPSPFPKEMLTKNI 283 Query: 233 SLIRFPKEKDSRCNANKNL---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 L K S N ID F+ N I+ E Sbjct: 284 KLYYDKNGKTSVVNDKPYTGKDAYLSTIDGFLATDNIKIKTIKTQAKE-----------N 332 Query: 290 KRLSDHCPISIDY 302 + SDH P+ +++ Sbjct: 333 FQYSDHNPVVMEF 345 >gi|153839235|ref|ZP_01991902.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] gi|149747230|gb|EDM58218.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] Length = 434 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 100/294 (34%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++L+++NI L ++ + R Y L+ Y K D++ LQE+ +A Sbjct: 168 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPDYVKGY--DVLALQEVFASGRDA 216 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKD 135 + K+ + + + +++ V R V Q +P D Sbjct: 217 FLRELAKDYPYQTKMLDK---------DDFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTD 267 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E QQ + + + Sbjct: 268 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSL 319 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + ++ S + N Sbjct: 320 N--IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEP--QYSGYTASTFDPRINNFAG 375 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 376 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVS 429 >gi|218662538|ref|ZP_03518468.1| hypothetical protein RetlI_25420 [Rhizobium etli IE4771] Length = 212 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 A+++ ADI+ QE+ AV +V P + + + I A+ Sbjct: 105 IARSIPADIIAFQEVSGEQAVREVLPNGGSDYDF------CPVTGYKVQRLVIAWKKALG 158 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +K ++ + L D R + L ++I+GK + ++D+HLKS C Sbjct: 159 EKVSCAIEDALSLPANPD---DKRPRPGLALTLKIDGKLLRIMDVHLKSSC 206 >gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 276 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 104/304 (34%), Gaps = 82/304 (26%) Query: 22 QKVRLVSWNIN---------TLSEQEGVSLWKNSVKRTTSDY--TLLRQYAKNLDADIVF 70 +++R++S+NI + W +S + D +L QY D+V Sbjct: 26 RQLRVMSYNIQSGLETRRYHHYVTRGWQHFWPSSSREGNLDRMGHMLHQY------DLVG 79 Query: 71 LQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 LQE+ + +A+ W +Y T R + + SN + R + Sbjct: 80 LQEVDAGSFRTGYVNQVEYLARRGTFPYW--YYQTNRNLGRLAQHSN-----GLLTRYRP 132 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + P R R A+ L G+ + V+ +HL + + + Sbjct: 133 ASIDEHALP--------GRVPGRGALHLRFGGAGEALNVIIVHL--------ALSRRARA 176 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 Q +L D I + + ++ GDFN + + T+ L+ + Sbjct: 177 -----TQLAYLADLINEHR----HVIVMGDFN-----CHSRSPEFTTLVDRTELLEPVHD 222 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + + + ID+ ++ + ++ LSDH PI++ Sbjct: 223 L----HTFPSWKPQRNIDHILLSSS--------------LEVGHVRVLDYPLSDHLPITM 264 Query: 301 DYDF 304 D Sbjct: 265 DISL 268 >gi|110634038|ref|YP_674246.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1] gi|110285022|gb|ABG63081.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1] Length = 262 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 85/302 (28%), Gaps = 67/302 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L + + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IENLVHWLQEANPDIVCLQEIKSL------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +A + L+ G + R Sbjct: 39 ----DEQFPREPIEALGYHVETHGQKGFNGVA----LLSKLRFDEVSRGLPGNDGDEQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + G + V ++L + + S + Y + L+ W ++ Sbjct: 91 F-IEGVFSTEGGALRVASLYLPNGNPIASEKFAYKLA------WMDRLELWAKRRLMLEE 143 Query: 204 PFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNANKNLR 252 P V+AGD+N + + + +S F S N Sbjct: 144 PLVLAGDYNVIPEPADAKNPENWLGDALYQPESRQAFRRLCNLGFTDALRSATNEPGTYT 203 Query: 253 NKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ A + S + ++ SDH P+ + Sbjct: 204 FWDYQAGAWQKNNGIRIDHLMLSPEAADRIASASVQKHT-------RAWEKPSDHVPVVV 256 Query: 301 DY 302 D Sbjct: 257 DL 258 >gi|256828980|ref|YP_003157708.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] gi|256578156|gb|ACU89292.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] Length = 837 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 101/296 (34%), Gaps = 56/296 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A +++VR++++N+ V + + + + D+V LQE+ Sbjct: 561 SQAPHSEQVRVMTYNV-----HSCVGIDGKLAA------ERIARVIAQANPDVVALQELD 609 Query: 76 SYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + A + ++ I + E + + A+ + +S PL G Sbjct: 610 AGRA--RTGGEDQAQRIAHYLEMQHHFHPHIHVENEKYGDAILTHLPMRIIKSGPLPGHL 667 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--K 192 + R A+ + ++++G ++ +++ HL L + Q + L Sbjct: 668 -PGGKLEPRGAIWVAIDLHGTEVNIVNTHL-------GLTSRERV------LQIEALLGD 713 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKN 250 DW+ + + P ++ GDFN + G ++ +D L + Sbjct: 714 DWLG-RLNADQPVILCGDFNCVPSSKGYK--LMRSRFLDAQAELKEY--------RPVCT 762 Query: 251 LRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +++P ID+ + ++ K SDH P+ D Sbjct: 763 FYSRLPSFRIDHVFIQPGI----------QVTGITVPCSELAKVASDHLPLIADLT 808 >gi|218895728|ref|YP_002444139.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842] gi|218542554|gb|ACK94948.1| sphingomyelin phosphodiesterase C [Bacillus cereus G9842] Length = 333 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|189096065|pdb|2UYR|X Chain X, Crystal Structure Of Bacillus Cereus Sphingomyelinase Mutant :n57a Length = 306 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 114/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 2 ASTTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 55 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 56 DASASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 115 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 116 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 168 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 169 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 228 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 229 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 288 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 289 TYNDYSDHYPVEATISM 305 >gi|167647627|ref|YP_001685290.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167350057|gb|ABZ72792.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 1052 Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 87/310 (28%), Gaps = 54/310 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNL-DADIVFLQEMG 75 + A K+ + ++N+ L + + + + A NL DI+ +QE+ Sbjct: 587 TAAADKLTIATYNLENLDPTDSA-----------AKFQSIAFDIANNLHHPDIIGVQEIQ 635 Query: 76 SY-----------NAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTAI--- 114 A A+V + + + + +I Sbjct: 636 DADGAGSGSNLSGAATAQVLINAIVAAGGPRYTYVEVAPTVAGSTGGEPGGNIRNGFLYD 695 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF------C 168 A R + V + + + +R + N + I + +H S Sbjct: 696 ASRVQYVDGSARLVLDTDLTNGNAFNNSRNPLAADFVFNDETITAVSVHSTSRGGSGPLF 755 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDFWK 226 D + QA L ++ + + + GDFN Y Sbjct: 756 GADQPAIVAGDASRT--AQAVELTKFVNTLEATNPDHHVAVMGDFN---GYYFET--ALA 808 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ N +L K + D ++ ++ F + N + + Sbjct: 809 GLEANANLYNLAKSLPVEERYSYKFEGYAQLFDNILVSKDLQSV---SEFDIVHLNSEQL 865 Query: 286 KSRGKRLSDH 295 S SDH Sbjct: 866 PSAQVS-SDH 874 >gi|260598074|ref|YP_003210645.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] gi|260217251|emb|CBA31170.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] Length = 370 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 89/269 (33%), Gaps = 41/269 (15%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVA-------KVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + +L+AD++ + E S A+A + + + R + + Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMV---IDGNDSRGIDVGL 175 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 T A + FSR +V L NG +WV+ HLKS + Sbjct: 176 LTG-AEYPIGPMRSHVDDRDARGQLIFSRDCPEYSVPL---ANGDTLWVMVNHLKSKGYG 231 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTID 229 E+ QAQ + D ++++ F+ IAGDFN +D + Sbjct: 232 GKAESDARR-----KAQAQRVADIYKARRDAGEQFIAIAGDFNDT----PESDTLAPLLK 282 Query: 230 PNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF--------- 275 D F N NK +DY ++ ++ + Sbjct: 283 ETDLRDAFTHPAFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGE 340 Query: 276 SEILYNE-DDIKSRGKRLSDHCPISIDYD 303 + ++ ++K + SDH + +D + Sbjct: 341 RPVKWDVYPELKKPQQAGSDHAALWVDLN 369 >gi|300022777|ref|YP_003755388.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] gi|299524598|gb|ADJ23067.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] Length = 260 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 91/312 (29%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 L +WNIN R S T Y + D++ QE+ S + FP Sbjct: 3 LATWNIN------------GVKARLESALT----YLRQQSPDVICFQEIKSVDDG---FP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + I ++ + +A+ K+ D +R Sbjct: 44 TSAFQ-------DIGYNVATNGQKGFNGVAILSKSPLEDVVRGLPGDDADQHARW----- 91 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-------TQK 198 +E V + + + V+ ++L + + + + +Y + W+ Q Sbjct: 92 IEASVPLGDRMVRVVSLYLPNGNPIGTEKFSYKLA-------------WMARMRLRAKQL 138 Query: 199 KESLVPFVIAGDFN---------RKINYLGNNDDFWKTIDPNDSLIRFP------KEKDS 243 ++ +P V+AGDFN R ++ ND ++ P + Sbjct: 139 QQDEMPLVLAGDFNVIPESVDAKRPAAWV--NDALFQ---PESRAAWRTLVNEGFTDATR 193 Query: 244 RCNANKNLRNKI-------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 C+ + ID+ ++ A L+ D + Sbjct: 194 ACHPGPGVYTFWDYQAGAFQKDDGIRIDHILLSSQAADLLVASGI-------DRATRAQE 246 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 247 KPSDHVPVWVKL 258 >gi|30018853|ref|NP_830484.1| sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579] gi|229042535|ref|ZP_04190279.1| Sphingomyelinase C [Bacillus cereus AH676] gi|229126103|ref|ZP_04255125.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4] gi|229143400|ref|ZP_04271830.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24] gi|29894395|gb|AAP07685.1| Sphingomyelin phosphodiesterase [Bacillus cereus ATCC 14579] gi|228640067|gb|EEK96467.1| Sphingomyelinase C [Bacillus cereus BDRD-ST24] gi|228657425|gb|EEL13241.1| Sphingomyelinase C [Bacillus cereus BDRD-Cer4] gi|228726807|gb|EEL78020.1| Sphingomyelinase C [Bacillus cereus AH676] Length = 333 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 197 NQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHT 256 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 257 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 316 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 317 YNDYSDHYPVEATISM 332 >gi|229068359|ref|ZP_04201662.1| Sphingomyelinase C [Bacillus cereus F65185] gi|228714820|gb|EEL66692.1| Sphingomyelinase C [Bacillus cereus F65185] Length = 333 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|296501428|ref|YP_003663128.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171] gi|296322480|gb|ADH05408.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis BMB171] Length = 333 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 114/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|260901207|ref|ZP_05909602.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308106699|gb|EFO44239.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] Length = 442 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 100/294 (34%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++L+++NI L ++ + +R Y L+ Y K D++ LQE+ +A Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGER----YELIPDYIKGY--DVLALQEVFASGRDA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKD 135 + K+ + + +++ V R V Q +P D Sbjct: 225 FLRELAKDYPYQTKMLDK---------DGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E QQ + + + Sbjct: 276 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + ++ S + N Sbjct: 328 N--IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEP--QYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVS 437 >gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 339 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 113/338 (33%), Gaps = 59/338 (17%) Query: 21 AQKVRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 A +RLV++N+ S +G + ++ V R L Q K+LDAD + + Sbjct: 6 AVAMRLVTYNVEWFSSLFGADDRLLMDGGTSGRHGVDRDRQA-RALAQVFKHLDADGIMV 64 Query: 72 QEMGSYNAVAKVF-PKNTWCIFYSTERLINHSKRDSNNDIHTAI-----AVRKKNVRVLQ 125 E N K + ++ A +R + Sbjct: 65 IEAPDTNNRRKTLRALEHFAKEAGLRSTEAVIGFANDTQQEIAFLYDPKVLRVAHTPGDS 124 Query: 126 QSYPLLGAKDSF------SRAGNRR---AVELLVEING-KKIWVLDIHLKSFCFLDSLEN 175 P + R +EL V NG ++I ++ HLKS + Sbjct: 125 DEAPRFDGVFHIDLDVDAQKDAVRFSKPPLELTVTTNGGREISLIGAHLKSKAPHGARSE 184 Query: 176 TYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGD-------------FNRKINY 217 ++ + S+ ++ QA WL+ + Q ++ GD FNR Sbjct: 185 DHAVTLSIANRRKQLAQAIWLRRRVEQLLAEGRDVMVMGDLNDGPGLDQYEQLFNRSSVE 244 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-----KNLRNKIPIDYFVMDQN----AYK 268 + D + DPN + P+ + +A +DY ++ A Sbjct: 245 IVMESDLY---DPNAQSLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAAS 301 Query: 269 FLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 + I F + +D+ R L SDH P+S+D D Sbjct: 302 WRIWHPFEDAA-CYEDVALREALLAASDHFPVSLDLDL 338 >gi|126739194|ref|ZP_01754888.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] gi|126719811|gb|EBA16519.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] Length = 331 Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 116/336 (34%), Gaps = 61/336 (18%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTTSD-YT---LLRQYAKNLDAD-IVFLQ-- 72 +RL ++N+ + Q+ + L + R D Y+ L + LDAD I+ ++ Sbjct: 1 MRLATYNVEWFANLFGPQDQLLLDDHPSGRYGIDRYSQAMALAAVFQRLDADAILVVEAP 60 Query: 73 ----EMGSYNAVAKV--------------FPKNTWC-IFYSTERLINHSKRDSNNDIHTA 113 E S A+A F +T I + + + D + Sbjct: 61 NTGREQRSTRALANFAAEAGLRTSEAIAGFANDTHQEIALLYDPAVLSVRHDPKSAPK-- 118 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A R V + + FS+ A+ +G+ I ++ HLKS + Sbjct: 119 -APRFDGVFRIDLDVDDQMDEVRFSKPPLELALT---TKSGRAIRLIGAHLKSKAPHGAR 174 Query: 174 ENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN--------RKINYLGN 220 S+ ++ QA WL + Q ++ ++ GD N ++ + Sbjct: 175 NEEDVVQISIANRRKQLAQAIWLHRRVKQHVQAREDLIVLGDLNDGPGLDEYERLFGRSS 234 Query: 221 NDDFWKT--IDPNDSLIRFPKEKDSR-----CNANKNLRNKIPIDYFVMDQ----NAYKF 269 + DP+ + P+ N +DY ++ K+ Sbjct: 235 VEIVMGQELTDPHAQSLLKPRRHVLPSTSRFFNPETKRYFSALLDYVMISNSLLSGEPKW 294 Query: 270 LIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 I F + Y ++D+++ SDH P+++D + Sbjct: 295 RIWHPFEDAECYEDEDLRNALLAASDHFPVTLDLNL 330 >gi|206967557|ref|ZP_03228513.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134] gi|206736477|gb|EDZ53624.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH1134] Length = 333 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 119/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 YN+ SDH P+ Sbjct: 316 TYNDY---------SDHYPVEATISM 332 >gi|87119222|ref|ZP_01075120.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121] gi|86165613|gb|EAQ66880.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121] Length = 449 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 20/272 (7%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90 +N L+ L + K T+ + +Y + D+V QE+ AK F Sbjct: 179 LNVLTYNTWALLPPLASKNTSDRLDTIAEYMTHY--DVVVFQEVFDPILTAK-FRAKVAQ 235 Query: 91 IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150 + ++ + I T + + Q + A + + Sbjct: 236 TYPYMTQIPWQVGK-----ILTGGSFIASRWPIEAQDAVVYDACRGDGCLAAKGMNYAKI 290 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAG 209 + H + ++ +Q LK +I K+ P ++AG Sbjct: 291 RKGSNVFHIFGTH--------THAYASEQDITVRFEQLAQLKRFIESKQIPYQEPVIMAG 342 Query: 210 DFN-RKINYLGNNDDFWKTIDPNDS--LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 DFN KINY + DF ++ + +P N + +DY + + Sbjct: 343 DFNVDKINYPQEHLDFLALLNATEPEATGAYPYSYAGPVNIYADEAFNEYLDYVLYSNDH 402 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 E+ + D + LSDH P+ Sbjct: 403 IAPYASENKMLTPRSIDSQHWQSWDLSDHYPV 434 >gi|218235530|ref|YP_002365468.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264] gi|218163487|gb|ACK63479.1| sphingomyelin phosphodiesterase C [Bacillus cereus B4264] Length = 333 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 197 DQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHT 256 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 257 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 316 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 317 YNDYSDHYPVEATISM 332 >gi|45124783|emb|CAF33353.1| sphingomyelinase C [Bacillus cereus] Length = 338 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 113/316 (35%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 35 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 88 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 89 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 148 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 149 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 201 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 202 DQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHT 261 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 262 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 321 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 322 YNDYSDHYPVEATISM 337 >gi|228899360|ref|ZP_04063622.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222] gi|228860266|gb|EEN04664.1| Sphingomyelinase C [Bacillus thuringiensis IBL 4222] Length = 333 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|150397136|ref|YP_001327603.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150028651|gb|ABR60768.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 368 Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 118/368 (32%), Gaps = 89/368 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLL--RQYAKNLD----- 65 +RL ++NI L + S ++N +K R+ ++Y L + + D Sbjct: 2 SLRLATFNIENLMSRFDFSGFRNHLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDVRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE + A+ + + + N+ +AV Sbjct: 62 SALAIADCDADILCLQEADNMAALQAF--EYGYLFRMVGNGYRQKYLVEGNDTRGIDVAV 119 Query: 117 R----------------KKNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGK 155 K + + + L + + + R +E+ V I G+ Sbjct: 120 MMREETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGR 179 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDF 211 + + +HLKS + + ++ + + ++ I + S F + GD Sbjct: 180 PLTLYVVHLKSMGPAREGLDGRQATMAVRRAEVKAVRHIIEGRFGSGDTADKIFAVCGDM 239 Query: 212 N---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP------------ 256 N K+N LG+ + ++ + ++ N LR + Sbjct: 240 NDYQEKVNVLGDRRNGYEFVPYEETSSALDVLSHDGFVVNPMLRRPVLDRWTLFHSRGPE 299 Query: 257 ------IDYFVMDQNAYKFLIQ---------ESFSEILYNEDDIKSR------GKRLSDH 295 +DY + Q + + + I +++ + SDH Sbjct: 300 ERHLCQLDYIWLSQELARRNAARVPEVIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359 Query: 296 CPISIDYD 303 CP+ + D Sbjct: 360 CPVVMTLD 367 >gi|284121624|ref|ZP_06386820.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] gi|283829405|gb|EFC33793.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] Length = 378 Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 102/315 (32%), Gaps = 48/315 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 +R+ +WNI +S+ T D L + D++ +QE Sbjct: 78 VPERDTLRVGTWNIRWFPYGSPPDRPDHSMAPT--DLVWLTCTLVWMQTDLLVIQESLTT 135 Query: 75 -GSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + A +V + W +S + + A V ++ L + Sbjct: 136 SEARAAWDRVLTTLAQQTGDVWQ--WSVQSCGRPDGHHVGV-LWNASRVTLSTMQSLWRL 192 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGK---KIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + G R V+ + V+ +HLKS + ++ + + L Sbjct: 193 NSKATSSQEPCKGGLRPGHYARVQSTHQHGADFHVIGLHLKSGPTVSAVGERH----AAL 248 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ + ++ Q +I GD +N +G D L R +++ Sbjct: 249 NRIDTAVARFLEQ----DRDVIILGD----LNTMGAGDRH-SQRSELKYLRRMVAKEEPG 299 Query: 245 C-----NANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILY--------NEDDIKSR 288 + + +D+ ++ ++ + S Y + + Sbjct: 300 FDDLSPKPRCSHYFRGRGEWLDHVLVAKD-MTEMRTRSARVTGYCAVAGCRRIKGEYPPA 358 Query: 289 GKRLSDHCPISIDYD 303 +RLSDHCP+ I+ D Sbjct: 359 YRRLSDHCPVIIEID 373 >gi|254718977|ref|ZP_05180788.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|265983967|ref|ZP_06096702.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|264662559|gb|EEZ32820.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] Length = 260 Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 99/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGVYST---DNGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKERLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|188584031|ref|YP_001927476.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] gi|179347529|gb|ACB82941.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] Length = 283 Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 94/302 (31%), Gaps = 73/302 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ +RL+++N+ +G + + L+ DIV LQE+ Sbjct: 24 APEPAGSRPLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALEPDIVALQEV 72 Query: 75 ----------GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVR 122 A+A++ S+ ++ + + + T ++ Sbjct: 73 DVGRARTGGLDQAEAIARLVG-------MSSHFHPALHVEEERYGDALLT-------HLP 118 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + L R A+ + + ++ VL H F + Sbjct: 119 SRLRRADALPGLVRRPGLEPRGALWAEITVGTARLQVLTTH-----FGLLGAERIA---- 169 Query: 183 LLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QA+ L DW+ P V+ GDFN + + + R E Sbjct: 170 ----QAEALLGPDWLGD-PACREPVVLLGDFNAT-GWSRAYRRLGRRL---TDARRLTGE 220 Query: 241 KDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHC 296 + R + +++P ID+ + + I + + RL SDH Sbjct: 221 RRWR-RGTASFPSRLPLLRIDHVFVSEGVRVDRIA-----------VVDTPLARLASDHL 268 Query: 297 PI 298 P+ Sbjct: 269 PV 270 >gi|85711283|ref|ZP_01042342.1| Extracellular nuclease [Idiomarina baltica OS145] gi|85694784|gb|EAQ32723.1| Extracellular nuclease [Idiomarina baltica OS145] Length = 577 Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 112/325 (34%), Gaps = 70/325 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEM 74 + +R+ S+N+ L +R + ++ + DAD+ L E+ Sbjct: 281 EYLRISSFNVLNL-FNGDGDKNGFPTERGAKSFDAYQRQQAKIVSALVDIDADVFGLMEV 339 Query: 75 G-----SYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 S +A+ ++ + + I ++R ++ I + + V+ Sbjct: 340 ENDGYGSDSAIVQLVNQLNEAQDSPYVI------AEPRAQRLGDDQIAVGLIYNRNRVKP 393 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS--FCFLDSLENTYSP 179 + ++ + R+G+R + ++E +G++ V+ H KS C D+ N Sbjct: 394 IGHAHTITQGP---FRSGSRPPLAQVLEDKQSGQQFTVIVNHFKSKGGC-PDNGPNANQN 449 Query: 180 SCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTI 228 Q A L +W+ Q P V+ GDFN Y + + + + Sbjct: 450 DGQYCWNQQRLDSAAALIEWVKQ-NAFPAP-VLLGDFN---AYYKEDPVQYIANHGFSNV 504 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN------AYKFLIQESFSEILYNE 282 D + +D+ +DQ + + S +++ Sbjct: 505 SRADEYSYVFDSQAGA------------LDHVFIDQGLTDSVKNVQHIHYNSDEPTVFSY 552 Query: 283 DDIKSRG---KRLSDHCPISIDYDF 304 D + R SDH P+ ID +F Sbjct: 553 QDTEYFKVGPYRSSDHDPVFIDVEF 577 >gi|319939609|ref|ZP_08013968.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] gi|319811198|gb|EFW07504.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] Length = 736 Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 99/333 (29%), Gaps = 67/333 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S ++ + + N DI+ L E+ Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPDAK------VEKIAKSFINEIHSPDIITLIEVQD 410 Query: 77 ----------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 AK+ + + + ++I A Sbjct: 411 NNGSVNDGTVSGVQSGEKLAAKIKQLGGKEYK-YVEVAPVDGADGGKPGSNIRVAFLYNP 469 Query: 117 -------RKKNVRVLQQSYPLLGAKDSFSR--------AGNRRAVELLVEINGKKIWVLD 161 R+ ++ + +R R+++ E G++I V+ Sbjct: 470 QRVKIVEREAGSSTEAAAFKDGHLVKNPARIDPTNPVFEKVRKSLAAEFEFKGERIVVIA 529 Query: 162 IHLKSFCFLDSLENTYSPSCS-LLSQ---QAQWLKDWITQ--KKESLVPFVIAGDFN--- 212 HLKS D++ + P+ L+Q Q + L ++ + K+ + FV+ GDFN Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQGKLLNAFVKEGLKQNPNLKFVLTGDFNDFE 589 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + ++ + +D+ R+ +D + +N + Sbjct: 590 FSETAKAVAGNELVNMMLNHDAADRYSYFYRGS---------NQSLDNIFVSKNIADKTV 640 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ DF Sbjct: 641 FSPVHI----NASFMEEHGRASDHDPVIAQLDF 669 >gi|229495737|ref|ZP_04389465.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis ATCC 35406] gi|229317311|gb|EEN83216.1| endonuclease/exonuclease/phosphatase [Porphyromonas endodontalis ATCC 35406] Length = 319 Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 50/306 (16%) Query: 20 VAQKVRLVSWNINTLS--EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 + + + + +WNI + +S +S +R + + + D++ +QE+ S Sbjct: 31 LDRNLLIATWNIRGFGDLTRSWMSKEGDSPRRDLHSVHCIAEILRRF--DVIAIQEVKSN 88 Query: 77 YNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132 A+ K+ + W + + +N + + R+ N+ L + Sbjct: 89 IRALRDTLKILG-DEWSMILTD---VNQGSAGNGERMAYLFDTRRVNLSGLAGELVVPDE 144 Query: 133 -----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 +K+ R + + ++ +H+ S L Sbjct: 145 WRSGVSKNVMQEQFVRSPYAVSFRSKHQTFILVTLHVLYG-------KKSSDRIKELKGI 197 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 AQWL W +I GDFN D +T + P+ S+ + Sbjct: 198 AQWLSSWAKDINAYHQNLIILGDFN----IEARGDLLAETFLSEG--LYIPEGLQSKEVS 251 Query: 248 NKNLRNKIPIDYF---------------VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + D + +Y F + + + L Sbjct: 252 RSIFNDTKFYDQIAWFNGSNGQPKLSLEFVRGGSYDF-VATALKNRGLTKQ---KLSFML 307 Query: 293 SDHCPI 298 SDH P+ Sbjct: 308 SDHYPL 313 >gi|229177202|ref|ZP_04304590.1| Sphingomyelinase C [Bacillus cereus 172560W] gi|228606262|gb|EEK63695.1| Sphingomyelinase C [Bacillus cereus 172560W] Length = 333 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 119/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D++ L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVIILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 YN+ SDH P+ Sbjct: 316 TYNDY---------SDHYPVEATISM 332 >gi|75759565|ref|ZP_00739653.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492943|gb|EAO56071.1| Sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 329 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 25 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 78 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 79 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKKLGNYSSSTPEDGGVAIVSKWPIAEKI 138 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ Sbjct: 139 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVR 191 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 192 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYTSMFKTLNASVPSYTGH 251 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 252 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 311 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 312 TYNDYSDHYPVEATISM 328 >gi|229188882|ref|ZP_04315915.1| Sphingomyelinase C [Bacillus cereus ATCC 10876] gi|228594587|gb|EEK52373.1| Sphingomyelinase C [Bacillus cereus ATCC 10876] Length = 333 Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 120/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPQSPQWTVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 +YN+ SDH P+ Sbjct: 316 MYNDY---------SDHYPVEATISM 332 >gi|308095136|ref|ZP_07663177.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|308089221|gb|EFO38916.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] Length = 434 Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + R Y L+ Y K D++ QE+ G Sbjct: 168 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPDYVKGY--DVLAFQEVFASGRDA 216 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + +++ I R V Q +P D Sbjct: 217 FLRELAKEYPYQTKMLDK---------DGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTD 267 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E QQ + + + Sbjct: 268 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSL 319 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + ++ S + N Sbjct: 320 N--IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEP--QYSGYTASTFDPRINNFAG 375 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 376 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVS 429 >gi|254506370|ref|ZP_05118513.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] gi|219550850|gb|EED27832.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] Length = 442 Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 99/294 (33%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + R Y L+ Y K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPDYVKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKD 135 + ++ + + + +IH V R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNIHDGGVVIVSRYPIVNQAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E +Q + + + Sbjct: 276 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRAMAKSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + R+ S + N Sbjct: 328 N--IPNGETVVYSGDFNVNKLKFPGDYQQMIANLSAIEP--RYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAESLWKHYNLSDHFPVS 437 >gi|54302910|ref|YP_132903.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9] gi|46916334|emb|CAG23103.1| hypothetical protein PBPRB1231 [Photobacterium profundum SS9] Length = 357 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 104/347 (29%), Gaps = 71/347 (20%) Query: 20 VAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEM 74 ++ +++ ++N+ N L + + + T + + +Y D++ QE+ Sbjct: 18 LSDTIKIATFNLFNYL--EPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGFQEV 75 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL---- 130 S ++ + + + F + AIA R + P Sbjct: 76 FSPESLKILVAAHGYGYFEVVDEA-EVIDDFICRSPVVAIASRYPITHIEAV-VPDKELA 133 Query: 131 --LGAKD--SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS---- 182 +G KD +FSR R +EL + + +H KS + EN + Sbjct: 134 VSMGLKDDFTFSRQPLRATIEL---PHIGECDCYVVHFKSKRPMIEHENNDNDESRTQTI 190 Query: 183 --LLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKIN------- 216 L A+ W I +++++ +P ++ GDFN ++ Sbjct: 191 IQTLK--AEVTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHL 248 Query: 217 --------YLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMD 263 +D + L + + K +DY ++ Sbjct: 249 LTGSLRFISESESDVILAKYRLKDTWDLYQATDNCAEMAHRTPTHYYGMKKSVLDYILLS 308 Query: 264 QNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 F ++ D R + +DH + I Sbjct: 309 CEFDAQYHSSLFEVSEHDTYDRHLINPSFERDSQSTDHGIVCITLAL 355 >gi|315606039|ref|ZP_07881070.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312321|gb|EFU60407.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 275 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 80/264 (30%), Gaps = 43/264 (16%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D++ +QE+ + +++ W + R+ + +AVR+ R+ Sbjct: 29 DTDVLLVQEVRAPEEISREIMGEEWDSVWVPCRIKGRAG--------VGVAVRRGRARID 80 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +L +S +G + E G + V+ + S ++ + L Sbjct: 81 GEPRLVLDDAESDVDSGRWLEATVSREGGGVPVRVVSAYFHSGEKDTPKQDAKM---AHL 137 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------------------W 225 + + + I ++ V ++ GDFN + + W Sbjct: 138 PRIGNRMAELIAEEANGGVSSLVCGDFNVVRSRCDIKNWTPNHNKRAGVLDEEIAFLNRW 197 Query: 226 KTIDPNDSLIRFPKEKDSR----CNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEIL 279 D++ + + N IDY Sbjct: 198 VDEGWRDTVRDLAGDTQGPYSWWSWRGQAFVNNAGWRIDYQYATPRLGALARS------- 250 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 ++ R SDH P+S+ YD Sbjct: 251 FDIGRAPDYDARFSDHAPVSVTYD 274 >gi|315221940|ref|ZP_07863851.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] gi|315188906|gb|EFU22610.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] Length = 736 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 100/333 (30%), Gaps = 67/333 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS 76 K+ + S+NI S ++ + + N DI+ L E+ Sbjct: 357 PSEDKLTIASYNIENFSANNATGETPDAK------VEKIAKSFINEIHSPDIITLIEVQD 410 Query: 77 ----------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 AK+ + + + ++I A Sbjct: 411 NNGSVNDGTVSGVESGEKLAAKIKQLGGKEYK-YVEVAPVDGADGGKPGSNIRVAFLYNP 469 Query: 117 -------RKKNVRVLQQSYPLLGAKDSFSR--------AGNRRAVELLVEINGKKIWVLD 161 R+ ++ + +R R+++ E G++I V+ Sbjct: 470 QRVKLVEREAGSSTETAAFKDGHLVKNPARIDPANPVFEKVRKSLAAEFEFKGERIVVIA 529 Query: 162 IHLKSFCFLDSLENTYSPSCS-LLSQ---QAQWLKDWITQ--KKESLVPFVIAGDFN--- 212 HLKS D++ + P+ L+Q QA+ L ++ + K+ + FV+ GDFN Sbjct: 530 NHLKSKLGDDAVYGSKQPAVQNTLAQRIEQAKLLNAFVKEGLKQNPNLKFVLTGDFNDFE 589 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + ++ + +D+ R+ +D + +N + Sbjct: 590 FSETAKAVAGNELVNMMLNHDAADRYSYFYRGS---------NQSLDNIFVSKNIADKTV 640 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ DF Sbjct: 641 FSPVHI----NASFMEEHGRASDHDPVIAQLDF 669 >gi|332709465|ref|ZP_08429426.1| putative extracellular nuclease [Lyngbya majuscula 3L] gi|332351724|gb|EGJ31303.1| putative extracellular nuclease [Lyngbya majuscula 3L] Length = 713 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 44/313 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLD-ADIVFL 71 + S A ++ + S+N+ L + + + Q NL DI+ L Sbjct: 254 ITNLVSSANQLTIASFNVENLDPNSQDGDDDIGDGK----FNAIAFQLINNLQSPDIIAL 309 Query: 72 QEMGS----------------YNAVAKVF--PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 QE+ + + + F+ + +I Sbjct: 310 QEVQDNNGTIDNGNVDARETYETLINAIVAAGGPQYS-FFDIPPVDRQDGGQPGGNIRVG 368 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL--KSFCFLD 171 + N + + R+++ E NG+ I V++ H K Sbjct: 369 Y-LYNPNRVTINTDSAQRIGVGETAFDNTRKSLLTEFEFNGETISVINNHFSSKGGSDPL 427 Query: 172 SLENT--YSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKT 227 EN + +QQAQ + D++ + ++ GDFN ++ + Sbjct: 428 FGENQPPQNGQEQKRNQQAQIVNDFVDTILTNDPDANVLVLGDFN-TFDFEEPLETL--K 484 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYN-EDDI 285 N L + N +D+ ++ + L+ Y+ Sbjct: 485 GYHNSVLTNLTETLPEDERYTFIFEGNSQALDHILVSDH----LVDAGAE---YDIVHVN 537 Query: 286 KSRGKRLSDHCPI 298 + SDH PI Sbjct: 538 SEFADQASDHDPI 550 >gi|119486376|ref|ZP_01620435.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] gi|119456589|gb|EAW37719.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] Length = 282 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 106/316 (33%), Gaps = 67/316 (21%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L + + P + A+ + ++S+N+ L D + + Sbjct: 15 ILLVMFVAIAPTFPASAEPLSIISYNVE------SDDLDDTDPHLVAEDIREI------V 62 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 AD+ L E+ A IF + + T ++ K + Sbjct: 63 GADLWGLSEVADQAAA---------DIFTEAVAVPGSDFKSIFG---TTGSLDKLQIIYN 110 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK------SFCFLDSLENTYS 178 Q LL ++ + G+R L H K F F + N S Sbjct: 111 QNRLDLLDHEELDNIGGSRSP--------------LVAHFKFLSTGQEFLFTVNHFNRGS 156 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY----------LGNNDDFWKTI 228 S +QQA+ L+DW + +P + GD+N + L D I Sbjct: 157 ESKR--NQQAENLRDWAAAQS---LPVIAVGDYNFDFDLDKKKGNKAFDLFVRKDVMTWI 211 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI-KS 287 PN ++C+ + +DY + Q A K+ + +IL+ ++ + + Sbjct: 212 KPNCLKTNSCPLTGTQCDP----KYASILDYVFVSQMAKKWPCES---DILFVQNQVCQK 264 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ ++ Sbjct: 265 EKEGFSDHYPLMANFS 280 >gi|99032047|pdb|2DDR|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032048|pdb|2DDR|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032049|pdb|2DDR|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032050|pdb|2DDR|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Calcium Ion gi|99032051|pdb|2DDS|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032052|pdb|2DDS|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032053|pdb|2DDS|C Chain C, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032054|pdb|2DDS|D Chain D, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Cobalt Ion gi|99032055|pdb|2DDT|A Chain A, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Magnesium Ion gi|99032056|pdb|2DDT|B Chain B, Crystal Structure Of Sphingomyelinase From Bacillus Cereus With Magnesium Ion Length = 306 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 3 STTQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 56 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 57 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 116 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 117 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 169 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 170 NQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHT 229 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 230 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 289 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 290 YNDYSDHYPVEATISM 305 >gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] Length = 719 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 101/327 (30%), Gaps = 54/327 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 K+ + S+NI S + D + DI+ L E+ Sbjct: 321 PAEDKLTIASYNIENFSANSKGR---DETPEEKVDKIAKSFINEVHSPDIITLIEVQDNN 377 Query: 77 --------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ F + + + +I A Sbjct: 378 GGVNDGTVEGVKSGEKLADRIKSFGGPEYK-YTEVAPIDGKDGGKPGANIRVAYLYNPNR 436 Query: 121 VRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 V ++ + P + + R+++ + G++I V+ H Sbjct: 437 VTLIGKDKGGSEEAARFVDGHLEKNPARIDPTNINFEKVRKSLAAEFDFKGERIVVIANH 496 Query: 164 LKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217 LKS D++ + P+ +QA+ L ++ + ++ + FV+ GDFN Sbjct: 497 LKSKLGDDAVYGSNQPAIENTKAQRVEQAKLLNAFVREGLRQNPNLKFVLTGDFN----D 552 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 +D KTI N+ + + + + + +D ++ +N ++ Sbjct: 553 FEFSDTV-KTIVGNELVNLMAEHEAGDRYSYFYRGSNQSLDNILVSKNIKDRVLFSPVHI 611 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 612 ----NASFMEEHGRASDHDPVVVQIDF 634 >gi|28897872|ref|NP_797477.1| putative phospholipase C [Vibrio parahaemolyticus RIMD 2210633] gi|260361802|ref|ZP_05774827.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] gi|260877031|ref|ZP_05889386.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|28806085|dbj|BAC59361.1| putative phospholipase C precursor [Vibrio parahaemolyticus RIMD 2210633] gi|308093920|gb|EFO43615.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|308113224|gb|EFO50764.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] Length = 442 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + R Y L+ Y K D++ QE+ G Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPDYVKGY--DVLAFQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + +++ I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E QQ + + + Sbjct: 276 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + ++ S + N Sbjct: 328 N--IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEP--QYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVS 437 >gi|223939432|ref|ZP_03631310.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223891924|gb|EEF58407.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 330 Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 117/328 (35%), Gaps = 53/328 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQY 60 +R V+ + + A R+ +N+ L E+ G +T + +R+ Sbjct: 26 LRCIVIISAWLFLHSPLFAADTFRVACYNVENYLDEKTGTR-----PLKTDAAKAKIRES 80 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L D++ L+EMGS NA+ ++ S + + + + D + +AV K Sbjct: 81 ICALKPDVIALEEMGSTNALLELQGS-----LKSEGLDLPYWEHVAGFDTNIHVAVLSKF 135 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAV-----ELLVEINGK-KIWVLDIHLKSFCFLDSLE 174 + D+F G R V E+ ++ ++ HLKS + + + Sbjct: 136 PFTAHHPH----TNDAFLLNGRRFQVSRGFAEVDIQPTTNYSFTLIAAHLKSRRQIAAAD 191 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + ++A+ L++ I + + + ++ GDFN ++ Sbjct: 192 ESELR-----LEEAKVLREIIDARLAANPNLNLIVLGDFN-DLHDSAPIKTILGGRSKKG 245 Query: 233 SLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQN-AYKFLIQESF 275 + P E++ +++ + R +DY ++ A ++ ES+ Sbjct: 246 LIDTRPAERNGDDHSHTDRRVASRNITWTHFYAKEDTYSRVDYILLSHGIAREWNTNESY 305 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + N SDH P+ + Sbjct: 306 VLSIPN-------WGTGSDHRPLVASFT 326 >gi|228963775|ref|ZP_04124916.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str. T04001] gi|228795920|gb|EEM43387.1| Sphingomyelinase C [Bacillus thuringiensis serovar sotto str. T04001] Length = 333 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 113/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINTENKNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPPYIENKVLQPKSPQWTVTSWFQKY 315 Query: 292 ----LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|256851997|ref|ZP_05557384.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260661433|ref|ZP_05862346.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN] gi|282931878|ref|ZP_06337357.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 208-1] gi|297205131|ref|ZP_06922527.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii JV-V16] gi|256615409|gb|EEU20599.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260547888|gb|EEX23865.1| metal-dependent hydrolase [Lactobacillus jensenii 115-3-CHN] gi|281303989|gb|EFA96112.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 208-1] gi|297149709|gb|EFH30006.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii JV-V16] Length = 369 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 82/275 (29%), Gaps = 51/275 (18%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K + D F QE+ + + + F N + ST + S + + + A+ + + Sbjct: 114 IKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAESTFNNMGSSFAQNFHSAYIALPLNNPH 171 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----------------NGKKIWVLDIHL 164 L + S L+E NGK++ +++ H+ Sbjct: 172 GFARSGILALSKYHITSSERRQYFVSSNLIEKFVDLDRCFNVMRLPVKNGKELVLINSHM 231 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--------- 215 + + + +Q L + + + + GDFN Sbjct: 232 SA--YDKGGLSK--------KKQLALLNQVMKAEIKKGNYVICGGDFNHAFGAKYVAHFK 281 Query: 216 NYLGNNDDFWKTIDPN---DSLIRFPKEKD---SRCNANKNLRNKIPIDYFVMDQNAYKF 269 + +D + + + C + K ++D F Sbjct: 282 SQQKQHDWLAVLSQKDLASSGMKMVTAKNADEVPTCRGSDIPYKKGVTYTTIVDG----F 337 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L+ + + YN D + SDH P+ + + Sbjct: 338 LVSPNVKAVSYNIDTQFAY----SDHNPVKLSFSL 368 >gi|229149012|ref|ZP_04277257.1| Sphingomyelinase C [Bacillus cereus m1550] gi|228634552|gb|EEK91136.1| Sphingomyelinase C [Bacillus cereus m1550] Length = 333 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 112/316 (35%), Gaps = 41/316 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERVDLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FP 238 Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 197 NQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGHT 256 Query: 239 KEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR--- 291 D+ N+ +DY + ++ E+ + + + Sbjct: 257 ATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYT 316 Query: 292 ---LSDHCPISIDYDF 304 SDH P+ Sbjct: 317 YNDYSDHYPVEATISM 332 >gi|225159097|ref|ZP_03725404.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224802303|gb|EEG20568.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 262 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 108/298 (36%), Gaps = 59/298 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRT-TSDYTLLRQYAKNLDADIVFLQEMGS--- 76 +Q +R+V++NI + + S KR + + NL DIV LQE+ Sbjct: 2 SQPLRIVTYNIAH--GRGLAPIQGFSSKRQVRRNLLKISCLLANLKPDIVALQEIDENSR 59 Query: 77 -------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + + + +F H++R+ +++ A+ ++ + + Sbjct: 60 WAGNFDHLELLRRA-GRFKYAVF------GVHNRREGLFNLNYGNAILSRHPILEWE--- 109 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 S+ G + + + ++I G+++ V+++HL + Q Sbjct: 110 --TTAFGSSKVGEKGFLFVEIDIGGRRVPVVNLHL------HYRSRRHRLD------QVD 155 Query: 190 WLKDWITQKKES-----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + D++ ++++ +P V+ GDFN + ++ P + Sbjct: 156 KVFDYLEARQKTTGPGWAMPPVVCGDFNAADSPQDATASLLSQLNHFGGYALHPLDGK-- 213 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 P + + F++ ++ + ++S LSDH P+ ++ Sbjct: 214 ------RTFPSP-----LPSRSLDFVLVPEKQQVT-KSEVVRSY---LSDHRPVMVEM 256 >gi|88799872|ref|ZP_01115445.1| hypothetical protein MED297_03080 [Reinekea sp. MED297] gi|88777452|gb|EAR08654.1| hypothetical protein MED297_03080 [Reinekea sp. MED297] Length = 551 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 110/335 (32%), Gaps = 83/335 (24%) Query: 21 AQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEM 74 A+ +RL N+N L G Y L Q LDAD++ L E+ Sbjct: 248 ARALRLAGSNVNNLFNGNGRGSGFRDGRGPENQRQYARKLNRLSQAFVRLDADVIALNEV 307 Query: 75 GS------------YNAVAKVFPKNTWC-IFYSTERLI-NHSKRDSNNDIHTAIAVRKKN 120 + ++ + + + + +S + + + + T + V + Sbjct: 308 ENDGFGQNSTLIDLIESLNHLTGDDRYQAVTFSDRQTGTDAIQNAMLFNARTVVKVGQPR 367 Query: 121 VRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK---SFCFLD 171 + P + + R+G R +V + HLK S C D Sbjct: 368 SITELPEWENRWHRPFMLQEFEAIRSGQRFSVVVA-------------HLKSKGSRCPED 414 Query: 172 SLENTYSP-SC--SLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKINYLGN 220 + ++ +C L+ L W++ ++ F+I GDFN RK+ G Sbjct: 415 TDQSVQQEGACMVKRLNA-VDRLLGWLSIPEDQP-AFLI-GDFNAYANERPIRKLARAG- 470 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF----- 275 WKT+ + + + +DY + + A + ++Q + Sbjct: 471 ----WKTLVGTANAYSYVYDGQPG-----------VLDYVIGNAMAERLVLQSGYWPINS 515 Query: 276 ------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +++ + SDH P+ ID F Sbjct: 516 GQVAGATQVPFLSRLRLPEFYGFSDHDPVFIDVSF 550 >gi|227822472|ref|YP_002826444.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] gi|227341473|gb|ACP25691.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] Length = 368 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 115/368 (31%), Gaps = 89/368 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLL--RQYAKNLD----- 65 +RL ++NI L + S ++N +K R+ ++Y L + + D Sbjct: 2 SLRLATFNIENLLSRFDFSGFRNQLKQDRVLRLFDVRSEAEYQRLEEARTIAHTDDTRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVA--------KVFPKNT---WCIFYSTERLINHS--- 102 ADI+ LQE + A+ ++ + I + R I+ + Sbjct: 62 SALAIADCDADILCLQEADNMAALQAFEYGYLFRMVGNGYRQKYLIEGNDSRGIDVAVLM 121 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKI 157 + ++ + K + + + L + + + R +E+ + I G+ + Sbjct: 122 REETRDGQRIECLEVKSHATLTYEDLDLFNEELALTNRPRDRIFKRDCLEVDLRIGGRPL 181 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP----FVIAGDFN- 212 + +H KS + + +L + +A+ ++ I + F I GD N Sbjct: 182 TLYVVHFKSMGPARDGLDGRRATMALRAAEAKAVRHVIESRFGRGHTADKMFAICGDMND 241 Query: 213 ----------RKINY-------------LGNNDDF-------------WKTIDPNDSLIR 236 R+ Y + ++D F W R Sbjct: 242 YQEKVVILGDRRNGYEFVPHEEEVSALDILSHDGFVENPMSRRPVLDRWTLFHSRGPEER 301 Query: 237 FPKEKD-SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D + RN + V Y+ + Y SDH Sbjct: 302 HLCQLDYIWLSPALARRNSSRVPEIVRAGQPYRTIFPAGQEVERYPRTGWDRPKA--SDH 359 Query: 296 CPISIDYD 303 CP+ + D Sbjct: 360 CPLVMTLD 367 >gi|229089031|ref|ZP_04220388.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228694283|gb|EEL47902.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 353 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 110/321 (34%), Gaps = 56/321 (17%) Query: 20 VAQKVRLVSWNINT--LSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFL 71 V ++ + ++NI L + + L + R T + + + + D+D + + Sbjct: 52 VGEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNIGNMVSFLQKEDSDFILV 111 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------- 122 QEM + + F N + F + + + N + ++K + Sbjct: 112 QEMDEKSL--RSFDVNEYKAFQDGLKGFASTFGYNFNAQWVPVPIKKPHGYTKSGLGSFS 169 Query: 123 ------VLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175 V + P +R VE + NGK + ++++HL + Sbjct: 170 KYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKIPVDNGKYLRMVNVHLSA--------Y 221 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG-DFNRKINYLGNNDDFWKTIDPNDSL 234 S QQ ++LK+++ + ++ +++ G D+N+ ++ + D +K P + Sbjct: 222 DKGGSIR--KQQVEFLKEYMNKHYKNG-DYIVLGGDWNQLLSDVQLQDPKFKEEWPEWLV 278 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYF-----------VMDQNAYKFLIQESFSEILYNED 283 D + D ++D FL+ + + Sbjct: 279 QLPEDFTDGGFQWAVDDSVWTVRDNVKSYVEGENFVTIIDG----FLVSPNVEIVSVQGH 334 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 D+K SDH P+S Sbjct: 335 DLKFEN---SDHNPVSTVLKL 352 >gi|227536411|ref|ZP_03966460.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243787|gb|EEI93802.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 371 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 101/316 (31%), Gaps = 91/316 (28%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-LRQYAKNLDADIVFLQEMGS 76 + +R++S+N V L+K + K D+ + ++ D++ QE S Sbjct: 104 TAADSSIRVLSFN---------VHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYS 154 Query: 77 --------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRK--KNVRV 123 + + F W ++ + + IH+ V+ R+ Sbjct: 155 KIKGKHVYAKELRENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGINRI 214 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------------FLD 171 + +E K + + ++HL+SF + Sbjct: 215 IYAD----------------------IEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGE 252 Query: 172 SLENTYSPSCSLLSQ-------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + L Q QA+ LK+ I + + +P+++ GDFN + Sbjct: 253 SNKTATRRVGRKLKQAFASRSEQAEALKEHI---ETAKIPYMVMGDFN--------DTPM 301 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNE 282 +++ ++ +K + IDY F+ + Y Sbjct: 302 SYSVNLIGKGMQNAFQKKGSGWGVTHYEMLPIFQIDYIFTS---------NDFNILNY-- 350 Query: 283 DDIKSRGKRLSDHCPI 298 + ++LSDH PI Sbjct: 351 ---QIVKRKLSDHYPI 363 >gi|254229945|ref|ZP_04923347.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262394659|ref|YP_003286513.1| putative phospholipase C [Vibrio sp. Ex25] gi|151937514|gb|EDN56370.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262338253|gb|ACY52048.1| putative phospholipase C [Vibrio sp. Ex25] Length = 442 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 100/291 (34%), Gaps = 42/291 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L+ ++ + R Y L+ QY K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWALT-----AIASHIGDR----YELIPQYVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + +N +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKEGVN------IHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ V H SF + E +Q + L + Sbjct: 279 DKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAKSLNIP 330 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 V + GDFN + G+ + + ++ +S + N Sbjct: 331 SSETVVYS--GDFNVNKRKFPGDYQQMIANLSAIEP--QYSGYTESTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTSESLWKHYNLSDHFPVS 437 >gi|300771464|ref|ZP_07081339.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761453|gb|EFK58274.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 371 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 103/316 (32%), Gaps = 91/316 (28%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-LRQYAKNLDADIVFLQEMGS 76 + +R++S+N V L+K + K D+ + ++ D++ QE S Sbjct: 104 TAADSSIRVLSFN---------VHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYS 154 Query: 77 --------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRK--KNVRV 123 + + F W ++ + + IH+ V+ R+ Sbjct: 155 KIKGKHVYAKELRENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGINRI 214 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------------FLD 171 + +E K + + ++HL+SF + Sbjct: 215 IYAD----------------------IEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGE 252 Query: 172 SLENTYSPSCSLLSQ-------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 S + L Q QA+ LK+ I + + +P+++ GDFN + Sbjct: 253 SNKTATRRVGRKLKQAFASRSEQAEALKEHI---ETAKIPYMVMGDFN--------DTPM 301 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNE 282 +++ ++ +K + IDY ++ F+ + Y Sbjct: 302 SYSVNLIGKGMQNAFQKKGSGWGVTHYEMLPIFQIDYIFTSKD---------FNILNY-- 350 Query: 283 DDIKSRGKRLSDHCPI 298 + ++LSDH PI Sbjct: 351 ---QIVKRKLSDHYPI 363 >gi|170725165|ref|YP_001759191.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] gi|169810512|gb|ACA85096.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] Length = 355 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 99/347 (28%), Gaps = 72/347 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYN 78 + +++ ++N+ E ++ L Y D++ QE+ S + Sbjct: 13 ELIKVATFNLFNFIEPPSAYYDFENIYTQEQWQKKLAWITSYLNEHQPDVIGFQEVFSPD 72 Query: 79 AVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----- 130 A+A + + + + + + + AIA R + V Sbjct: 73 ALATLTQACGLDYFAVLDEPDVFDD----FIYSKPVVAIASRYPIIDVHSVEADSQLAEM 128 Query: 131 --LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCSLLSQ 186 + A SFSR R V + +H KS F E S L Sbjct: 129 VGMPANFSFSRKPLRATVSI---PKLGPCDCYVVHFKSKRPLFDAQTEYLSGKSQVKLKT 185 Query: 187 -Q---AQWLKDW-----------------ITQKKESLVPFVIAGDFNRKIN--------- 216 Q + L W + ++ ++ P ++ GDFN + Sbjct: 186 GQLLAVEALAQWGASIVRGSEAALLRHAMVERRVQTQYPMMLMGDFNDGLEGGVLASLTS 245 Query: 217 --YLGNNDDFWK---------TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVM 262 D+ + + + L + + S +DY ++ Sbjct: 246 VDTRIKPDNVFGDVTEELQEYQLQDSYELYQKSQYSLSSQQRPATYYYLAAGSVLDYILL 305 Query: 263 D---QNAYKFLIQESFSEILYNEDDI---KSRGKRLSDHCPISIDYD 303 + + E Y+ I R + +DH P+ I Sbjct: 306 SCEFDAKHSRSLAEVGRYETYDRHLINPSFDRDSQSTDHAPVMITLS 352 >gi|110636350|ref|YP_676558.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110287334|gb|ABG65393.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 265 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 80/287 (27%), Gaps = 66/287 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++WNI G+ R D + + D D+V LQE+GS K Sbjct: 20 TMRVMTWNI-----HGGI----GPDGR--RDLQRVVDLVRKHDPDLVALQEVGSR---RK 65 Query: 83 VFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + ST + + TA + + + D R Sbjct: 66 VTDAAEAFTFLLST-----LGNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKR 120 Query: 142 -NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A+E + E + V+ HL L QAQ L D + Sbjct: 121 ERRAAIEAVAETPFGPLHVVAAHL-------GLSFRERR------HQAQLLADLVR---S 164 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+ GD N D W FP + +D Sbjct: 165 GSAPTVLMGDLN---------DWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVF--ALDRI 213 Query: 261 VMDQN---AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A ++ + + SDH P+ + Sbjct: 214 YCRPGGMLARQWTDPQ---------------ARTASDHLPVIAELRM 245 >gi|328473167|gb|EGF44015.1| putative phospholipase C [Vibrio parahaemolyticus 10329] Length = 442 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 101/294 (34%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + +R Y L+ Y K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGER----YELIPDYVKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYPLLGAKD 135 + ++ + + ++ +++ V R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDKK---------GFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E QQ + + + Sbjct: 276 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FQQMRTMAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 + V +GDFN + + G+ + + ++ S + N Sbjct: 328 N--IPNNETVVYSGDFNVNKLKFPGDYQQMIANLSAMEP--QYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVS 437 >gi|261253090|ref|ZP_05945663.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891] gi|260936481|gb|EEX92470.1| hypothetical protein VIA_003115 [Vibrio orientalis CIP 102891] Length = 316 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 111/335 (33%), Gaps = 71/335 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEM 74 + + + + N+ + + ++ S ++ + LDADI+ LQE+ Sbjct: 2 NTTKTLTFATANLFNF-LKPPDAFYEFSNIYGQEEWQAKCQWTKSQINKLDADIIGLQEV 60 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S AV ++ + + F + ++ + S + + V L YP+L A+ Sbjct: 61 FSIEAVQQLLAECGFPYFVTVDKPKSESDY-----------IYSRPVVALASKYPILHAE 109 Query: 135 DSFSRAGNRRAVELLVEI-NGKKIW------------VLDIHLKSFCFLDSLENTYSPSC 181 +A ++ + + K I V HLKS + Sbjct: 110 AVKPLKEPVKAYQIELPEFSRKPIHAVIKVPTVGEVAVYVCHLKS----------QRATE 159 Query: 182 SLLS-QQAQWLKDWI-----------------TQKKESLVPFVIAGDFNRKINYLGNN-- 221 L +++Q L W+ Q ++S P + GD N+ + Sbjct: 160 PTLKGEESQLLGQWLSSQLRGWESMMLRLYMDKQYQKSPRPTALLGDMNQPLTSDITGLL 219 Query: 222 ----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESF 275 D+ + + DS + + S A + +DY ++ Q + Sbjct: 220 TQRADEEGEALVLTDSWLVYKHAAISPARAATHYHFSKGNVLDYVILSQEFQPDSQRSIA 279 Query: 276 SEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 Y D I R K+ SDH +++ F Sbjct: 280 EVSRYLVQDQHLINPIYDRDKQASDHAFVAVGTQF 314 >gi|134093694|ref|YP_001098769.1| hypothetical protein HEAR0422 [Herminiimonas arsenicoxydans] gi|133737597|emb|CAL60640.1| putative DNase I-like [Herminiimonas arsenicoxydans] Length = 337 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 118/320 (36%), Gaps = 59/320 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSY 77 Q++R S+N+ L+ G+ + + + ++ +Y + + Q LDAD++ LQE+ S Sbjct: 3 QELRFASFNVCNLAL-PGMKYYDDQIPYSSEEYDVKINWIAQQLDRLDADVIGLQEIFSQ 61 Query: 78 NAVAKVFPK-----NTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSY 128 +A+ V K + I + + L +H S + + + L + Sbjct: 62 DALKDVLAKTQNYRDAQLIGFDPDPLTDHLTPSVALISRLPVSPGAVIYTELPNNLSVTL 121 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPS------C 181 P G SR R + +EI + V HLKS L N + Sbjct: 122 P--GVHHPVSRF-TRPILHATIEIAPDLLTHVFVCHLKS--KLPDYRNDNNDDHPDQAGI 176 Query: 182 SLLSQQAQWLKDWITQK-------KESLVPFVIAGDFNR--------------KINYLGN 220 ++L + D + + K+ +P ++ GDFN K G Sbjct: 177 AMLRSLIRRGTDALGLRTLLSNVNKKKRLPIIVMGDFNDVASAIPTQMVMGLGKYPLDGI 236 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQ--NAYKFLIQESF 275 +D +++ R +D+ + + ID+ ++ + N Sbjct: 237 DDRLFES-------YRIQSRRDALRDVGYTHVHDGIYETIDHILVSEEFNPASRAAIGEV 289 Query: 276 SEILYNEDDIKSRGKRLSDH 295 +E++Y D + + + SDH Sbjct: 290 AEVMYLNDHMTFKQPQASDH 309 >gi|156933850|ref|YP_001437766.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] gi|156532104|gb|ABU76930.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 87/269 (32%), Gaps = 41/269 (15%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVA-------KVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + +L+AD++ + E S A+A + + + R + + Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMV---IDGNDTRGIDVGL 175 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 T + +++ A+ + + + ++ +WV+ HLKS + Sbjct: 176 LTG---ANYPIGLMRSHVDDRDARGQLIFSRDCPEYSVPLKSGD-TLWVMVNHLKSKGYG 231 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTID 229 E+ QAQ + + ++++ F+ IAGDFN +D + Sbjct: 232 GKAESDARR-----KAQAQRVAEIYKARRDAGEQFIAIAGDFNDT----PESDALAPLLK 282 Query: 230 PNDSLIRFPK-----EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF--------- 275 D F N NK +DY ++ ++ + Sbjct: 283 ETDLRDAFTHPAFDNGGYPGTWGNSAKNNK--LDYILLSPALWERVTAGGVIRKGMWPGE 340 Query: 276 -SEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++K + SDH + +D + Sbjct: 341 RPVKWEVYPELKKPQQAGSDHAALWVDLN 369 >gi|153009683|ref|YP_001370898.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] gi|151561571|gb|ABS15069.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] Length = 260 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 92/313 (29%), Gaps = 87/313 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + K DI LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IENLQHWLKESSPDIACLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-----LGAKDSFS 138 + + I V +L + P L D Sbjct: 39 --DDQF-----PRLEIEALGYHVETHGQKGF----NGVALLSKKSPDEVNRGLPGDDGDE 87 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +A V + + V+ ++L + +D+ + Y S Q L+ W + Sbjct: 88 QARFIEGVYST---DKGVVRVVSLYLPNGNPVDTEKFPYKLS----WMQR--LELWAKDR 138 Query: 199 KESLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDP 230 P V+AGD+N R++ LG D + D Sbjct: 139 LALEEPLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAFRRLENLGFTDAIRASTDD 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + + + N I ID+ ++ A I + + + Sbjct: 199 SGIYSFWDYQAGAW-----QKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RAWE 246 Query: 291 RLSDHCPISIDYD 303 + SDH P++I Sbjct: 247 KPSDHVPVTITLS 259 >gi|163938601|ref|YP_001643485.1| sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4] gi|163860798|gb|ABY41857.1| Sphingomyelin phosphodiesterase [Bacillus weihenstephanensis KBAB4] Length = 333 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 110/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 MSTNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDD-----FWKTIDPNDSLIR-F 237 ++Q Q ++++I K +V I GD N NN + +KT+ + Sbjct: 196 TKQLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVM--DQNAYKFLIQESFSEILYN---EDDIKSR 288 D+ N+ +DY + D F+ K Sbjct: 256 TATWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKY 315 Query: 289 GK-RLSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYDDYSDHYPVEATISM 332 >gi|237815303|ref|ZP_04594301.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|237790140|gb|EEP64350.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] Length = 284 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + R L+ + + DIV Sbjct: 12 CLPCPARAHNHYGMKIATWNIN------------SVKAR----IDNLQHWLRESSPDIVC 55 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 56 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 105 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 106 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 154 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 155 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 213 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 214 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 266 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 267 -----RAWEKPSDHVPVTVTL 282 >gi|34499249|ref|NP_903464.1| hypothetical protein CV_3794 [Chromobacterium violaceum ATCC 12472] gi|34105100|gb|AAQ61456.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 637 Score = 60.9 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 112/334 (33%), Gaps = 68/334 (20%) Query: 21 AQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEM 74 A +R+ S+N +N + G +T D+ + + LDAD++ L E+ Sbjct: 296 AGHLRVASFNVLNFFNGDGLGGGFPTERGAKTRDDFLRQKAKIVSAIRQLDADVLGLMEL 355 Query: 75 GS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSN--------NDIHTAIAVRKKNV 121 + +AV ++ + + + R + + I T + R Sbjct: 356 ENDGFGPQSAVKELVDA------LNAGQAADKQYRFVDPGLPKIGTDAITTGMLYR---- 405 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK---SFC-------FLD 171 + A NR ++ +GKK+ ++ HLK S C D Sbjct: 406 PSRVKPDGAAQALTVGDPGKNRLSLAQTFAADGKKLTLVVNHLKSKGSSCDQVKVDGAPD 465 Query: 172 SLENTYSPSCSLLSQQAQW-LKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDF--WKT 227 + +C+L QA L W Q+ + ++ GD N D ++ Sbjct: 466 ADTGDGQGNCNLTRVQAARDLVKWAKQRGASAKEGLLVMGDMN----AYAKEDPIRAFED 521 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ L RF K+ S ++ +D+ + D + K++ I +E Sbjct: 522 GGLSNLLARFQKDAYSYVYQGESGN----LDHALADASLVKWVADAGEWHINADEPTALE 577 Query: 288 RG-----------------KRLSDHCPISIDYDF 304 G R SDH P+ +D Sbjct: 578 YGSEFKSAEQRQNYYAPDAYRSSDHDPLYVDLQL 611 >gi|298293932|ref|YP_003695871.1| endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] gi|296930443|gb|ADH91252.1| Endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] Length = 269 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 87/288 (30%), Gaps = 68/288 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-AV 80 ++RL++WNI G+ +R D + D++ LQE+ + + Sbjct: 8 GRLRLMTWNI-----HGGI----GPDRR--FDLDRIASLVAKHAPDVLALQEIDTRGRDI 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFS- 138 + P I + T IAV + L +P Sbjct: 57 DCLAPLRGLDI-------------HHFTEART-IAVPDGHYGHALFSRWPTSDVVLHDLS 102 Query: 139 --RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R A+E + + ++ +HL F F +QA L Sbjct: 103 VWRYEPRIAIETQIATPFGPLHLVAVHLGLFIFER-------------RRQAGMLAA--M 147 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 ++ +P V+ GDFN D F P+ R + + Sbjct: 148 ARRVRGMPTVMMGDFN---------DWFSFGQVTRTMSHVLPERTRLRTFPAQKPALR-- 196 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D ++ ++F + +SDH PI +D Sbjct: 197 LDRVYCSAPG---MLADAF---------TDPAARAISDHLPIIVDLAL 232 >gi|159028952|emb|CAO87413.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1628 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 104/320 (32%), Gaps = 57/320 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDA-DIVFLQEMGS 76 A K+ + S+N+ L+ E ++R + +L Q NL A DI+ LQE+ Sbjct: 473 GTADKLTIASYNVENLNPTES---NPGGLER----FGVLANQIVNNLRAPDIIGLQEIQD 525 Query: 77 ---------------YNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y A+ T+ F + + + +I Sbjct: 526 NNGPINDGTVAADLTYQALIDAITAAGGPTYQ-FLNIDPVDGRDGGAPGTNIRVGYLYNP 584 Query: 119 KNVRVLQQSY----PLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKS-----FC 168 V ++ S + D+ +R+ + NG+++ V++ HL S Sbjct: 585 DRVSFVEGSLRRITDPIATPDNDGAFTNSRKPLVATFTFNGQEVTVINNHLTSRRGGNGL 644 Query: 169 FLD-SLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW 225 F + N + QA + + + V+ GD N G + + + Sbjct: 645 FGNVQPPNIGGADVR--ANQATVINSEVNAILADDPNANVVVLGDLN------GFDFEEF 696 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + I L + D R A N + N +D+ ++ N + + Sbjct: 697 QQILSGGVLTNLSQTLDVRDRATFNFQGNSQALDHILITNNLASKAEYDIVRVNV----- 751 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + +DH PI + Sbjct: 752 --DFLDQPADHEPILATLNL 769 >gi|301167117|emb|CBW26696.1| hypothetical protein BMS_1876 [Bacteriovorax marinus SJ] Length = 254 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 83/263 (31%), Gaps = 38/263 (14%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L++ +D+ QE+ N T + + + + Sbjct: 12 LKKILSKNISDLNGFQEIVDTGFFKNFIHSNFKDHDVITSKCGGYG------NQKLSFVY 65 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 KK + ++ L + +G R +++ ++ + K WV +HLK+ ++ Sbjct: 66 NKKKFQHIRTEEDLAITGKNSCNSGVRPLLKINLKDFTSKKIFWVYLVHLKAGSNSKDIQ 125 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + Q ++L + +VI GDFN + + F K I Sbjct: 126 FRDT--------QLKYL----KSQLSPKNAYVIMGDFNTTQYFHSEGNYFHKFIR---DA 170 Query: 235 IRFPKEKDSRC----NANKN--LRNKIPIDYFVMDQ---NAYKFLIQESFSEILYNE--- 282 + C N L +D+ ++ + + + + N Sbjct: 171 KLIASSSEIDCSSYWWGGINDGLYYPSLLDHILVTKELVGNFNRIDFTNTEHCAQNTCQI 230 Query: 283 ---DDIKSRGKRLSDHCPISIDY 302 ++ +SDHCPI + Sbjct: 231 ASLQELGQSYNSVSDHCPIRAEL 253 >gi|229002991|ref|ZP_04160856.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228758256|gb|EEM07438.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 354 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 116/315 (36%), Gaps = 56/315 (17%) Query: 20 VAQKVRLVSWNINT--LSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFL 71 V ++ + ++NI L + + L + R T + + + + + D+D + + Sbjct: 53 VGEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILV 112 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------- 122 QEM + + F N + F + + + N + ++K + Sbjct: 113 QEMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFS 170 Query: 123 ------VLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175 V + P +R VE V NGK + ++++HL + D N Sbjct: 171 KYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSA---YDKGGN 227 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 IR-------KQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQ 280 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFV--MDQNAYKFLIQESFSEIL------YNEDDIKS 287 D + +D V + N ++ E+F I+ N + + Sbjct: 281 LPEDFTDGG--------FQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPNVEIVSV 332 Query: 288 RGKRL----SDHCPI 298 +G L SDH P+ Sbjct: 333 QGHDLKFENSDHNPV 347 >gi|229009363|ref|ZP_04166629.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228751907|gb|EEM01668.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] Length = 354 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 116/315 (36%), Gaps = 56/315 (17%) Query: 20 VAQKVRLVSWNINT--LSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFL 71 V ++ + ++NI L + + L + R T + + + + + D+D + + Sbjct: 53 VGEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILV 112 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------- 122 QEM + + F N + F + + + N + ++K + Sbjct: 113 QEMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFS 170 Query: 123 ------VLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175 V + P +R VE V NGK + ++++HL + D N Sbjct: 171 KYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMVNVHLSA---YDKGGN 227 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 IR-------KQQVEFLKEYMNRHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQ 280 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFV--MDQNAYKFLIQESFSEIL------YNEDDIKS 287 D + +D V + N ++ E+F I+ N + + Sbjct: 281 LPEDFTDGG--------FQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPNVEIVSV 332 Query: 288 RGKRL----SDHCPI 298 +G L SDH P+ Sbjct: 333 QGHDLKFENSDHNPV 347 >gi|17987376|ref|NP_540010.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|17983063|gb|AAL52274.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M] Length = 296 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 103/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN R L+ + + DIV Sbjct: 24 CLPCPARAHNHYGMKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVC 67 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 68 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 118 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 166 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 167 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 225 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 226 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 278 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 279 -----RAWEKPSDHVPVTVTL 294 >gi|170050812|ref|XP_001861479.1| nocturnin [Culex quinquefasciatus] gi|167872281|gb|EDS35664.1| nocturnin [Culex quinquefasciatus] Length = 454 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 80/215 (37%), Gaps = 22/215 (10%) Query: 7 LALVFFLVPCTASVAQK--VRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQY 60 L L C+ +R+ WN+ TL V +++ Y L+++ Sbjct: 107 LKLDAISKNCSEPTTNPAQLRIFQWNMLSQTLGMHNDGFVRCPVDALTWDCRRYQLIQEI 166 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +N D DIV LQE+ + + K+ + +F+ D+N A+ +K Sbjct: 167 VQN-DPDIVCLQEVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKD 225 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTY 177 + +L +L S A+ + N +++ V HLK+ L L N Sbjct: 226 RLELLNHFTRVLEVWRVQSNQVAIAALFRTRDTN-QELCVTTTHLKARKGALLSKLRN-- 282 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L ++ P ++ GDFN Sbjct: 283 --------EQGKDLLGFVDA-VAEKRPVILCGDFN 308 >gi|229165616|ref|ZP_04293389.1| Sphingomyelinase C [Bacillus cereus AH621] gi|228617851|gb|EEK74903.1| Sphingomyelinase C [Bacillus cereus AH621] Length = 333 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 111/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ + + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKDDRFVHVIGTHLQA---EDSMCGKNSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFN-RKINYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V+ GD N +IN N+D +KT+ + Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNRINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVM--DQNAYKFLIQESFSEILYN---EDDIKSR 288 D+ N+ +DY + D F+ K Sbjct: 256 TATWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENNVLQVKSPKWSVTSWFKKY 315 Query: 289 GK-RLSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYDDYSDHYPVEATISM 332 >gi|319785687|ref|YP_004145162.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317464199|gb|ADV25931.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 575 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 43/321 (13%) Query: 15 PCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTL-LRQYAKN---LDADI 68 P V +++ ++N+ L + G RT + L + LD DI Sbjct: 267 PQPPRVPGTLKVAAFNLENLFNGDGRGGGFPTKRGARTHAAMQAQLAKLVATVHGLDPDI 326 Query: 69 VFLQEMGS-----YNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L E+ + +++A++ W + + I + R Sbjct: 327 AALMELENDGYGPESSIAQLVDALNADGAQWRFV-------DAGHGPGGDTIRVGLIYRA 379 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177 V + L G R+ A + + + + V+ HLKS C + + Sbjct: 380 DRVVARGEPAVLEGGP-FGERSRVPLAQAFVRKGGKRDLVVVANHLKSKGCSEATGADAD 438 Query: 178 SPS---C--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDP 230 C +L + A+ L W+ V+ GDFN Y + W + Sbjct: 439 RGDGQGCWNALRTDSARRLHAWLKTHPVGSRAGRVVMLGDFN---AYAMEDPLHWLRSEG 495 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 + + +D+ ++ + L + + +E D Sbjct: 496 GWVDAFAAAGIERP-WSYVYDGLSGRLDHALLSPSLVPALRGAAEWHVNADEPDDAGYAG 554 Query: 290 ------KRLSDHCPISIDYDF 304 R SDH P+ + +D Sbjct: 555 RNEPGPWRSSDHDPLLLGFDL 575 >gi|260566570|ref|ZP_05837040.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261758076|ref|ZP_06001785.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|260156088|gb|EEW91168.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261738060|gb|EEY26056.1| exodeoxyribonuclease III [Brucella sp. F5/99] Length = 279 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 103/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN R L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 51 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 101 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 149 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 150 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 208 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 209 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 261 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 262 -----RAWEKPSDHVPVTVTL 277 >gi|260563899|ref|ZP_05834385.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260153915|gb|EEW89007.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] Length = 279 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 103/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN R L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 51 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 101 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 149 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 150 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 208 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 209 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 261 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 262 -----RAWEKPSDHVPVTVTL 277 >gi|189024059|ref|YP_001934827.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297248222|ref|ZP_06931940.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] gi|189019631|gb|ACD72353.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297175391|gb|EFH34738.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] Length = 296 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + R L+ + + DIV Sbjct: 24 CLPCPARAHNHYGMKIATWNIN------------SVKAR----IDNLQHWLRESSPDIVC 67 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 68 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 117 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 118 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 166 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 167 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 225 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 226 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 278 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 279 -----RAWEKPSDHVPVTVTL 294 >gi|296273651|ref|YP_003656282.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296097825|gb|ADG93775.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 517 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 42/225 (18%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSD---------Y 54 + + ++A+ + S+N+ + + +K + T S+ Sbjct: 2 IIRTIFLIFFTYNLTLAKDFTVASYNVENFFDLKYDKTEYKEFIPNTKSNWNKTTYNTKL 61 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNA---VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + +LD D++ LQE+ S A +AK P+ + IF + Sbjct: 62 KHIVKVINDLDKDVIALQEVESKQAFDELAKNLPQYKYSIFKKYKTSS------------ 109 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +A+ + + D NR +++ + I+ K V + H Sbjct: 110 IGLAI------LSKYEISDYKLIDVKHSKVNRPILKVTLNIDNHKFIVFNNH-------- 155 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 S +L Q ++++I V +VI GD N N Sbjct: 156 WPSKRNEESQRVLYAQ--AIEEYIKNL-NEDVDYVILGDLNSNYN 197 >gi|228995361|ref|ZP_04155046.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228764403|gb|EEM13266.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 354 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 116/315 (36%), Gaps = 56/315 (17%) Query: 20 VAQKVRLVSWNINT--LSEQEGVSLWKNSVKR------TTSDYTLLRQYAKNLDADIVFL 71 V ++ + ++NI L + + L + R T + + + + + D+D + + Sbjct: 53 VGEEFKATTFNIGYGGLDKDQDFFLDGGTGSRSSSKEQTEKNISNMLSFLQKEDSDFILV 112 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------- 122 QEM + + F N + F + + + N + ++K + Sbjct: 113 QEMDEKSL--RSFDVNQYKAFQDGLKDHASTFGYNFNAQWVPVPIKKPHGYTNSGLGSFS 170 Query: 123 ------VLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLEN 175 V + P +R VE V NGK + ++++HL + D N Sbjct: 171 KYKVEEVTRYQLPGREMWLRQLFELDRAIVEQKVPVDNGKYLRMVNVHLSA---YDKGGN 227 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 QQ ++LK+++ + ++ V+ GD+N+ ++ + D +K P + Sbjct: 228 IR-------KQQVEFLKEYMNKHYKNGDYLVLGGDWNQLLSDVQLKDPKFKEEWPEWLVQ 280 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFV--MDQNAYKFLIQESFSEIL------YNEDDIKS 287 D + +D V + N ++ E+F I+ N + + Sbjct: 281 LPEDFTDGG--------FQWAVDDTVWTVRDNVKSYVEDENFVTIIDGFLVSPNVEIVSV 332 Query: 288 RGKRL----SDHCPI 298 +G L SDH P+ Sbjct: 333 QGHDLKFENSDHNPV 347 >gi|327462960|gb|EGF09281.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1] Length = 749 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ +++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|324994996|gb|EGC26909.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK678] Length = 749 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ +++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|324993691|gb|EGC25610.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK405] gi|325696321|gb|EGD38212.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK160] Length = 749 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ +++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L +I + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFIQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|319795420|ref|YP_004157060.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315597883|gb|ADU38949.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 274 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 49/203 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ ++NI +GV + + L + LDADIV LQE+ + A A Sbjct: 31 LRVATYNI-----HKGVQGIGPAR---RLEIHNLGHAIEQLDADIVCLQEVRKMNRQAAA 82 Query: 82 K-----------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-AVRKKNVRVLQQSYP 129 + + Y T + H + N + T +R + + + Sbjct: 83 RFARWPELPQADFLAPEGYTAVYETNAVTRHG--EHGNALLTRWPVIRTGHQDISDHRFE 140 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G +++E+ G+ + + +HL S +Q Sbjct: 141 QRGLLH------------VVIEVEGQPVHAIVVHL--GLIKGSRV-----------RQIA 175 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 L+++I ++ + V+AGDFN Sbjct: 176 RLREFIDREVPAHEAVVVAGDFN 198 >gi|254495120|ref|ZP_05108044.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|85819470|gb|EAQ40627.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 325 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 100/299 (33%), Gaps = 60/299 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------- 75 + ++NI LS ++ +++ + ++ DI+ QE+ Sbjct: 55 SIATYNIGYLSGMTNNRPVPKPKSLFKANLQKVKKETQAVNPDIIAFQEIDYNASRSYHI 114 Query: 76 ----------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + N P W I ++I+ S +A +++ Sbjct: 115 NQEEEVASLGYNYSARTVNWDENYLPFPYWPISMHFGKVISGQSILSKYP----LANQER 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V + P R A + INGK+I +++IHL++F Sbjct: 171 VVLSRVEDSPFYRDAFYLE----RLAQIVKANINGKEIVIINIHLEAF------------ 214 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 ++Q Q ++ I K ++ P ++ GDFN + + + D + F Sbjct: 215 DKPTRAKQFQEVEA-IFNKYKNDYPTLLLGDFNARARDKSSVVQTFFKDDNIGNA-AFNY 272 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K+ + IDY + I Y + + ++ SDH P+ Sbjct: 273 DAIANTFDTKDPYER--IDYIFYTK-----------ETIEYVSGRVLNEYEQASDHLPV 318 >gi|325285170|ref|YP_004260960.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324320624|gb|ADY28089.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 344 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 96/326 (29%), Gaps = 76/326 (23%) Query: 1 MIRKYVLALVFFLVPCTASV--------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 ++ VL L +FLV + ++++N K + Sbjct: 69 LLSALVLFLGYFLVDSFIKFNFSTEKNNETSLTVMTYNTR--------GFNKYEWSSDKA 120 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + + D DI+ +QE +S R R N + Sbjct: 121 LGDKIIDFVLKEDPDIICIQE-------------------FSRVRYHQLKHRYKYNYVAP 161 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 V K + + YP+L + + N A + I V ++HL+S + Sbjct: 162 GFYVNK-VNQAIYSKYPILNTGELPFKLTNNIASFADIAYKNDTIRVYNLHLESLKVVPD 220 Query: 173 LENTYSPSCSLL---------SQQAQWLKDWITQKKESLVPF--VIAGDFNRKIN---YL 218 +E + S L QQ Q I Q+ P+ ++ GDFN Y Sbjct: 221 METISNEESSKLYGRITKSFKKQQDQAK---IVQEHIKGNPYKTIVCGDFNNNQYSNVYR 277 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D T + S + ID+ + + Sbjct: 278 TIKGDLLDTFNEKGSAYGRTYNFK---------YYPVRIDFILASKE------------- 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + K+ +LSDH P+ ++ Sbjct: 316 -FEVIAHKNYDNKLSDHFPVMASFNL 340 >gi|260545435|ref|ZP_05821176.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260096842|gb|EEW80717.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] Length = 279 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN + R L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNIN------------SVKAR----IDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 51 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 101 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 149 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 150 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 208 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A I + + + Sbjct: 209 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-- 261 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 262 -----RAWEKPSDHVPVTVTL 277 >gi|163843144|ref|YP_001627548.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] gi|163673867|gb|ABY37978.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] Length = 260 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKDLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKKRLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|332367348|gb|EGJ45082.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1059] Length = 736 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 335 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 389 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 390 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 448 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 449 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQNI 508 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 509 VVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 568 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 569 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 623 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 624 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 652 >gi|327490122|gb|EGF21910.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1058] Length = 749 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQNI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIVNHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|218901872|ref|YP_002449706.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820] gi|218535992|gb|ACK88390.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH820] Length = 333 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|326798265|ref|YP_004316084.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549029|gb|ADZ77414.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 259 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 104/301 (34%), Gaps = 59/301 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 +I ++ L+ + S QK++++S+NI+ + + + Sbjct: 7 VIMIFIALLLLIVQVERISAQQKLKIMSYNIHH-----------GADANEQDQLEAMAAF 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAV--R 117 K ADIV LQE+ S + + + + +++ + + A+ R Sbjct: 56 IKESGADIVGLQEVDSM--CRRSGNVDQPRVLAQKTGMHYTYTRHFAYDGGSYGQALLSR 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 R + + P+ + +V + + + +HL D Sbjct: 114 FPIERTVNERLPVSTGATTS------FLTAEVVVPTHRTLSIGVVHL------DYRAEAG 161 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +QA+ + I ++ PF++ GD N + + +T+ + Sbjct: 162 R------LRQAEIIDSIIK---KASHPFILTGDMNAEPQH--------ETLAVLSKQLIA 204 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ + K IDY ++D+ +I+ +L+ SDH P Sbjct: 205 TQGRDAFTYPTAPPKKK--IDYIMLDKRLKASVIEAKVLPVLF------------SDHLP 250 Query: 298 I 298 I Sbjct: 251 I 251 >gi|194290013|ref|YP_002005920.1| hypothetical protein RALTA_A1916 [Cupriavidus taiwanensis LMG 19424] gi|193223848|emb|CAQ69857.1| conserved hypothetical protein; Endonuclease/Exonuclease/phosphatase family [Cupriavidus taiwanensis LMG 19424] Length = 284 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 105/325 (32%), Gaps = 85/325 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + L+SWNI + + + R + DAD++ LQE+ Sbjct: 1 MELISWNIQW----GRGADGRVDLARQVDTLRAMA------DADVICLQEVTRGFTELRG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + + P + + ++ R N + + N + T + VR+ V + + Sbjct: 51 EPGIDQVAELTALLPG--YHVLFASGVDRRDRNGAHKQFGNLVATRLPVRE----VFRHA 104 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P S R A+E+ VE +++ V+ HL + + Q Sbjct: 105 LPWPADPHVASM--PRVALEVTVEAGPRRLRVICTHL------EYYSALQRAA------Q 150 Query: 188 AQWLKDWITQ----------KKESLVPF---------VIAGDFNRK---INYLGNNDDFW 225 A+ L+DW Q ++ PF ++ GDFN K I Y + F Sbjct: 151 AEALRDWHVQACDHASRPGRSEKWPGPFTPEPRPAEAILCGDFNSKPDDIAYRRMLEPFD 210 Query: 226 KTIDPNDSLIRFPK---EKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEIL 279 T P C + + P D+ + +N + + + Sbjct: 211 DTTTPWRDAWLHAHPGLPHAPTCAIHDKEQWPEPPFACDFMFVTENLAARIRRCEVNADT 270 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH PI + D Sbjct: 271 AD-----------SDHQPILLSLDL 284 >gi|294852226|ref|ZP_06792899.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] gi|294820815|gb|EFG37814.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] Length = 260 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKKRLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVGARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|313207216|ref|YP_004046393.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312446532|gb|ADQ82887.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|315022982|gb|EFT36003.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-YM] gi|325335338|gb|ADZ11612.1| Metal-dependent hydrolase [Riemerella anatipestifer RA-GD] Length = 286 Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 109/305 (35%), Gaps = 45/305 (14%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L + L+ + +Q ++L+++NI + +G+++W+N + T LL Y Sbjct: 8 LFLAWVLLFSSFYSSQNLKLMTFNIRYDNPDDGLNVWRNRILNTK---NLLEFYI----P 60 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI+ QE+ Y + + P + + N + + + + Sbjct: 61 DIIGFQEVLPNQYLDLKTILPS--YNSYSLGRDSENQGEACPL------FFNKNRFELLD 112 Query: 125 QQSYPLLGAKDSFSRA----GNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYS 178 ++ L + S+A NR ++++ N + + ++H F E + Sbjct: 113 SGTFWLSPTPNKISKAWGANLNRICSWVMLKDNISKSTLKIYNLH-----FDHESELSRK 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S ++++I + +E + ++ GDFN + + +L + Sbjct: 168 NS-------LALIQEYINKDREQNIYTLVMGDFNTTFSNQELLQQVLPPLAEASTLAKKT 220 Query: 239 KEKDSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + A K + IDY + + + Y + G+ DH P Sbjct: 221 LLNNGTFQAFGKKVGQSPRIDYIFV---------PKDTEVLQYQILSNQFYGQYPYDHFP 271 Query: 298 ISIDY 302 + + Sbjct: 272 VLTEI 276 >gi|296129478|ref|YP_003636728.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109] gi|296021293|gb|ADG74529.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109] Length = 1652 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 112/350 (32%), Gaps = 70/350 (20%) Query: 15 PCTASVAQKVRLVSWNI----NTLSEQ------------EGVSLWKNSVKRTTSDYTLLR 58 P A+V V + S+N+ TL + V++ +R D L+ Sbjct: 475 PTPAAVGGDVTVASFNVLNYFTTLGADTAACEAYRDRAGDPVTVSTGCAQRGAWDPDDLQ 534 Query: 59 QY-------AKNLDADIVFLQEMGS---------------YNAVAKVFPKNTWCIFYSTE 96 + LDAD+V L E+ + +A+ TW S++ Sbjct: 535 RQQDKIVAAIDALDADVVGLLEIENSAVVDGVADEALGTLVDALNAAAGAGTWAFVPSSD 594 Query: 97 RLINHSKRDSNND--IH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 L + + +D+ + I+ TA R R L + + +F+ A A Sbjct: 595 ELPDVALQDTITNALIYRTASVERTGESRALGTAS---ASGQAFANAREPIAQAFTPVGG 651 Query: 154 GKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS-----QQAQWLKDWITQKKESLVPFVI 207 G+ + V+ HLKS + + S +QA L+DW+ + + + Sbjct: 652 GEPVLVVVNHLKSKGSAGPWTGDADTGDGQGASNESRVRQATALRDWVPTVQGDVEAVAL 711 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN D + + + + + +D+ ++++ A Sbjct: 712 VGDFN----AYTREDPL--QVLYDAGYVDAVETLAPGQWSYSFSGLSGSLDHVLLNEAAR 765 Query: 268 KFLIQESFSEILYNEDDIKSRG--------------KRLSDHCPISIDYD 303 EI E R SDH P+ + Sbjct: 766 ARATGADVWEINAEESVALEYSRYNYHGSLFHADDPYRSSDHDPVLVGLS 815 >gi|218961593|ref|YP_001741368.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730250|emb|CAO81162.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 302 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 106/311 (34%), Gaps = 70/311 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++WN+ E +D T L++ L+A+++ QE+ Sbjct: 37 NFGTSNTLDVITWNLRNFPE--------------GTDLTTLKEMISALNAEVIAFQEIMD 82 Query: 77 YNA---VAKVFPKNTWCIFYSTERLINHSKRDSN----NDIHTAIAVRKKNVRVLQQSYP 129 YNA +A+ P C++ +T+ D+ N+ +T Sbjct: 83 YNAFMDLAEDIPYYAACVYSATDTYRLAYLYDTRSVTLNNQYTIF--------------- 127 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------TYSPS 180 ++ S R L + N ++++ H K+ + D+ + + Sbjct: 128 -----ENDSNPFPRPPYILDITWNNSNYFIINNHFKA--YGDNYIDESDSWDEEMRRRLA 180 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 C L ++I+ ++ GD N +I + + F + N + + Sbjct: 181 CQKL-------DNYISTSLSDKK-VIVLGDLNDQIAEPEDYNVFLSFL--NKPEEYYFAD 230 Query: 241 KDSRCNAN----KNLRNKIPIDYFVMDQNAYK-FLIQESFSEILYNEDDIK---SRGKRL 292 + + ID+ ++ ++ F S+ + E+ + + + Sbjct: 231 MPIALSPTYSNVSYPSSLSHIDHILITNELFEDFENAGSYCRTILAENWMLSWNTYSSTI 290 Query: 293 SDHCPISIDYD 303 SDH P+ I Sbjct: 291 SDHRPVGIRIS 301 >gi|333031000|ref|ZP_08459061.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741597|gb|EGJ72079.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 302 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 103/329 (31%), Gaps = 53/329 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L L FF+ +AQ +R+ S+NI + + +R L+R A Sbjct: 1 MKKLAL-LFFFIAVTLGGLAQDLRVGSYNIRY-ANEGDAQNGNGWAQRCPVQIQLIRYNA 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D++ QE+ + + + + I RK + Sbjct: 59 F----DVLGTQEVLHPQLLDLLAGLPEYDYIGVGRDDGKTEGE------YAPIFYRKDKI 108 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-------GKKIWVLDIHLKSFCFLDSLE 174 L+ + L + ++ G A+ + GK W ++H+ D + Sbjct: 109 ECLKSGHFWLSEETTYPNKGWDAALPRICTWGEFRDLKTGKSFWYFNLHM------DHVG 162 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDP 230 + L L + P ++ GDFN + ++ D + Sbjct: 163 VEARKHSASL-----VLSK--ITEMCGEEPVILTGDFNVDQTHNSYKILHDSDILQDSYE 215 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI-- 285 + + N N LR ID+ + ++ +++ + Sbjct: 216 VAEICYALNGTFNAFNIN--LRTDSRIDHVFVSPTFQVKKYGVLTDTYRSTNKEIKTVHE 273 Query: 286 ----------KSRGKRLSDHCPISIDYDF 304 + + SDH P+ ++ +F Sbjct: 274 GDFPKEVSFEVNEARLPSDHFPLVVELNF 302 >gi|229028475|ref|ZP_04184596.1| Sphingomyelinase C [Bacillus cereus AH1271] gi|228732856|gb|EEL83717.1| Sphingomyelinase C [Bacillus cereus AH1271] Length = 333 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 116/319 (36%), Gaps = 45/319 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIK 286 D+ N+ +DY + ++ K L +S + +K Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLK 313 Query: 287 SRGKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 314 KYTYNDYSDHYPVEATISM 332 >gi|153832474|ref|ZP_01985141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148871269|gb|EDL70141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 442 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 96/292 (32%), Gaps = 38/292 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++LV++NI L ++ + R Y L+ +Y K D+V LQE+ A Sbjct: 176 QHLKLVTYNIWAL-----PAVASHIGDR----YELIPEYVKGY--DVVALQEVFADGREA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + + N +D I R V Q +P + D F+ Sbjct: 225 FLRELAEEYPYQTKMLDKDGFN------IHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ V H S + E+ +Q + + + Sbjct: 279 DKGINYAEIIK---GGQAYHVFATHAASSDTEIAREHRQRQ-----FKQMRAMAKSLNIP 330 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS----LIRFPKEKDSRCNANKNLR- 252 V + GDFN + + G+ + + + A K L Sbjct: 331 ANETVVYS--GDFNVNKLKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSG 388 Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 389 GDNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 440 >gi|86748563|ref|YP_485059.1| endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris HaA2] gi|86571591|gb|ABD06148.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris HaA2] Length = 374 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 105/356 (29%), Gaps = 89/356 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYNA 79 + ++N+ L ++ S T Y + + LDAD++ QE+ A Sbjct: 8 ISFATFNLYNLQL-PDQPMYPKSRPYTQEQYDAKIAWIGSMVQRLDADVIAFQELWDRRA 66 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPL------ 130 + F S + K + + I A AVRK +++P Sbjct: 67 LEAAFQAAE----LSDRYAFAYIKEGAWDGIAVAAAVRKPWEIAGVKRHKAFPQGFRLKK 122 Query: 131 --------------------LGAKDSFSRAGNRRAVELLV------------------EI 152 D F + +++ + Sbjct: 123 RKHTMTALRANPPQADESIVPDENDEFGPSHEDERIDVSISEFSRSPLQVTVTHGTARSP 182 Query: 153 NGKKIWVLDIHLKS--FCFLDSLENTYSP----------SCSLLSQQAQWLKDWI---TQ 197 + I V HLKS LD E + S + + A+ I Sbjct: 183 SVPPIQVFCTHLKSKLSTPLDDEEYKDPDIRPHKDALGGALSAIRRTAEAAALRIILNDT 242 Query: 198 KKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN-----DSLIRFP----KEKDSR 244 +++ P ++ GD N + + + ++ + + + ++ S Sbjct: 243 MRDTDDPTIVLGDVNDGQFSNVLSILSGQPTFRVVAGSRAGARSDAGLYTGVTLQQLRSL 302 Query: 245 CNANKNLRN---KIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKRLSDH 295 + + ID+ ++ + Y + + +F E+ + D + SDH Sbjct: 303 GDVYYTHEFKNVREVIDHALVSEQFYDYSDKRLWTFREMQFFNDHVAHASHAESDH 358 >gi|317495840|ref|ZP_07954203.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316914017|gb|EFV35500.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 696 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 100/327 (30%), Gaps = 54/327 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 K+ + S+NI S + + D + DI+ L E+ Sbjct: 312 PSEDKLTIASYNIENFSAN---NNGHDETPEEKVDKIANSFIKEVHSPDIITLIEVQDNN 368 Query: 77 --------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ + + + +I A K Sbjct: 369 GGVNDGTVDGVKSGEKLAQRIKQLGGPEYK-YTEIAPVDGKDGGKPGANIRVAYLYNPKR 427 Query: 121 VRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 V ++ + P + R+++ E G++I V+ H Sbjct: 428 VTLVGKDKGGSEEAARFVNGHLEKNPARIDPTNVHFDKVRKSLAAEFEFKGERIVVIANH 487 Query: 164 LKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217 LKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 488 LKSKIGDDAIYGSNQPSVENTKSKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFN----D 543 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 +D KTI N+ + + + + +D ++ +N ++ Sbjct: 544 FEFSDSV-KTIVGNELVNLMAEHDAGDRYSYFYRGSNQSLDNILVSKNIKDKVVFSPVHI 602 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 603 ----NASFMEEHGRASDHDPVVVQIDF 625 >gi|327474564|gb|EGF19969.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK408] Length = 749 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + K+ + S+NI S + V R + + + DI+ L Sbjct: 348 ISPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] Length = 331 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 104/335 (31%), Gaps = 59/335 (17%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQEMG 75 +RLV++N+ S + + L R D L + LDAD + + E Sbjct: 1 MRLVTYNVEWFSALFDRADRLVLDGKLSGRHGIDRATQARALAKVFTALDADGIMVIEAP 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAI--------AVRKKNVRVLQQ 126 N+ + + R S ++ AV Sbjct: 61 DTNSRQQSVRALEHFAAEAGLRAREAISGFSNDTQQEITFLYDPDVMDAVHTPGQNDAAP 120 Query: 127 SYPLLGAKDSFSRAG------NRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + D A ++ +EL V+ G + ++ HLKS Sbjct: 121 RFDGVFHIDLDIDAQKDEVAFSKPPLELTVKTKGGTSLALIGAHLKS---KAPHGARTPA 177 Query: 180 SCSLLS--------QQAQWLKDWITQKKESLVPFVIAGD-------------FNRK---- 214 + + LS QA WL+ I Q+ ++ GD FNR Sbjct: 178 AVTTLSIANRRKQLAQAIWLRRRIDQRLAEGQDVIVLGDLNDGPGLDQYEKLFNRSSVEI 237 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN----AYKFL 270 + +D +++ +R N +DY ++ ++ Sbjct: 238 VMNSDLHDPHAQSLLA--PRLRVLPSTARFYNKETRRYFSALLDYIMLSPGLMRHQPRWR 295 Query: 271 IQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 I F + Y + ++ + SDH P+S+D D Sbjct: 296 IWHPFEDAACYEDAPLREALLQASDHFPVSLDIDL 330 >gi|327287974|ref|XP_003228703.1| PREDICTED: deoxyribonuclease-1-like 2-like [Anolis carolinensis] Length = 277 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 104/309 (33%), Gaps = 51/309 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-LRQYAKNLD 65 L L+ F + A +R+ ++NI K S + T+ L +Y Sbjct: 4 LLLLVFGLVSLAQTVSPLRICAFNIQ------SFGDTKLSDEGTSKIIVKVLSRY----- 52 Query: 66 ADIVFLQEM--GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI +QE+ +AV ++ K + S R++ +++ I Sbjct: 53 -DIALVQEVRDSDLSAVNELMERLNRASKEPYEFEIS-----QSLGRENYKEMYLFIYRT 106 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V Q +P S + + + E NGK++ ++ +H + N Sbjct: 107 SSVSVVDQYQFPSKSNAFSRAPFILKFSAS---ESNGKELILVPLH--------TAPNDA 155 Query: 178 SPSCSLLSQ-QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 L + + W + GDFN +Y+G D + ++ Sbjct: 156 VAEIDALYDVYLKIIDKW------GTDNMMFLGDFNADCSYVGKKDWASIRLRTSEVFKW 209 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--S 293 +++ + + D V+ K++ S + E+ S+ K L S Sbjct: 210 LIPDEEDTTVGHSDCAY----DRIVVSGAQMKKWVKPNSAKVFDFQEEFKLSQEKALAVS 265 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 266 DHFPVEVTL 274 >gi|23501759|ref|NP_697886.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161618833|ref|YP_001592720.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225627361|ref|ZP_03785398.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225852385|ref|YP_002732618.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|254701637|ref|ZP_05163465.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|254704180|ref|ZP_05166008.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|254706917|ref|ZP_05168745.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|254709975|ref|ZP_05171786.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|254713975|ref|ZP_05175786.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|256031468|ref|ZP_05445082.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|256044546|ref|ZP_05447450.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|256060978|ref|ZP_05451136.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|256113411|ref|ZP_05454260.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|256159594|ref|ZP_05457356.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|256254874|ref|ZP_05460410.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|256264117|ref|ZP_05466649.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|256369301|ref|YP_003106809.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260168602|ref|ZP_05755413.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261222058|ref|ZP_05936339.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261314381|ref|ZP_05953578.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261317523|ref|ZP_05956720.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261321730|ref|ZP_05960927.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261324980|ref|ZP_05964177.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261752190|ref|ZP_05995899.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261754849|ref|ZP_05998558.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|265988558|ref|ZP_06101115.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|265990972|ref|ZP_06103529.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|265994809|ref|ZP_06107366.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|265998023|ref|ZP_06110580.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|23347687|gb|AAN29801.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161335644|gb|ABX61949.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225617366|gb|EEH14411.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225640750|gb|ACO00664.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|255999461|gb|ACU47860.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260920642|gb|EEX87295.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261294420|gb|EEX97916.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261296746|gb|EEY00243.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261300960|gb|EEY04457.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261303407|gb|EEY06904.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261741943|gb|EEY29869.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261744602|gb|EEY32528.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|262552491|gb|EEZ08481.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|262765922|gb|EEZ11711.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|263001756|gb|EEZ14331.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|263094335|gb|EEZ18180.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|264660755|gb|EEZ31016.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|326408891|gb|ADZ65956.1| exodeoxyribonuclease III Xth [Brucella melitensis M28] Length = 260 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKKRLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|148559237|ref|YP_001258847.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|148370494|gb|ABQ60473.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] Length = 279 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 102/321 (31%), Gaps = 81/321 (25%) Query: 13 LVPCTASVA--QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +PC A +++ +WNIN R L+ + + DIV Sbjct: 7 CLPCPARAHNHYGMKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVC 50 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYP 129 LQE+ S + + +A+ KK+ + + P Sbjct: 51 LQEIKSV----------DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP 100 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 DS +A + + + V+ ++L + +D+ + Y S Q Sbjct: 101 ---GDDSDEQARFIEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR- 149 Query: 190 WLKDWITQKKESLVPFVIAGDFN----------------------------RKINYLGNN 221 L++W ++ P V+AGD+N R++ LG Sbjct: 150 -LENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFT 208 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + D + + + + N I ID+ ++ A + + + Sbjct: 209 DAIRASTDESGVYSFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFTSANIEKHV-- 261 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH P+++ Sbjct: 262 -----RAWEKPSDHVPVTVTL 277 >gi|254693606|ref|ZP_05155434.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261213872|ref|ZP_05928153.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|260915479|gb|EEX82340.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] Length = 260 Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKCFNGVALLSKKSPDEINKGLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKKRLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|325690981|gb|EGD32981.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK115] Length = 749 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|307718261|ref|YP_003873793.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] gi|306531986|gb|ADN01520.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] Length = 311 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 73/195 (37%), Gaps = 24/195 (12%) Query: 26 LVSWNINTL--SEQEGVSLWKNSVKR--TTSD----YTLLRQYAKNLDADIVFLQEMGSY 77 + ++N+ L + ++G + T + + ++LDAD++ LQE+ + Sbjct: 25 VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + + H + +H A+ R V + Sbjct: 85 RVLGRLVSG-----YLADAGYRWHFLPEEEGAVHVAVLSRIPVEGVRVHALKDPRV---- 135 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R VE+ + G+++++ +HL S + L A+ L++ + Sbjct: 136 --AALRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRN---QLFLIARRLEE--IR 188 Query: 198 KKESLVPFVIAGDFN 212 + V ++ GDFN Sbjct: 189 RTAPGVHVLVGGDFN 203 >gi|196047076|ref|ZP_03114294.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108] gi|196022057|gb|EDX60746.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB108] Length = 333 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFN-RKINYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N +KIN N+D +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|49480244|ref|YP_034934.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331800|gb|AAT62446.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 378 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 128 DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 360 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 361 TYNDYSDHYPVEATISM 377 >gi|118476360|ref|YP_893511.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al Hakam] gi|118415585|gb|ABK84004.1| sphingomyelin phosphodiesterase [Bacillus thuringiensis str. Al Hakam] Length = 378 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFN-RKINYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N +KIN N+D +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 360 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 361 TYNDYSDHYPVEATISM 377 >gi|125718549|ref|YP_001035682.1| extracellular nuclease [Streptococcus sanguinis SK36] gi|125498466|gb|ABN45132.1| Extracellular nuclease, putative [Streptococcus sanguinis SK36] Length = 749 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTVASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V+++++ P + + R+++ E G+ I Sbjct: 462 LYNPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|52144632|ref|YP_082195.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L] gi|51978101|gb|AAU19651.1| sphingomyelin phosphodiesterase [Bacillus cereus E33L] Length = 378 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 109/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + DIV L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDIVILNEVF 127 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S+ +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 360 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 361 TYNDYSDHYPVEATISM 377 >gi|255533667|ref|YP_003094039.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255346651|gb|ACU05977.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 269 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 97/318 (30%), Gaps = 77/318 (24%) Query: 1 MIRKYVLALVFFL------------VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK 48 M R + FL P + + +R++S+NI+ + L Sbjct: 1 MNRITFFLIALFLQLNLRPEGYAQTKPADKNAGKTLRIMSYNIHHANPPSKPDLI----- 55 Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN- 107 D + + ADIV LQE+ + V++ N I H + + Sbjct: 56 ----DLDAIARVITASKADIVALQEVET--GVSRSGGANEAKILAEKTGFQYHFFKAIDY 109 Query: 108 NDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + IA+ R + P A R +++ +KI + HL Sbjct: 110 DGGDYGIAILSRYPLKEIRLVPLP------QQITAEKRILGYATIKVGKQKIIFANTHLD 163 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + + + L+ Q+ + + + + +P ++ GD N Sbjct: 164 A---------SRTDENRLVQMQSI-----LKEFEHAALPVILCGDLN------------- 196 Query: 226 KTIDPNDSLIRFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 ++ + + + C N + + IDY + L Sbjct: 197 -SVAGSSVISLLDAQFKRTCTENCPPTSPQINPRRTIDYIATKNVTWPLL---------- 245 Query: 281 NEDDIKSRGKRLSDHCPI 298 E + + SDH P+ Sbjct: 246 -EYQVIAETYA-SDHRPV 261 >gi|42523979|ref|NP_969359.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] gi|39576187|emb|CAE80352.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] Length = 343 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 114/340 (33%), Gaps = 67/340 (19%) Query: 11 FFLVPCTASVAQKVRL--VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 FL+ + + L W LS +++N + T D K ++ADI Sbjct: 19 LFLMFDGIPSKEALNLKEAHW--QRLSTS----VYENKPLKKTQDIAKA---LKEINADI 69 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV----- 123 + L E+G ++ N +F + +S +I +RK Sbjct: 70 IMLCEVGGLESL-----NNFNLLFMDEAYSPCLIEGNSERNIDVGFLIRKGLPFYFDLQS 124 Query: 124 ----------------LQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHL 164 L YP+ G K + S +R VEL + + + + +L HL Sbjct: 125 NKHRLINYLYPHERDSLAHGYPVKGGKITTSHKFSRDVVELKLFKSDRDKPFMIILLTHL 184 Query: 165 KSFCFLDSLE----NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 KS + ++ L + Q L +K VP ++AGDFN G Sbjct: 185 KSRLDPERIDPNGFERRQAELRTLIEIYQEL-----EKTHPQVPVMVAGDFNGNAGLTGT 239 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIP-----IDYFVMDQNAYKFLIQ 272 D+ +K I SL + RN ID+ + + +L Sbjct: 240 -DEEFKDIYNLTSLRDVLEVAQLEIEERATFYQVRNSSRADGRQIDFVFIPPLLHPYLKP 298 Query: 273 ESFSEILYNED---------DIKSRGKRLSDHCPISIDYD 303 S Y ++ ++ ++ SDH P+ + + Sbjct: 299 ASAHVHRYKDEFGMAHDIPRNMDAKLSLPSDHYPLVFEIE 338 >gi|149908150|ref|ZP_01896814.1| hypothetical protein PE36_01552 [Moritella sp. PE36] gi|149808692|gb|EDM68625.1| hypothetical protein PE36_01552 [Moritella sp. PE36] Length = 342 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 106/351 (30%), Gaps = 82/351 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYNA 79 +++ ++N+ + + + + +R Y D++ QE+ S ++ Sbjct: 2 LKIATFNLFNY-IEPPFACYDFDRIYDEQQWQKKQKWIRDYLAEHQPDVIGFQEVFSPDS 60 Query: 80 VAKVFPKNTW---CIFYSTERLINHSKRDSNNDI---HTAIAVRKKNVRVLQQSYPLLGA 133 + + + + + S + + ++ R I + A+ L + Sbjct: 61 LKALVAECDYPYFEVVDSADVIEDYIFRSPVVAIASRYPITAIAAVIPDGDLAVSMGLSS 120 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------------------------- 166 + FSR R ++EL + +H KS Sbjct: 121 EYQFSRKPLRASIEL---PHLGTTDCYVVHFKSKRPMLESEDNELATTKAVLDAFSKQMC 177 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY--------- 217 + S++ + LL QQ I ++ + P ++ GDFN +++ Sbjct: 178 GSWGSSMQRGSEAA--LLFQQM------IQRRLATNNPMMLMGDFNDVLDHDRDGILSHL 229 Query: 218 -----LGNNDDFWKTIDPNDSLI------------RFPKEKDSRCNANKNLRNK-IPIDY 259 N+D + I SL + A NK +DY Sbjct: 230 TMNTLRFNSDPQAQDIVKQFSLQDSWHLYQHAANGVVASSTPAPRPATHYFYNKGSVLDY 289 Query: 260 FVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 ++ + + Y+ D I R +DH + I+ Sbjct: 290 ILLSCEFNAEYQRSLYEVSDYHTYDRHLINPIYERDSESTDHAVVQINLQL 340 >gi|95928596|ref|ZP_01311343.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] gi|95135386|gb|EAT17038.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] Length = 230 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 91/289 (31%), Gaps = 73/289 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSY 77 +RL +WNI + +R D + + + + L AD++ LQE+ Sbjct: 5 SLRLATWNI--------HMAVGSDGQR---DLSRIIKVIRQLRADVIGLQEVDNQIDNDQ 53 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + ++ + I + S+ D N + T++ V L F Sbjct: 54 DDLHRLATQTGQQII--AGPTMKRSRGDYGNALLTSLPVNNVERYDLS-----------F 100 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + + +E + V HL + C+ L+ Sbjct: 101 KNREPRGLLIVELEWQHSPLHVAVTHL--GLRPRERRDQVRRLCTHLT------------ 146 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P V+ GDFN + F W +R K+ ++ ++ P Sbjct: 147 -AKERTPLVLMGDFN---------EWFIW------GRPLRRLKQHFGPIHSPATFPSRWP 190 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + + + ++ + SDH P+ + Sbjct: 191 LLQLDHILTEPQ-KCLVKKDVYRHTSVRYA---------SDHLPLVAEI 229 >gi|323351045|ref|ZP_08086702.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] gi|322122769|gb|EFX94478.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] Length = 749 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ +++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKTV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|332362279|gb|EGJ40079.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1056] Length = 749 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ +++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLASRIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|165872719|ref|ZP_02217348.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488] gi|167635172|ref|ZP_02393488.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442] gi|167640897|ref|ZP_02399155.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193] gi|170689667|ref|ZP_02880846.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465] gi|170709382|ref|ZP_02899794.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389] gi|177652826|ref|ZP_02935199.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174] gi|190568515|ref|ZP_03021421.1| sphingomyelin phosphodiesterase C [Bacillus anthracis Tsiankovskii-I] gi|196035669|ref|ZP_03103072.1| sphingomyelin phosphodiesterase C [Bacillus cereus W] gi|227816451|ref|YP_002816460.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684] gi|228932107|ref|ZP_04094998.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120326|ref|ZP_04249576.1| Sphingomyelinase C [Bacillus cereus 95/8201] gi|229600728|ref|YP_002865273.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248] gi|254684245|ref|ZP_05148105.1| sphingomyelinase C [Bacillus anthracis str. CNEVA-9066] gi|254725906|ref|ZP_05187688.1| sphingomyelinase C [Bacillus anthracis str. A1055] gi|254734392|ref|ZP_05192105.1| sphingomyelinase C [Bacillus anthracis str. Western North America USA6153] gi|254742078|ref|ZP_05199765.1| sphingomyelinase C [Bacillus anthracis str. Kruger B] gi|254754935|ref|ZP_05206969.1| sphingomyelinase C [Bacillus anthracis str. Vollum] gi|254762334|ref|ZP_05214178.1| sphingomyelinase C [Bacillus anthracis str. Australia 94] gi|301052327|ref|YP_003790538.1| sphingomyelinase [Bacillus anthracis CI] gi|164711580|gb|EDR17128.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0488] gi|167511117|gb|EDR86505.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0193] gi|167529431|gb|EDR92182.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0442] gi|170125703|gb|EDS94618.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0389] gi|170666368|gb|EDT17152.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0465] gi|172081860|gb|EDT66929.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0174] gi|190560309|gb|EDV14288.1| sphingomyelin phosphodiesterase C [Bacillus anthracis Tsiankovskii-I] gi|195991636|gb|EDX55601.1| sphingomyelin phosphodiesterase C [Bacillus cereus W] gi|227005668|gb|ACP15411.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. CDC 684] gi|228663136|gb|EEL18726.1| Sphingomyelinase C [Bacillus cereus 95/8201] gi|228827535|gb|EEM73278.1| Sphingomyelinase C [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229265136|gb|ACQ46773.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. A0248] gi|300374496|gb|ADK03400.1| sphingomyelinase [Bacillus cereus biovar anthracis str. CI] Length = 333 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|152986656|ref|YP_001346586.1| PKD domain-containing protein [Pseudomonas aeruginosa PA7] gi|150961814|gb|ABR83839.1| PKD domain containing protein [Pseudomonas aeruginosa PA7] Length = 780 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 109/336 (32%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPVVEGRLRVASFNVLNYFNGDGKGGGFPTSRGASTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSY-----NAVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + N +K S+ I + Sbjct: 506 VGLMEIENDGYGEFAAIADLVDGLNAGLPQGQRYAFV-----NPNRTKLGSDE-IAVGLI 559 Query: 116 VRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F + NR + + G+++ + HLKS C Sbjct: 560 YRSDRVRTYGAAAVLDRTVNPEFDDSKNRPTLAQTFQEITGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ ++I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLASDPTAAKDPDYLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRAAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNLEFKTPRQQDSLYSAEPYRASDHDPVVIGIDL 770 >gi|30260828|ref|NP_843205.1| sphingomyelinase C [Bacillus anthracis str. Ames] gi|47777842|ref|YP_017307.2| sphingomyelinase C [Bacillus anthracis str. 'Ames Ancestor'] gi|228913366|ref|ZP_04076999.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228944428|ref|ZP_04106801.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|30254277|gb|AAP24691.1| sphingomyelin phosphodiesterase C [Bacillus anthracis str. Ames] gi|47551547|gb|AAT29782.2| sphingomyelin phosphodiesterase C [Bacillus anthracis str. 'Ames Ancestor'] gi|228815330|gb|EEM61578.1| Sphingomyelinase C [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228846275|gb|EEM91294.1| Sphingomyelinase C [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 338 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 320 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 321 TYNDYSDHYPVEATISM 337 >gi|196042087|ref|ZP_03109372.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99] gi|196027112|gb|EDX65734.1| sphingomyelin phosphodiesterase C [Bacillus cereus NVH0597-99] Length = 333 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 107/310 (34%), Gaps = 41/310 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFDNSASDR 89 Query: 83 VFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + N S +A+ K V + Y Sbjct: 90 LLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKVQYVFANG 149 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D Sbjct: 150 CGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQD 204 Query: 194 WITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRCN 246 +I K +V+ GD N IN N+D +KT+ + D+ N Sbjct: 205 FIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATTN 264 Query: 247 ANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-LSD 294 + +DY + ++ K L +S + +K SD Sbjct: 265 SIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKYTYNDYSD 322 Query: 295 HCPISIDYDF 304 H P+ Sbjct: 323 HYPVEATISM 332 >gi|62289818|ref|YP_221611.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82699743|ref|YP_414317.1| AP endonuclease [Brucella melitensis biovar Abortus 2308] gi|254689123|ref|ZP_05152377.1| AP endonuclease [Brucella abortus bv. 6 str. 870] gi|254697256|ref|ZP_05159084.1| AP endonuclease [Brucella abortus bv. 2 str. 86/8/59] gi|254730155|ref|ZP_05188733.1| AP endonuclease [Brucella abortus bv. 4 str. 292] gi|256257372|ref|ZP_05462908.1| AP endonuclease [Brucella abortus bv. 9 str. C68] gi|260754622|ref|ZP_05866970.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260757845|ref|ZP_05870193.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260761668|ref|ZP_05874011.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260883649|ref|ZP_05895263.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|62195950|gb|AAX74250.1| Xth-1, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82615844|emb|CAJ10848.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|260668163|gb|EEX55103.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260672100|gb|EEX58921.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260674730|gb|EEX61551.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260873177|gb|EEX80246.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] Length = 260 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 100/308 (32%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + R L+ + + DIV LQE+ S Sbjct: 1 MKIATWNIN------------SVKAR----IDNLQHWLRESSPDIVCLQEIKSV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +A+ KK+ + + P DS +A Sbjct: 39 ----DEQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINKGLP---GDDSDEQARF 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + + V+ ++L + +D+ + Y S Q L++W ++ Sbjct: 92 IEGIYST---DTGVVRVVSLYLPNGNPIDTEKFPYKLS----WMQR--LENWAKKRLTLE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D + D + Sbjct: 143 EPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A I + + + ++ SD Sbjct: 203 SFWDYQAGAW-----QKNNGIRIDHLMLSPEATNRFISANIEKHV-------RAWEKPSD 250 Query: 295 HCPISIDY 302 H P+++ Sbjct: 251 HVPVTVTL 258 >gi|23013323|ref|ZP_00053232.1| COG3568: Metal-dependent hydrolase [Magnetospirillum magnetotacticum MS-1] Length = 330 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 109/337 (32%), Gaps = 67/337 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 +R+ ++N+ L E+ + ++R + L ADI+ LQE+ ++ Sbjct: 3 PLRIATFNLENLDERPVGGIDF------EDRLAVMRPQFQRLRADILCLQEVNTHAATKS 56 Query: 79 ------AVAKVFPKNTWC---IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+ ++ + +S R H N I + + +R + +V P Sbjct: 57 GPRLFTALDRLLAGTQYEGWPRVHSLNRGGVHPADKHNLVIVSRLPIR-SHRQVWHDLVP 115 Query: 130 LLGAKDSFSRAGNRRAVELLVE----------INGKKIWVLDIHLKS------------- 166 + + A + + G+ + V+D+HL++ Sbjct: 116 PCAYRPVRADPPPAEAQAVEWDRPILLAELELPGGRALHVIDVHLRAPRAVWLAGQKERF 175 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK----ESLVPFVIAGDFNRKINYLGNND 222 +L + + Q Q L+ + ++ ++ V+ GDFN G ++ Sbjct: 176 GRWLSVGGWAEGYFLAGVKQAGQSLEVRLLVEEIFDADADALVVVCGDFN-----AGEHE 230 Query: 223 DFWKTIDPNDS-----------LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFL 270 + I +D L+ + + + +D+ ++ + + Sbjct: 231 AGMRIIKGDDEDTGNGHLAMRMLVPLERSLPEAQRYSVIHHGRPVMLDHILVSRPLLGWY 290 Query: 271 IQESFSEILYNEDDI---KSRGKRLSDHCPISIDYDF 304 + ++ + S H P+ ++ Sbjct: 291 LGAEIHNETLGDELVSPALVLAPPQSYHAPVVAEFSL 327 >gi|315224062|ref|ZP_07865903.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] gi|314946033|gb|EFS98041.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] Length = 274 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 98/311 (31%), Gaps = 55/311 (17%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L T S+AQ + ++++NI Q+GV+ W + R +T+L + D Sbjct: 4 LLFILCFLPTFSIAQDLTVMTYNIRCEVPQDGVNAWTD-GNRKEKVFTVL----TEANPD 58 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRV 123 I +QE A+ + ++ H+AI +K + Sbjct: 59 IFGVQE-----AL-----PHQLKFLEERFPTYQREGVGRDDGKEAGEHSAIFFKKGRFTL 108 Query: 124 LQQSY------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L + P + + + NR + ++ WV ++H F + Sbjct: 109 LDKGNFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTTFWVFNLH-----FDHEGKVAQ 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ Q+ + + ++ GDFN + K Sbjct: 164 VQSADLVLQKIKEI--------AKGGKVILMGDFN----LPTEHPAVQKIASQLYDTQLS 211 Query: 238 PKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 P K + P ID+ + Q+S Y + + G S Sbjct: 212 PTNKTPNMGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPS 262 Query: 294 DHCPISIDYDF 304 DH P+ ++ Sbjct: 263 DHLPVWVELQL 273 >gi|188989673|ref|YP_001901683.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris str. B100] gi|167731433|emb|CAP49608.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris] Length = 572 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 101/340 (29%), Gaps = 65/340 (19%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQYAKN 63 L L P V +R+ S+N+ G + + RT + L + Sbjct: 256 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 315 Query: 64 ---LDADIVFLQEM-----GSYNAVAKVFP-------KNTWCIFYSTERLINHSKRDSNN 108 L AD+ L E+ AVA++ W S ++ Sbjct: 316 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPG-------DD 368 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS- 166 I I R V + + L G DS SR +A G V+ H KS Sbjct: 369 AIRVGIVYRSTQVTPVGKPATLTGGPFDSHSRVPLAQAFR---SSRGATFVVVANHFKSK 425 Query: 167 FCFLDSLENTYSP---SC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN------- 212 C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 426 GCGNASGADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETP 485 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 R + G D + + R +D+ ++ K L Sbjct: 486 MRSLRASGWQDA-FAVVGVKQPYSYVYDGMSGR------------LDHALLSPAMAKQLR 532 Query: 272 QESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 + I + D K R SDH P+ + + Sbjct: 533 GAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 572 >gi|156974066|ref|YP_001444973.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] gi|156525660|gb|ABU70746.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] Length = 446 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 96/292 (32%), Gaps = 38/292 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++LV++NI L ++ + R Y L+ +Y K D+V LQE+ A Sbjct: 180 QHLKLVTYNIWAL-----PAVASHIGDR----YELIPEYVKGY--DVVALQEVFADGREA 228 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + K + + N +D I R V Q +P + D F+ Sbjct: 229 FLRELAKEYPYQTKMLDKDGFN------IHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFA 282 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ V H S + E+ +Q + + + Sbjct: 283 DKGINYAEIIK---GGQAYHVFATHAASSDTDIAREHRQRQ-----FKQMRAMAKSLNIP 334 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS----LIRFPKEKDSRCNANKNLR- 252 V + GDFN + + G+ + + + A K L Sbjct: 335 ANETVVYS--GDFNVNKLKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSG 392 Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 393 GDNVEYLDYVMVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVL 444 >gi|148242745|ref|YP_001227902.1| exodeoxyribonuclease III [Synechococcus sp. RCC307] gi|147851055|emb|CAK28549.1| Exodeoxyribonuclease III [Synechococcus sp. RCC307] Length = 275 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 101/311 (32%), Gaps = 81/311 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N++ ++ L ++ + D++ LQE + A Sbjct: 1 MRIATWNVNSIRSRQS----------------HLLRWLEQAKPDVLGLQETKVEDAQFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + S ++ + +A+ R+ V LL ++ Sbjct: 45 AAMEEAGYRTVISGQKS------------YNGVALLSREPLEEVRIGFDALLPGDEAAIE 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ V + ++G + VL++++ + + S + Y + L+ ++ ++ Sbjct: 93 LSQQKRV-ISAWVDG--VRVLNLYVPNGSEVGSEKYAYKLA------WLDCLRRYLDVQR 143 Query: 200 ESLVPFVIAGDFN--------RK--------INYLGNNDDFWKTIDPN----------DS 233 E PF + GDFN + + + + S Sbjct: 144 EQGEPFCMLGDFNIGPEARDLHNPERSTGGIMASDAEREALKACLGDDLRDAFRMFEQGS 203 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--KR 291 + S ID+ +D E + + KS ++ Sbjct: 204 GHWSWWDYRSGAWNGD---RGWRIDHLYLD---------EELQQRALACEIHKSERGLEK 251 Query: 292 LSDHCPISIDY 302 SDH P+S+D Sbjct: 252 PSDHAPVSVDL 262 >gi|21229733|ref|NP_635650.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766610|ref|YP_241372.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] gi|21111221|gb|AAM39574.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571942|gb|AAY47352.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 606 Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 101/340 (29%), Gaps = 65/340 (19%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQYAKN 63 L L P V +R+ S+N+ G + + RT + L + Sbjct: 290 LTLPALPAPVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAKLVAT 349 Query: 64 ---LDADIVFLQEM-----GSYNAVAKVFP-------KNTWCIFYSTERLINHSKRDSNN 108 L AD+ L E+ AVA++ W S ++ Sbjct: 350 IVPLQADVAALMELENDGNDGDTAVAQLVAALNAAGKDKDWRFVDSGSGPG-------DD 402 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS- 166 I I R V + + L G DS SR +A G V+ H KS Sbjct: 403 AIRVGIVYRSTQVTPVGKPATLTGGPFDSHSRVPLAQAFR---SSRGATFVVVANHFKSK 459 Query: 167 FCFLDSLENTYSP---SC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN------- 212 C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 460 GCGNASGADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFNAYAMETP 519 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 R + G D + + R +D+ ++ K L Sbjct: 520 MRSLRASGWQDA-FAVVGVKQPYSYVYDGMSGR------------LDHALLSPAMAKQLR 566 Query: 272 QESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 + I + D K R SDH P+ + + Sbjct: 567 GAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 606 >gi|239817089|ref|YP_002945999.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239803666|gb|ACS20733.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 250 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 71/206 (34%), Gaps = 49/206 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSY 77 A +R+ ++NI +GV + + L + LDADIV LQE+ Sbjct: 5 AYNLRVATYNI-----HKGVQGIGLAR---RLEIHNLGHAIEQLDADIVCLQEVRKMNRQ 56 Query: 78 NAVA----------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-AVRKKNVRVLQQ 126 A+ + Y T + H + N + T +R + + Sbjct: 57 AALRFERWPELPQADFLAPEGYTAVYETNAITRHG--EHGNALLTRWPVIRTGHQDISDH 114 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + G +++E+ G+ + + +HL S + Sbjct: 115 RFEQRGLLH------------VVIEVEGRPVHAIVVHL--GLIKGSRV-----------R 149 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN 212 Q L+++I ++ V+AGDFN Sbjct: 150 QVARLREFIEREVPPGEAVVVAGDFN 175 >gi|254248065|ref|ZP_04941386.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124872841|gb|EAY64557.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 327 Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 116/321 (36%), Gaps = 56/321 (17%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 L+ +RL+ WNI + +GV + RT + L + D++ L Sbjct: 32 VLLAAADQGDSTMRLIDWNIQWGRDADGVV----DLPRTVAAIRRLGDF------DVLCL 81 Query: 72 QEM-------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVR 117 QE+ + +A + P + I + + + + AIA R Sbjct: 82 QELTRGFDALPGRPGPDQFAELAALLPG--YTIVDAIGADLPAIRPGAPRRQFGNAIATR 139 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLD 171 RVL+QS P D+ + + R A+++ ++ + + V+ HL + +D Sbjct: 140 LPVGRVLRQSLPWPA--DAGAPSMPRAALDIELQASFGSLRVVTTHLEYYSARQRLAQVD 197 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTID 229 +L + + +C+ + Q + + P ++ GDFN ++D + + ++ Sbjct: 198 ALRDRHREACAH-ADQPAPAETPEGPFSATGQPRDAIVCGDFN----SAFDSDAYRRFLE 252 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288 P F +R + I + ++ + ++ D + R Sbjct: 253 PIADAPGFVDAWIAR-HPGHTPPPTAGIY------DTVQWSDGPLACDFVFVTDTLLPRV 305 Query: 289 -------GKRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 306 IGCEIDGDVRASDHQPVLLEL 326 >gi|59711773|ref|YP_204549.1| endonuclease/exonuclease/phosphatase family protein [Vibrio fischeri ES114] gi|59479874|gb|AAW85661.1| endonuclease/exonuclease/phosphatase family superfamily [Vibrio fischeri ES114] Length = 325 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 31/183 (16%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L++D++ QE+ S NA+ + + + F + + + N A A R Sbjct: 34 ITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDGY-VFNSPVVAFASRYPI 92 Query: 121 VRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLE 174 + P++ + R G NR V +E+ I +H KS + Sbjct: 93 LNAQ----PVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVHFKSQRPKEPEV 148 Query: 175 NT--YSPSCSLLSQ-QAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 N S S L+Q + L W I Q+K++ V+ GDFN+ Sbjct: 149 NNEIDEESLSSLNQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQAIVVMGDFNKP 208 Query: 215 INY 217 + + Sbjct: 209 LFH 211 >gi|152969375|ref|YP_001334484.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893840|ref|YP_002918574.1| putative DNase [Klebsiella pneumoniae NTUH-K2044] gi|150954224|gb|ABR76254.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546156|dbj|BAH62507.1| putative DNase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 253 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 81/262 (30%), Gaps = 55/262 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR +++ ADIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + R + ++ +G I V+ +HL Sbjct: 93 HHGNAVLSRFPIEYYENRDISV-------GNGEKRGLLYCRIVPPRSGITIHVICVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + Q L +W+ P V+AGDFN D + Sbjct: 144 GLRADQRQ-----------AQLTMLAEWVNTLPA-GEPVVVAGDFN---------DWRQQ 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 P +R + P +D + + + Sbjct: 183 ANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQ----- 237 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S++ Sbjct: 238 ------WRHLSDHAPLSVEIHL 253 >gi|228925864|ref|ZP_04088948.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833879|gb|EEM79432.1| Sphingomyelinase C [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 333 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|158521044|ref|YP_001528914.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158509870|gb|ABW66837.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 347 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 95/276 (34%), Gaps = 47/276 (17%) Query: 3 RKYVLALVFFLVPCT--ASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLR 58 R + + +V C+ A A+ L S+N+ L + +G T + Sbjct: 8 RLISIISLLVIVACSGPAPAARTFTLASYNVENLFDAVYDGTEYDDYVPGSTQGWNKKMA 67 Query: 59 QY--------AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 ++ADIV LQE+ S A+ + RL +R I Sbjct: 68 DIKTANTAEAIGAINADIVCLQEVESKIALKNLLT-----------RLNTPKQRYPFYAI 116 Query: 111 H-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 T VR L ++P++ +D G R ++ ++ I+ K + V H KS Sbjct: 117 AQTPTPVR----CALVSTFPIVHTQDIVPGEGQRAILKAVLSIDKKHLTVFICHWKS--- 169 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 E+ P + L + + L FVI GDFN N + F Sbjct: 170 KSGPESRRIPYAAALRKAIEKL--------PPNTDFVITGDFNANYN---EHQTFADVAR 218 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ND + + K L N +D ++ + Sbjct: 219 FND-----TQGVTGINHVIKTLHNDALVDEKILADS 249 >gi|239831752|ref|ZP_04680081.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] gi|239824019|gb|EEQ95587.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] Length = 272 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 94/314 (29%), Gaps = 71/314 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P A +++ +WNIN R L + K DIV LQE Sbjct: 3 SPPQAHNHSGMKIATWNIN------------GVKAR----IDNLLHWLKESSPDIVCLQE 46 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLG 132 + S + + +A+ KK+ + + P Sbjct: 47 IKSV----------DDQFPRLEIEALGYHVETHGQKGFNGVALLSKKSPDEINRGLP--- 93 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 DS +A V + + V+ ++L + +D+ + Y S Q L+ Sbjct: 94 GDDSDEQARFIEGVYST---DKGVVRVVSLYLPNGNPVDTEKFPYKLS----WMQR--LE 144 Query: 193 DWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSL 234 W + P V+AGD+N R D ++ Sbjct: 145 LWARDRLALEEPLVLAGDYNVIPEPEDARNPGQW-VGDALFQPQSRQAFRRLENMGFTDA 203 Query: 235 IRFPKEKDS-----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 IR ++ A +N ID+ ++ A I + + Sbjct: 204 IRASTDEAGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEKHV-------RA 256 Query: 289 GKRLSDHCPISIDY 302 ++ SDH P++I Sbjct: 257 WEKPSDHVPVTIRL 270 >gi|163801984|ref|ZP_02195880.1| putative phospholipase C precursor [Vibrio sp. AND4] gi|159174125|gb|EDP58933.1| putative phospholipase C precursor [Vibrio sp. AND4] Length = 442 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 90/292 (30%), Gaps = 38/292 (13%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q + L+++NI +L + Y L+ Y K D+V LQE+ A Sbjct: 176 QHLNLMTYNI-W-------ALPAVASHIDDR-YELIPSYVKGF--DVVALQEVFADGREA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + K + + N +D I R V Q +P + D + Sbjct: 225 FLRELAKEYPYQTKMLDKDGFN------IHDGGVTIVSRYPIVNQAQYVFPDCSSADCLA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ + + H S + E+ +Q + + + Sbjct: 279 DKGINYAEIIK---GGQAYHIFNTHAASSDTEIAREHRQRQ-----FKQMRAMAQSLNIP 330 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS----LIRFPKEKDSRCNANKNLRN 253 V + GDFN + + + + + + A + Sbjct: 331 SNETVVYS--GDFNVNKLKFPDDYQQMIANLSAIEPEYSGYTESTFDPRINNFAGRTFSG 388 Query: 254 K---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +DY ++ +++ ++ + + LSDH P+S Sbjct: 389 DGSVEYLDYVMVSNEYGIKSQNDNYVDVPRSTAASIWQHYNLSDHFPVSTVL 440 >gi|328946887|gb|EGG41024.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1087] Length = 749 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 V K+ + S+NI S T + N DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401 Query: 72 QEMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ A++ T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IA--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V K+ + + P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGD 210 I ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FN-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|327462051|gb|EGF08380.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1057] Length = 720 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 V K+ + S+NI S T + N DI+ L Sbjct: 319 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 372 Query: 72 QEMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ A++ T+ + L ++I A Sbjct: 373 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 431 Query: 114 IA--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V K+ + + P A + + R+++ E G+ Sbjct: 432 FLYDPNRVKLVEKEAGTSDEAASFSNGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 491 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGD 210 I ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 492 IVIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 551 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 552 FN-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 606 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 607 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 636 >gi|325695083|gb|EGD36986.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK150] Length = 749 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGMSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 ++ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VIIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|229824863|ref|ZP_04450932.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] gi|229790866|gb|EEP26980.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] Length = 258 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 100/291 (34%), Gaps = 50/291 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++LV++NI EQ+G++ + L+ + DI+ QE+ + AV Sbjct: 2 GDIKLVTFNIRCDYEQDGINNFAFRKP-------LIVDKVNSTQPDIICFQEVLPHVAVW 54 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKD 135 + I + D AIA +K ++ S P + Sbjct: 55 LKATFTDYYIVGCGRS-------EDFADEQEAIAFKKDRFNLVNMSTFWMSETPYIPGSR 107 Query: 136 SFSRAG-NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 ++ R E+++ +L+ HL ++ S + L Q LK Sbjct: 108 YKKQSTCPRVTTEVVLYDIAEKNMFRLLNTHL---------DHEGSEA--RLLGLNQLLK 156 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + +P +IAGDFN + + + ++ D + + Sbjct: 157 KIDEEIIFPDIPVIIAGDFN-----AEPDSPEMQAVITSEKYYDLTAGIDFTFH--DYGK 209 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K IDY + +N + DD+K+ +SDH PI +D Sbjct: 210 TKEKIDYIFVSRNITCKKTE--------KWDDVKNGVY-ISDHYPIQVDIS 251 >gi|229016006|ref|ZP_04172963.1| Sphingomyelinase C [Bacillus cereus AH1273] gi|229022224|ref|ZP_04178770.1| Sphingomyelinase C [Bacillus cereus AH1272] gi|228739078|gb|EEL89528.1| Sphingomyelinase C [Bacillus cereus AH1272] gi|228745285|gb|EEL95330.1| Sphingomyelinase C [Bacillus cereus AH1273] Length = 333 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 122/326 (37%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 MSTNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNNDD----FWKTI-------DPN 231 ++Q Q ++++I K +V I GD N IN N+D +KT+ + Sbjct: 196 TKQLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTVTSWFKKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y++ SDH P+ Sbjct: 316 TYDDY---------SDHYPVESTISM 332 >gi|229195000|ref|ZP_04321777.1| Sphingomyelinase C [Bacillus cereus m1293] gi|228588435|gb|EEK46476.1| Sphingomyelinase C [Bacillus cereus m1293] Length = 338 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTV--TSWLKKY 320 Query: 289 GK-RLSDHCPISIDYDF 304 SDH P++ Sbjct: 321 TYDDYSDHYPVAATISM 337 >gi|146343957|ref|YP_001201813.1| putative exported DNAse, extended at the C-terminus relative to other homologues [Pseudomonas fluorescens SBW25] gi|146187769|emb|CAM96097.1| putative exported DNAse, extended at the C-terminus relative to other homologues [Pseudomonas fluorescens SBW25] Length = 376 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 48/303 (15%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 LV +VA R+ +WN L Y L A N+ D Sbjct: 10 LLVLATAISGVAVAADARVGTWNTMRLG------------NGDQKSYPALAAVAANV--D 55 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTER-------LINHSKRDSNNDIHTAIAVRKKN 120 ++ +QE+ + + + + S + + R Sbjct: 56 VLAVQEVMNDEGIQ------YLKLALEQRTREKWSSLCSSPVGSRSYKEQYC-FLSRDSA 108 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V+ + L K F R + +G + +H+ +P Sbjct: 109 VQYEDGAVSFLDRKHVFMREP--YSARFKSLSDGNTFALATVHIIYG----KSAADRTPE 162 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L +WL+ P ++ GDFN + +D ++++ ++ Sbjct: 163 LKELGNYWEWLEQ-----VYPGEPIMLMGDFN-----MPPSDPAFESLRA-RAIPMVTDG 211 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPIS 299 + +N + R D +Q+A + G+R +SDH P+ Sbjct: 212 --ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPAMLKVSHEDGRRAVSDHAPVF 269 Query: 300 IDY 302 Sbjct: 270 FQL 272 >gi|49183669|ref|YP_026921.1| sphingomyelinase C [Bacillus anthracis str. Sterne] gi|49177596|gb|AAT52972.1| sphingomyelinase C [Bacillus anthracis str. Sterne] Length = 378 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 187 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 188 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 242 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 243 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 302 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 303 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 360 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 361 TYNDYSDHYPVEATISM 377 >gi|324324718|gb|ADY19978.1| sphingomyelinase C [Bacillus thuringiensis serovar finitimus YBT-020] Length = 333 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 257 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 258 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|260772409|ref|ZP_05881325.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14] gi|260611548|gb|EEX36751.1| hypothetical protein VIB_000857 [Vibrio metschnikovii CIP 69.14] Length = 318 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 84/226 (37%), Gaps = 47/226 (20%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGSY 77 + L + N+ N L + + ++ T + + + L+AD++ QE+ S+ Sbjct: 2 TITLATINLFNYL--EPPNAFYQFDNIYTNEQWQKKNAWFATKIQQLNADVIGFQEVFSF 59 Query: 78 NAVAKVFPKNTW-CIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRV--LQQSYPL 130 A+ + + + +I ++ I+ A+A R +V LQ P Sbjct: 60 AALRQQMNALGYPHVVCVDSPMIE------DDYIYRHPVVALASRYPLTQVSPLQAVLPE 113 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QA 188 SF R +E+ I V +H KS + + + L + Q Sbjct: 114 QNQAFSFHRIPLHATIEV---PKLGAIDVYVVHFKS-----QRATEAAQAPNNLVEEWQQ 165 Query: 189 QWLKDW-----------------ITQKKESLVPFVIAGDFNRKINY 217 + L W I ++++ PFV+ GDFN+ +++ Sbjct: 166 ETLGRWLSTVQRGFEVNLTHQYIIHTRQKTQRPFVLMGDFNKPLHH 211 >gi|144900918|emb|CAM77782.1| predicted metal-dependent hydrolase (COG3568) [Magnetospirillum gryphiswaldense MSR-1] Length = 237 Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 79/262 (30%), Gaps = 53/262 (20%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE---RLINHSKRDSNNDI 110 + + L D+V LQE+ A+ + + N + R+ +I Sbjct: 14 LAAMTEALAELRPDVVLLQEVLDAPALGLHTGNT-----IAARLGCHVANLALREKPRNI 68 Query: 111 -------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + +AV + S PL D G R A+ + ++ + V ++H Sbjct: 69 EGIRADSRSGLAVLSRFPIRSTLSIPLPDHAD----DGERAALVVEIDAPAGPLTVTNLH 124 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L D + + + + + L I GDFN I N Sbjct: 125 LTHLAQNDLRQRQLAAAQQVTKRPGTAL---------------IGGDFNAPIESFALNAT 169 Query: 224 FWKTID---PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 W+ + D C ID+ + +++ L Sbjct: 170 GWRDCRSELGQPPQSTLTGQPDGPC-----------IDHLLWAGRGRP---PKTWRVDL- 214 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 + + +SDHC + +D Sbjct: 215 -DRLTRDGQPAISDHCAVVVDL 235 >gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] Length = 748 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 99/327 (30%), Gaps = 54/327 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 K+ + S+NI S + D + DI+ L E+ Sbjct: 322 PSEDKLTIASYNIENFSANNSG---HDETPEEKVDKIANSFIKEVHSPDIITLIEVQDNN 378 Query: 77 --------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ + + + +I A Sbjct: 379 GGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNPNR 437 Query: 121 VRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 V ++ + P S R+++ + G++I V+ H Sbjct: 438 VTLIGKEKGGSEEAARFVNGHLEKNPSRVDPTSVHFEKVRKSLAAEFDFKGERIVVIANH 497 Query: 164 LKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217 LKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 498 LKSKLGDDAIYGSNQPSVENTRPKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFN----D 553 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 +D KTI N+ + + + + + +D ++ +N ++ Sbjct: 554 FEFSDSV-KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNILISKNIKDKVVFSPVHI 612 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 613 ----NASFMEEHGRASDHDPVVVQIDF 635 >gi|229095326|ref|ZP_04226318.1| Sphingomyelinase C [Bacillus cereus Rock3-29] gi|229114275|ref|ZP_04243696.1| Sphingomyelinase C [Bacillus cereus Rock1-3] gi|228669295|gb|EEL24716.1| Sphingomyelinase C [Bacillus cereus Rock1-3] gi|228688185|gb|EEL42071.1| Sphingomyelinase C [Bacillus cereus Rock3-29] Length = 333 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 114/312 (36%), Gaps = 45/312 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQSERADLIGAAGYIK--NQDVVILNEVFDNSASDR 89 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + + D AI + V +Q + Sbjct: 90 LLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQYVFEKG 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V ++ N + V+ HL++ DS+ SP+ S+ ++Q Q + Sbjct: 150 CGPDNLSNKGF---VYTKIKRNDSFVHVIGTHLQA---EDSMCGKTSPA-SVRTKQLQEI 202 Query: 192 KDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSR 244 +++I K +V I GD N IN N+D +KT+ + D+ Sbjct: 203 QEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDAT 262 Query: 245 CNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-L 292 N+ +DY + ++ K L +S + K Sbjct: 263 TNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTV--TSWFKKYTYNDY 320 Query: 293 SDHCPISIDYDF 304 SDH P+ Sbjct: 321 SDHYPVEATISM 332 >gi|229131623|ref|ZP_04260505.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196] gi|228651849|gb|EEL07804.1| Sphingomyelinase C [Bacillus cereus BDRD-ST196] Length = 333 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 116/317 (36%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 MSTNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ D++ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 ++Q Q ++++I K +V I GD N IN N+D +KT+ + Sbjct: 196 TKQLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYK-FLIQESFSEILYNEDDI----KSR 288 D+ N+ +DY + ++ I+ + + + K Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEY 315 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYNDYSDHYPVEATISM 332 >gi|171915191|ref|ZP_02930661.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM 4136] Length = 331 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 84/256 (32%), Gaps = 43/256 (16%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 R ++ L ++ D+V LQE+ S + ++ H + + Sbjct: 111 RRNQNHAALETLLRDRQPDVVVLQEV-SPGWAEML--PRLKDLY-------PHQWLEYHR 160 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ + + ++ +G + + + G+ + +L++H Sbjct: 161 KGSWGLAI------LSRGAWEKVGLHKLGESGPKKLGMVAEFDFKGQPVSLLNVH----- 209 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + + + L W Q+++ ++AGDFN +K Sbjct: 210 -APHPTSAAEIADRHVMHEEIRL--WSVQRQQEGRAVIVAGDFN-----CTPWAWLYKDF 261 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L+ + + + L ++I ID+ + + + + Sbjct: 262 LYQTHLVDTSQGRLFEATRHVWLPDRIMIDHVFVS---SDWKVSG--------REVGPDF 310 Query: 289 GKRLSDHCPISIDYDF 304 G SDH P+ + D+ Sbjct: 311 G---SDHRPVFVSLDW 323 >gi|86138524|ref|ZP_01057097.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] gi|85824584|gb|EAQ44786.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] Length = 331 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 106/337 (31%), Gaps = 63/337 (18%) Query: 24 VRLVSWNINTLSEQEGVS----LWKNSVKRTTSDY----TLLRQYAKNLDADIV------ 69 +RLV++NI + + L S R D + + LDAD V Sbjct: 1 MRLVTYNIEWFAHLFDDADNLMLDDQSSGRYGVDRYTQGRAIAHVLQRLDADAVMVVEAP 60 Query: 70 ----------FLQEMGSYNAVA-----KVFPKNTWC-IFYSTERLINHSKRDSNNDIHTA 113 L+ + + F +T I + + + D Sbjct: 61 NTGRKQRCTRALERFAAEAGLRTDTAVSGFATDTHQEIALLYDPAVLDVEADPQASKR-- 118 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC----- 168 A R + ++ + FS+ V G + ++ HLKS Sbjct: 119 -APRFDDSFLIDLDVDDRMDRVRFSKPPLELQVR---TKGGMALRLIGAHLKSKAPHGAE 174 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKINYLGN 220 + + + QA WL I + E+ ++ GD N ++ + Sbjct: 175 TAEEVARISIANRRKQLAQAIWLHRRIKEHVEAGENVIVMGDLNDGPGLDEYERLFGKSS 234 Query: 221 NDDFW--KTIDPNDSLIRFPKE----KDSRC-NANKNLRNKIPIDYFVMDQN----AYKF 269 + + DP+ + P+E SR N + +DY ++ + Sbjct: 235 VEIVMGAELTDPHAQSLLKPREPVLPSTSRFYNPETKRYFRALLDYIMISHGLEAYGPHW 294 Query: 270 LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 I F + DDI R L SDH P+S+D + Sbjct: 295 RIWHPFEDAE-CYDDIPLREALLAASDHFPVSLDLEL 330 >gi|127511624|ref|YP_001092821.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126636919|gb|ABO22562.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 357 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 109/355 (30%), Gaps = 74/355 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQ 72 T++ A ++R+ S+N+ N++ T + + +R+Y + D ++ Q Sbjct: 4 TSAAASQIRIASFNLYNFIAPPDAYYDFNNIY-TQAQWQQKCDWIRRYLASHDPCVIGFQ 62 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-- 130 E+ S A+ + + + F + +R S A+A + + Sbjct: 63 EVFSIEALQALLAEAGYPYFVTVDR-PEVSDDFIYRHPVLALASKYPILSYEPCDIDQTV 121 Query: 131 -----LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC------------FLDSL 173 + +SR R + L + +H KS Sbjct: 122 ASVMGIAPGFQYSRLPLRATIAL---PHLGPCDCYLVHFKSKRAQFDPELAVTPDSGSEP 178 Query: 174 ENTYSPSCSLLSQQA----QWLKDW-----------------ITQKKESLVPFVIAGDFN 212 + S S ++ +A + W ++ ++ P ++ GDFN Sbjct: 179 AASQSDSLTIEKSEALFAIEAAAKWASSLIRGSEASLLRVAIARRRIDTRYPVILMGDFN 238 Query: 213 RKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN----ANKNLRNK 254 + ++ ++ D+ + + + S + N+ Sbjct: 239 DSLAGGVLSALVSEDSRLLGVLGEEAFQDYRLQDAYLLHERSEYSPTSVARAPTHYHLNR 298 Query: 255 -IPIDYFVMD---QNAYKFLIQESFSEILYNEDDIKSRGKRLS---DHCPISIDY 302 IDY ++ + + Y+ I + R S DH P+ + Sbjct: 299 GEVIDYILLSNEFDPHNHQCLAQVSQYHTYDSHLINPQYDRDSHSTDHAPVMVSL 353 >gi|327470461|gb|EGF15917.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK330] Length = 749 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 104/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V+++++ P + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKDAGNSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|325687087|gb|EGD29110.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK72] Length = 749 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 V K+ + S+NI S T + N DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETP------EEKVTKIANSFINEIHSPDIITL 401 Query: 72 QEMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ A++ T+ + L ++I A Sbjct: 402 IEVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVA 460 Query: 114 IA--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V K+ + + P A + + R+++ E G+ Sbjct: 461 FLYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQH 520 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGD 210 I V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GD Sbjct: 521 IVVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGD 580 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K + N+ + + + + + +D + +N Sbjct: 581 FN-----DFEFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKA 635 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + DF Sbjct: 636 VFAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|229056444|ref|ZP_04195857.1| Sphingomyelinase C [Bacillus cereus AH603] gi|228720918|gb|EEL72467.1| Sphingomyelinase C [Bacillus cereus AH603] Length = 333 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSVNQNNTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + + D AI + V + Sbjct: 83 DNSASDRLLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDD-----FWKTI-------DPN 231 ++Q Q ++++I K +V I GD N NN + +KT+ + Sbjct: 196 TKQLQEIQEFIKNKNIPNNEYVLIGGDMNVNKINAENNSNSEYASMFKTLHASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENNVLQPKSPEWSVTSWFQKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 YN+ SDH P+ Sbjct: 316 TYNDY---------SDHYPVEATISM 332 >gi|153005530|ref|YP_001379855.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029103|gb|ABS26871.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 260 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 89/284 (31%), Gaps = 53/284 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++SWN+++L +G D + + +L DI LQE+G A Sbjct: 1 MRILSWNVHSLRGTDG-----------RRDPERIARVIADLRPDIAGLQEVGGELAADG- 48 Query: 84 FPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 P++ S + + I R L + R Sbjct: 49 -PRDVAEALASLTGMRSTFGPTMSFRGHPYGNGILTRHPIEATRTYD---LSVRGREPRG 104 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R VE+ G ++ HL L Q AQ L I + Sbjct: 105 CLRADVEV----GGVRVHFFSAHL-------GLHWRERR-----KQAAQLLSADILRDTA 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+ GDFN N + + R ++ ++ + +D Sbjct: 149 LAHPLVLVGDFNSLSNRSAVPRWLRRQLVDCAHAAR----NEAPTFPSRFPLLR--LDRV 202 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSR-GKRLSDHCPISIDYD 303 +D +F + + + + +R SDH P+ +D + Sbjct: 203 FVD---------SAFRVV--GCEVVHTPLARRASDHLPLVVDLE 235 >gi|114564406|ref|YP_751920.1| endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] gi|114335699|gb|ABI73081.1| Endonuclease/exonuclease/phosphatase [Shewanella frigidimarina NCIMB 400] Length = 377 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L ++ + DI+ QE+ S +A+A++ + F + + L AIA Sbjct: 52 LSEFISHNQPDIIAFQEVFSPDALARLTESLGYKYFVALD-LPEVVSDYVYRSPVVAIAS 110 Query: 117 RKKNVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK---S 166 + + S L SFSR R ++L V IHLK S Sbjct: 111 KYPIIDSANVSPDPQWINQLGLAESFSFSRKPLRATIQLPVF---GPCDCYVIHLKSKRS 167 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDW-----------------ITQKKESLVPFVIAG 209 D + + + Q L W + +++++ PF++ G Sbjct: 168 GVSRDDISESGLHGGADFVA-RQVLGRWASSLQRGSESALLCHQMLMRRQQTQQPFMLMG 226 Query: 210 DFN 212 DFN Sbjct: 227 DFN 229 >gi|262041126|ref|ZP_06014344.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041576|gb|EEW42629.1| endonuclease/exonuclease/phosphatase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 253 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 81/262 (30%), Gaps = 55/262 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR +++ +DIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRSVSSDIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + R + ++ +G I V+ +HL Sbjct: 93 HHGNAVLSRFPIEYYENRDISV-------GNGEKRGLLYCRIVPPRSGITIHVICVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + Q L +W+ P V+AGDFN D + Sbjct: 144 GLRADQRQ-----------AQLTMLAEWVNTLPA-GEPVVVAGDFN---------DWRQQ 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 P +R + P +D + + + Sbjct: 183 ANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQ----- 237 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S++ Sbjct: 238 ------WRHLSDHAPLSVEIHL 253 >gi|225862654|ref|YP_002748032.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102] gi|225787518|gb|ACO27735.1| sphingomyelin phosphodiesterase C [Bacillus cereus 03BB102] Length = 333 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 107/309 (34%), Gaps = 41/309 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A ++ Sbjct: 37 LKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFDNSASDRL 90 Query: 84 FPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + N S +A+ K V + Y Sbjct: 91 LGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKVQYVFANGC 150 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D+ Sbjct: 151 GPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQDF 205 Query: 195 ITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRCNA 247 I K +V+ GD N IN N+D +KT+ + D+ N+ Sbjct: 206 IKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATTNS 265 Query: 248 NKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-LSDH 295 +DY + ++ K L +S + +K SDH Sbjct: 266 IAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKYTYNDYSDH 323 Query: 296 CPISIDYDF 304 P+ Sbjct: 324 YPVEATISM 332 >gi|332359097|gb|EGJ36918.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK49] Length = 749 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 103/333 (30%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 A--------VRKKNVRVLQQS---------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V K+ + + P + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSDEAASFSGGHLVKNPARIEPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|53713044|ref|YP_099036.1| hypothetical protein BF1755 [Bacteroides fragilis YCH46] gi|52215909|dbj|BAD48502.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 287 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 101/326 (30%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W R D Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNW-----RYRKDRV 55 Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + D DI+ QE+ + P + + ++A Sbjct: 56 ANAIHF--YDVDILGTQEVLHNQLEDLKLRLP--EYGVVGVGREDGKEKGE------YSA 105 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 + +K VL Y P + + A R A + ++ + K+ + L+ HL Sbjct: 106 LWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL- 164 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 SL+ + L D +P ++ GDFN ++ +D Sbjct: 165 ----DHVGGMARREGISLMLDRVNELSD--------GLPVIVTGDFNSEL----ESDVIK 208 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESF 275 D + + S + + IDY + + Sbjct: 209 HVTDSANPEHLTDARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFV---------RNGL 259 Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301 + Y LSDH P+ + Sbjct: 260 KVLRYGILAETENNGFLSDHTPVLVT 285 >gi|269960777|ref|ZP_06175148.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834441|gb|EEZ88529.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 442 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 48/294 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L ++ + R Y L+ Y K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWAL-----PAIASHIGDR----YELIPDYVKGY--DVLALQEVFASGRDA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + ++ + + + +I+ I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNIYDGGVIIVSRYPIVNQAQYVFPDCSGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H SF + E +Q + + + Sbjct: 276 CFADKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FKQMRTMAQSL 327 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 V + GDFN + + G+ + + ++ S + N Sbjct: 328 NIPTNETVVYS--GDFNVNKLKFPGDYQQMIANLSAIEP--QYSGYTASTFDPRINNFAG 383 Query: 252 ------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 384 EALSGGENVEYLDYVMVSNEYGVKSFNDNRVDVPRSTAGSLWKHYNLSDHFPVS 437 >gi|121602003|ref|YP_988961.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|121602536|ref|YP_988991.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614180|gb|ABM44781.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614713|gb|ABM45314.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 263 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 98/305 (32%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNI R L ++ + DIV LQE + + Sbjct: 1 MRIATWNI------------AGIKARHE----TLCKWLQQNQPDIVCLQET---KTIDEN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++T + + +A+ L + P + Sbjct: 42 FPRDT-------IESLGYHIETHGQKKFNGVAI-------LSKKRPDEIITHLPGNNNDE 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +A + + N I + ++L + ++S + Y + + L Sbjct: 88 QARYIEAVYSTNKGAIRIASVYLPNGNPINSEKYLYK------MEWMERLYTHAKSLLTY 141 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKDS 243 P ++AGD+N +L ++ I D+L ++ Sbjct: 142 EEPLILAGDYNVIPTLSDAKNPQEWKHDALFLLQTRQAFQRIIHLGFYDALRSVTEDPSF 201 Query: 244 RCN---ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+F++ A LI Y++ +++ SDH P+ Sbjct: 202 SFWNFQAGAWFKNNGIRIDHFLLSSEAIDQLI------CAYSQTEVRGYK-NPSDHTPVW 254 Query: 300 IDYDF 304 I+ D+ Sbjct: 255 IELDY 259 >gi|229089738|ref|ZP_04220999.1| Sphingomyelinase C [Bacillus cereus Rock3-42] gi|228693637|gb|EEL47339.1| Sphingomyelinase C [Bacillus cereus Rock3-42] Length = 338 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 108/317 (34%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSNN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 147 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 148 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 202 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPK 239 Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 203 QLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTA 262 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSR 288 D+ N+ +DY + ++ K L +S + +K Sbjct: 263 TWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTV--TSWLKKY 320 Query: 289 GKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 321 TYNDYSDHYPVEATISM 337 >gi|332670164|ref|YP_004453172.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC 484] gi|332339202|gb|AEE45785.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC 484] Length = 1651 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 96/311 (30%), Gaps = 54/311 (17%) Query: 38 EGVSLWKNSVKRTTSDYTLLRQYAKN-------LDADIVFLQEMGS-------------- 76 + V++ + R D L + LDAD+V L E+ + Sbjct: 518 DPVTVDEGCDPRGAWDPEDLARQQAKIVAAINALDADVVGLLEIENSAVVDGVADEALGT 577 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTAIAV-RKKNVRVLQQSYPLLG 132 A+ TW S+ L + + +DS + I+ AV R + R L Sbjct: 578 LVAALNAQAGAGTWAFVPSSVDLPDVALQDSITNALIYRTAAVERTGDARALGSQSAD-- 635 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS-----Q 186 +F+ A A G+ + V+ HLKS + + S + Sbjct: 636 -GQAFANAREPIAQAFTPVGGGEPVLVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVR 694 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QA L+DW+ + + GDFN D + + + ++ Sbjct: 695 QATALRDWVPTIQGDTEAVALVGDFN----AYTREDPL--QVLYDAGYVDAVQQLAPGQW 748 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG--------------KRL 292 + +D+ ++++ A EI E R Sbjct: 749 SYTFSGLSGSLDHVLLNEAALARATGADVWEINAEESIALEYSRYNYHGTLFYADDVYRS 808 Query: 293 SDHCPISIDYD 303 SDH P+ + Sbjct: 809 SDHDPVVVGLT 819 >gi|27367041|ref|NP_762568.1| putative phospholipase C [Vibrio vulnificus CMCP6] gi|27358609|gb|AAO07558.1| Putative phospholipase C [Vibrio vulnificus CMCP6] Length = 442 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 100/296 (33%), Gaps = 50/296 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++++++NI L ++ + +R + L+ Y K D++ LQE+ +A Sbjct: 176 QHLKIMTYNIWAL-----PAIASHIGER----FELIPDYVKGY--DVLALQEVFANGRDA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + K + + +I+ I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H + D+ + +Q + L Sbjct: 276 CFADKGVNYAEVIK---GGEAYHVFATH-TASYDTDTARDYRQRQ----FKQMRALAQ-- 325 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--PKEKDSRCNANKNL-- 251 + K + V +GDFN ++ ++ + N S I +S + N Sbjct: 326 SLKIPANETVVYSGDFNVNKRKFPSD---YQQMIANLSAIEPHYSGYTESTFDPRINNFA 382 Query: 252 -------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 N +DY ++ + +I + + + LSDH P+S Sbjct: 383 GEPLSGGENVEYLDYVMVSNEYAVKGDNNNHVDIPRSTAESLWKHYNLSDHFPVST 438 >gi|119898900|ref|YP_934113.1| endonuclease/exonuclease/phosphatase family protein [Azoarcus sp. BH72] gi|119671313|emb|CAL95226.1| conserved hypothetical endonuclease/exonuclease/phosphatase family protein [Azoarcus sp. BH72] Length = 323 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 89/311 (28%), Gaps = 60/311 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIVFLQEM 74 ++ + Q + + +WNI R+ + + + D +V L+E Sbjct: 27 PSSCLDQTINIATWNI----------REFGKKPRSEAAIHYVAEILGQFDLISVVELRE- 75 Query: 75 GSYNAVAKVFP--KNTWCIFYS----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +V W YS + + + + Sbjct: 76 -NLGDLKRVLDILGPEWRAVYSGVVPDDGGNGERIGFIFDRRAVGF--QGMAAVAVPPRV 132 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + G R R + ++ H++ +T + + Sbjct: 133 KVGGEYLIQDRFWWRLPYMASFCAGSFEFILIAAHIRWG-----NGDTDRLA------EI 181 Query: 189 QWLKDWIT----QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L WI ++ + ++ GDFN +K I + PK + Sbjct: 182 ELLAQWIDVFRQSEQATTRDLIVVGDFN----IPSRRSALFKAITRYG--LHVPKALLAD 235 Query: 245 CNANKNLRNKIPIDYF-----------------VMDQNAYKFLIQESFSEILYNEDDIKS 287 + RNK D V+D + L+ E F L+ + Sbjct: 236 TFGSNLARNK-RYDQILQYPSEAYPDSFADKGGVLDFHVSDALVGELFPPELFPTMTMDK 294 Query: 288 RGKRLSDHCPI 298 +LSDH P+ Sbjct: 295 YTYQLSDHLPL 305 >gi|221066056|ref|ZP_03542161.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] gi|220711079|gb|EED66447.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] Length = 258 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/315 (11%), Positives = 92/315 (29%), Gaps = 92/315 (29%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +++ +WN + L+ +L +K T + + Q Sbjct: 1 MKIATWNVNSLSVRLPQVLEWLAANPVDALGLQELKLTDDKFPHM------------AFQ 48 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLL 131 E ++ + +A + ++ R + ++ P L Sbjct: 49 E-------------------------AGYTAVSHGQKTYNGVAWITRETGRDVVRNIPGL 83 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + ++ ++ +++ + + S + Y + Q L Sbjct: 84 DDEQARI-------IATTIDSPAGEVRLINGYFVNGQEPGSEKFAYK------MRWLQAL 130 Query: 192 KDWITQKKESLVPFVIAGDFN------------------RKINYLGNNDDFWKTIDPNDS 233 +DW+ ++ V+ GDFN ++ + +D+ Sbjct: 131 QDWVKEQMALHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVQERDHFQRLLQLGLSDA 190 Query: 234 LIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 F + + S + ID+ ++ + + S D + Sbjct: 191 FRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRSKVSACSV-------DRAPRK 243 Query: 289 GKRLSDHCPISIDYD 303 K+ SDH P+ + D Sbjct: 244 NKQPSDHAPVIVTLD 258 >gi|324991333|gb|EGC23266.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK353] Length = 749 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 103/333 (30%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 AV---------RKKNVRVLQQSY--------PLLGAKDSFSRAGNRRAVELLVEINGKKI 157 R+ S+ P + + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEREAGTSDEAASFSGGHLVKNPARISPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|260776998|ref|ZP_05885892.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] gi|260606664|gb|EEX32938.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] Length = 441 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 48/293 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++L+++NI L + + R Y L+ +Y K D++ LQE+ G Sbjct: 177 TLKLMTYNIWAL-----PVIASHIGDR----YALIPEYVKGY--DVLALQEVFASGREEF 225 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKDS 136 + ++ + + + +I+ I R V Q +P D Sbjct: 226 LRELAKEYPYQTKMLDK---------DGINIYDGGVTIVSRYPIVNQAQYVFPDCTGTDC 276 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ G A + GK V H SF + + +Q + L + Sbjct: 277 FADKGVNYAEVIK---GGKAYHVFATHTASFDTDTARDYRQRQ-----FKQIRELATLLN 328 Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 V + GDFN + G+ + + ++ +S + N Sbjct: 329 IPSNETVVYS--GDFNVNKRKFPGDYQQMIANLSAIEP--QYSGYTESTFDPRINDFAGE 384 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + D+ + LSDH P+S Sbjct: 385 AMSGGENVEYLDYVMVSDEYAVKAFNDNRVDVPRSTDERLWKHYNLSDHFPVS 437 >gi|332358304|gb|EGJ36130.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK355] Length = 749 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 105/333 (31%), Gaps = 57/333 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V K+ + S+NI S + V R + + + DI+ L Sbjct: 348 VSPIYPSEDKLTIASYNIENFSANAKKGETPEEKVTRIANSF-----INEIHSPDIITLI 402 Query: 73 EMGSY----------------NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 E+ A++ T+ + L ++I A Sbjct: 403 EVQDENGSVNDGTTSGVKSGEKLAARIKELGGKTYK-YTEVAPLDGQDGGKPGSNIRVAF 461 Query: 115 AVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKI 157 V+++++ P A + + R+++ E G+ I Sbjct: 462 LYDPNRVKLVEKEAGTSEEAASFSGGHLVKNPARIAPTNPAFTKVRKSLAAEFEFKGQHI 521 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDF 211 V+ HLKS D++ + P+ +QA+ L ++ + ++ + FV+ GDF Sbjct: 522 VVIANHLKSKIGDDAVYGSAQPAVQHTQAARIEQAKILNSFVQEGLRQNPNLKFVLTGDF 581 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N + K + N+ + + + + + +D + +N + Sbjct: 582 N-----DFEFSETAKALAGNELINLMQEHDVADRYSYFYRGSNQSLDNIFISKNLAGKAV 636 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 637 FAPVHI----NASFMEEHGRASDHDPVVVQLDF 665 >gi|301095832|ref|XP_002897015.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108444|gb|EEY66496.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 490 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 106/320 (33%), Gaps = 75/320 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAV 80 + + + SWNI +S + + LL + A L + DIV LQE+ + Sbjct: 189 RALLVASWNIRNISRR--------------KEIFLLERIADILKEFDIVALQEVRDLIVL 234 Query: 81 AKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 ++ P + + +E + S A R+ R++++ + + G+ D F Sbjct: 235 KRLKTMLPGWDYVV---SEPVGRMSPGAKKRVERYAFFYRRSAARLVEKCWLVEGSSDVF 291 Query: 138 SRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 +R E G ++ ++++H + E + + + Sbjct: 292 TRLPCVATFRATKESGVTGLELALINVH------VSFAEKESRHA------EIAEISRLA 339 Query: 196 TQKKES---LVPFVIAGDFN------------RKINYLGN--NDDFWKTIDPNDSLIRFP 238 + S V+ GDFN K+ + + + + + N I Sbjct: 340 NELSASVPINRKVVVLGDFNLSPQDVLGSLGSHKMALIRSPLSTTVFGKLYDN---IWLD 396 Query: 239 KEKDSRCNANK------------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + S CN +K + R P + Q +L Sbjct: 397 RADFSNCNIDKPTYCVDSGVLRVDWRFYPP-----SKGTCSRRSAQHPMDTMLPRLQTYM 451 Query: 287 SR---GKRLSDHCPISIDYD 303 SR G LSDHCP+ + + Sbjct: 452 SRVQCGYELSDHCPVWVAFT 471 >gi|229171459|ref|ZP_04299043.1| Sphingomyelinase C [Bacillus cereus MM3] gi|228611997|gb|EEK69235.1| Sphingomyelinase C [Bacillus cereus MM3] Length = 333 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + +A ++ N + + ++ + + D AI + V + Sbjct: 83 NNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTI-------DPN 231 + Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + E Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKEY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 YN+ SDH P+ Sbjct: 316 TYNDY---------SDHYPVEATISM 332 >gi|206579947|ref|YP_002239572.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella pneumoniae 342] gi|288936416|ref|YP_003440475.1| endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22] gi|290510529|ref|ZP_06549899.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55] gi|206569005|gb|ACI10781.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella pneumoniae 342] gi|288891125|gb|ADC59443.1| Endonuclease/exonuclease/phosphatase [Klebsiella variicola At-22] gi|289777245|gb|EFD85243.1| endonuclease/exonuclease/phosphatase [Klebsiella sp. 1_1_55] Length = 253 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 81/262 (30%), Gaps = 55/262 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR +++ ADIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + R + ++ +G I V+ +HL Sbjct: 93 HHGNAVLSRFPIEYYENRDISV-------GNGEKRGLLYCRIVPPESGVTIHVICVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + Q L +W+ P V+AGDFN D + Sbjct: 144 GLRADQRQ-----------AQLTMLAEWVNTLPA-GEPVVVAGDFN---------DWRQQ 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 P +R + P +D + + + Sbjct: 183 ANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASHPKALALKQ----- 237 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S++ Sbjct: 238 ------WRHLSDHAPLSVEIHL 253 >gi|49474410|ref|YP_032452.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49239914|emb|CAF26312.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 260 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 98/305 (32%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R + Y L + DIV LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHETLYQWL----QQNQPDIVCLQEIKSTD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +A+ L + P + + Sbjct: 42 FPCD-------AIESLGYHIETHGQKSFNGVAI-------LSKKTPDEVIRRLPGNNNDE 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + N I V ++L + + S + +Y + + L Sbjct: 88 QTRYIEAVYSTNKGVIRVASLYLPNGNPVKSEKYSYK------MEWMERLYAHAKSLLAY 141 Query: 202 LVPFVIAGDFN-------RKINYLGNNDDFWKTIDPND----------SLIRFPKEKDS- 243 P V+AGD+N K +ND + N IR + S Sbjct: 142 EEPLVLAGDYNVIPTPLDAKNPQKWSNDALFLPQTRNAFQRIVHLGFYDAIRNVTDTPSF 201 Query: 244 ---RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A LI Y++ +++ K SDH P+ Sbjct: 202 SFWDFQAGAWHKNNGIRIDHLLLSPEAVDQLI------CAYSQTEVRGYPKS-SDHAPVW 254 Query: 300 IDYDF 304 ID +F Sbjct: 255 IDLNF 259 >gi|108759975|ref|YP_631081.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108463855|gb|ABF89040.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 715 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 94/308 (30%), Gaps = 25/308 (8%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--YTLLRQYAKNLDADIV 69 + +A A WN+ +S + D R A++ Sbjct: 163 LTLSVSAPGAPVFTAGQWNLTYFGSDSRGPSNSSSDGGASDDLQIAGARDIMLAAGANLW 222 Query: 70 FLQEM---GSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVL 124 + EM ++ + P + F S + + + + Sbjct: 223 AMVEMVDTADFDLLKAQLPG--FDGFLSNDAAFVSGGTSPYGTSSQKLGVLYDSSLTFQS 280 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + D R R + + V+ +H+++ + Sbjct: 281 ATLVRIGNISDFADRPPLRVDFTTEINGAETPLTVIVVHMRANSADPTAPREARE----- 335 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIR 236 + + LK ++ ++ + FVI GD+N ++ + D ++ + + Sbjct: 336 -RASAALKAYLDEQLPTQHVFVI-GDWNDDVDESISLDPTSGAPLATPYQNFVSDSAHFT 393 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 F + S + ++ + +D+ + A + ES + Y ++ +SDH Sbjct: 394 FITRELSLAGDDTSIGFENVVDHTLATNEAADRYVAESARVL-YVDEWFPDFLNVVSDHR 452 Query: 297 PISIDYDF 304 P+ Y F Sbjct: 453 PVVSSYAF 460 >gi|291302648|ref|YP_003513926.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290571868|gb|ADD44833.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 278 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 86/313 (27%), Gaps = 63/313 (20%) Query: 8 ALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 A F V + + +R+ ++NI S V RT L D Sbjct: 12 AAFTFTVTPAQAHDRPTTLRVATYNI----HAGAGSDNVFDVDRTAEAIASL-------D 60 Query: 66 ADIVFLQEMG---------SYNAVAKVFPKNTWCIF---YSTERL-INHSKRDSNNDIHT 112 A ++ LQE+ A + F YS + +R+ N I + Sbjct: 61 ASVISLQEVDVHWHSRSQWRDLATELATTLDMHIFFGPIYSLDPTTPGAPRREFGNAILS 120 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLD 171 + V L + E+ +++NG + V HL Sbjct: 121 SY----PIVDAKNHEITRLSTQVPNPVPEPMPGFPEVEIDVNGTPVHVYSTHL------- 169 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 Y P ++ Q ++ + + + P ++ GDFN W+ + Sbjct: 170 ----DYRPDPAVRQAQVADMRRIM--RCDHGEPQLLLGDFNAPPEAPELR-PLWRKLSD- 221 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + IDY + + + Sbjct: 222 ---VWAKSGQPDPGYTYPASAPDRRIDYIAASKR--------------FKVKSAATPTTL 264 Query: 292 LSDHCPISIDYDF 304 SDH P+ + Sbjct: 265 ASDHLPVVAELTL 277 >gi|72160551|ref|YP_288208.1| metal-dependent hydrolase [Thermobifida fusca YX] gi|71914283|gb|AAZ54185.1| similar to Metal-dependent hydrolase [Thermobifida fusca YX] Length = 673 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 93/284 (32%), Gaps = 51/284 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 ++R+V++NI + G L T D + + + D+V L E+ Sbjct: 424 TPAGNELRVVAYNI-----RMGYGLTG------TYDIEGIAETIQRAQPDVVLLNEVD-- 470 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDS 136 F + R+++ + ++ AV + V YPL G + Sbjct: 471 ---RGWFLTGGQDTLGTLARMLDMQAVFAPSNGQLWGDAVLTRLPIVETVGYPLRGYGST 527 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A+ ++V+ +I V+ HL+S L QA L D I Sbjct: 528 TGAQ----ALAVVVKYETTEIEVIATHLQSPGTEEGEEPKE-----PTL--QAADLADII 576 Query: 196 -TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ P ++ GDFN N W+ ++ + + S + Sbjct: 577 IKRRSAHGRPVIVGGDFN-----FERNGAAWREMERAGLYDALFRVRPSPTFPADDP--D 629 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +D+ L++E + + + SDH + Sbjct: 630 KELDHIFATAG----LVREQGAVLPASY----------SDHVAV 659 >gi|229101435|ref|ZP_04232178.1| Sphingomyelinase C [Bacillus cereus Rock3-28] gi|228682011|gb|EEL36145.1| Sphingomyelinase C [Bacillus cereus Rock3-28] Length = 333 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 114/312 (36%), Gaps = 45/312 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVFDNSASDR 89 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + + D AI + V +Q + Sbjct: 90 LLGNLKREYPNQTAVLGRSSGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQYVFEKG 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V ++ N + V+ HL++ DS+ SP+ S+ ++Q Q + Sbjct: 150 CGPDNLSNKGF---VYTKIKKNDSFVHVIGTHLQA---EDSMCGKISPA-SVRTKQLQEI 202 Query: 192 KDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSR 244 +D+I K +V I GD N IN N+D +KT+ + D+ Sbjct: 203 QDFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDAT 262 Query: 245 CNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-L 292 N+ +DY + ++ K L +S + K Sbjct: 263 TNSIAKYNFPDSPAEYLDYIIASKDHANPSHIENKVLQPKSPQWTV--TSWFKKYTYNDY 320 Query: 293 SDHCPISIDYDF 304 SDH P+ Sbjct: 321 SDHYPVEATISM 332 >gi|329902691|ref|ZP_08273242.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium IMCC9480] gi|327548636|gb|EGF33289.1| hypothetical protein IMCC9480_801 [Oxalobacteraceae bacterium IMCC9480] Length = 562 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 91/304 (29%), Gaps = 51/304 (16%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---------YNAVAKV 83 TL+++ S + +R L LDAD++ L E+ + AV Sbjct: 7 TLNQRGANSSAELKRQRD-----KLVSTIVALDADVLGLMEIENTATVSLADLVAAVNAK 61 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 +T+ + S + K + K L + D G R Sbjct: 62 TGASTYALVNSGTPGTDAIKVAM---------IYKPARVSLIGQPQVPADPDFGVDGGLR 112 Query: 144 RAVE--LLVEINGKKIWVLDIHLKS--FC--FLDSLENTYSPSCSLLSQ--QAQWLKDWI 195 V N W + HLKS C S++ C +S+ QA L W+ Sbjct: 113 PPVAQRFAAIDNNGSFWFVVNHLKSKGSCPSSASSVDRDDGQGCWNVSRVRQASALNKWV 172 Query: 196 TQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 Q + ++ GDFN ++ D KTI+ + S Sbjct: 173 GQLVANSGEADVLMVGDFNAYLH----EDPI-KTIEAAGFEDLLKRLPASDRYTYVFNGE 227 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------------KRLSDHCPISI 300 +D+ + + + I +E R SDH P+ + Sbjct: 228 SGALDHGLASSKLSAQVTGVTVWHINADEPIALDYNTEFKTDDRYAVTPYRSSDHDPVLV 287 Query: 301 DYDF 304 + Sbjct: 288 GLNL 291 >gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] Length = 866 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 101/327 (30%), Gaps = 54/327 (16%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 K+ + S+NI S + + D + DI+ L E+ Sbjct: 323 PAEDKLTIASYNIENFSAN---NNGHDETPEEKVDKIANSFIKEVHSPDIITLIEVQDNN 379 Query: 77 --------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ + + + +I A K Sbjct: 380 GGVNDGTVDGVKSGEKLAQRIKSLGGPDYK-YTEIAPVDGKDGGKPGANIRVAYLYNPKR 438 Query: 121 VRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 V ++ + P S R+++ E G++I V+ H Sbjct: 439 VTLIGKEKGGSEEAARFVNGHLEKNPARIDPTSVHFEKVRKSLAAEFEFKGERIVVIANH 498 Query: 164 LKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGDFNRKINY 217 LKS D++ + PS ++A+ L +I + ++ + FV+ GDFN Sbjct: 499 LKSKLGDDAIYGSNQPSVENTKAKRIEEAKILNAFIKEGLRQNPNLKFVLTGDFN----D 554 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 +D KTI N+ + + + + + +D ++ +N ++ Sbjct: 555 FEFSDSV-KTIVGNELVNLMAEHEQGDRYSYFYRGSNQSLDNVLISKNIKDKVVFSPVHI 613 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 614 ----NASFMEEHGRASDHDPVVVQIDF 636 >gi|27379872|ref|NP_771401.1| exonuclease III [Bradyrhizobium japonicum USDA 110] gi|27353025|dbj|BAC50026.1| exonuclease III [Bradyrhizobium japonicum USDA 110] Length = 273 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 104/315 (33%), Gaps = 69/315 (21%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P +V +R+ +WN+N + +R LL + K DIV LQE Sbjct: 1 MPLPGAVEMPIRVATWNVN------------SVRQR----IDLLLTWLKECQPDIVCLQE 44 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + K + + + ++ +A+ K +S Sbjct: 45 I-------KCVDEAFPRLEI---EALGYNVVTHGQKTFNGVALLSKLRFDETKSGLAGDD 94 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +D+ +R +E +V + + + ++L + + + + Y L ++ L+ Sbjct: 95 EDAHARF-----LEGVVTLKHGVLRIACLYLPNGNPVGTEKYPYK-----LKWMSRLLE- 143 Query: 194 WITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLI 235 + ++ ++ P ++AGDFN D +KT + Sbjct: 144 YSKERLKTEEPLILAGDFNVIPHARDVHNPAAWTE-DALFKTETRESFQSLLGLGLTDAL 202 Query: 236 RFPKEKDS-----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 R ++ A +N ID+ ++ A L D Sbjct: 203 RAVTDEPGLYTFWDYQAGAWQKNHGLRIDHLLLSPQASDRLANVGI-------DSYVRAW 255 Query: 290 KRLSDHCPISIDYDF 304 ++ SDH P+ D D Sbjct: 256 EKPSDHVPVWADLDL 270 >gi|319783180|ref|YP_004142656.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169068|gb|ADV12606.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 264 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 90/304 (29%), Gaps = 66/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN R L + DIV LQE+ + Sbjct: 1 MKIVTWNIN------------GVRAR----IGNLTHWLTESAPDIVCLQEIKTV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A + L+ + G + R Sbjct: 39 ----DEQFPRAEIEALGYNVETHGQKGFNGVA----LLSKLRFDEVIRGLPGDDADEQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + + + LS A+ L+ W ++ Sbjct: 91 F-IEGVFSTDKGALRVASLYLPNG----NPIDDEKKFPYKLSWMAR-LERWAEERLRLEE 144 Query: 204 PFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNANKNLR 252 V+AGD+N I+ + + + F + + +A Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDARDTYT 204 Query: 253 NKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ A S + + ++ SDH P++I Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257 Query: 301 DYDF 304 D Sbjct: 258 DLAL 261 >gi|256820874|ref|YP_003142153.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] gi|256582457|gb|ACU93592.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] Length = 274 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 99/311 (31%), Gaps = 55/311 (17%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L V T S+AQ + ++++NI Q+GV+ W + R +T+L + D Sbjct: 4 LLFILCVLPTFSIAQDLTVMTYNIRCEVPQDGVNAWTD-GNRKEKVFTVL----TEANPD 58 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRKKNVRV 123 I +QE A+ + ++ H+AI +K + Sbjct: 59 IFGVQE-----AL-----PHQLKFLEERFPTYQREGVGRDDGKGAGEHSAIFFKKGRFTL 108 Query: 124 LQQSY------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 L + P + + + NR + ++ WV ++H F + Sbjct: 109 LDKGNFWLSQTPEVPSLGWDATCCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQ 163 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ Q+ + + ++ GDFN + K Sbjct: 164 VQSADLVLQKIKEI--------AKGGKVILMGDFN----LPTEHPAVQKIASQLYDTQLS 211 Query: 238 PKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 P K + P ID+ + Q+S Y + + G S Sbjct: 212 PTNKTPNMGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDGLYPS 262 Query: 294 DHCPISIDYDF 304 DH P+ ++ Sbjct: 263 DHLPVWVELQL 273 >gi|197334477|ref|YP_002155962.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11] gi|197315967|gb|ACH65414.1| endonuclease/exonuclease/phosphatase [Vibrio fischeri MJ11] Length = 325 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 31/186 (16%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 R L++D++ QE+ S NA+ + + + F + + + N+ I A A R Sbjct: 31 RDKITELNSDVIGFQEVFSPNALEALVNELGYAYFCTVDEPKSEDGYVFNSPI-VAFASR 89 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEINGKKI-WVLDIHLKSFCFLD 171 + P++ K+ R G NR V +E+ I +H KS + Sbjct: 90 YPILSAQ----PVIAEKEQLERFGIEFEFNRIPVHASIELPHLGITDCYVVHFKSQRPKE 145 Query: 172 SLENT--YSPSCSLLSQ-QAQWLKDW-----------------ITQKKESLVPFVIAGDF 211 N + S L+Q + L W I Q+K++ V+ GDF Sbjct: 146 PEVNNEIDEENLSSLNQLHDEQLGSWLSTVQRGLEANILHNHIIQQRKKTSQAVVVMGDF 205 Query: 212 NRKINY 217 N+ + + Sbjct: 206 NKPLFH 211 >gi|150008872|ref|YP_001303615.1| hypothetical protein BDI_2262 [Parabacteroides distasonis ATCC 8503] gi|256841134|ref|ZP_05546641.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937296|gb|ABR43993.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256736977|gb|EEU50304.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 287 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 55/320 (17%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + WK D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKF-----RRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K +AD+ QE+ + + + + +V Sbjct: 54 ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN 175 K L + +G K + +L + N GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 SL+ +QA+ L +P ++ GDFN + +++ +P+D Sbjct: 169 ARHEGASLVLEQAKKLS--------ENLPIIVTGDFN----AVPSDEPIQVLTNPSDPRH 216 Query: 236 RFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKF---LIQESFSEILYNE 282 + + IDY + N ++ E+ + + Sbjct: 217 LTHSRTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFP-- 274 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDHCP+ Sbjct: 275 ----------SDHCPVISTL 284 >gi|90414419|ref|ZP_01222396.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK] gi|90324532|gb|EAS41088.1| hypothetical protein P3TCK_10118 [Photobacterium profundum 3TCK] Length = 357 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 100/345 (28%), Gaps = 61/345 (17%) Query: 17 TASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFL 71 T +++ +++ ++N+ N L + + + T + + +Y D++ Sbjct: 15 TQTLSDTIKIATFNLFNYL--EPPFAFYDFERIYTAEQWQKKQNWIAEYLIEYKPDVIGF 72 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S ++ + + F + AIA R + P Sbjct: 73 QEVFSPESLKNLVAAQGYAYFEVVDEA-EVIDDFICRSPVVAIASRYPITHIEAV-IPDE 130 Query: 132 GAKDSFSRAG----NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSL--- 183 + +R+ + +E+ + +H KS + EN+ Sbjct: 131 ELAVAMGLKNDFTFSRQPLLATIELPHIGECDCYVVHFKSKRPMIEHENSSHDESRTQTI 190 Query: 184 -LSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKIN--------- 216 + +A+ W I +++++ +P ++ GDFN ++ Sbjct: 191 IQTLKAEVTGSWGSSIQRGSEAALLLMSIIERREKTGLPMMLMGDFNDSLSDGVLAHLLT 250 Query: 217 ------YLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQN 265 +D + L + K +DY ++ Sbjct: 251 SSLRFISESESDVILAKYRLKDAWDLYQATDNCPEMAYRTPTHYYGMKKSILDYILLSCE 310 Query: 266 AYKFLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 F ++ D R + +DH + I Sbjct: 311 FDAQYHSSLFEISEHDTYDRHLINPSFERDSQSTDHGIVCITLAL 355 >gi|269118848|ref|YP_003307025.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268612726|gb|ACZ07094.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 283 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 102/290 (35%), Gaps = 51/290 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI V D L + K ++ DI+ +QE+ + Sbjct: 34 KIRVATYNI-------AAGANNFKV-----DLKLTAETIKKINPDIIAIQEVDRNTERS- 80 Query: 83 VFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-LGAKDSFSR 139 + S N + K IAV K+ V + L D+ Sbjct: 81 --GRTDQIKVLSELTGYNYVYGKTIDFQGGEYGIAVLSKHPIVSNEIIKLPYTNTDTKKE 138 Query: 140 AGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WIT 196 R A+ V++ G + ++ HL D E+ QQ + + + + Sbjct: 139 EEPRIALVTKVDVPGFEVPVTFINTHL------DWHEDPNIR-----LQQVRTINEVTLD 187 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + ++AGDFN +N + + +W T+ F + D R N Sbjct: 188 MRGIK----ILAGDFNDTLNSVIGREMERYWTTV--------FDGKTDHRTWPAVNPE-- 233 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID + NA + +++ + E D K +SDH P+ +D Sbjct: 234 VAIDQIFL-NNAQVWKVEKVYVPNTGTEKDTD--WKTVSDHIPVIVDLKL 280 >gi|28414377|gb|AAO40752.1| sphingomyelin-specific phospholipase [Bacillus cereus] Length = 333 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 103/275 (37%), Gaps = 35/275 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYK 268 D+ N+ +DY + ++ Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHAN 290 >gi|149370646|ref|ZP_01890335.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] gi|149356197|gb|EDM44754.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] Length = 350 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 99/320 (30%), Gaps = 59/320 (18%) Query: 1 MIRKYVLALVFFLVPCTASVA----------QKVRLVSWNINTLSEQEGVSLWKNSVKRT 50 M+ ++ L F + ++++S+N+ L + S K Sbjct: 69 MLSAVIIVLAFLQFNSFYKFSSDAISEENYKHTLKVLSYNV-HLFNSYHFKDFDASEK-- 125 Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + K DI+ LQE + K+ + + T+ + N N Sbjct: 126 -----KFNEIVKAYQPDILSLQEYSDADD-PKIVGYPYKYVHFKTKAVRN----GVNLKY 175 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + A+ K + + ++ A ++ + + + + + V ++HLKSF Sbjct: 176 YLGHAIYSKYPIINKGAFDFENAINNT--------LFVDIVKDKDTVRVYNLHLKSFGIS 227 Query: 171 DSLENTYSPSCSLL--------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S+ L QA + + K +S P +I GDFN + + Sbjct: 228 PSISKLQEGDKKKLLGRMSQSFKDQAIQVSAILDHKNKSNYPSIITGDFN-NTAFSYVYN 286 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + ++ + ID+ + E ++ Sbjct: 287 ELTEDMNDAYIEQGSGLGTTYSFDG-----FPFRIDFILA--------------EKYFDI 327 Query: 283 DDIKSRGKRLSDHCPISIDY 302 + + SDH PI Sbjct: 328 LSFTTIKETFSDHHPILSTL 347 >gi|157115453|ref|XP_001658213.1| nocturnin [Aedes aegypti] gi|108876911|gb|EAT41136.1| nocturnin [Aedes aegypti] Length = 418 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 20/204 (9%) Query: 16 CTASVAQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 A+ + ++R+ WN+ TL V +++ Y ++++ +N D DI+ L Sbjct: 90 AAAANSAQIRIFQWNMLSQTLGMHNDGFVKCPIDALTWECRRYQVIQEIVQN-DPDIICL 148 Query: 72 QEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 QE+ + + K+ + +F+ D+N A+ +K + +L + Sbjct: 149 QEVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGCAVFYKKDRLELLNHFTRI 208 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQA 188 L S A+ + N ++I V HLK+ L L N +Q Sbjct: 209 LEVWRVQSNQVAIAALFRTRDTN-QEICVTTTHLKARKGALLSKLRN----------EQG 257 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + L +I P ++ GDFN Sbjct: 258 KDLLYFIDG-VAEKRPVILCGDFN 280 >gi|229010104|ref|ZP_04167318.1| Sphingomyelinase C [Bacillus mycoides DSM 2048] gi|228751237|gb|EEM01049.1| Sphingomyelinase C [Bacillus mycoides DSM 2048] Length = 333 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 41/310 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNASNR 89 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + + D AI + V +Q + Sbjct: 90 LLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQYVFEKG 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q + Sbjct: 150 CGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQEI 202 Query: 192 KDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSR 244 +++I K +V I GD N IN N+D +KT+ + D+ Sbjct: 203 QEFIKNKNIPNNEYVLIGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDAT 262 Query: 245 CNANKNLRNK----IPIDYFVMDQNAYK-FLIQESFSEILYNEDDI----KSRGKR-LSD 294 N+ +DY + ++ I+ + + + K SD Sbjct: 263 TNSIAKYNFPDSPAEYLDYIITSKDHANPSYIENKVLQSKSPQWTVTSWLKEYTYNDYSD 322 Query: 295 HCPISIDYDF 304 H P+ Sbjct: 323 HYPVEATISM 332 >gi|238854506|ref|ZP_04644844.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 269-3] gi|282934100|ref|ZP_06339379.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 208-1] gi|238832859|gb|EEQ25158.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 269-3] gi|281301847|gb|EFA94112.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus jensenii 208-1] Length = 369 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 80/276 (28%), Gaps = 53/276 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K + D F QE+ + + + F N + + + S + + + A + + Sbjct: 114 IKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAENAFDDMGSSFAQNFHSAYIAFPLNNPH 171 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV-----------------EINGKKIWVLDIH 163 L S + V + N K++ +++ H Sbjct: 172 GFARS-GILALSKYHIDSSERRKYFVSSSLIEKFVDLDRCFNVMRLPVKNDKELVLINSH 230 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---- 219 + + + + +Q L + + + + GDFN Sbjct: 231 MSA--YDKGGLSK--------KKQLALLNHVMKAEIQKGNYVICGGDFNHAFGTKYVAHF 280 Query: 220 -----NNDDFWKTIDPN--DSLIRFPKEKDS----RCNANKNLRNKIPIDYFVMDQNAYK 268 +D + S +R +++ C + K ++D Sbjct: 281 KSEQKQHDWLAVLSQKDLASSGMRMITAQNADDVPTCRGSDIPYKKGVTYTTIVDG---- 336 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 FL+ + + YN D + DH P+ + + Sbjct: 337 FLVSPNVQAVSYNIDTQFAYA----DHNPVKLSFSL 368 >gi|326446445|ref|ZP_08221179.1| hypothetical protein SclaA2_35502 [Streptomyces clavuligerus ATCC 27064] Length = 300 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 61/306 (19%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL +P A A R+++WNI +++ R + +YA Sbjct: 29 ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASRA----AEIARYA----P 73 Query: 67 DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAI---AVRKKN 120 ++ LQE + + + +++ ++ H R A+ Sbjct: 74 QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 133 Query: 121 VRVLQQS--YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +S YP G++D R + + + G+ + V + HL Sbjct: 134 PMTDHESVEYPDGGSED-------RGYMAVTTTVGGRSVRVFNTHL---------AQRRQ 177 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + Q + L + + + + ++ GDFN N W + ++ P Sbjct: 178 EAVR--ADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTR-IW-ELSADEKSPCGP 229 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----DIKSRGKR-- 291 + C + + + DY + A ++ Y++ D+ + G Sbjct: 230 SSA-ADCEPTTDWQ--LTFDYIFLRGMAP---VEHGVHLTSYSDHHLVHTDVGAPGPTRP 283 Query: 292 LSDHCP 297 +S H P Sbjct: 284 VSTHAP 289 >gi|294817222|ref|ZP_06775864.1| Putative endonuclease/exonuclease/phosphatase family protein [Streptomyces clavuligerus ATCC 27064] gi|294322037|gb|EFG04172.1| Putative endonuclease/exonuclease/phosphatase family protein [Streptomyces clavuligerus ATCC 27064] Length = 310 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 61/306 (19%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL +P A A R+++WNI +++ R + +YA Sbjct: 39 ALFARSLPVEAPRDAVPNRVMTWNICN-------PCKESNASRA----AEIARYA----P 83 Query: 67 DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAI---AVRKKN 120 ++ LQE + + + +++ ++ H R A+ Sbjct: 84 QVIGLQEACVRDVEWIRQYLKSRYGLVYHVEYGTVLQHQGRCGGLPWRPGAFGQALLSAA 143 Query: 121 VRVLQQS--YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +S YP G++D R + + + G+ + V + HL Sbjct: 144 PMTDHESVEYPDGGSED-------RGYMAVTTTVGGRSVRVFNTHL---------AQRRQ 187 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + Q + L + + + + ++ GDFN N W + ++ P Sbjct: 188 EAVR--ADQTRVLAAAVARHERA----IVLGDFNAVPNAPELTR-IW-ELSADEKSPCGP 239 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-----DIKSRGKR-- 291 + C + + + DY + A ++ Y++ D+ + G Sbjct: 240 SSA-ADCEPTTDWQ--LTFDYIFLRGMAP---VEHGVHLTSYSDHHLVHTDVGAPGPTRP 293 Query: 292 LSDHCP 297 +S H P Sbjct: 294 VSTHAP 299 >gi|269968311|ref|ZP_06182334.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] gi|269827084|gb|EEZ81395.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] Length = 442 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 101/292 (34%), Gaps = 44/292 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L+ ++ + R Y L+ Q+ K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWALT-----AIASHIGDR----YELIPQHVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + +N +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKEGVN------IHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ V H SF + E +Q + L + Sbjct: 279 DKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRALAQSLKIP 330 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF--PKEKDSRCNANKNL----- 251 V + GDFN ++ ++ + N S I +S + N Sbjct: 331 SSETVVYS--GDFNVNKRKFPSD---YQQMIANLSAIEPHYSGYTESTFDPRINNFAGEA 385 Query: 252 ----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 386 LSGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVS 437 >gi|229183010|ref|ZP_04310242.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1] gi|228600467|gb|EEK58055.1| Sphingomyelinase C [Bacillus cereus BGSC 6E1] Length = 338 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 119/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 34 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 87 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 88 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 147 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 148 QYVFANGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 200 Query: 185 SQQAQWLKDWITQKKESLVPFVIAG-DFNRK-INYLGNNDD----FWKTI-------DPN 231 + Q + ++D+I K +V+ G D N IN N+D +KT+ + Sbjct: 201 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 260 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + + Sbjct: 261 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKY 320 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y++ SDH P+ Sbjct: 321 TYDDY---------SDHYPVEATISM 337 >gi|152965406|ref|YP_001361190.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359923|gb|ABS02926.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 291 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 107/321 (33%), Gaps = 61/321 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + T + +R+++WN+ + + R + +L D+V LQ Sbjct: 1 MSTPTPAPGAPLRVMTWNLWW--------RFGDWRARREAILAVLA----QERPDVVGLQ 48 Query: 73 EM---GSYNAVAKVFPKNTWCIFYSTERLINHSKR---------DSNNDIHTAIAVRKKN 120 E+ N + + + +S +R + + AV ++ Sbjct: 49 EVWADEGENLAQWLGERLGMHVAWSPSPAPQRWRRRLAWNGEDPAVVDGLQFGNAVLSRH 108 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + Q+ L G D R A+++LV+ + + HL S ++ Sbjct: 109 PLLDQEVRELPGGGDEDE---GRTALKVLVDAPRRPLPFTTTHLNSSPAESAVRV----- 160 Query: 181 CSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNR-------KIN--YLGNND------- 222 +Q + L ++ + V+ GDFN ++ YL Sbjct: 161 -----EQVRALVPFVVGGHRRGEHYPPVLTGDFNAVAESDELRLAGGYLTPGPVPGVVLV 215 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 D W+ P+D F ++ + + + ID+ ++ F + S ++ Sbjct: 216 DSWRFAAPDDPG--FTWDRRNPF-VARVHQPSARIDHVLVG--LPPFTGEGSVRDVRLVA 270 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 + G SDH + +D + Sbjct: 271 TE-PVGGVWASDHAAVVVDLE 290 >gi|228983878|ref|ZP_04144072.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775857|gb|EEM24229.1| Sphingomyelinase C [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 338 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 113/311 (36%), Gaps = 45/311 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D++ L E+ +A ++ Sbjct: 42 LKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVIILNEVFDNSASDRL 95 Query: 84 FP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 N + + ++ + + D AI + + +Q + Sbjct: 96 LGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIIEKIQYVFAQGC 155 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ S G V ++ N + V+ HL++ DS+ SP+ S+ + Q + ++ Sbjct: 156 GPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQ 208 Query: 193 DWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRC 245 D+I K +V+ GD N IN N+D +KT+ + D+ Sbjct: 209 DFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATT 268 Query: 246 NANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-LS 293 N+ +DY + ++ K L +S + +K S Sbjct: 269 NSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTV--TSWLKKYTYNDYS 326 Query: 294 DHCPISIDYDF 304 DH P+ Sbjct: 327 DHYPVEATISM 337 >gi|24214114|ref|NP_711595.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] gi|24195001|gb|AAN48613.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] Length = 360 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 37/216 (17%) Query: 23 KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 K++++ WN+ L+ S + + Y + D D++ Q Sbjct: 51 KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVADYIHSEDPDVILFQ 110 Query: 73 EMGS-------YNAVAKVFP--KNTW----CIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 E+ + + ++ + + FY + H K + + A + K Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ S PL+ A ++ +RA+ +L +E G K VL+ HL +F Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIE-GGDKFTVLNTHLDAFSQGTD---- 225 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + +Q + + + + + +V+ GDFN Sbjct: 226 ------TMHRQVETITGLLKELDLAGHYWVLGGDFN 255 >gi|229159752|ref|ZP_04287760.1| Sphingomyelinase C [Bacillus cereus R309803] gi|228623689|gb|EEK80507.1| Sphingomyelinase C [Bacillus cereus R309803] Length = 333 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 111/317 (35%), Gaps = 41/317 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + DIV L E+ Sbjct: 29 TSTNQNDTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDIVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ + + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKRDDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V+ GD N IN ++D +K + + Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVVFGGDMNVNKINAENDSDSEYASMFKILHASIPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVM--DQNAYKFLIQESFSEILYN---EDDIKSR 288 D+ N+ +DY + D F+ + K Sbjct: 256 TATWDATTNSIAKYNYPDAPAEHLDYIIASKDHANPSFVENKVLQVKSPKWSVTSWFKKY 315 Query: 289 GK-RLSDHCPISIDYDF 304 SDH P+ Sbjct: 316 TYDDYSDHYPVEATISM 332 >gi|313682984|ref|YP_004060722.1| endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] gi|313155844|gb|ADR34522.1| Endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] Length = 335 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 79/241 (32%), Gaps = 43/241 (17%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYTLL-- 57 L + + +V++ ++N+ L +E E + L Sbjct: 2 RILFLLALILSFLGGVEVKIATYNVENLFDMHYDGTEYEEYIPNGDWGWTNEMYRAKLIN 61 Query: 58 -RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA- 115 + + ADI+ LQE+ S +A+ + L R + A A Sbjct: 62 TATVIRGIGADIIGLQEIESESAL---------------KDLKAEINRQGLYYPYYAFAK 106 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 R V V L YP+ A R +E + I K + V H KS Sbjct: 107 TRNSAVNVALLSRYPIQSALKHPVNYSGKYRDILEAKILIEEKPLRVFVNHWKS----KG 162 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + C+ Q L + P+V+ GDFN ++ + F K+ N+ Sbjct: 163 GPESERIVCAKRLLQR--LNE-----LPEDEPYVLVGDFN---SHYEEHKTFLKSRKHNN 212 Query: 233 S 233 + Sbjct: 213 T 213 >gi|229154378|ref|ZP_04282498.1| Sphingomyelinase C [Bacillus cereus ATCC 4342] gi|228629202|gb|EEK85909.1| Sphingomyelinase C [Bacillus cereus ATCC 4342] Length = 338 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 113/311 (36%), Gaps = 45/311 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D++ L E+ +A ++ Sbjct: 42 LKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVIILNEVFDNSASDRL 95 Query: 84 FP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 N + + ++ + + D AI + + +Q + Sbjct: 96 LGNLKREYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIIEKIQYVFAQGC 155 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D+ S G V ++ N + V+ HL++ DS+ SP+ S+ + Q + ++ Sbjct: 156 GPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQ 208 Query: 193 DWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRC 245 D+I K +V+ GD N IN N+D +KT+ + D+ Sbjct: 209 DFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATT 268 Query: 246 NANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGKR-LS 293 N+ +DY + ++ K L +S + +K S Sbjct: 269 NSIAKYNFPDSPAEYLDYIISSKDHANPSFIENKVLQPKSPQWTV--TSWLKKYTYNDYS 326 Query: 294 DHCPISIDYDF 304 DH P+ Sbjct: 327 DHYPVEATISM 337 >gi|130079|sp|P11889|PHL2_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|580758|emb|CAA31214.1| presphingomyelinase (AA -27 to 306) [Bacillus cereus] Length = 333 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 115/303 (37%), Gaps = 50/303 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPN------- 231 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + F + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKY 315 Query: 279 LYN 281 YN Sbjct: 316 TYN 318 >gi|295094002|emb|CBK83093.1| Metal-dependent hydrolase [Coprococcus sp. ART55/1] Length = 367 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 111/333 (33%), Gaps = 72/333 (21%) Query: 17 TASVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 + SV + +V+WN+ S G S++ ++ K+ + + +L ADI Sbjct: 61 SPSVGDSISIVTWNLGYGSLGANADFFMDGGDSVYTSTAKQVNDNMEAITSELNSLAADI 120 Query: 69 VFLQEMGSYNAVAKVFPKNT----------------WCIFYSTERLINHSKRDSNNDIHT 112 LQE+ ++ + + + L + S Sbjct: 121 FLLQEVDERSSRSHKINEADILREKLPSYTSSYAYNYKTLMVPYPLPPIGRVTSGIMTLC 180 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + V + +Q P + + + + ++ ++++HL++ DS Sbjct: 181 SFEV--SDAERIQLPCPFSYPIRLCNLKRCLIVSRIPIAGSEHELVIVNLHLEA---YDS 235 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKI------NYLGNNDDFW 225 E + Q + L D I Q + + +VIA GDFN+ Y + D W Sbjct: 236 GEGKAA--------QTRMLAD-ILQNEAAAGNYVIAGGDFNQTFSNVDLSAYPQQSADLW 286 Query: 226 K-----TIDPNDSLIRFPKEKDSRCNA---------NKNLRNKIPIDYFVMDQNAYKFLI 271 + DS I C + +++ + ID F++ N Sbjct: 287 APGSIDVSEFGDSFICSTDSSAPTCRSLDKPYEGSDHESFQY-YVIDGFIVSSN------ 339 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + N + + + SDH PI +D Sbjct: 340 ------LQINSTETINLDFKNSDHNPIRLDVAL 366 >gi|327541485|gb|EGF28020.1| Endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47] Length = 358 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 91/273 (33%), Gaps = 78/273 (28%) Query: 5 YVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLW------KNSVKRTTSD 53 ++LAL + + SVA + +++WN+ + + K++ R D Sbjct: 15 FLLALTWHFISGFGSVAIAQQPAEFSVMTWNLEWFFDNQTADNPSELGREKSAPSRGQWD 74 Query: 54 Y--TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + + + +V LQE+ S N + F + NH + + I Sbjct: 75 WRRDRVAAAIAKVQPTVVALQEIESQNVM----------YFLTRAIDRNHGLKYDDYVI- 123 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE------------------LLVEIN 153 K +Q LL + ++ +R V + + +N Sbjct: 124 ------KGEDFYTEQDVALLATTTTGVQSISRGVVTPSMKSRGYASVSKHLFAVVEIPVN 177 Query: 154 GKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT----------QKKES 201 GK + + + HL++ L ++QA+ L W+ + + Sbjct: 178 GKTELLVIANCHLRAMAEKGELR----------AKQARTLGLWLERMVAGVKASQENPDQ 227 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 V ++ GDFN ++ I P+ L Sbjct: 228 PVHVLVTGDFN--------TEELAGKISPDSDL 252 >gi|78066588|ref|YP_369357.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77967333|gb|ABB08713.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 284 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 109/316 (34%), Gaps = 70/316 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +G + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGAV----DLPRTVAAIRALGDF------DVLCLQEVTRGFGALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + I + + + + AIA R RVL+Q P Sbjct: 51 RPGADQFAELAALLPG--YAIVEAIGADLPPIETGAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSL 183 D+ + + R A+++ ++ + V+ HL+ + +D+L + + +C+ Sbjct: 109 WPA--DAGAPSMPRIALDVELQAPFGPLRVVTTHLEYYSARQRLAQVDALRDRHREACAH 166 Query: 184 LSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 ++ A + + PF ++ GDFN + ++P Sbjct: 167 AARPAPA--------ETAEGPFSATGQPCDAIVCGDFNSAFGSEAYR----RFMEPIADA 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------ 288 RF +R D ++ + ++ D + R Sbjct: 215 PRFVDAWVARHPGRTPPPTAGVYDTV-------QWSEGPLACDFVFVTDTLLPRVTRCEI 267 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 268 DGDVRASDHQPVLLEL 283 >gi|330009934|ref|ZP_08306655.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp. MS 92-3] gi|328534648|gb|EGF61218.1| endonuclease/exonuclease/phosphatase family protein [Klebsiella sp. MS 92-3] Length = 253 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 81/262 (30%), Gaps = 55/262 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR +++ ADIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + R + ++ +G I V+ +HL Sbjct: 93 HHGNAVLSRFPIEYYENRDISV-------GNGEKRGLLYCRIVPPRSGITIHVICVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + Q L +W+ P V+AGDFN D + Sbjct: 144 GLRADQRQ-----------AQLTMLAEWVNPLPA-GEPVVVAGDFN---------DWRQQ 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 P +R + P +D + + + Sbjct: 183 ANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQ----- 237 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S++ Sbjct: 238 ------WRHLSDHAPLSVEIHL 253 >gi|315185421|gb|EFU19193.1| Endonuclease/exonuclease/phosphatase [Spirochaeta thermophila DSM 6578] Length = 311 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 72/195 (36%), Gaps = 24/195 (12%) Query: 26 LVSWNINTL--SEQEGVSLWKNSVKR--TTSD----YTLLRQYAKNLDADIVFLQEMGSY 77 + ++N+ L + ++G + T + + ++LDAD++ LQE+ + Sbjct: 25 VATYNVENLFDAVEDGAEYDEFRPSSFWTEEKVLVRLEAVSRVVRSLDADVLILQEVENE 84 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + ++ + + H + +H A+ R V + Sbjct: 85 RVLGRLVSG-----YLADAGYRWHFLPEEEGAVHVAVLSRIPVEGVRVHALKDPRV---- 135 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R VE+ + G+++++ +HL S + L A+ L++ + Sbjct: 136 --AVLRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRN---QLFLIARRLEE--IR 188 Query: 198 KKESLVPFVIAGDFN 212 + ++ GDFN Sbjct: 189 RTAPGAHVLVGGDFN 203 >gi|32471949|ref|NP_864943.1| hypothetical protein RB2435 [Rhodopirellula baltica SH 1] gi|32397321|emb|CAD72627.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 358 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 89/256 (34%), Gaps = 44/256 (17%) Query: 5 YVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLW------KNSVKRTTSD 53 ++LAL + SVA + +++WN+ + + K++ R D Sbjct: 15 FLLALTGHFISGFGSVAIAQQPTEFSVMTWNLEWFFDNQTADNPSELGREKSAPSRGQWD 74 Query: 54 Y--TLLRQYAKNLDADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKR 104 + + + +V LQE+ S N A+ + E Sbjct: 75 WRRDRVAAAIAKVQPTVVALQEIESQNVTYFLTRAIDRNHGLKYDDYVIKGEDFYTEQDV 134 Query: 105 DSNNDIHTAI-AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK--IWVLD 161 T + ++ + V P + ++ S + + AV + + +NGK + + + Sbjct: 135 ALLATTTTGVQSISRGVVT------PSMKSRGYASVSKHLFAV-VEIPVNGKTELLVIAN 187 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYL 218 HL++ + + + L + L + +E+ V ++ GDFN Sbjct: 188 CHLRA---MAKKGDLRAKQARTLGLWLERLVAGVKASQENPDQPVHVLVTGDFN------ 238 Query: 219 GNNDDFWKTIDPNDSL 234 ++ I P+ L Sbjct: 239 --TEELAGKISPDSDL 252 >gi|320335581|ref|YP_004172292.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319756870|gb|ADV68627.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 309 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 93/294 (31%), Gaps = 72/294 (24%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP + ++ RL+++NI R T L + + D+V LQE Sbjct: 83 VPSPSPGSRSFRLMTYNIA----------------RGTGGAAELARVISRAEPDVVCLQE 126 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + V P + RL ++ A R + V VL +P+ G Sbjct: 127 TNT------VLPGVLRDL---ERRLPGYA------------AARSREVVVLS-RFPVTGV 164 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +D RR + V + G+ + +L++H + + + Q + + Sbjct: 165 QDRALPDTTRRLLRATVRVRGQPVTLLNLHFTTVLWRGGWAGARDRR----AAQVRAVLQ 220 Query: 194 WITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 ++ P V GDFN R + + F + + + Sbjct: 221 --VARQTRG-PVVACGDFNTPPRGLVDAALREQFSNAFAQAGAGFGYTFPARAP------ 271 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ID+ +L + S R SDH P+ +D Sbjct: 272 ---LVRIDHV--------WLRRASAVAAF-------VPDARASDHRPLVVDVTL 307 >gi|298375899|ref|ZP_06985855.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266936|gb|EFI08593.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 287 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 55/320 (17%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + WK D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKF-----RRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K +AD+ QE+ + + + + +V Sbjct: 54 ADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN 175 K L + +G K + +L + N GKK + L+ HL + Sbjct: 114 DKSGNFWLAEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 SL+ +QA+ L +P ++ GDFN + +++ +P+D Sbjct: 169 ARHEGASLVLEQAKKLS--------ENLPIIVTGDFN----AVPSDEPIQVLTNPSDPRH 216 Query: 236 RFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKF---LIQESFSEILYNE 282 + + IDY + N ++ E+ + + Sbjct: 217 LTHSRTIAGFIYGPEWTFHDFGKIPYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFP-- 274 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDHCP+ Sbjct: 275 ----------SDHCPVISTL 284 >gi|206977785|ref|ZP_03238675.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97] gi|206743982|gb|EDZ55399.1| sphingomyelin phosphodiesterase C [Bacillus cereus H3081.97] Length = 333 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 120/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIAG-DFNRK-INYLGNNDD----FWKTI-------DPN 231 + Q + ++D+I K +V+ G D N IN N+D +KT+ + Sbjct: 196 TNQLKEIQDFIENKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ ++ + ++ + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKILQPKSPQWTVTSWLKKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y++ SDH P++ Sbjct: 316 TYDDY---------SDHYPVAATISM 332 >gi|260220365|emb|CBA27833.1| hypothetical protein Csp_A04240 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 284 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 101/303 (33%), Gaps = 68/303 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + + +R+V++NI+ ++R L + +DAD++ LQE+ Sbjct: 30 PSGGARMKTLRVVTYNIH------KGVQGLGPLRRLE--IHNLSHAMELMDADVLCLQEV 81 Query: 75 GSY-NAVAKVFP------------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 A+ FP + + Y T + H + + A+ + V Sbjct: 82 RKLHQREARHFPHWPQAPQADYLAPSGYEAIYRTNAITRHGEHGN------ALLSKWPVV 135 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + R R + + +++ G+ + VL +HL L Sbjct: 136 QHQHEDMSD-------HRLEQRGLLHVELDVAGQSLHVLVVHL-------GLIRAGRG-- 179 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 +Q Q L +I ++ P ++AGDFN + + P K Sbjct: 180 ----RQLQQLTQFIQREIPPDAPLLVAGDFNDLPA------WVARQLAPAGLKAPVTK-- 227 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 C + + +D+ + + + + + R+SDH P+ + Sbjct: 228 --PCVTFPSRLPLVQLDHVLA--RGLTPVSATAPRGMSW---------ARMSDHLPLITE 274 Query: 302 YDF 304 + Sbjct: 275 WQL 277 >gi|163760748|ref|ZP_02167828.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] gi|162282070|gb|EDQ32361.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] Length = 368 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 121/368 (32%), Gaps = 88/368 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTS----DYTLLRQY------------------ 60 VR+ ++N L + S ++N +++ D++ QY Sbjct: 2 TVRIATFNAENLLSRFDFSGFRNELRQDRVAQLYDFSSEEQYRQAEIARAVSLTDDTRQM 61 Query: 61 ----AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA- 115 DADI+ LQE+ + + + + + + + + D N+ +A Sbjct: 62 TALAIAEADADILCLQEVENLDTLHRF--EYGYLFKMIGDGYRHKVLIDGNDSRGINLAL 119 Query: 116 ---------VRKKNVRVLQQSYPLLGAKDSFSRAG-----------NRRAVELLVEINGK 155 + + + V ++ A +S R +E+ V+I K Sbjct: 120 MARERTLDGAKIEILEVTSHAHLTYDAAGLYSPDLEGMAHPNDKLFKRDCLEVDVKIGPK 179 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFN 212 ++ + +H KS + + + + + +A+ ++ I+ + +VIAGDFN Sbjct: 180 RLTLYVVHFKSMGSPRNGLDGRTHTMPVRVAEARAVRKLISDRFGADGGGKRYVIAGDFN 239 Query: 213 ------------RKINYLGN---NDDFWKTIDPNDSL----IRFPKEKDSRCNANKNLRN 253 R + D + + + R P+ + + Sbjct: 240 DYSEKLVITGDRRHGYHFTPEQAEDGAVRVLTADGFAENVVTRRPEMDRWTLYHTRGPQE 299 Query: 254 KIP--IDYFVMDQ--------NAYKFLIQESFSEILYNE-DDIKSR------GKRLSDHC 296 + +DY + + L+ + +++ + SDHC Sbjct: 300 RHLCQLDYLLASPALTRSNRDRLPDIIRAGQPWRTLFPQGQEVERYPRTGWDRPKASDHC 359 Query: 297 PISIDYDF 304 P+++ +D Sbjct: 360 PVAMTFDM 367 >gi|464373|sp|P33377|PHL3_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|142674|gb|AAA91820.1| cerB [Bacillus cereus] Length = 333 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 104/275 (37%), Gaps = 35/275 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLFGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGH 255 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYK 268 D+ N+ +DY + ++ Sbjct: 256 TATWDATTNSIAKYNFPDSLAEYLDYIIASKDHAN 290 >gi|330811892|ref|YP_004356354.1| hypothetical protein PSEBR_a4928 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380000|gb|AEA71350.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 97/331 (29%), Gaps = 63/331 (19%) Query: 14 VPCTASVA-----QKVRLVSWNINTLSE------QEGVSLWKNSVKRTTSDYTL--LRQY 60 V CTA+ A Q +++++WN+ L+ + S ++L + + Sbjct: 38 VSCTANAAPLAPGQALKVMTWNVQFLAGKRYVFWHDLAQGNDESPTLEDMAFSLDEVARV 97 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----- 115 ++ D+V LQE+ K + S D Sbjct: 98 IRDEQPDVVLLQELDKGA---KASDYQDQLKLLQERLADLYPCGTSAFDWKADFVPDPHI 154 Query: 116 -----------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162 R + + P+ + + A+ + G ++ VL+ Sbjct: 155 FGSVGRQLATLSRYRIDHAERVQLPVADTNIISRQFQPKNALLVSYLPLSGGGQLAVLNT 214 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKI 215 HL+ D L +Q + + + + + P++I GDFN R++ Sbjct: 215 HLERATEPDE----------TLPRQITAVAKALDKFESAGTPWLIGGDFNLLPLGQYRRL 264 Query: 216 NYLGNNDDFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + L P ++ ++ P D + + Sbjct: 265 PTEQR-----TPYSADSPLHLLWDKYPMIPTNNEASGIDREHWLTHYPNDPGLNGPDRTV 319 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + S + R+SDH P+ Sbjct: 320 DYLFYSPRLKRVEAQVRQDDTLRISDHLPVI 350 >gi|260664810|ref|ZP_05865661.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii SJ-7A-US] gi|260561293|gb|EEX27266.1| endonuclease/exonuclease/phosphatase [Lactobacillus jensenii SJ-7A-US] Length = 291 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 80/276 (28%), Gaps = 53/276 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K + D F QE+ + + + F N + + + S + + + A + + Sbjct: 36 IKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAENAFDDMGSSFAQNFHSAYIAFPLNNPH 93 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV-----------------EINGKKIWVLDIH 163 L S + V + N K++ +++ H Sbjct: 94 GFARS-GILALSKYHIDSSERRKYFVSSSLIEKFVDLDRCFNVMRLPVKNDKELVLINSH 152 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---- 219 + + + + +Q L + + + + GDFN Sbjct: 153 MSA--YDKGGLSK--------KKQLALLNHVMKAEIQKGNYVICGGDFNHAFGTKYVAHF 202 Query: 220 -----NNDDFWKTIDPN--DSLIRFPKEKDS----RCNANKNLRNKIPIDYFVMDQNAYK 268 +D + S +R +++ C + K ++D Sbjct: 203 KSEQKQHDWLAVLSQKDLASSGMRMITAQNADDVPTCRGSDIPYKKGVTYTTIVDG---- 258 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 FL+ + + YN D + DH P+ + + Sbjct: 259 FLVSPNVQAVSYNIDTQFAYA----DHNPVKLSFSL 290 >gi|320158919|ref|YP_004191297.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] gi|319934231|gb|ADV89094.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] Length = 442 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 95/295 (32%), Gaps = 44/295 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++++++NI L ++ + +R + L+ Y K D++ LQE+ +A Sbjct: 176 QHLKIMTYNIWAL-----PAIASHIGER----FELIPDYVKGY--DVLALQEVFANGRDA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + K + + +I I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNIFDGGVIIVSRYPIVNQAQFIFPDCTGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H + D+ + +Q + L Sbjct: 276 CFADKGVNYAEVIK---GGEAYHVFATH-TASYDTDTARDYRQRQ----FKQMRALAQ-- 325 Query: 196 TQKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCNA 247 + K + V +GDFN + G+ + + P+ + Sbjct: 326 SLKIPANETVVYSGDFNVNKRKFPGDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEP 385 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N +DY ++ + +I + + + LSDH P+S Sbjct: 386 LSGGENVEYLDYVMVSNEYAVKGDNNNRVDIPRSTAESLWKHYNLSDHFPVSTVL 440 >gi|150396373|ref|YP_001326840.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] gi|150027888|gb|ABR60005.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] Length = 263 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L + K + DI LQE+ S + Sbjct: 1 MKIATWNIN------------GVKAR----LDGLVGWLKESNPDIACLQEIKSIDDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A + L+ G S +R Sbjct: 42 FPRGE-------IESLGYHVETHGQKGFNGVA----LLSKLRPDEVNRGLPGDASDEQSR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + +NG + V ++L + +++ + Y + + L + Q+ Sbjct: 91 F-IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLMLEE 143 Query: 204 PFVIAGDFN--------------RKIN-YLGNNDDFWKTIDPN--DSLIRFPKEKD---- 242 P ++AGD+N R YL ++ + +R ++ Sbjct: 144 PLILAGDYNVIPEPHDCWDVKVWRNDALYLPETRAAFRRLRNLGFTDAVRATSDEAPLYS 203 Query: 243 -----SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + C I ID+ ++ A L+ S + + ++ SDH P Sbjct: 204 FWDYQAGCWPK---NLGIRIDHLMLSPEAADKLVSTSIEKHV-------RSWEKPSDHVP 253 Query: 298 ISIDYDF 304 ++ ++ F Sbjct: 254 VTAEFAF 260 >gi|47568807|ref|ZP_00239501.1| phospholipase c precursor [Bacillus cereus G9241] gi|47554483|gb|EAL12840.1| phospholipase c precursor [Bacillus cereus G9241] Length = 378 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 45/319 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 128 DNSASDRLLGNLKQEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 188 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 240 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-F 237 + Q + ++D+I K +V+ GD N IN N+D +KT+ + Sbjct: 241 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 300 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIK 286 D+ N+ +DY V ++ K L +S + +K Sbjct: 301 TATWDATTNSIAKYNFPDSPAEYLDYIVASKDHANPSFIENKVLQPKSPQWTV--TSWLK 358 Query: 287 SRGKR-LSDHCPISIDYDF 304 SDH P+ Sbjct: 359 KYTYNDYSDHYPVEATISM 377 >gi|301104252|ref|XP_002901211.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101145|gb|EEY59197.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 374 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 96/328 (29%), Gaps = 63/328 (19%) Query: 19 SVAQKVRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVF 70 + ++++ ++N L + + +T +D + K LDADI+ Sbjct: 65 TSTSQLKVTTFNTEFLFLGNAPHGLKCPGADCRWKTVADAQSHVIQIASVIKKLDADIIQ 124 Query: 71 LQEMGSYNAVAKVF------PKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNV 121 L E+ + V +T+ + + +S + D + + Sbjct: 125 LNEVEDCTVLQAVIAQLQALGDSTYKPYVVRGADTSTGQNSALLTRIDPVVDVQRTETRA 184 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSP 179 + + S G + + G K + ++ HL + P Sbjct: 185 TIPVSGSKCPSSSGYSSSKGVTKHFYTTFNVTGFSKPLTLVGAHLLA-------NPESKP 237 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS------ 233 C QA L + +I GD N D +D N + Sbjct: 238 RCFEREAQATVLAGLANAAVDEGHHAIITGDLN---------DWSATVLDKNSNTPISAV 288 Query: 234 LIRFPKEKDSRCNANKNLRNK------------------IPIDYFVMDQNAYKFLIQESF 275 L + + ++ +D+ ++ ++ L SF Sbjct: 289 LSILTGSNFVDVASKISQSDRYTQWWDEDNNCVFEDSEVSSLDHMLVSKSLSSALKSVSF 348 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYD 303 + LY G SDH PIS+ + Sbjct: 349 NHDLYASS---CSGYN-SDHYPISVVLN 372 >gi|262383745|ref|ZP_06076881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294643|gb|EEY82575.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 287 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 55/320 (17%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + WK D+ Sbjct: 1 MKRILLCLMVVLFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKF-----RRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K +AD+ QE+ + + + + +V Sbjct: 54 ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN 175 K L + +G K + +L + N GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 SL+ +QA+ L +P ++ GDFN + +++ +P+D Sbjct: 169 ARHEGASLVLEQAKKLS--------ENLPIIVTGDFN----AVPSDEPIQVLTNPSDPRH 216 Query: 236 RFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKF---LIQESFSEILYNE 282 + + IDY + N ++ E+ + + Sbjct: 217 LTHSRTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFP-- 274 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDHCP+ Sbjct: 275 ----------SDHCPVISTL 284 >gi|130078|sp|P09599|PHL1_BACCE RecName: Full=Sphingomyelinase C; Short=SMase; AltName: Full=Cereolysin B; AltName: Full=SMPLC; AltName: Full=Sphingomyelin phosphodiesterase; Flags: Precursor gi|580755|emb|CAA45503.1| sphingomyelin phosphodiesterase [Bacillus cereus] gi|580761|emb|CAA31333.1| SMase [Bacillus cereus] Length = 333 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 120/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIAG-DFNRK-INYLGNNDD----FWKTI-------DPN 231 + Q + ++D+I K +V+ G D N IN N+D +KT+ + Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 255 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + + Sbjct: 256 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKY 315 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y++ SDH P++ Sbjct: 316 TYDDY---------SDHYPVAATISM 332 >gi|13471192|ref|NP_102761.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] gi|14021936|dbj|BAB48547.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] Length = 264 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 90/308 (29%), Gaps = 74/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN R L + DIV LQE+ V + Sbjct: 1 MKIVTWNIN------------GVRAR----IGNLTHWLTESAPDIVCLQEI---KTVDEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LGAKDSFSR 139 FP I + + + + + L D+ + Sbjct: 42 FP----------RAEIEALGYNVETNGQKGF---NGVALLSKLRFDEVIRGLPGDDTDEQ 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A V + + V ++L + + + L+ A+ L+ W ++ Sbjct: 89 ARFIEGV---FSTDKGALRVASLYLPNG----NPIDDEKKFPYKLNWMAR-LERWAEERL 140 Query: 200 ESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNAN 248 + V+AGD+N I+ + + + F + + +A Sbjct: 141 KLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAP 200 Query: 249 KNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ID+ ++ A S + + ++ SDH Sbjct: 201 DTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHV 253 Query: 297 PISIDYDF 304 P++ID Sbjct: 254 PVAIDLAL 261 >gi|284992404|ref|YP_003410958.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065649|gb|ADB76587.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 271 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 98/295 (33%), Gaps = 61/295 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76 VRLV++N + ++ + R L DAD++ LQE+ S Sbjct: 19 PVRLVTFN----THHGVGDDGRHDLPR-------LATVLAAADADLICLQEVDRHFGGRS 67 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + I+ +RD A+ + ++ +PL G+ Sbjct: 68 EDVDQALLLSRALDMQLAWGPAIDEPRRDEGLRRQYGNALLSRLPVLISDVHPLPGS--- 124 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A+ +VE++G +WV HL S C + +Q + T Sbjct: 125 ---GEPRSALRTMVELDGAALWVTTTHL-STCSPEERA-----------EQIAAIAQLHT 169 Query: 197 QKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + E+ V+ GDFN ++ + + + RF + + + Sbjct: 170 EPMETG---VLVGDFNADPRAPELARLTGRFTDAWELAPDREDRAGWRFWQARRGGTHPA 226 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + ID + + + G SDH P+ +D + Sbjct: 227 RRPHRR--IDQVWVSPG-----------VGVSRAHVLDGAGA--SDHLPLVVDLE 266 >gi|78045838|ref|YP_362013.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034268|emb|CAJ21913.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 572 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 102/344 (29%), Gaps = 70/344 (20%) Query: 8 ALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQ 59 L +P + +R+ S+N+ G + + RT + L + Sbjct: 252 VLSPLTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAK 311 Query: 60 YAKN---LDADIVFLQEMGS-----YNAVAKVFP-------KNTWCIFYSTERLINHSKR 104 LDAD+ L E+ + AV+++ W + Sbjct: 312 LVATIVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPG----- 366 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIH 163 ++ I I R V + + L G ++ SR +A G V+ H Sbjct: 367 --DDAIRVGILYRSSQVTPVGKPATLTGGPFENHSRVPLAQAFR---SARGATFVVVANH 421 Query: 164 LKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN--- 212 KS C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 422 FKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYA 481 Query: 213 -----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 R + G D + R +D+ ++ Sbjct: 482 MEMPMRSLRASGWQDA-FAVAGVKQPYSYVYDGLSGR------------LDHALLSPAMA 528 Query: 268 KFLIQESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 K L + I + D K R SDH P+ + + Sbjct: 529 KQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|91227580|ref|ZP_01261884.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] gi|91188473|gb|EAS74766.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] Length = 442 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 99/291 (34%), Gaps = 42/291 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYN 78 Q ++L+++NI L+ ++ + R Y L+ Q+ K D++ LQE+ G Sbjct: 176 QNLKLMTYNIWALT-----AIASHIGDR----YELIPQHVKGY--DVLALQEVFASGREA 224 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + + + +N +D I R V Q +P D F+ Sbjct: 225 FLRELAKEYPYQTKMLDKEGVN------IHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFA 278 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G A + G+ V H SF + E +Q + L + Sbjct: 279 DKGVNYAEIIK---GGQAYHVFATHTASFDTDTAREYRQRQ-----FKQIRTLAQSLDIP 330 Query: 199 KESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 V + GDFN + G+ + + + +S + N Sbjct: 331 SSETVVYS--GDFNVNKRKFPGDYQQMIANLSAIEP--HYSGYTESTFDPRINNFAGEAL 386 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + LSDH P+S Sbjct: 387 SGGENVEYLDYVMVSSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVS 437 >gi|42779823|ref|NP_977070.1| sphingomyelinase C [Bacillus cereus ATCC 10987] gi|42735740|gb|AAS39678.1| sphingomyelinase C [Bacillus cereus ATCC 10987] Length = 378 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 120/326 (36%), Gaps = 59/326 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 74 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 127 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 128 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 187 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 188 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 240 Query: 185 SQQAQWLKDWITQKKESLVPFVIAG-DFNRK-INYLGNNDD----FWKTI-------DPN 231 + Q + ++D+I K +V+ G D N IN N+D +KT+ + Sbjct: 241 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGH 300 Query: 232 DSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + ++ N A+K+ N I+ V+ + ++ + + Sbjct: 301 TATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKY 360 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y++ SDH P++ Sbjct: 361 TYDDY---------SDHYPVAATISM 377 >gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] Length = 380 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 50/382 (13%), Positives = 113/382 (29%), Gaps = 104/382 (27%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKR----------TTSDYTLL--RQYAKNLD----- 65 +R+ ++N L + S WK +R T + + L + + D Sbjct: 2 SLRIATFNAENLMARFDFSGWKREGRRDRSLTLREIETEAQFRALEQARVVSHEDDARQM 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ LQE+ + F +N + + + R N+ +A+ Sbjct: 62 TALAIADCRADIICLQEVEDLATLE-AFERN-YLLPMTGLDYPQKEWRQGNDGRGIDVAI 119 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAG----------------------NRRAVELLVEING 154 + + + K R R +E+ +++ G Sbjct: 120 MAREKTADGEEIEIRSVKSHAGRTMADLEVLTPRLIELGFEKDTRLFRRDCLEVNLKVGG 179 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW------LKDWITQKKESLVPFVIA 208 K V H KS ++ +QA+ ++D ++ + + +++ Sbjct: 180 KHFTVFVAHFKS--MGGPRGGLTGRDFTMPVRQAEAAGVKRIIEDRFGAERAADMRWMVC 237 Query: 209 GDFNR---KINYLGNN------DDFWKTIDPNDSLI--------------------RFPK 239 GD N ++ G+ D + + L+ + Sbjct: 238 GDLNDYAARLAITGDKAAGHSFDWIAEETHGSAPLLDDGFAINLVDRRAQDDRWTLFYAN 297 Query: 240 EKDSRCNANKNLRNKIPI--DYFVMDQNAYK---------FLIQESFSEILYNEDDIKSR 288 K + + + + DY + K + + + + +++ Sbjct: 298 GKSASARLPQERPTRHLVQLDYLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERY 357 Query: 289 ------GKRLSDHCPISIDYDF 304 + SDHCP+ + D Sbjct: 358 PRTGWDRPKASDHCPVVVSLDM 379 >gi|315498086|ref|YP_004086890.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315416098|gb|ADU12739.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 351 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 111/357 (31%), Gaps = 73/357 (20%) Query: 3 RKYVLALVFFLVPCTASVAQK----VRLVSWNINTLSEQEGVSLWKNSVKRT-------- 50 ++L+ +F LV + AQ + ++++N+ + E N Sbjct: 6 TPWLLSGLFSLVVAGGAAAQTADPRLTVMTYNVENFFDAEDDPRMPNGSSNEVVNTPAWV 65 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFP-----KNTWCIFYSTERLINH 101 ++ T + + + D D++ L E+ S ++ + + + N Sbjct: 66 SAKATNVARVIERFDFGRGPDVLVLTEVESQASLEAIKGALNNTGAAYVTAVLLDADPNR 125 Query: 102 SK-RDSNNDIHTAIAVRKKNVRV-LQQSYP--LLGAKDSFSRAGNRRAVELLVE-----I 152 + I A+ + +S+P L D SR G+ L++ Sbjct: 126 PAPKPDQRGIKVALLSKLPLANGFTPKSFPVDLTRTSDCKSRDGSAGTTRDLLQVDLALP 185 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +GK + + HL S C ++ Q + K + AGDFN Sbjct: 186 DGKTLTIFGGHLPSG--------GNPRICREIAAQTIAT---LATKLPQSHVILAAGDFN 234 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--------KNLRNKIPIDYFVMDQ 264 K + + P + D+ C N K I Sbjct: 235 FNCAPDER-----KGLAAAFTGWVLPAQLDNACRGNGSQFYGREKTWSYLDVITQKASGA 289 Query: 265 NAYKFLIQESFSEILYNEDDIK-------------------SRGKRLSDHCPISIDY 302 + + +SF +L + + ++ +G SDH PI+ID Sbjct: 290 SQAWAIDPKSFRTVLTDNEQLQWDDRDQVMRPKAFRFNAETGKGSGTSDHWPIAIDL 346 >gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039965|gb|ACT56761.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] Length = 281 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 99/310 (31%), Gaps = 81/310 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WN+N++ + L + K + DI+ LQE + + K Sbjct: 4 VTVATWNVNSIRAR----------------IHNLAAWIKENNPDIICLQETKTED---KN 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + T + +N+ + +A+ K + ++ D +R Sbjct: 45 FP-------FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF--- 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------- 196 +E IN + + + +++L + S + S WI Sbjct: 95 --IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-------------WIKRFLRFAS 139 Query: 197 QKKESLVPFVIAGDFN-----RKINYLG--NND--------DFWKTIDPN--DSLIRFPK 239 Q+ E P + AGD+N ND ++ + IR Sbjct: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 Query: 240 EKDS--RCN---ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + A+ +NK ID+ ++ A L S D + S Sbjct: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL--HSARI-----DTKPRGWTKPS 252 Query: 294 DHCPISIDYD 303 DH P+ + D Sbjct: 253 DHTPVIVSLD 262 >gi|163759458|ref|ZP_02166543.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] gi|162283055|gb|EDQ33341.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] Length = 260 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 79/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L+ + + D DI LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IENLQAWLRESDPDIACLQEIKS------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + +A+ K++ + + P + Sbjct: 38 VDEGFPRLEL---EALGYHVETHGQKGFNGVAILSKQSPEEVNRGLPGDDTDEQ-----A 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E + + + V+ ++L + +D+ + Y + + L+ + + Sbjct: 90 RF-IEAVFSKDSGVLRVVSLYLPNGNPVDTEKFPYK------LRWMERLQAFAEDRLALE 142 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 P V+AGD+N R++ LG D D ++ Sbjct: 143 EPLVLAGDYNVIPEPVDCHNPKAWEGDALFRPESRTAFRRLENLGFTDALRSANDQAETY 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + N I ID+ ++ A L + + + ++ SD Sbjct: 203 TFW--DYQAGAWPK---NNGIRIDHLMLSPEAADNLEWANVEKHV-------RGWEKPSD 250 Query: 295 HCPISIDYDF 304 H P++I F Sbjct: 251 HVPVAISLGF 260 >gi|45658178|ref|YP_002264.1| hypothetical protein LIC12332 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601420|gb|AAS70901.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 360 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 37/216 (17%) Query: 23 KVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 K++++ WN+ L+ S + + Y + D D++ Q Sbjct: 51 KIKVLVWNVQYLAGKKRIFWYDLPNGDGPDTGPSKEEIEETLKKVAGYIHSEDPDVILFQ 110 Query: 73 EMGS-------YNAVAKVFP--KNTW----CIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 E+ + + ++ + + FY + H K + + A + K Sbjct: 111 ELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVPHPKILGSVGMKLATISKYK 170 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ S PL+ A ++ +RA+ +L +E G K VL+ HL +F Sbjct: 171 ISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIE-GGDKFTVLNTHLDAFSQGTD---- 225 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + +Q + + + + + +V+ GDFN Sbjct: 226 ------TMHRQVETITGLLKELDLAGHYWVLGGDFN 255 >gi|229137476|ref|ZP_04266087.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26] gi|228646034|gb|EEL02257.1| Sphingomyelinase C [Bacillus cereus BDRD-ST26] Length = 338 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 41/309 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A ++ Sbjct: 42 LKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFDNSASDRL 95 Query: 84 FPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + N S+ +A+ K V + Y Sbjct: 96 LGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKVQYVFANGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D+ Sbjct: 156 GPDNLSNKGF-VYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQDF 210 Query: 195 ITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRCNA 247 I K +V+ GD N IN N+D +KT+ + D+ N+ Sbjct: 211 IKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATTNS 270 Query: 248 NKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGK-RLSDH 295 +DY + ++ K L +S + +K SDH Sbjct: 271 IAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTV--TSWLKKYTYDDYSDH 328 Query: 296 CPISIDYDF 304 P++ Sbjct: 329 YPVAATISM 337 >gi|253566723|ref|ZP_04844175.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251944286|gb|EES84775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 99/326 (30%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W R D Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNW-----RYRKDRV 55 Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + D DI+ QE+ + P + + ++A Sbjct: 56 ANAIHF--YDVDILGTQEVLHNQLEDLKLRLP--EYGVVGVGREDGKEKGE------YSA 105 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 + +K VL Y P + + A R A + ++ + K+ + L+ HL Sbjct: 106 LWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL- 164 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 SL+ + L D +P ++ GDFN +D Sbjct: 165 ----DHVGGMARREGISLMLDRVNELSD--------GLPVIVTGDFN----SEPESDVIK 208 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESF 275 D + + S + + IDY + + Sbjct: 209 HVTDSANPEHLTDARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFV---------RNGL 259 Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301 + Y LSDH P+ + Sbjct: 260 KVLRYGILAETENNGFLSDHTPVLVT 285 >gi|222094431|ref|YP_002528490.1| sphingomyelinase c [Bacillus cereus Q1] gi|221238488|gb|ACM11198.1| sphingomyelinase C [Bacillus cereus Q1] Length = 338 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 41/309 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A ++ Sbjct: 42 LKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFDNSASDRL 95 Query: 84 FPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + N S+ +A+ K V + Y Sbjct: 96 LGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKVQYVFANGC 155 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D+ Sbjct: 156 GPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQDF 210 Query: 195 ITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRCNA 247 I K +V+ GD N IN N+D +KT+ + D+ N+ Sbjct: 211 IKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATTNS 270 Query: 248 NKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGK-RLSDH 295 +DY + ++ K L +S + +K SDH Sbjct: 271 IAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTV--TSWLKKYTYDDYSDH 328 Query: 296 CPISIDYDF 304 P++ Sbjct: 329 YPVAATISM 337 >gi|326430099|gb|EGD75669.1| hypothetical protein PTSG_07788 [Salpingoeca sp. ATCC 50818] Length = 709 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 41/200 (20%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79 ++R++SWNIN S +R DY L+ L +D+V LQE+ Sbjct: 77 HELRVLSWNIN---------APSKSRQRLPKDYDTLQGQVTTLRSDVVMLQEVVERQLAD 127 Query: 80 VAKVFPKNTWC------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLG 132 + KV + + YS + + T VRKK ++ V + P Sbjct: 128 LVKVMQDAGFSRCGGVPLVYSGDSIAPSVPPH-----FTLTFVRKKRLQLVAHKRAPFTN 182 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 ++ + + + GK++W+ ++HL++ C Q Q L Sbjct: 183 SRKARDLN----TCTVRCKRTGKEVWLGNVHLET------YRKYAGRRCLQFLQSLQALS 232 Query: 193 DWITQKKESLVPFVIAGDFN 212 + + ++AGD N Sbjct: 233 -----RHDLG---ILAGDMN 244 >gi|16124778|ref|NP_419342.1| hypothetical protein CC_0523 [Caulobacter crescentus CB15] gi|221233494|ref|YP_002515930.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] gi|13421706|gb|AAK22510.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962666|gb|ACL94022.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] Length = 259 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 82/260 (31%), Gaps = 45/260 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMG-------SYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 D + + D+V LQE+ S + ++ + + Sbjct: 22 DVERVAEVIAAERPDVVALQELDVGRARTQSVDQAHRLAELLKMSFHFHPAMAVEEELY- 80 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + I TA+ R+ Q PL R A+ + VE+ G K+ +++ HL Sbjct: 81 -GDAILTAL----PERRIKAQGLPLY---RRVPGLEPRGALWIEVEVGGAKVQIINTHL- 131 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 +QA L +WI + + P V+ GDFN Sbjct: 132 -GLVPQEQ-----------KRQAAALLGPEWIGE-EAWRAPGVLLGDFNATPYSATYR-- 176 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 +T + + + + + ID+ + + + + Sbjct: 177 MLRTALRDAQAPSPAWLRPATATFPSSFPF-MRIDHVFVTKGLETRAVSSPY-------- 227 Query: 284 DIKSRGKRLSDHCPISIDYD 303 +R + SDH P+ ID + Sbjct: 228 --DARARIASDHLPLVIDLE 245 >gi|312113058|ref|YP_004010654.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] gi|311218187|gb|ADP69555.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] Length = 262 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 85/307 (27%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N + +R + L+ D++ LQE+ + Sbjct: 2 LTVATWNVN------------SIKQREIAAVQWLK----RARPDVLCLQEI---KCQTEA 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + ++ +A+ + ++G + +R Sbjct: 43 FPRGAFE-------DLGYNCAVIGQKSFNGVAI----LSKFPIDETVVGLPGDDTDEQSR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---ITQKKE 200 +L G V + N + L + +WL + Sbjct: 92 YIEAVLSLPGGGAFRVASV---------YAPNGNPVASPKLDYKLEWLARFKAHAETLLS 142 Query: 201 SLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDS-------LIRFPKEKDSRCN-ANK 249 PF +AGD+N R I+ + +S L + CN Sbjct: 143 YEEPFALAGDYNIIPRGIDVYNPAAWTEDALYRLESRQAFRRILNLGLADAVEACNSGGG 202 Query: 250 NLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ ++ A+ L D + SDH P Sbjct: 203 QFTFWDYQAGAWQKNLGLRIDHILLSPQAFSRLRSTVI-------DRTPRSWDKPSDHTP 255 Query: 298 ISIDYDF 304 + + Sbjct: 256 VQVTLGM 262 >gi|312881196|ref|ZP_07740994.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309371088|gb|EFP98542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 431 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 103/289 (35%), Gaps = 38/289 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +V +R++++N L + +++ R + ++ Y D+VFLQE+ Sbjct: 160 TTVDDGLRMMTYNTWML---PYIGQERDTRARYIA--EAVKGY------DVVFLQEVFDL 208 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++T S E + K ++++ + + Q + Sbjct: 209 G------NEDTINFLMSEEYVYRSEKLTANDSNTFDGGVLTYSKYPIEFQDQLVFEHCTG 262 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +G++ AV + +GK + +IHL + + Q L+ +I+ Sbjct: 263 TDCSGDKGAVYTKINHSGKAYHLFNIHL--GAWNGDQHRQTRMA------QLGELRVFIS 314 Query: 197 QKK-ESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-------RCNA 247 ++ P ++ GDFN + +Y + + +D D P S N Sbjct: 315 AQQIAEHEPVIVGGDFNIDREHYPEDFQQMLRILDAYDPGESSPFRYSSDPYLNHFSLNN 374 Query: 248 NKNLRNKIPIDYF-VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ++ +DY ++ + K I ++ + LSDH Sbjct: 375 DSTAIDRERLDYVLLLKSTSPKRYINSVLPRRVFTSE--LWGKWELSDH 421 >gi|118395482|ref|XP_001030090.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89284379|gb|EAR82427.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 325 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 99/293 (33%), Gaps = 47/293 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + +++WN+N +++T + Q +++ +IV QE+ +A+ + Sbjct: 61 ISILTWNLN-------------KIEKTQQKHIERICQLIVDINVNIVCFQEVKDADALTQ 107 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + N+ + + + T + + L K Sbjct: 108 ----------MKQKLNKNNQVDEIWDCQYEVTGPGYQGPEITACLYKKKLFKLKAVLYGK 157 Query: 141 G----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R+ L E + + V + HLK S S L ++ L+ Sbjct: 158 QDFEFTRKPQILYFEKDDRIFTVCNFHLKDGSSGKSSLEKLEKEISSLRPFSESLQK--- 214 Query: 197 QKKESLVPFVIA--GDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 K+ PF+I GDFN+ ++ D+ + + + + S +N+N + Sbjct: 215 -DKQDGDPFLILLVGDFNKNLSIAKEGCFDNKRTVL---GTPVDCTMSQKS--KSNQNSK 268 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK-SRGKRLSDHCPISIDYDF 304 D V + K + +I +E +K G +SDH I + Sbjct: 269 YDQIYDQIVAILDKPKEIK---LQQIQIDESSMKLMNGHYISDHLAIGFNIRL 318 >gi|217958262|ref|YP_002336808.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187] gi|217066797|gb|ACJ81047.1| sphingomyelin phosphodiesterase C [Bacillus cereus AH187] Length = 333 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 41/309 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A ++ Sbjct: 37 LKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFDNSASDRL 90 Query: 84 FPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + N S+ +A+ K V + Y Sbjct: 91 LGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKVQYVFANGC 150 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D+ Sbjct: 151 GPDNLSNKGF-VYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQDF 205 Query: 195 ITQKKESLVPFVIA-GDFNRK-INYLGNND----DFWKTIDPNDSLIR-FPKEKDSRCNA 247 I K +V+ GD N IN N+D +KT+ + D+ N+ Sbjct: 206 IKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDATTNS 265 Query: 248 NKNLRNK----IPIDYFVMDQNAY-------KFLIQESFSEILYNEDDIKSRGK-RLSDH 295 +DY + ++ K L +S + +K SDH Sbjct: 266 IAKYNFPDSPAEYLDYIIASKDHANPSFVENKVLQPKSPQWTV--TSWLKKYTYDDYSDH 323 Query: 296 CPISIDYDF 304 P++ Sbjct: 324 YPVAATISM 332 >gi|254444166|ref|ZP_05057642.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198258474|gb|EDY82782.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 307 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 112/308 (36%), Gaps = 32/308 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSV--KRTTSDYTL 56 IR +++ + L T + +R+ ++N+ + + V + S+ T+ Sbjct: 6 IRVLAVSVTWLLASVTCLSQESIETLRVATYNLRNYLAMDRIVEGDFRVNYPKPESEKTV 65 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 +R+ ++ D++ +QE+GS + + + + ++++ A+ Sbjct: 66 VRESILAVEPDLLAIQEIGSEELLL----ELRDDLANEGLVYEGYFLLEADDQTRKIGAL 121 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174 ++V ++ + R +R +EL ++ G+ + + +HLKS D Sbjct: 122 WNGALKVRPIAHTDMSFPFFGDRKKIKRGLLELQLDDFGGEPLSLFVVHLKSRYTSD--- 178 Query: 175 NTYSPSCSLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 S + +A+ +D I ++ S+ F+I GD N + + ++ D Sbjct: 179 KRDPKSARRRTSEAEAARDRILERFPDPSVSRFIIMGDLNDYRHTSSVR----RFLERGD 234 Query: 233 SLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 I +E K IDY + +Y+ ++ Sbjct: 235 VRISVIQEARDESGLIWTHFYKKGGEYSLIDYILCSPG---LEDASEMKSAIYDSENY-- 289 Query: 288 RGKRLSDH 295 + SDH Sbjct: 290 --YQGSDH 295 >gi|312882993|ref|ZP_07742724.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] gi|309369153|gb|EFP96674.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] Length = 441 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 38/287 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++++++NI L + K+ R Y + ++ K D++ LQE+ G + Sbjct: 178 LKVMTYNIWAL-----PVIAKHIGDR----YQEIPKHVKGY--DVLALQEVFAAGRGEFL 226 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + + ++ N D I R V Q +P D F+ Sbjct: 227 RELAKEYPYQTQMLDKKGPN------IYDGGVTIVSRYPIVNQTQFVFPDCTGTDCFADK 280 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 G A + G V H S+ + E +Q + L + Sbjct: 281 GVNYAEIIK---GGVAYHVFATHTASYDTSTAREYRQRQ-----FKQMRQLASTLN--IP 330 Query: 201 SLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIR-FPKEKDSR------CNANKNLR 252 + GDFN + G+ + + + + ++ Sbjct: 331 KNEAVIYGGDFNVNKRKFPGDYQQMLSNLSAIEPSYSGYTESTFDPRVNNFAGKIREDNG 390 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P+S Sbjct: 391 NVEYLDYVMVSNEYLNKSHSDNRVDVPRSTSEGLWKHFNLSDHFPVS 437 >gi|73541781|ref|YP_296301.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72119194|gb|AAZ61457.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 284 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 103/323 (31%), Gaps = 83/323 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + L+SWNI + + + R+ + + DAD++ LQE+ Sbjct: 1 MELISWNIQW----GRGADGRVDLSRSVATMRAMA------DADVICLQEVTRGFGELRG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + ++ + P + + ++ +R + ++ IA R V + + Sbjct: 51 APGADQVSELSALLPG--YRLLFAPGVDRFGSDGGPRQFGNL---IATRLPVHEVFRHAL 105 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P D S R A+E ++ + + V+ HL + + QA Sbjct: 106 PWPADPDVASM--PRVAIEATLQAGSRPLRVICTHL------EYYSAHQRAA------QA 151 Query: 189 QWLKDWITQ----------KKESLVPF---------VIAGDFNRK---INYLGNNDDFWK 226 L+DW + + + PF V+ GDFN K I Y + F Sbjct: 152 NALRDWHAEACGHALRPGRSESTPGPFTPAVRPTEAVLCGDFNSKPDDIAYRRMLEPFDD 211 Query: 227 TIDPNDSLIRFPK---EKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILY 280 P C + P D+ + +N + + + + Sbjct: 212 DTTPWRDAWMHIHPGQSHAPTCAMYDKEQWPEPPFACDFVFVTENLAERVRRCEVNAATK 271 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + SDH PI + D Sbjct: 272 D-----------SDHQPIVLSLD 283 >gi|311696709|gb|ADP99582.1| extracellular nuclease [marine bacterium HP15] Length = 586 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 105/331 (31%), Gaps = 59/331 (17%) Query: 15 PCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADI 68 VR+++ N+ + G + T +++ +Q N D DI Sbjct: 274 APGPRHEASVRIMALNLGNFFNGDGRGGEFPTSRGAGTPAEFRRQQQQLVNTLLAPDPDI 333 Query: 69 VFLQEMG--------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + L E+ S +A+ TW + +D +++I T + R Sbjct: 334 LALTELENDGYGPASSIAELAEALGG-TWRFVSTP-------GQDGDDEIRTGLLYRSD- 384 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLENTY 177 R+ P AK F +G R + + V+ HLKS C +N Sbjct: 385 -RISAVGSPERLAKGPF-ESGGRPPLAQDFGRTDGDATVRVIVPHLKSKSCRGARGDNQD 442 Query: 178 SPS---CSLLSQ--QAQWLKDWI--TQKKESLVPFVIAGDFN-----RKINYLGNNDDFW 225 C + +A+ L W ++ V +I GD N I Sbjct: 443 QADGQGCYASRRTNEAKTLAAWSGSDTRRHYSVGTLIIGDLNSYAREHPIA-------VL 495 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN--KIPIDYFVMDQ-------NAYKFLI-QESF 275 + + F + C K +D+ + + A+ +L+ + Sbjct: 496 EQAGFTSMVHHFYPCTEKTCGHYTYRYRGQKGSLDFALASETLKPRVMGAWSWLVNADEP 555 Query: 276 SEILYNEDDIKSRG--KRLSDHCPISIDYDF 304 + Y D S R SDH P+ +D Sbjct: 556 RVLDYRSDHPASGRGPWRSSDHNPVIVDLKL 586 >gi|289208245|ref|YP_003460311.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288943876|gb|ADC71575.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 554 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 104/312 (33%), Gaps = 50/312 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +R+ + N+ G + +R + L + L AD++ E+ Sbjct: 266 APERAADGALRIATANLENDFVTLGERGASSRAERVRQE-AKLNTALRPLKADVITTIEL 324 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL---------Q 125 + A ERLI + + T AVR Sbjct: 325 ENRPAAR--------------ERLIERLNQHGDI---TYQAVRHPAPGTDAIKVGMSYRP 367 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIW-VLDIHLK--SFCFLDSLENTYSPSC 181 LL A R +R + +G+ ++ ++ +H K S C S + C Sbjct: 368 DRLELLDAVADGDRVHHRPPLLAWFGTLDGEPLFGIVAVHFKAKSGC-PSSGDIDRGQGC 426 Query: 182 SLLSQ--QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFP 238 + QA+ L WI Q++ +P +IAGD N Y + + D + P Sbjct: 427 WNERRTAQAERLAQWIEQERRDGLPVIIAGDLN---AYAAEDPLRLLREAGKRDLVHAEP 483 Query: 239 KEKDSRCNANKNLRNKIPIDYFV--------MDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + S ++ + +DY + + + + + + + ++ Sbjct: 484 DQAYSYVFRGQSGQ----LDYLLGPRDLEERVGKAGSWAINADEPAFLGFDGSQPAEGPW 539 Query: 291 RLSDHCPISIDY 302 R SDH P+ +D Sbjct: 540 RASDHDPVWLDL 551 >gi|188994745|ref|YP_001928997.1| hypothetical protein PGN_0881 [Porphyromonas gingivalis ATCC 33277] gi|188594425|dbj|BAG33400.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 375 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 101/302 (33%), Gaps = 71/302 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGSYNAVA 81 +++++++N+ G + + D + +Y K ADIV LQE + S + + Sbjct: 112 RIKVMTYNVK------GFDFRAH----NSEDPNPILKYIKGSGADIVCLQEAVLSRKSNS 161 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + T+ + R + S + RK + +L YP+L + Sbjct: 162 RYVGLRTFKKYLPEYRYMELSHARED---------RKGSGLMLLSKYPILDVHRIPYESA 212 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLEN------------------TYSPSC 181 + V+I G+K+ V++ HL+SF D E P+ Sbjct: 213 FNGSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY 272 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFP 238 +L + QA + +I + ++ GDFN + F Sbjct: 273 ALRAVQADSVSHYI--RCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTGRGPGFT 330 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + K+ ID+ + AY + +S SDH Sbjct: 331 FNQGA---------FKVRIDHILYSSGFLAYNCTVDKSVHA---------------SDHF 366 Query: 297 PI 298 P+ Sbjct: 367 PV 368 >gi|254464804|ref|ZP_05078215.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] gi|206685712|gb|EDZ46194.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacterales bacterium Y4I] Length = 331 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 109/338 (32%), Gaps = 65/338 (19%) Query: 24 VRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV---- 69 +RL ++NI L S + T + + LDAD V Sbjct: 1 MRLATYNIEWFAYLFDKNDRLVLDGKPSGVYGVDRYTQG--RAIAHVLRRLDADAVMVIE 58 Query: 70 ------------FLQEMGSYNAVAKV-----FPKNTWC-IFYSTERLINHSKRDSNNDIH 111 L+ + + FP +T I + + ++ D+ Sbjct: 59 APNTGRTQRTTRALEAFAAEAGLRACEAVSGFPNDTHQEIALLYDPEVLAAEHDARAS-- 116 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A A + + + +FS+ AV G ++ ++ HLKS Sbjct: 117 -AAAPQFDGLFEIDLDVDDHLDTVAFSKPPLELAVT---TRGGTRLRMIGAHLKSKAPHG 172 Query: 172 SLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 + + ++ +Q QA+WL + + ++ GD N G DF + Sbjct: 173 ASAPEEITALTIANQRKQLAQARWLHLRVADHVAAGEHVIVLGDLNDGPGADGYEKDFGQ 232 Query: 227 TI----------DPNDSLIRFPKEKDSRC-----NANKNLRNKIPIDYFVMDQN----AY 267 + DP+ + P+ N + +DY ++ + Sbjct: 233 SSIEIVLGDLLNDPHAQSLLQPRATSLPSTSRFYNPDTKRYFPALLDYVMISHSLMRFDP 292 Query: 268 KFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 ++ I F + Y +++++ SDH P+++D Sbjct: 293 QWRIWHPFEDAECYADEELREALLNASDHFPVTLDIAL 330 >gi|325925887|ref|ZP_08187256.1| putative extracellular nuclease [Xanthomonas perforans 91-118] gi|325543718|gb|EGD15132.1| putative extracellular nuclease [Xanthomonas perforans 91-118] Length = 572 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 102/344 (29%), Gaps = 70/344 (20%) Query: 8 ALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQ 59 L +P + +R+ S+N+ G + + RT + L + Sbjct: 252 VLSPLTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAK 311 Query: 60 YAKN---LDADIVFLQEMGS-----YNAVAKVFP-------KNTWCIFYSTERLINHSKR 104 LDAD+ L E+ + AV+++ W + Sbjct: 312 LVATIVPLDADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPG----- 366 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIH 163 ++ I I R V + + L G ++ SR +A G V+ H Sbjct: 367 --DDAIRVGILYRSSQVTPVGKPATLTGGPFENHSRVPLAQAFR---SARGATFVVVANH 421 Query: 164 LKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN--- 212 KS C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 422 FKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYA 481 Query: 213 -----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 R + G D + R +D+ ++ Sbjct: 482 MEMPMRSLRASGWQDA-FAVAGVKQPYSYVYDGLSGR------------LDHALLSPAMA 528 Query: 268 KFLIQESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 K L + I + D K R SDH P+ + + Sbjct: 529 KQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLAFSL 572 >gi|222086336|ref|YP_002544869.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] gi|221723784|gb|ACM26940.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] Length = 370 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 103/368 (27%), Gaps = 86/368 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNS----------VKRTTSDYTLL--RQYAKNLD----- 65 +RL ++N+ L + + ++N + + Y L + D Sbjct: 2 SLRLATFNVENLLTRFDYTGFRNQLRQDRVLKLFDVKNENIYQQLEAARVVAATDDTRQM 61 Query: 66 ---------ADIVFLQEMGSYNAVA--------KVFPKNT-WCIFYSTERLIN-----HS 102 ADI+ LQE+ S A+ ++ Sbjct: 62 TALAIADANADIICLQEVDSMAALQAFEYGYLYRMVGNGYRQKFLIEGNDSRGIDVAVMM 121 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLG------AKDSFSRAGNRRAVELLVEINGKK 156 + +++ + K + V + + L + R +EL + I G Sbjct: 122 REQTSDGQPIVLKDIKSHAMVTYRDFDLFTDELAALGLHEDDKIFKRDCLELDLTIGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV----PFVIAGDFN 212 + +HLKS + + + + ++ I + + F I GD N Sbjct: 182 FSLYVVHLKSMGPAREGVDGRQSTMPVRRAETLAVRHIIETRFGAGHTAAKNFAICGDMN 241 Query: 213 ------------RKINYLGNNDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNKIP-- 256 + D+ +D +D + + + + P Sbjct: 242 DYQERVDVIGTRHTGYRFEHRDEEASALDVFSHDGFVENVMRRRDELDRWTLYHARGPQE 301 Query: 257 -----IDYFVMDQNAYKFLIQ---------ESFSEILYNEDDIKSR------GKRLSDHC 296 +DY + + + F I +++ + SDHC Sbjct: 302 QWLCQLDYIWLSPALARANAARLPDVVRSGQPFRTIFPPGQEVERYPRTGWDRPKASDHC 361 Query: 297 PISIDYDF 304 PI + D Sbjct: 362 PIVMTLDL 369 >gi|260459779|ref|ZP_05808033.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259034581|gb|EEW35838.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 264 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 88/304 (28%), Gaps = 66/304 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNIN R L + DIV LQE+ + Sbjct: 1 MKIVTWNIN------------GVRAR----IGNLTHWLTESAPDIVCLQEIKTV------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ +A+ K D +R Sbjct: 39 ----DDQFPRAEIEALGYNVETHGQKGFNGVALLSKLRFDEVTKGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + + + LS A+ L+ W ++ Sbjct: 92 --IEGVFSTDKGALRVASLYLPNG----NPIDDEKKFPYKLSWMAR-LERWAEERLRLEE 144 Query: 204 PFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNANKNLR 252 V+AGD+N I+ + + + F + + +A Sbjct: 145 ALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQAFRRLLNLGFTEAVRAVTDAPDTYT 204 Query: 253 NKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ A S + + ++ SDH P++I Sbjct: 205 FWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIEKHV-------RAWEKPSDHVPVAI 257 Query: 301 DYDF 304 D Sbjct: 258 DLAL 261 >gi|74318784|ref|YP_316524.1| hypothetical protein Tbd_2766 [Thiobacillus denitrificans ATCC 25259] gi|74058279|gb|AAZ98719.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 281 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 94/303 (31%), Gaps = 45/303 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM-------- 74 ++L+SWNI +G D L + ++L A D++ LQE+ Sbjct: 1 MKLLSWNIQWGRGMDG-----------RVDLARLVRAIEHLGAFDVICLQEVAVNFPALP 49 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + +A P ++ + + S R + AI R +V + + P Sbjct: 50 GSRGEDQFAQLAAALPG-YTALYVAATDVPGASGRSRFGN---AIFSRLPVGQVWRHALP 105 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + R +E ++ + VL HL+ + + L +A Sbjct: 106 WRPEAGV--PSMQRALLEAVILREAGPLRVLTTHLEY--YSQGQRQLQIEAIRNLHAEAC 161 Query: 190 WLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + W ++E PF ++ GD N + Sbjct: 162 AMTRWAAPEEERGGPFASQGRPAQAILCGDMNFSPS-AAERARLLAPFADATPAWVDAWT 220 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + P+D FV + F+ ++ + + + SDH P+ + Sbjct: 221 ALHPGVPHPPSVGIHPVD-FVDHPECFDFVFATEGLSAALSDYGVDAETEA-SDHQPVWV 278 Query: 301 DYD 303 D Sbjct: 279 ALD 281 >gi|327395006|dbj|BAK12428.1| endonuclease/exonuclease/phosphatase [Pantoea ananatis AJ13355] Length = 371 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 41/268 (15%) Query: 58 RQYAKNLDADIVFLQEMGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Q +L ADI+ + E S A+ + P F + + +R + + T Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFGHVMVIDGNDERGIDVGLMTG 179 Query: 114 --IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ + FSR A+ L +G+ + VL H KS + Sbjct: 180 AGFAI---DTIRSHVDDKDKQGDLIFSRDCPEFAIPL---PDGQTLHVLVNHFKSKGYGA 233 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDP 230 + QA+ +K Q+ + + I GDFN + + + Sbjct: 234 KTLSDARR-----KLQAERVKAIYQQRIKEGQTLIAITGDFN-----DTPDSEALAPLLK 283 Query: 231 NDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ---------ESF 275 L +F + NK IDY ++ +K + + Sbjct: 284 ETDLKDIFTHEKFDNGGYPGTWGGCSASNK--IDYILLSPALWKKVEKGGVWRKGMWPGV 341 Query: 276 SEILYNE-DDIKSRGKRLSDHCPISIDY 302 + + ++K SDH + +D Sbjct: 342 RPVKWETYPELKKEVNAASDHAAVWVDL 369 >gi|265763129|ref|ZP_06091697.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255737|gb|EEZ27083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 287 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 99/326 (30%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L FF C AS + V ++S+NI + ++ + W R D Sbjct: 1 MEKIILLVLPFFAASCGLVKQQASAPEPVNVMSFNIRYDNPEDSLDNW-----RYRKDRV 55 Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + D DI+ QE+ + P + + ++A Sbjct: 56 ANAIHF--YDVDILGTQEVLHNQLEDLKLRLP--EYGVVGVGREDGKEKGE------YSA 105 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 + +K VL Y P + + A R A + ++ + K+ + L+ HL Sbjct: 106 LWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSDKEYFALNTHL- 164 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 SL+ + L D +P ++ GDFN +D Sbjct: 165 ----DHVGGMARREGISLMLDRVNELSD--------GLPVIVTGDFN----SEPESDVIK 208 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESF 275 D + + S + + IDY + + Sbjct: 209 HVTDSVNPEHLTDARQASSIVYGPSWSFHDFGKIPYNKRPLIDYVFV---------RNGL 259 Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301 + Y LSDH P+ + Sbjct: 260 KVLRYGILAETENNGFLSDHTPVLVT 285 >gi|305666984|ref|YP_003863271.1| putative secreted protein [Maribacter sp. HTCC2170] gi|88709217|gb|EAR01451.1| probable secreted protein [Maribacter sp. HTCC2170] Length = 258 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 100/306 (32%), Gaps = 52/306 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--TLLR 58 M K L +V + + S A +R++S+NI + T +D+ + Sbjct: 1 MKLKLFLFIVICIGFKSFSQADTLRVMSFNILHGAT-------------TKNDFNLDTIA 47 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + D+V LQE+ AK + T I + T+ ++ + AV Sbjct: 48 GVINKYNPDLVALQEVDFKTNRAKKYDLPT-EIGFRTKMASLFARAMYYDGGEYGEAVLS 106 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + ++ L S RA + + NG I + HL D L + Sbjct: 107 NLTFIGSENISLPHLPTSEPRAAL---LTRVKTRNGNIIQFVGTHL------DHLRDDTD 157 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 QA+ + + + + P ++ GD N G N + + + N + Sbjct: 158 R-----LMQAKAINEAL---GSTKYPTLLVGDLN-----DGPNSETIRILSENFHKPQL- 203 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + K+ +D+ ++ +I Y SDHC + Sbjct: 204 QAAKKKTWPADEP--KVCLDHILLTNPKKWKVIDYEVICENYA-----------SDHCIV 250 Query: 299 SIDYDF 304 F Sbjct: 251 VATLVF 256 >gi|158425166|ref|YP_001526458.1| endonuclease [Azorhizobium caulinodans ORS 571] gi|158332055|dbj|BAF89540.1| endonuclease [Azorhizobium caulinodans ORS 571] Length = 370 Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 80/292 (27%), Gaps = 47/292 (16%) Query: 39 GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 SL T + ++ AD++ L E+ S V I + + Sbjct: 100 AGSLELRDAPVTEEAMRNTARVIGDVKADVMALVEVES----RPVLSAFNTQILPAVNAI 155 Query: 99 I-NHSKRDSNND---IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 +H ND I IA R +S+ + A + +G Sbjct: 156 PFDHVMVIDGNDERGIDVGIATRADYPIGDMRSHVDDRLPNGQPIFSRDCAEYEIHTPSG 215 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNR 213 + + +L H KS F + QA + + Q+ + GDFN Sbjct: 216 QNLLLLLNHFKSKGFGSKATSDARR-----KAQAARVAEIYKQRIADGYSHIAVLGDFND 270 Query: 214 K---------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ D F N CNA+ IDY ++ Sbjct: 271 TPGSAALAPLLSGTDLKDVFGHASFDNGGYP----GTYGLCNADNK------IDYILLSP 320 Query: 265 NAYKFLIQESF------------SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +Y E + SDH + +D Sbjct: 321 ELFGKVTAGGVFRKGAWPGSRPKRWDVYPE--VARPADAASDHSAVWVDLAL 370 >gi|301311917|ref|ZP_07217839.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300830019|gb|EFK60667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 287 Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 55/320 (17%) Query: 2 IRKYVLALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 +++ +L L+ L A +K+ ++S+NI + + + WK D+ Sbjct: 1 MKRILLCLMVALFATGCLFAKNNDEKMNVMSYNIRYDNSGDKDNQWKF-----RRDFA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K +AD+ QE+ + + + + +V Sbjct: 54 ADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLEN 175 K L + +G K + +L + N GKK + L+ HL + Sbjct: 114 EKSGNFWLAEDINAVGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 SL+ +QA+ L +P ++ GDFN + +++ +P+D Sbjct: 169 ARHEGASLVLEQAKKLS--------ENLPIIVTGDFN----AVPSDEPIQVLTNPSDPRH 216 Query: 236 RFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKF---LIQESFSEILYNE 282 + + IDY + N ++ E+ + + Sbjct: 217 LTHSRTIAGFTYGPEWTFHDFGKIPYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFP-- 274 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDHCP+ Sbjct: 275 ----------SDHCPVISTL 284 >gi|196230561|ref|ZP_03129423.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] gi|196225491|gb|EDY19999.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] Length = 303 Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 101/311 (32%), Gaps = 37/311 (11%) Query: 3 RKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVK---RTTSDYTLL 57 R + L L L Q V + ++N+ +E V+ K ++ + + Sbjct: 5 RLFALLLAVRLPLAALGADQPPSVVIATYNVENYLGEESVAADTGPRKAKLKSEKEIDAV 64 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + K+++ DI+ + EMG F + + + + ++ +A+ Sbjct: 65 VRVVKDINPDILGICEMGEPER----FEDFKKRLADAGLHYTDFEYVQALDNQRH-LALV 119 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEINGK-KIWVLDIHLKSFCFLDSLEN 175 + V +QS + + + RR +++ +EI ++ + HLKS + E Sbjct: 120 SRYPIVARQSLSNVSYELAGQPEKVRRGFLDVTIEIRPGYQVRFVSAHLKSKLPVPEGEA 179 Query: 176 TYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +A L+ + + + V V GDFN N+ + + Sbjct: 180 LVRRN------EASLLRKHLDEILVADPNVRLVCFGDFN-----DLKNEPAYHEVAGVHG 228 Query: 234 LIRFPKEKDSRCNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + IDY + ++ + S + Sbjct: 229 PTYMTALPAKDELGDTWTEYWKAADLYSRIDYIFVSPVLHREISPGSPRVYR------SA 282 Query: 288 RGKRLSDHCPI 298 SDH P+ Sbjct: 283 YWNDASDHRPV 293 >gi|218460813|ref|ZP_03500904.1| putative metal-dependent hydrolase protein [Rhizobium etli Kim 5] Length = 242 Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 56/263 (21%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNND 109 D + ADI+ LQE+ + + ++ + H + Sbjct: 24 DPGRIASVIAEAGADIIALQEVD---VLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEE 80 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 81 QY-GDAIITALPTAAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL----- 128 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 + +LL+ W+ K+ +P ++ GDFN I Sbjct: 129 GLRGRDRIRQMTTLLN------SGWLRGTKDEPLPCILCGDFN--------------AIP 168 Query: 230 PNDSLIRFPKEKD-----SRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYN 281 + + + + ++ P +D+ + + + Sbjct: 169 SSATYRLATRSLKDALLGGKAAPRATFPSRYPLMRLDHIFVTDDL--------VVQRATV 220 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + +R SDH P+ + F Sbjct: 221 LQNRLTRVA--SDHLPLFAEISF 241 >gi|308813431|ref|XP_003084022.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] gi|116055904|emb|CAL57989.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] Length = 603 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 99/313 (31%), Gaps = 66/313 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+VSW + + K+ + RT R+Y + LDAD++ LQE+ Y+ Sbjct: 323 RVVSW------TERALMKAKSRLTRT-------REYIRELDADVLCLQELDGYDDDGSAV 369 Query: 85 PKN---TWCIFYSTERLINHSKRDSNN-----------DIHTAI---AV-RKKNVRVLQQ 126 +W + +E + R +N + T + AV + Sbjct: 370 TSTSLPSWRSWLESEGYDSRHVRRTNTKKDGSCVAWRRNAFTCVDHRAVSYNDIAHEMYS 429 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSP 179 D S R + + + +G ++ V H+ F D + Sbjct: 430 KSDNGDVDDERSDERERYLRDCVANLTVLKRMRDGAEVLVCSTHI----FWDPQYSDVKV 485 Query: 180 SCSLLSQQAQWL----KDWITQKKESLV----PFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQA+ L + ++ ++ + +I GDFN + D ++ + Sbjct: 486 ------QQAKRLVEECERFVDERASAGSDVRPHVIIGGDFN-----SEPDSDVYRVMTAT 534 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 S N IDY + ++E E Sbjct: 535 FSSA---SSGREPAFTNVTPSFTACIDYIFVSDGITVTRVKEQPRRETLGEG--LPNETH 589 Query: 292 LSDHCPISIDYDF 304 SDH P+ +D F Sbjct: 590 PSDHLPVVVDVSF 602 >gi|42528087|ref|NP_973185.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] gi|41819132|gb|AAS13104.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] Length = 339 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 89/264 (33%), Gaps = 55/264 (20%) Query: 66 ADIVFLQEMGSYNAVA---KVFPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ LQE+ S + K+ P N + +F + + + + + + Sbjct: 101 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFI-----PPQNGGAFSTALLSKFPITET 155 Query: 120 NVRVLQQSY-PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V + L ++ R GN ++ +L++H KS + N+ + Sbjct: 156 KVFNVYSGKRSLRPLIETRIRIGN--------STGDNELVLLNVHWKS-----KVGNSDT 202 Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDS 233 S QQ + + + K S PF+I GDFN+ + + L D+ W ++ Sbjct: 203 DSIR--RQQEEQAYKRLKELKASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNI----EA 256 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---------------AYKFLIQESFSEI 278 +E + + ID+F N K L S Sbjct: 257 YRAAAQEGSQPAGSYFYKESWEGIDHFFYSDNLSDGKNFDLSFFCVINLKPLTDTSGKPD 316 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y+ K SDH PI I Sbjct: 317 KYSVYSGKGY----SDHLPIGIIL 336 >gi|121998516|ref|YP_001003303.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] gi|121589921|gb|ABM62501.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] Length = 570 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 110/314 (35%), Gaps = 50/314 (15%) Query: 18 ASVAQKVRLVSWNIN----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 A VR+ ++N+ TL E+ S + +R L A++L AD++ L E Sbjct: 276 PPEAGTVRVAAFNVENYFLTLGERGAASEVELERQR-----AKLLAAAESLHADVLVLVE 330 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 M + P++ ++ ++ I ++A R+ V+ + ++ Sbjct: 331 MENRQDA----PEDFVERLAASTGHPWRLARGGETGSDAIKVSLAYREDRVQPVTETVRD 386 Query: 131 LGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSC--SLL 184 G R + G+ V IH KS C D+ + C Sbjct: 387 ARRVHHRPPPLVGFRP------QGGGEPFAVAGIHFKSKTRC-PDAGDVDRGQGCWNHRR 439 Query: 185 SQQAQWLKD----WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++QA+ L + W ++ +P +IAGD +N G D + + + + Sbjct: 440 TEQAEALAEFLGRWRAER-SEALPVLIAGD----LNAYGGEDP-ARALAAAGKVDLLAEH 493 Query: 241 KDSRCNANKNLRNKI-PIDYFVMDQN--------AYKFLIQESFSEILYNED--DIKSRG 289 R + +D+ + + + ++ D ++ Sbjct: 494 LAWPDRYTYVFRGESGYLDHLQAHPALAERVAAVHRHPINADEPRFLEFDGDPGRVREDA 553 Query: 290 KRLSDHCPISIDYD 303 R SDH PI++D + Sbjct: 554 YRSSDHDPIAVDLE 567 >gi|262369779|ref|ZP_06063107.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315847|gb|EEY96886.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 440 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 95/298 (31%), Gaps = 46/298 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 AS A + +++++NI L + R L+ Y D + QE Sbjct: 166 PVASSADEFKVLTYNIYAL-----PLVASKIDSRLEQLPQNLKGY------DAILFQETF 214 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYP 129 G +AK+ + + + S +I+ + +A V+ YP Sbjct: 215 ASGRTAMLAKLAQEYPYQTYI---------PIGSGFNIYDSGILVASHHPIVKTDHFIYP 265 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 D F+ G A + NGK V H S F +Q + Sbjct: 266 SCPGIDCFADKGVIYA---EILKNGKAYHVTSTHTAS--FDTDAARDMR---QQQFKQIR 317 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D Q S ++ GDFN L D I+ N ++ +S + Sbjct: 318 ALVD--KQNIPSFDAVLMGGDFNVN-KLLWPQDYAQMQINLNGTVPVSTGYTESTFDPRV 374 Query: 250 NL---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N +DY V N + + + IL + D LSDH P+ Sbjct: 375 NKLAGAGLTGGSTVEYLDYVVSSNNHRQPMQARNDVRILRSAADPLFMTWDLSDHFPV 432 >gi|315299279|gb|EFU58531.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 16-3] Length = 253 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 81/260 (31%), Gaps = 51/260 (19%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LR + + ADIV LQE+ + + + + + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---------MGAHEVHLLHVENWPDTSHYEFLADTMWSDFAY 83 Query: 117 ---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHL 164 N + + +D +R V ++ + GK I V+ +HL Sbjct: 84 GRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL 143 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 L + + Q L +W+ + + P ++AGDFN D Sbjct: 144 -------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR 180 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + + E +R + + +D+ K + + + Sbjct: 181 -QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP----- 234 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 -LRTWRHLSDHAPLSAEIHL 253 >gi|240141150|ref|YP_002965630.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] gi|240011127|gb|ACS42353.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] Length = 275 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 95/298 (31%), Gaps = 67/298 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 21 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69 Query: 75 ---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A++ +S H + + AV L+ Sbjct: 70 VGRPRTDGLDQAEEIARLVG------MFSHFHPALHIEEE-----RYGDAVLTHLPSRLK 118 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ PL G R A+ + V K+ VL H L + Sbjct: 119 RAGPLPGLLRRPGLEP-RGALWVEVTAGASKLQVLTTHF-------GLLGAERVA----- 165 Query: 186 QQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 QA+ L DW+ P V+ GDFN +G + + + R E+ Sbjct: 166 -QAKALLGPDWLGD-PACHAPTVLLGDFN----AMGWSRAYRRLSGRLTDARRLTGERRW 219 Query: 244 RCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 R ++ P +D+ + + I D +R SDH P+ Sbjct: 220 R-RGGATFPSRFPLLRVDHVFVSERVAVERIA--------VVDTPLARKA--SDHLPV 266 >gi|218658684|ref|ZP_03514614.1| putative metal-dependent hydrolase protein [Rhizobium etli IE4771] Length = 216 Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 81/260 (31%), Gaps = 56/260 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHT 112 + ADI+ LQE+ + + ++ + H + + Sbjct: 1 RIASVIAEAGADIIALQEVD---VLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEEQY- 56 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 57 GDAIITALPTAAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL-----GLR 105 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + +LL+ W+ K+ +P ++ GDFN I + Sbjct: 106 GRDRIRQMTTLLN------SGWLRGTKDEPLPCILCGDFN--------------AIPSSA 145 Query: 233 SLIRFPKEKD-----SRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + + ++ P +D+ + + L+ + + + Sbjct: 146 TYRLATRSLKDALLGGKAAPRATFPSRYPLMRLDHIFVTDD----LVVKRATVLQNRLTR 201 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + SDH P+ + F Sbjct: 202 VA------SDHLPLFAEISF 215 >gi|116328809|ref|YP_798529.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331719|ref|YP_801437.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121553|gb|ABJ79596.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125408|gb|ABJ76679.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 362 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 103/334 (30%), Gaps = 76/334 (22%) Query: 15 PCTASVAQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 K++L+ WN+ L+ + S + + Y ++ Sbjct: 43 APILKADSKIKLLVWNVQYLAGKKRVFWYDLPEGDGPDVGPSREEIEETLKKVTDYIRSE 102 Query: 65 DADIVFLQEMGS-------YNAVAKVFP--KNTW----CIFYSTERLINHSKRDSNNDIH 111 D++ QE+ + + ++ + FY + H K + + Sbjct: 103 SPDVILFQELHDGSKNTFEEDQLERILSQIGPAYMCKSEAFYWKSFFVPHPKIWGSVGMK 162 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFC 168 A + K ++ S PL+ A ++ +RA+ +L +E G K VL+ HL +F Sbjct: 163 LATVSKYKISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIE-GGDKFTVLNTHLDAFS 221 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLG-- 219 + +Q + + + + + +V+ GDFN RK+ + Sbjct: 222 QGTD----------TMRRQVETIAGLLKELDLAGHYWVLGGDFNLLPPGFDRKLMHPNGA 271 Query: 220 -------NNDDF---------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 + ++ + + + IDY Sbjct: 272 FFYSDEQEIKPLFDRWSSAVPFNILNGVGREKYYTYYPNDPAIGKPDR----TIDYIFYS 327 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + Y D ++ +SDH P Sbjct: 328 ---------SNLKQTEYKVDQGETL-WTISDHFP 351 >gi|15965272|ref|NP_385625.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307309295|ref|ZP_07588963.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|307317036|ref|ZP_07596477.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|15074452|emb|CAC46098.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306897124|gb|EFN27869.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306900296|gb|EFN30913.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 263 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 100/307 (32%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L + + + DI LQE+ S + + Sbjct: 1 MKIATWNIN------------GVKAR----LDGLVGWLRESNPDIACLQEIKSVD---ET 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D SR Sbjct: 42 FPRGE-------IEALGYHVETHGQKGFNGVALLSKVRPDEINRGLPGDPADEQSRF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + +NG + V ++L + +++ + Y + + L + Q+ Sbjct: 92 --IEGVFSVNGGALRVCCLYLPNGNPVETEKYPYKLA------WMRRLAAFAEQRLVLEE 143 Query: 204 PFVIAGDFN--------------RKIN-YLGNNDDFWKTIDPN--DSLIRFPKEKD---- 242 P ++AGD+N R YL ++ + +R ++ Sbjct: 144 PLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAFRRLRNLGFTDAVRATSDEAPLYS 203 Query: 243 -----SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + C I ID+ ++ A L+ S + + ++ SDH P Sbjct: 204 FWDYQAGCW---QKNFGIRIDHLMLSPEAADKLVSTSIEKHV-------RAWEKPSDHVP 253 Query: 298 ISIDYDF 304 ++ ++ F Sbjct: 254 VTAEFAF 260 >gi|315182338|gb|ADT89251.1| endonuclease/exonuclease/phosphatase family protein [Vibrio furnissii NCTC 11218] Length = 322 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +VR + N+ N L+ + N ++T L Q L+AD++ QE+ S +A Sbjct: 2 QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTTLNADVIGFQEVFSPHA 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + F + + S + IA R V L G F R Sbjct: 62 LRDQVAALGYPYFEVIDT-PHVSDDYIYSSPVVGIASRFPLSEVAAVETSLDGF--HFHR 118 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF--------------CFLDSLENTYSPSCSLLS 185 R + ++ V +H KS + L + + Sbjct: 119 KPLRATLN---HPALGQVDVYVVHFKSQRPMLHEPISDTLVDAWQQELRGRWQSAMQR-G 174 Query: 186 QQAQWLKDWITQKKES-LVPFVIAGDFNRKIN 216 Q+A L I Q+K+ P V+ GDFN+ ++ Sbjct: 175 QEAHLLHQAIVQRKQQRQHPVVLMGDFNQVLS 206 >gi|157376913|ref|YP_001475513.1| hypothetical protein Ssed_3781 [Shewanella sediminis HAW-EB3] gi|157319287|gb|ABV38385.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 381 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 105/354 (29%), Gaps = 79/354 (22%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMG 75 ++ +++ ++N+ E G + ++ T + + Y D++ QE+ Sbjct: 34 ASELIKIATFNLFNFIEPPG-AFYEFENIYTQEQWQKKLDWIATYINEHQPDVIGFQEVF 92 Query: 76 SYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-- 130 + +A+A++ + + + A+A R V + Sbjct: 93 TPDALAQLTQRCGLEYFAVL----DTPEVVDDFIYSKPVVALASRYPITEVHNVTVGDGW 148 Query: 131 ---LGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKS-----------FCFLDSLEN 175 +G +D F + R+ + + + + +H KS S ++ Sbjct: 149 ASMMGLQDDFGFS--RKPLRVTISLPKLGSCDCYVVHFKSKRPLFDAQELNGLTTPSADS 206 Query: 176 TYSPSCSLLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKIN-- 216 + LLS + L W + ++ ++ P V+ GDFN ++ Sbjct: 207 SGGNVGQLLS--IEALAQWGSSIQRGCEAALLRYSMVERRTQTGNPMVLMGDFNDILSDG 264 Query: 217 ---------YLGNNDDFWKTIDPNDSLIRF--------PKEKDSRCNANKNLRNK----I 255 D ++ R + C Sbjct: 265 VLASLTSVDTRIKPDPLLGEVEHQLRDHRLKDAYELYQSSQYSLSCQQRPATHYYFAKGS 324 Query: 256 PIDYFVMD---QNAYKFLIQESFSEILYNEDDIKSRGKRLS---DHCPISIDYD 303 +DY ++ + E Y+ I R +R S DH P+ I Sbjct: 325 VLDYILLSSEFDIKNSRSLAEVGRYETYDRHLINPRFERDSQSTDHAPVMITIS 378 >gi|323138553|ref|ZP_08073621.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] gi|322396187|gb|EFX98720.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] Length = 319 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 96/324 (29%), Gaps = 63/324 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 ++RL ++N+ L + + R + L ++DADI+ LQE+ + Sbjct: 3 EMRLATFNLENL---DWAPGRPEAFARRRAALLPL---LDDIDADILCLQEIDAQKTSKH 56 Query: 79 ------AVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKK---------- 119 A+ ++F + F S + N I + +R + Sbjct: 57 GPRAYLALDRLFDGTRYAGFHRFTSLRPGADTPADVHNLAILSRWPIRIRRQIHHEIVPP 116 Query: 120 --NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + R AVEL +G+ + V+++HL++ + Sbjct: 117 WPWPPPRDGDVTPPPIAIGWDRPMLYAAVEL---PDGRLLHVVNLHLRAPRPVPVPTARG 173 Query: 178 SPSCS---------LLSQQAQWLKDWITQK----KESLVPFVIAGDFNRKINYLGNNDDF 224 S L ++ Q L+ + + E I GDFN + Sbjct: 174 EGSSRALIEGQFVAALKREGQALEARLFAETIFDAEPDALLAICGDFNAD-EHDAPTRLL 232 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLR-----NKIPIDYFVMDQN-----AYKFLIQES 274 D + R + R ID+ + ++ Sbjct: 233 RGGRDEGEDAPRALLALEERVAPASRYTVIHAGRPTLIDHILASHALAAMWRSTAILNAG 292 Query: 275 FSEILYNEDDIKSRGKRLSDHCPI 298 + Y +D I S H P+ Sbjct: 293 LQDEFYAKDPIDG-----SLHAPV 311 >gi|291234349|ref|XP_002737107.1| PREDICTED: deoxyribonuclease I-like 3-like [Saccoglossus kowalevskii] Length = 446 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 85/253 (33%), Gaps = 37/253 (14%) Query: 64 LDADIVFLQEM--GSYNAVAKVFPK------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L D++ +QE+ S A+ ++ + N + I S HSK A Sbjct: 61 LRNDVILIQEIRDSSETAILRLLAEINRASDNKYSIEISDRLGRTHSKEQ------YAFF 114 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDS 172 R +V + + + G + + + R + + ++ IH K + Sbjct: 115 YRTDSVNMTESYHYDDGEEQNGTDEFEREPFIVRFSSPSTAVSDFVMVAIHTKPDDAVKE 174 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 ++ + W ++ +I GDFN +Y+ + D + + + Sbjct: 175 IDYLTDVY-------DDIVSRW------NIEDVIILGDFNAGCDYVKSKDWNYIRLRTDK 221 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNE--DDIKSRG 289 +++ A+ D V+ + + +S + ++E D + Sbjct: 222 RFTWLIDDREDTTVASTFCAY----DRIVIGGTTLEGAVWPKSSRVLYFDEKFDLTDDQA 277 Query: 290 KRLSDHCPISIDY 302 +SDH P+ Sbjct: 278 AAVSDHYPVEFKL 290 >gi|86360979|ref|YP_472866.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] gi|86285081|gb|ABC94139.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] Length = 242 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 79/263 (30%), Gaps = 56/263 (21%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + +ADIV LQE+ + + + S ++ H S + Sbjct: 24 DPGRIASVIAEAEADIVALQEVDVLR--RRTGGVDQAHVIASLLKMQAHFHPALSIAEEQ 81 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ ++ PL ++ R A+ + + + +K+ V++ HL Sbjct: 82 YGDAIITALPTGAVKAGPLPSIGEA------RGALSIEILVGDRKLLVVNTHL-----GL 130 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDDF 224 +LL+ W+ + VP ++ GDFN ++ D Sbjct: 131 RGRERIRQMTTLLN------SGWLRGPSDEPVPGILCGDFNAIPSSATYRLAARSLTD-- 182 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYN 281 + ++ P +D+ + + + Sbjct: 183 --------------AQLAGSAAPRATFPSRYPLMRLDHIFVTEGL--------VVQRATV 220 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 +R SDH P+ + F Sbjct: 221 LQTRLTRVA--SDHLPLLAEISF 241 >gi|323343049|ref|ZP_08083280.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463113|gb|EFY08308.1| endonuclease/exonuclease/phosphatase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 360 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 63/321 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--------YTLLRQYAKNLDADIVFLQEM 74 L+++NI + + + + + +D + ++ + D QE+ Sbjct: 63 PYTLLTYNIGYAALGQDQDFFMDGGNKAGADTLEEVLLNMDGILSIFQDTNPDFALFQEV 122 Query: 75 GSYNAVAKVFPKNTWCIF----YSTERLINHSKR-------DSNNDIHTAIAVRKKNVRV 123 + + F N + + Y N+ + + IA K + Sbjct: 123 D--LSGKRSFNVNQYDLLRNEGYHGIFAPNYKVKYVPVPFTHPMGGAESGIATLSKAEPL 180 Query: 124 LQQSYPLLGA-KDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS 180 Y G +RA + NGK+ +++ H +F + Sbjct: 181 SSTRYQFNGKEPLVKQLFDLKRAFSVTRYPMDNGKEFILINAHFSAF------DKGGKVR 234 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAG-DFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L+Q + L+ + + +V+ G DFN ++ +++ W P+ + Sbjct: 235 VQQLAQMKEVLES-----EYNQGNYVVLGGDFNHELPTTDSHNFTWTDSYPDWIMELPED 289 Query: 240 EKDSRCNANKNLRNKI----------------PIDYFVMDQNAYKFLIQESFSEILYNED 283 S + + N ID F++ N + + Sbjct: 290 FAPSGYHWGVDPDNPSVRAVDKAYRPQETFMAVIDGFLVSDNIE-----------IIDTV 338 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + + + SDH P+S+ F Sbjct: 339 GLGTVDFKYSDHNPVSMTIIF 359 >gi|320104723|ref|YP_004180314.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319752005|gb|ADV63765.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 390 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 91/322 (28%), Gaps = 77/322 (23%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS---------VKRTTSDY 54 VLAL P ++ WN+ S + V+ + V R + Sbjct: 108 PLVLALGTLFGP----------VMDWNVPWRSWVDPVAPDSPTIRVVTLNTGVGRFHA-- 155 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 Y D++ LQE S V + W Sbjct: 156 ERFAAYVDQHGPDLIGLQEAQSSELVNWLTNPGDW------------------------F 191 Query: 115 AVRKK-NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKS---FCF 169 R+ + + + D G R V +V + I +++HL+S Sbjct: 192 TARQGELIFASRWPIERVELLDDRRDFGFRGTVAAVVVRSPWGPIRWVNLHLRSPRDGLT 251 Query: 170 LDSLENTYSPSCSLLSQQAQWL-----KDWITQK-KESLVPFVIAGDFNRKI-NYLGNND 222 N + + L+ + + L WI + +P ++ GDFN+ +YL D Sbjct: 252 NAFYGNPQAIADMTLNLKRRDLGSQVASSWIRAQSARDGLPTIVCGDFNQPTQSYLFRRD 311 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + + + ID+ + + + E ++ Sbjct: 312 W-----GGFADAFQVAGLGYGHTWFSSWHGLR--IDHVLGSPSHWNPRRCEVGPDMR--- 361 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 SDH P+ D Sbjct: 362 ----------SDHRPVLADLAL 373 >gi|225023438|ref|ZP_03712630.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] gi|224943787|gb|EEG24996.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] Length = 255 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 86/300 (28%), Gaps = 75/300 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + + + D++ LQE Sbjct: 1 MKIATWNVNSLKVR----------------LPHVSDWLIQHQPDVLCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S ++ + S + +A+ K+ V+ + P L Sbjct: 35 LKLDQDQFPLSAFEMLGYRAVWSGQKTYNGVAILSKEEVQNVHTGLPAL------PNDPQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKES 201 RR + + + V+D++ C + + QQ L ++I + Sbjct: 89 RRVIAATI----GGVRVVDVY----CVNGEAVGSEKFA---YKQQWFAALAEFIRSELAQ 137 Query: 202 LVPFVIAGDFN---RKINYLGNNDDFWKTIDP-------NDSLIRFPKEKDSRCNANKNL 251 V+ GDFN ++ K + L + R + + L Sbjct: 138 YPELVLLGDFNIAPADLDVYDPEKWQGKILCSAEERAWFQTLLDLGLTDSLRRLHPAEPL 197 Query: 252 RNKI-------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+ + Q L D +R SDH P+ Sbjct: 198 YTWWDYRMNMFRRKLGLRIDHILASQALLPRLAAAGV-------DTAPRALERPSDHAPV 250 >gi|326798495|ref|YP_004316314.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549259|gb|ADZ77644.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 268 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 96/316 (30%), Gaps = 60/316 (18%) Query: 1 MIRKYVLALV---------FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 M + ++ L F TA+ +R++++NI+ + L Sbjct: 1 MNKAFLRTLFTITCLLQFIFGAEIVTANEKDTLRIITYNIHHANPPSKPGLI-------- 52 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDI 110 D + D+V LQE+ N N S + +H + + Sbjct: 53 -DLEAIAAVINQNKPDLVALQEVD-VNNRRSGKNLNEAAALGSLTGMHHHFVKAIDYEGG 110 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ K + Q+ +L + + A+ + GK + HL Sbjct: 111 AYGVAILSKWP-IQQKDSLILPMAEGSNGEPRVLAIVAVEPKPGKPLVFASTHLD----- 164 Query: 171 DSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 L +Q + L + + + P ++ GDFN +D I Sbjct: 165 -------------LKEQNRLLQAEAIVKKLSTYSQPVILGGDFN----AKPESD----VI 203 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + D+ K S + ID+ + ++ + Y Sbjct: 204 NHFDTYFSRSKTSGSAAFTIPEVNPDREIDFIMFRPKKRFQSVRHEVIKEPYA------- 256 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ ++ + Sbjct: 257 ----SDHLPVMVELTY 268 >gi|218437404|ref|YP_002375733.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218170132|gb|ACK68865.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 1073 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 100/309 (32%), Gaps = 45/309 (14%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLD-ADIVFLQEM- 74 ++ + S+N+ L + + R +T + Q NL DI+ LQE+ Sbjct: 627 TPTTDQLTVASYNVENLDPNDNDGDTDIADGR----FTAIAEQIVNNLKTPDIIALQEVQ 682 Query: 75 -GSYNAVAKVFPKN-TWCIFYST--------------ERLINHSKRDSNNDIHTAIAVRK 118 + + + + T+ + + S +I Sbjct: 683 DNDGSVNSNIVDASLTYQTLIDAIVDAGGPRYEFADIPPIDDQSGGQPGANIRVGYLYNP 742 Query: 119 KNVRVLQQSYP---LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL--KSFCFLDSL 173 V ++++S D + +R + N +++ +++ H K Sbjct: 743 NRVDLIEESLTRIEDPNLADGNAFENSRNPLAATFVFNEQEVTLVNNHFASKGGSSPLFG 802 Query: 174 ENTY--SPSCSLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTID 229 + S +QAQ + ++++ S ++ GD N + + + +T+ Sbjct: 803 SVQPPINGSVDQRIEQAQVVNNFVSNILGSNPDANAIVLGDLN-EFQFFSPLEILQQTL- 860 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N + E+ S N +D+ ++ N L F + N Sbjct: 861 NNLTFSLPENERYS----YIFEGNSQQLDHILVSDN---LLNSAEFDIVHINSQ----FA 909 Query: 290 KRLSDHCPI 298 + SDH P+ Sbjct: 910 DQTSDHDPL 918 >gi|291618627|ref|YP_003521369.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] gi|291153657|gb|ADD78241.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] Length = 371 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 41/268 (15%) Query: 58 RQYAKNLDADIVFLQEMGSYNAV----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Q +L ADI+ + E S A+ + P F + + +R + + T Sbjct: 120 AQVMIDLKADILTVVEAESRPALLEFNNAMLPARQGTPFDHVMVIDGNDERGIDVGLMTG 179 Query: 114 --IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ + FSR A+ L +G+ + VL H KS + Sbjct: 180 AGFAI---DTIRSHVDDKDKQGDLIFSRDCPEFAIPL---PDGQTLHVLVNHFKSKGYGA 233 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDP 230 + QA+ +K Q+ + + I GDFN + + + Sbjct: 234 KTFSDARR-----KLQAERVKAIYQQRIKEGQTLIAITGDFN-----DTPDSEALAPLLK 283 Query: 231 NDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ---------ESF 275 L +F + NK IDY ++ +K + + Sbjct: 284 ETDLKDIFTHEKFDNGGYPGTWGGCSASNK--IDYILLSPALWKKVEKGGVWRKGMWPGV 341 Query: 276 SEILYNE-DDIKSRGKRLSDHCPISIDY 302 + + ++K SDH + +D Sbjct: 342 RPVKWETYPELKKEVNAASDHAAVWVDL 369 >gi|221640247|ref|YP_002526509.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides KD131] gi|221161028|gb|ACM02008.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides KD131] Length = 339 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 103/350 (29%), Gaps = 78/350 (22%) Query: 21 AQKVRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--- 67 A+ +R+ ++N+ L +S +R L LDAD Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQ--IESLGIVFTALDADAIM 59 Query: 68 -------------IVFLQEMG---SYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNN 108 + L+ A V + I + + D Sbjct: 60 VIEAPNQSRRRSTVKALETFARTFDLRASRAVMGFPSETEQEIALLYDPARIEAHHDP-- 117 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A A R +V FS+ EL + +G + V+ +H KS Sbjct: 118 -QASAKAPRFDDVFRFDIDVDATPEAIRFSKPPL----ELALRADGHPLRVIGVHAKS-- 170 Query: 169 FLDSLENTYSPSCSL-LSQQAQWLKD--WITQKKES----LVPFVIAGDFNRKINYLGNN 221 + + + + + Q L + W+ ++ ++ GDFN L Sbjct: 171 KAPHGARNPAEAVRIAIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPG-LDEY 229 Query: 222 DDFWK--------------TIDPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDY 259 + + + ++ R + + + +D+ Sbjct: 230 EKLFGRSGIEIVLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDF 289 Query: 260 FVMDQN----AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + ++ I ++ + +++ SDH P+++D D Sbjct: 290 IMVSADLAAKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDIDL 339 >gi|114707796|ref|ZP_01440690.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] gi|114536785|gb|EAU39915.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] Length = 244 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 97/284 (34%), Gaps = 50/284 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R V++NI S +R + +L AD+V LQE+ Sbjct: 1 MRFVTYNI--------HSCLGTDRRRDP---DRIGAVISDLRADVVALQEVD-VGRARSG 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNN--DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F I + + ++H IA ++ L ++ LL ++ Sbjct: 49 FVDQAQRI--AEKTGLHHYFFAPVEECGERYGIAFLTRSAATLMKA-ALLPGLQTYPNLE 105 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-KDWITQKKE 200 R A+ + +E + V++ HL S L+Q A L +W+ + Sbjct: 106 PRGALLVQLESEAGVMNVVNTHL------------GLRSRERLTQAAALLASEWL---AD 150 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDY 259 PFV+ GDFN ++ + ++D S R I +D+ Sbjct: 151 LSAPFVLLGDFN-AVSGSKAHSLLTASLDDARRF-----GGRSGLRPTFPSRFPILALDH 204 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ ++ +R SDH P+ ID+D Sbjct: 205 CFFRGD---LKVRSAYVVR-------SPLVRRASDHLPLVIDFD 238 >gi|296876028|ref|ZP_06900084.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] gi|296432939|gb|EFH18730.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] Length = 770 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 104/336 (30%), Gaps = 63/336 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 T K+ + S+NI S KN + + DI+ L E Sbjct: 339 AAQTQPSEDKLTIASYNIENFSANNA----KNETPEDKVTLIANSFIHEIHNPDIITLIE 394 Query: 74 MGS------------YNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + K+ ++ + + ++I I Sbjct: 395 VQDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGIL 453 Query: 116 VRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + V + ++ P A + S R+++ + E G+ + Sbjct: 454 YNPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPVV 513 Query: 159 VLDIHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 V+ HLKS D++ P+ QA + ++ + K+ S FV+ GDFN Sbjct: 514 VIANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNSKTTFVLTGDFN 573 Query: 213 ----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 + ++ +D +D+ R+ +D + N Sbjct: 574 DYDFSTTAQILAGNELTNLMDQHDAGDRYSYFYRGS---------NQVLDNIFISNN--- 621 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ E ++ R SDH P+ + +F Sbjct: 622 -MAAKARFEPVHINASFMKEHGRASDHDPVLVQIEF 656 >gi|163749176|ref|ZP_02156426.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] gi|161331246|gb|EDQ02135.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] Length = 365 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 108/365 (29%), Gaps = 79/365 (21%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADI 68 ++ ++ ++++ S+N+ + ++ T + + +Y D+ Sbjct: 1 MLSTSSDSHYQLKIASFNLFNFIAPPD-ACYEFDNIYTQEQWQKKLNWIAKYLNEHQPDV 59 Query: 69 VFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + QE+ S + K + + + S + + + + + +++ + Sbjct: 60 IAFQEVFSPDELETLTKACGLDYFSVLDSPQVMDDFIYSKPVVALASRYPIKEAVSVSVD 119 Query: 126 QSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSC 181 + + L ++ FSR R V+L +H KS D+ + + + Sbjct: 120 KEWAAQMGLVSEFEFSRKPLRATVDL---PKLGLCDCYVVHFKSKRTLFDAQDIKANSAT 176 Query: 182 SLLSQQ-------------AQWLKDW-----------------ITQKKESLVPFVIAGDF 211 S + + L W + ++ ++ P ++ GDF Sbjct: 177 SSFRKSSAGAELNTGQLLAIEALGRWGSSVQRGSEAALLRYAMVERRSQTQNPMILMGDF 236 Query: 212 NR-----KINYLGNNDD--------------------FWKTIDPNDSLIRFPKEKDSRCN 246 N + L + D + + + L + + S Sbjct: 237 NDILSDGVLAALTSVDTRIKPQADMSQGAMGDIAHQLGFYRLQDSYDLYQASQYSLSEQA 296 Query: 247 ANKNLRN---KIPIDYFVMD---QNAYKFLIQESFSEILYNEDDI---KSRGKRLSDHCP 297 +DY ++ + E Y+ I + +DH P Sbjct: 297 RPATHYYFAQGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAP 356 Query: 298 ISIDY 302 + I Sbjct: 357 VMITI 361 >gi|254563662|ref|YP_003070757.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] gi|254270940|emb|CAX26945.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] Length = 275 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 93/306 (30%), Gaps = 83/306 (27%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 21 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 69 Query: 75 ---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A++ +S H + + AV L+ Sbjct: 70 VGRPRTDGLDQAEEIARLVG------MFSHFHPALHIEEE-----RYGDAVLTHLPSRLK 118 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ PL G R A+ + V K+ VL H L + Sbjct: 119 RAGPLPGLLRRPGLEP-RGALWVEVAAGASKLQVLTTHF-------GLLGAERVA----- 165 Query: 186 QQAQWL--KDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLI 235 QA+ L DW+ P V+ GDFN +++ Sbjct: 166 -QAKALLGPDWLGD-PACHAPTVLLGDFNATGWSRAYHRLS------------GRLTDAR 211 Query: 236 RFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 R E+ R ++ P +D+ + + I D +R Sbjct: 212 RLTGERRWR-RGGATFPSRFPLLRVDHVFVSERVAVERIA--------VVDTPLARKA-- 260 Query: 293 SDHCPI 298 SDH P+ Sbjct: 261 SDHLPV 266 >gi|107029003|ref|YP_626098.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116689839|ref|YP_835462.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105898167|gb|ABF81125.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116647928|gb|ABK08569.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 284 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 114/313 (36%), Gaps = 64/313 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVV----DLPRTVAAIRRLGDF------DVLCLQELTRGFDALSG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + I + + + + AIA R RVL+QS P Sbjct: 51 RPGPDQFAELAALLPG--YTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + + R A+++ ++ + + V+ HL + +D+L + + +C+ Sbjct: 109 WPA--DAGAPSMPRVALDIELQASFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAH 166 Query: 184 LSQQAQWLKDWITQKK----ESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + A + + P ++ GDFN ++D + + ++P F Sbjct: 167 ADRPAPA-----ETPEGPFSATGQPRDAIVCGDFN----SAFDSDAYRRLLEPIADAPGF 217 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------G 289 +R + I + ++ + ++ D + R Sbjct: 218 VDAWIAR-HPGHTPPPTAGIY------DTVQWSDGPLACDFVFVTDTLLPRVIGCEIDGD 270 Query: 290 KRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 271 VRASDHQPVLLEL 283 >gi|255530398|ref|YP_003090770.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343382|gb|ACU02708.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 370 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 103/310 (33%), Gaps = 76/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+++ ++ + +N + DI+ QE + Sbjct: 106 IRMMTYNVHSFKPYGEGNIESVK--------QQMLDLIENENPDIICFQEYFTRK----- 152 Query: 84 FPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K + I S +R++N N+ T +A+ YP+ Sbjct: 153 --KGPYDITDSLKRILNKPYHYFEPISQNDYEATGLAI--------FSKYPIKNKGTIAF 202 Query: 139 RAGNRRAVELLVEIN--GKKIWVLDIHLKSFCF-------LDSLENTYSP----SCSLL- 184 R + V++ K + ++H++S F LD ++ P S +L Sbjct: 203 NKVYRGNSSIYVDVTVKNKMFRIYNVHMQSISFQEQDYMYLDQVKYQMDPKLYASKRILV 262 Query: 185 ---------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S+Q +K I + +PF+IAGDFN SL Sbjct: 263 MLRNAFLKRSEQVDIMKAHIKTCE---LPFIIAGDFNDTPASYAVK-------QMTKSLK 312 Query: 236 RFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 KE+ + N + IDY ++F + Y +LSD Sbjct: 313 NTFKEQGTGFGKTYNGKFPNFQIDYI---------ATTQNFDVMNYR-----IIEAKLSD 358 Query: 295 HCPISIDYDF 304 H P+ D Sbjct: 359 HFPVRSDLRL 368 >gi|188581164|ref|YP_001924609.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] gi|179344662|gb|ACB80074.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] Length = 264 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + D+V LQE+ + Sbjct: 1 MRITTWNVN------------SIKQR----VGHLLGFLDEAKPDVVCLQELKCQDTS--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR A+D + Sbjct: 42 FPR-------EEIEAAGYAVETLGQKAYNGVALLVRAPLQYTQLLRGLPGDAEDEQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + + I+L + + +Y + + L A+ L Sbjct: 92 -RYIEALVHGEGVAPVRIASIYLPNGNPAPGPKYSYKLAFMARLKAHARAL-------MA 143 Query: 201 SLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPND 232 S V+AGDFN R + G D + +P+ Sbjct: 144 SEDALVLAGDFNVIPEPEDAADPAAWTQDALFLPETRRAFRALLAEGFTDGL-RACEPSA 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L F + + C I ID+ ++ A L+ S ++ Sbjct: 203 GLYTF-WDYQAGCWPR---NFGIRIDHLLLSPQAADRLVSASV-------QKHLRGLEKP 251 Query: 293 SDHCPISIDYD 303 SDH P++++ Sbjct: 252 SDHVPVTVELS 262 >gi|126463202|ref|YP_001044316.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17029] gi|126104866|gb|ABN77544.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17029] Length = 339 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 106/348 (30%), Gaps = 74/348 (21%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 E----------MGSYNAVAKVFP------------KNTWCIFYSTERLINHSKRDSNNDI 110 E + + A+ F + I + + D Sbjct: 62 EAPNQSRRRSTVKALETFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDP---Q 118 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A A R +V FS+ EL + +G + V+ +H KS Sbjct: 119 SSAKAPRFDDVFRFDIDVDATPEAIRFSKPPL----ELALRADGHPLRVIGVHAKS--KA 172 Query: 171 DSLENTYSPSCSL-LSQQAQWLKD--WITQKKES----LVPFVIAGDFNRKINYLGNNDD 223 + + + + + Q L + W+ ++ ++ GDFN L + Sbjct: 173 PHGARNPAEAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPG-LDEYEK 231 Query: 224 FWK--------------TIDPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDYFV 261 + + ++ R + + + +D+ + Sbjct: 232 LFGRSGIEIVLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDFIM 291 Query: 262 MDQN----AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 + + + ++ I ++ + +++ SDH P+++D D Sbjct: 292 VSADLAAKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDIDL 339 >gi|154251594|ref|YP_001412418.1| endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] gi|154155544|gb|ABS62761.1| Endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] Length = 231 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 66/194 (34%), Gaps = 44/194 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTS-DYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++SWNI GV R D + + + D DIV QE+ S + Sbjct: 6 LRVLSWNI-----HGGVG-------RDGRFDLARIVRLVERHDPDIVAFQEVDSRG---R 50 Query: 83 VFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAK--DSFSR 139 + I R S D H AV +PL G + D R Sbjct: 51 LDGGAPLSILKEALGEHAAEGRTISAPDGHYGHAV--------ISRFPLSGTRVCDLSFR 102 Query: 140 AG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R A+ +E + ++ HL + L Q+ L + Sbjct: 103 SREPRCAISANIETPWGPLRLVTTHLGLSIWERRL-------------QSSML---VDLA 146 Query: 199 KESLVPFVIAGDFN 212 +E +P ++ GDFN Sbjct: 147 REEKLPCIMMGDFN 160 >gi|150376190|ref|YP_001312786.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150030737|gb|ABR62853.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 242 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 78/259 (30%), Gaps = 50/259 (19%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF---YSTERLINHSKRDSNND 109 D + D++ LQE+ A + + + S + + + + Sbjct: 23 DPARIAAVIAECRPDVIALQEVDVGRA--RTGGIDQAHMIATHLSMDAQFHPALHLEDE- 79 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + + + L+ A S R A+ + ++ G K+ V+ HL Sbjct: 80 -------KYGDAVLTALPMRLIRAAPLPSSGEPRGALWVEIDAAGVKLQVIVTHL--GLR 130 Query: 170 LDSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFN---RKINYLGNNDDF 224 +QA L W+ ++ ++AGD N R +Y Sbjct: 131 GAERL-----------RQATALLGPGWLGAMEQGKTRLILAGDLNATGRSASYRLLARQL 179 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + K ++ + ID+ ++ E++ + Sbjct: 180 -------KDVQLLTGNKPRPTFPSRLPLLR--IDHVLIGDCI----------EVVSCQVH 220 Query: 285 IKSRGKRLSDHCPISIDYD 303 + + SDH P+ + D Sbjct: 221 SSALARSASDHLPLLTELD 239 >gi|34541082|ref|NP_905561.1| AP endonuclease domain-containing protein [Porphyromonas gingivalis W83] gi|34397397|gb|AAQ66460.1| AP endonuclease domain protein [Porphyromonas gingivalis W83] Length = 310 Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 100/302 (33%), Gaps = 71/302 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGSYNAVA 81 +++++++N+ + S N + +Y K ADIV LQE + S + + Sbjct: 47 RIKVMTYNVKGFDFRAHNSENPNPIL----------KYIKGSGADIVCLQEAVLSRKSNS 96 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + T+ + R + S + RK + +L YP+L + Sbjct: 97 RYVGLRTFKKYLPEYRYMELSHARED---------RKGSGLMLLSKYPILDVHRIPYESA 147 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLEN------------------TYSPSC 181 + V+I G+K+ V++ HL+SF D E P+ Sbjct: 148 FNGSTAYTVDIQGRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY 207 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFP 238 +L + QA + +I + ++ GDFN + F Sbjct: 208 ALRAVQADSVSHYI--RCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTGRGPGFT 265 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + K+ ID+ + AY + +S SDH Sbjct: 266 FNQGA---------FKVRIDHILYSSGFLAYNCTVDKSVHA---------------SDHF 301 Query: 297 PI 298 P+ Sbjct: 302 PV 303 >gi|262277234|ref|ZP_06055027.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] gi|262224337|gb|EEY74796.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] Length = 263 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 106/310 (34%), Gaps = 83/310 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + + SWNIN + RT + + +Y +D DI+ QE+ Sbjct: 7 TMIISSWNIN------------SVRIRTEN----IEKYLDKIDPDIIMFQEIKCEDDK-- 48 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138 FP + F+ + N++ + +A+ +KK + + +S+ + Sbjct: 49 ---FPND----FFEKK---NYNCYVFGQKSYNGVAIISKKKLLNID-KSFKDPNKQSRLI 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A ++ + GK + ++ I+L + +++ + Y +WL ++I Sbjct: 98 ------AADIKI--AGKLVKLICIYLPNGNPVNTDKYPYK---------LKWLNNFINFI 140 Query: 199 KESLVPF---VIAGDFN-------------------RKINYLGNNDDFWKTIDPNDSLIR 236 K+ + + +I GDFN ++ + + Sbjct: 141 KKEIHNYDGIIIGGDFNIIPNSNDVGNPEDWGNDALYRLEIRKEFRKILNLGFKDSFRLF 200 Query: 237 FPKEKDSRCN---ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++K RNK ID+F++ + + D + Sbjct: 201 NTEDKQYTFWDYTQGSWQRNKGLRIDHFLITDSICSKIKNVEI-------DKFTRGLNKP 253 Query: 293 SDHCPISIDY 302 SDH PI +++ Sbjct: 254 SDHSPIRVNF 263 >gi|255532876|ref|YP_003093248.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345860|gb|ACU05186.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 282 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 109/325 (33%), Gaps = 77/325 (23%) Query: 2 IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 I+ + +A + C+ + + +R++S+NI + + VK Sbjct: 13 IKAFAVAALLIGTSCSKSKENKTEPETSKETLRVMSYNI-HIGNPPSEA--AGVVK---- 65 Query: 53 DYTLLRQYAKNLDADIVFLQEM-----------GSYNAVAKVFPKNTWCIFYSTERLINH 101 K + D+V LQE+ +A++ N + Sbjct: 66 -LEATANAIKQGNPDLVALQEVDKFTTRSGIDLDQAKKLAELTGMNYY-----------F 113 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVL 160 +K ++ +A+ K Y L ++ + A R + VE NGK+I+ + Sbjct: 114 AKALDRSNGEYGVAILSKFPIKTSSRYSLP--VNAGTGAELRVVGIIQVELPNGKRIYFV 171 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 H D L + A+ L I K+S P ++ GDFN + Sbjct: 172 STHF------DHLAESNRE------LHARELLKAIQPYKDS--PVIVGGDFN-----MPP 212 Query: 221 NDDFWKTIDPNDSLIRFPK-EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 D W I ++ N N IDY ++++ A + +S+ I Sbjct: 213 TSDTWNIIKTEMTMGCTTCPSTFPATNPNTT------IDYLLLNKQASGYFSIKSYQTI- 265 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH PI + + Sbjct: 266 -------AERYA-SDHVPIIAELQY 282 >gi|84386405|ref|ZP_00989433.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84378829|gb|EAP95684.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 448 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 40/296 (13%) Query: 23 KVRLVSWNINTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++N+ L+ + +++ +R ++ Y D + QE Sbjct: 173 SINILTYNVWALNPLGISGIVSRSANERLKQIKDKVKGY------DAIVFQE-------- 218 Query: 82 KVFPKNTWCIFY----STERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKD 135 +F + IF S + + + + + +Q ++ D Sbjct: 219 -LFDNSERSIFLNALKSEYPYQTRVVDRAGSPEDGGVLIVSHWPIEKEVQMTFDQCAGSD 277 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + G A + G + H + + +QQ + ++ +I Sbjct: 278 CLASKGVIYA---KINKGGNPYHIFGTH------PQAWSTKEGRAVR--AQQFEQMRAFI 326 Query: 196 TQKKESL-VPFVIAGDFN-RKINYLGNNDDFWKTIDPND----SLIRFPKEKDSRCNAN- 248 + + P VIAGD N KI YL +D KT+ + + + Sbjct: 327 DAQYINGAEPVVIAGDLNVDKIKYLPEYEDMLKTLVSEEVPRFKSYPYTFDGAVNAWVTD 386 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + K +DY + + S I + + LSDH +S F Sbjct: 387 EEKKQKEYLDYVLYSTSHLSPDSSSSKVIIPRSTNVDLFTKYDLSDHFAVSARLTF 442 >gi|322390045|ref|ZP_08063581.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] gi|321143252|gb|EFX38694.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] Length = 793 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 101/332 (30%), Gaps = 55/332 (16%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 T K+ + S+NI S KN + + DI+ L E Sbjct: 358 AALTQPSEDKLTIASYNIENFSANNA----KNETPEDKVTLIANSFIHEIHNPDIITLIE 413 Query: 74 MGS------------YNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + K+ ++ + + ++I I Sbjct: 414 VQDNNGSVDDGTTSGVESGRKLANRIKELGGKSYE-YTEVAPVDGADGGKPGSNIRLGIL 472 Query: 116 VRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + V + ++ P A + S R+++ + E G+ + Sbjct: 473 YNPERVSLAKKEAATSNEAAQFDKGHLVKNPARIAPNDPSFDHTRKSLAVEFEFKGQPVV 532 Query: 159 VLDIHLKSFCFLDSLENTYSPSC----SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 V+ HLKS D++ P+ QA + ++ + K+ FV+ GDFN Sbjct: 533 VIANHLKSKIGDDAIYGASQPAVEHTLPTREAQASVIHQFVQEGLKQNPKTTFVLTGDFN 592 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + + N+ + + + +D + N + Sbjct: 593 -----DYDFSTTAQILAGNELTNLMAQHDAGDRYSYFYRGSNQVLDNIFISNN----MAA 643 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ E ++ R SDH P+ + DF Sbjct: 644 KARFEPVHINASFMKEHGRASDHDPVLVQIDF 675 >gi|167463375|ref|ZP_02328464.1| hypothetical protein Plarl_12581 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382169|ref|ZP_08056092.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] gi|321153888|gb|EFX46246.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] Length = 247 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 45/259 (17%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---I 110 + Q + AD++ L E+ Y + + + S ++ + + Sbjct: 26 LDRIAQVIEKSQADVIALNEVDKYFSRRSEY--TDQLGWLSERLKLDGIFGAAKTNKVSE 83 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSF-----SRAGNRRAVELLVEINGKKIWVLDIHLK 165 T +R+ +L +P++ K+ R R +E+ + I G+ + + HL Sbjct: 84 ETDCMIREYGNALLS-RFPIVDVKNHNLSVYPIRLEGRALLEVTLLIGGQWLKLYVTHLS 142 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 F+ S++ L I P ++ GDFN W Sbjct: 143 LTPFIQSIQADM------------ILNKIIDDH----HPMILLGDFN-----TWPQSKLW 181 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + + + K C + R ++ +DY + + + + ++ Sbjct: 182 RKVTAKLTDVSHSFRKK-PCLTFPSFRPRVRLDYIFISHHFHI------------SSAEV 228 Query: 286 KSRGKRLSDHCPISIDYDF 304 + SDH P+ F Sbjct: 229 ITEDPAASDHLPLIATLKF 247 >gi|119944778|ref|YP_942458.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] gi|119863382|gb|ABM02859.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] Length = 358 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 104/342 (30%), Gaps = 68/342 (19%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSY 77 ++++ ++N+ N L + + + + + + Y D++ QE+ S Sbjct: 23 RLKIATFNLFNYL--EPPFAYYDFERIYSAEQWAKKQKWITDYVNEFQPDVIGFQEVFSP 80 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------- 130 A+A++ + + F ++ AIA + V + Sbjct: 81 EALAELLREQGYEFFQVVDQ-PEVIDDFICRSPVVAIASKYPIVDIEAVQADTTLALAMG 139 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS-------L 183 L SFSR R + L + +H KS LE+ S S S Sbjct: 140 LKEDFSFSRQVLRATINL---PHIGDCDCYVVHFKS--KRPMLEHEESKSLSGEKNIIEK 194 Query: 184 LSQQAQ---------------WLKDWITQKKESLVPFVIAGDFNRKIN------------ 216 L Q L + I +++E+ +P ++ GDFN + Sbjct: 195 LKAQVAGGWGSTIQRGSEAALLLVNMIARREETGLPMILMGDFNNILADGVLDHLVTDTL 254 Query: 217 ---YLGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYK 268 ++D + + + + L + + +DY ++ Sbjct: 255 RFVSKLDSDAYLEKYCLKDSWDLFQGTENNTEHILRKPTHYFGASSSVLDYILLSCEFDA 314 Query: 269 FLIQESFSEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 F YN D I R +DH + + Sbjct: 315 NYHSSLFEVSEYNTYDRHLINPIFDRDGESTDHGVVLVTLQL 356 >gi|126695849|ref|YP_001090735.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] gi|126542892|gb|ABO17134.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] Length = 281 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 94/305 (30%), Gaps = 69/305 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N RT + + + ++ DI+ LQE KV Sbjct: 3 IATWNVN--------------SIRTR--LSQIIDWINQVNPDILCLQE-------TKVMD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 N + +S + +A+ K + G +S + Sbjct: 40 DN---FPVEPFEKLGYSLEIYGQKSYNGVAIISKIKPENVKKG-FNGCTESNQNSEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWITQKKESL 202 + L+ + I ++++++ + LDS + Y +C L ++ ++++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLDSSKFAYKINWLNC---------LSSFLDEQEKKG 146 Query: 203 VPFVIAGDFNRKINYLGNNDD-------FWKTIDPN-----------DSLIRFPKEKDSR 244 + GDFN + L +D I+ N DS F + Sbjct: 147 ELICLMGDFNVAPSNLDIHDPKKYEGGIMASEIERNALKNVLKKRLIDSFRIFEQNTGHW 206 Query: 245 CN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 L ID+ + + L D R SDH P+ Sbjct: 207 SWWDYRNNGFELNKGWRIDHIYISKELTSKLKSCVI-------DCSPRGNLRPSDHAPVM 259 Query: 300 IDYDF 304 I+ + Sbjct: 260 IELNL 264 >gi|209547425|ref|YP_002279343.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538669|gb|ACI58603.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 242 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 79/266 (29%), Gaps = 62/266 (23%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS--TERLINHSKRDSNNDI 110 D + ADIV LQE+ + + + S + H + Sbjct: 24 DPGRIASVIAEAQADIVALQEVDVLR--RRTGGIDQAHMIASLLEMQAHFHPALSVAEEQ 81 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + A+ ++ PL + R A+ + + + +K+ V++ HL Sbjct: 82 Y-GDAIITALPTGAVKAGPLPSIGEQ------RGAISVEILVGDRKLLVVNTHL------ 128 Query: 171 DSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFN-------RKINYLGNN 221 L +Q L W+ + +P ++ GDFN ++ Sbjct: 129 -GLRGRER------MRQMTTLLNAGWLRGTADEPLPTILCGDFNAIPSSATYRLAARSLK 181 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEI 278 D ++ + P +D+ + + LI + + + Sbjct: 182 D----------------AQRAGNARPRATFPARYPLMRLDHVFVTDD----LIVKQATVL 221 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ + F Sbjct: 222 ENRLARVA------SDHLPLLAEIAF 241 >gi|39422|emb|CAA45501.1| hybrid cereolysin AB [Bacillus cereus] Length = 592 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 119/319 (37%), Gaps = 59/319 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A + Sbjct: 295 TLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVFDNSASDR 348 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + D AI + V +Q + Sbjct: 349 LLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKIQYVFAKG 408 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Q + + Sbjct: 409 CGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEI 461 Query: 192 KDWITQKKESLVPFVIAG-DFNRK-INYLGNNDD----FWKTI-------DPNDSLIRFP 238 +D+I K +V+ G D N IN N+D +KT+ + + Sbjct: 462 QDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYASMFKTLHASIPSYTGHTATWDAT 521 Query: 239 KEKDSRCN-------------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ N A+K+ N I+ V+ + ++ + + Y++ Sbjct: 522 TNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYDDY-- 579 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH P++ Sbjct: 580 -------SDHYPVAATISM 591 >gi|325474697|gb|EGC77883.1| endonuclease/exonuclease/phosphatase [Treponema denticola F0402] Length = 342 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 89/264 (33%), Gaps = 55/264 (20%) Query: 66 ADIVFLQEMGSYNAVA---KVFPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ LQE+ S + K+ P N + +F + + + + + + Sbjct: 104 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFI-----PPQNGGAFSTALLSKFPITET 158 Query: 120 NVRVLQQSY-PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V + L ++ R GN ++ +L++H KS DS ++ Sbjct: 159 KVFNIYSGKRSLRPLIETRIRIGN--------STGDNELVLLNVHWKSK-VGDSDTDSIR 209 Query: 179 PSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDS 233 QQ + + + K S PF+I GDFN+ + + L D+ W ++ Sbjct: 210 R------QQEEQAYKRLKELKASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNI----EA 259 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---------------AYKFLIQESFSEI 278 +E + + + ID+F N K L S Sbjct: 260 YRAAAQEGNQPEGSYFYKESWEGIDHFFYSDNLSDGKNFDLSFFCVINLKPLTDTSGKPD 319 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y+ K SDH PI I Sbjct: 320 KYSVYSGKGY----SDHLPIGIIL 339 >gi|152982053|ref|YP_001352165.1| hypothetical protein mma_0475 [Janthinobacterium sp. Marseille] gi|151282130|gb|ABR90540.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 328 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 111/322 (34%), Gaps = 63/322 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSY 77 Q++R ++N+ L+ G +++ + + +Y + Q LDAD++ LQE+ S Sbjct: 3 QELRFATFNVCNLAL-PGTKYYEDQIPYSAEEYDAKISWIAQQLDRLDADVIGLQEIFSQ 61 Query: 78 NAVAKVFPK-----NTWCIFYSTERLINHSKRD----SNNDIHTAIAVRKKNVRVLQQSY 128 A+ V K + + Y + +H S + V ++ L + Sbjct: 62 QALTDVLAKTQKYRDAQQLGYDPDPAADHLTPSVALISRLPVLAGATVFRELPHHLSITL 121 Query: 129 PLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + R + ++ NG + V HLKS L + + L Q Sbjct: 122 PGVAHP---VTHFTRPILHAQIQAANGLAVDVFVCHLKS-----KLPDYRNDLEDELPDQ 173 Query: 188 --AQWLKDWITQ--------------KKESLVPFVIAGDFNR--------------KINY 217 L+ I + K+ P V+ GDFN K Sbjct: 174 TGIAMLRSLIRRGTDALGLRHLLSDIKQLQRKPIVVMGDFNDVADAIPTQMVMGLGKYPL 233 Query: 218 LGNNDDFWKT--IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQE 273 G +D +++ I ++R + + + ID+ ++ + N Sbjct: 234 NGVDDRLFESYRIQSRRDVLRDVGYT------HIHDNSYETIDHILVSEEFNPGSPGALG 287 Query: 274 SFSEILYNEDDIKSRGKRLSDH 295 E++Y D + R SDH Sbjct: 288 EVIEVMYLNDHMTFRQAYASDH 309 >gi|284039823|ref|YP_003389753.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283819116|gb|ADB40954.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 266 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 96/297 (32%), Gaps = 73/297 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----- 75 A+ ++++++NI+ + S D + + D+V LQE+ Sbjct: 29 AKSLKVMTYNIHHCNPPSAGSKI---------DVEAIARVITAEKPDLVALQEVDVNTER 79 Query: 76 ------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +A++ N F+S + I+H D +AV + + + Sbjct: 80 SGKGLNQAKELARLTGMN---FFFS--KAIDHQGGD------YGVAVLSRFPILDSTRFI 128 Query: 130 LLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L D R + VE GK++ HL D E Q+ Sbjct: 129 LP--IDPTIGGETRTIAAITVEPTKGKRMIFASTHL------DLKEPNR-------LTQS 173 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + I + +P ++AGDFN + + D F + S C Sbjct: 174 ELI---IRHFGATDLPVILAGDFN-----AQTDSKVIQLFDQT-----FVRSCQS-CAPT 219 Query: 249 KNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++N ID+ ++ Q + Y SDH P+ ++ Sbjct: 220 IPVKNPNRAIDFVMVKQGGSLKSTSTRVVDEQYA-----------SDHLPVVVELKL 265 >gi|289665777|ref|ZP_06487358.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 303 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 93/292 (31%), Gaps = 60/292 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN----LDADIVFL 71 +++ +++ LV+ N++ D+ R Y L D++ L Sbjct: 40 PSSTAPREMTLVTLNLHH----------------DREDWPARRAYIAKELKQLAPDVIAL 83 Query: 72 QEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 QE+ +A+ + F S + + + + A+ R+ + Sbjct: 84 QEVIERRGSVENQAAWLARKLGYDY--TFASVDPVGAPKRYGN------ALLSRRNVLAT 135 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 Q+ L R A L V+++G+ + V HL E T + + Sbjct: 136 HQRLLQPLDDY--------RVAAHLQVDVDGQPVNVYVTHL--------NERTDARGTAT 179 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +Q L D++ P VIAGDFN + + K + + + Sbjct: 180 RKRQVTDLLDFVAS-NSEQAPVVIAGDFN-TAADTLDLEALRKGYGDSYGSVHRNSDATV 237 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ QN + Y + G+ SDH Sbjct: 238 STLNMQVFDKPARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDH 283 >gi|254561142|ref|YP_003068237.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4] gi|254268420|emb|CAX24377.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens DM4] Length = 264 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 96/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + D+V LQE+ +A Sbjct: 1 MRITTWNVN------------SIKQR----VGHLLGFLDEAKPDVVCLQELKCQDAS--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR A+D + Sbjct: 42 FPR-------EEIEAAGYAVETLGQKAYNGVALLVRAPLQYTQLLRGLPGDAEDEQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + V I+L + + +Y + + L A+ L Sbjct: 92 -RYIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMARLRTHARAL-------MT 143 Query: 201 SLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPND 232 + V+AGDFN R + G D + +P+ Sbjct: 144 TEEALVLAGDFNVIPEPEDAADPTAWTQDALFLPETRRAFRALVAEGFTDGL-RACEPSA 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L F + + C I ID+ ++ A L+ S L ++ Sbjct: 203 GLYTF-WDYQAGCWPR---NQGIRIDHLLLSPQAADRLVSASVQRHL-------RGLEKP 251 Query: 293 SDHCPISIDYD 303 SDH P++++ Sbjct: 252 SDHVPVTVELS 262 >gi|187940074|gb|ACD39207.1| hypothetical protein PACL_0419 [Pseudomonas aeruginosa] Length = 368 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 93/298 (31%), Gaps = 38/298 (12%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ ++ + S A + L+SWN L + + L + A AD Sbjct: 9 LLLGTVLVSSLSSAADLTLMSWNAMRLG------------QGGEKSFPALAEVAGK--AD 54 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +V +QE+ + + K+ + L++H+ + A +R+ V + Sbjct: 55 LVAIQEVMNEEGLTKLEAELEKRTGEQWSTLVSHAVGSRSYKELYAFLMRESVVVYEDGA 114 Query: 128 YPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D F R R + +G V IH+ P L Sbjct: 115 VVYMDRGDRFIREPLSARFKS----KRDGTLFAVASIHVLYG----KGPQDREPEVRELE 166 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 WL+ + P ++ GDFN ++ + + + + K + Sbjct: 167 SYWAWLESIYPE-----TPVMLVGDFNMPPSHPA-----FSGLSQHAT-PLITKG--ATT 213 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDY 302 + + D + + L + + K +SDH P+ + Sbjct: 214 LSAREGLYANLYDNIWVSRTHRLKLDNAGIMDYPRMIGWSHEKSRKHVSDHAPVFVTL 271 >gi|152974643|ref|YP_001374160.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023395|gb|ABS21165.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 790 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 93/319 (29%), Gaps = 59/319 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 +V + ++N+ S + + + L Y+ + DI+ +QEM N Sbjct: 489 GRVTVATYNMENFSANQKET--------SDEKVKALA-YSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + ++ + + L N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVQAIHGPKYE-YVEVAPLNNQDGGAPGANIRVGFFYNSSR 598 Query: 121 VRVLQQS-----YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V++ Q P +D+ R+ + G+ + V+ HL S Sbjct: 599 VKLADQPKLLETNPTRIGQDNPLFESTRKPLAAEFTFQGQHLVVISNHLNSKIGDAPPFG 658 Query: 176 TYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFN----RKINYLGNNDDFW 225 + P ++ L + QK+++ P V+ GD N K D Sbjct: 659 SIQPLVWKSEEKRVQLAQEVNRFVKGIQKRDANAPVVVVGDMNDFEFSKPLQALKGDTLQ 718 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 ++ R+ + +D+ ++ N I + ++ Sbjct: 719 NMLETVSKENRYTYIHEGNAQV---------LDHILVTNNIANHTIVDPVHLNT----NM 765 Query: 286 KSRGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 766 MKEHGRVSDHDPVLAQIDL 784 >gi|297571824|ref|YP_003697598.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] gi|296932171|gb|ADH92979.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] Length = 290 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 86/283 (30%), Gaps = 59/283 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 + D++ LQE+ + + + + + + AIAV+K Sbjct: 23 IAVVSPDVLLLQEVRAPEELVPELIGENYTVIQQACDIKGRAG--------VAIAVKKGV 74 Query: 120 ----NVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 L P L + D + + V+I K + +L S Sbjct: 75 DVGRISIGLGSDLPDCEPDTDALASWDRPAEPPVDTGRWIEVDIPAYKTTFVSAYLHSGT 134 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 D + + L + L T + E L ++AGDFN I + + WK+ Sbjct: 135 ATDQAKMDAKYA--HLDRVTTRLAQLRTNRSEELPHILVAGDFN--IVHTERDITNWKSN 190 Query: 229 DPNDSLIRFPKEKDSRCN--------------------------ANKNLRNK--IPIDYF 260 + + P+ K N IDY Sbjct: 191 HNKTAGVLDPEIAYVDKWTETMGYIDVQRYLIGDEQAEYTWWSQRGKAFDNNVGWRIDYH 250 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++D + + S D +S +R SDH P+ + YD Sbjct: 251 LVDPDLAQR--AHSLRI-----DRAESYDQRWSDHAPLIVTYD 286 >gi|220923190|ref|YP_002498492.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] gi|219947797|gb|ACL58189.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] Length = 263 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 97/309 (31%), Gaps = 75/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + K D+V LQE V + Sbjct: 1 MRITTWNVN------------SVKQR----LGHLLAFLKEASPDVVCLQE---LKCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----R 139 FP I + A + +Q PL + Sbjct: 42 FP----------RTEIEEAGYVVATHGQKAF---NGVALLTRQPLPLRDVRRGLPGDPED 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQK 198 R +E ++ + V I+L + + + + Y + L A+ L + Sbjct: 89 GQARY-IEAVIPTATATLRVASIYLPNGNPIGTPKYDYKLAFLRRLLLHARAL------R 141 Query: 199 KESLVPFVIAGDFN---RKINYLGNNDDFWKTI--------------DPNDSLIRFPKEK 241 ++ V+AGD+N I+ + + +R E+ Sbjct: 142 EKE-EVLVLAGDYNVIPEPIDVANPEAWTGDALFLPESRAAFRMLLNEGFTDALRACDER 200 Query: 242 DS-----RCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A RN I ID+ ++ A L+ S + L D + SDH Sbjct: 201 PGLYTFWDYQAGAWSRNLGIRIDHLLLSPQALDRLVSASVQKHLRGLD-------KPSDH 253 Query: 296 CPISIDYDF 304 P++++ D Sbjct: 254 VPVTVELDL 262 >gi|257056393|ref|YP_003134225.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017] gi|256586265|gb|ACU97398.1| metal-dependent hydrolase [Saccharomonospora viridis DSM 43017] Length = 286 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 102/318 (32%), Gaps = 71/318 (22%) Query: 6 VLALVFFLVPCTASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 + L L + A+ +R++S+NI+T +GV SD + Sbjct: 16 LTLLTAMLTVPGTASAEPRHGPRVLRVMSYNIHTGIGTDGV-----------SDLGRIAS 64 Query: 60 YAKNLDADIVFLQEMGSYNA-----------VAKVFPKNTWCI-FYSTERLINHSKRDSN 107 ++ D D+V LQE+ + A +A++ + + Y + +R Sbjct: 65 VIRDADVDVVALQEVDVHWADRSDYVDQATELARLTDMSVYFAPIYDLDPEPGREER--- 121 Query: 108 NDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHL 164 +AV R + L + + E++V + G + V + HL Sbjct: 122 --RRYGVAVLSRHPVLSATNHEISRLSTVEPGAEPEPMPGFAEVVVSVRGLPVHVYNTHL 179 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 Y P ++ S+Q + D I ++ ++ GDFN + Sbjct: 180 -----------DYRPDPTVRSRQVTEMLD-ILRQDPPRAHQLLLGDFNAEPAAPELA-PL 226 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 ++ + + ++ + IDY + + Sbjct: 227 FERLRDA----WGTRG-GGLTYPAEDPVKR--IDYITAGGG---------VRVLNASVPA 270 Query: 285 IKSRGKRLSDHCPISIDY 302 +++ SDH P+ Sbjct: 271 VEA-----SDHRPVVATL 283 >gi|114327927|ref|YP_745084.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316101|gb|ABI62161.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 74/306 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 V++ +WN+N++ ++EG L + + DI+ LQE+ A Sbjct: 2 PVKIATWNVNSIRQREGHVL----------------SWLERNQPDILLLQEIKCETAA-- 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAG 141 FP + + + + +AV + V Q++ P L D+ +R Sbjct: 44 -FPAQAF-------AKLGYQAEAVGQKAYNGVAVLSRVPFEVTQRTLPGLPPDDAQARYI 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 RA+ ++ +++L + Y L+Q A L Sbjct: 96 EIRALNTIIG---------NLYLPNGNSGGEAGYAYKLGWMEHLAQHAASL-------LA 139 Query: 201 SLVPFVIAGDFN--------------------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + ++AGD+N R W + +R + Sbjct: 140 AGEDLILAGDYNVCPTEEDYAPGALPPEDALLRPETRARFRSLLWLGLTDAVRAMRPSGQ 199 Query: 241 KDS--RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + A R++ ID+ ++ + LI+ D ++ + SDH P Sbjct: 200 IYTFWDYQAGAWPRDRGLRIDHALLSSRMAERLIEA-------LPDRMERDQPQPSDHVP 252 Query: 298 ISIDYD 303 + I ++ Sbjct: 253 VIISFE 258 >gi|94309326|ref|YP_582536.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93353178|gb|ABF07267.1| Putative endonuclease/exonuclease/phosphatase protein [Cupriavidus metallidurans CH34] Length = 251 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 106/291 (36%), Gaps = 61/291 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 K+R+V++NI +GV + + +R +++DADIVFLQE+ Sbjct: 2 KLRVVTYNI-----HKGVKGFTGKPR-----IQSVRTGLQSMDADIVFLQEVQDRNDRLI 51 Query: 80 VAKVFPKNTWCI-FYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A++F + + + +T+ + + + + H A+ ++ ++ ++ L D Sbjct: 52 AAELFDPDHTQLNYLATDAYPHSVYGRNAVYDHGHHGNAILSRHPILMSEN---LDISDH 108 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIH--LKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R R + + +ING + ++ +H L + + +Q L + Sbjct: 109 --RFEQRGLLHAVADINGVEAHLICVHFGLFAGSRV---------------RQTTALVER 151 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + P VIAGDFN D I + + K+ R + + Sbjct: 152 VRSVVPADAPLVIAGDFN---------DWNHKLDSKICNTLNAVESANAKNGRIHTFPSH 202 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D ++ + E + SDH P+ + Sbjct: 203 MPWWQLDRIYARGFEFERTQALTGRE-----------WAQRSDHVPLMAEL 242 >gi|316933979|ref|YP_004108961.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315601693|gb|ADU44228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 263 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 102/305 (33%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + K+ +D+V LQE+ V + Sbjct: 1 MRIATWNVN------------SVRQR----LDHLLTWLKDSQSDVVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K L+++ P L D A R Sbjct: 42 FPR-------EPIEALGYNVVTHGQKTFNGVALLSKYP--LEEANPGLAGDDGDVHA--R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + + S + Y S L+D+ Q+ + Sbjct: 91 F-LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLRTEE 143 Query: 204 PFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN D ++ +R + + Sbjct: 144 PLILAGDFNVIPQPGDVHNPAAWTE-DALFRPETRESFQALLGLGFTDALRATTDAPGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVW 255 Query: 300 IDYDF 304 D D Sbjct: 256 ADLDL 260 >gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 372 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 97/314 (30%), Gaps = 78/314 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE------- 73 + VRL+++N++ + +S R + D++ +QE Sbjct: 103 SSSVRLMTYNVHHFKQFGS---EVDSNARNN-----ILDLINEEQPDVIAIQEFLTRKKG 154 Query: 74 -MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + S N + K+ + + ++ N+ IA+ K V + L Sbjct: 155 KLKSENNIRKILGTEDYYFYSTS----------GNDYESMGIAIFSKLPIVNKGKLTELD 204 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF--LDSLENTYSPSCSL------- 183 K S + + + V+ N K + IHL S F +D + Sbjct: 205 PKGSNN------GLWIDVKKNNKVFRIYTIHLASIAFAPVDYYYFKRISNMKTEDEDIKH 258 Query: 184 -------LS-------QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 L +Q + LK + PFVI GDFN N I Sbjct: 259 GRRILSRLKSAFVRRAKQVEILKSYTD---SCKTPFVIMGDFNDTPVSYSVN-----QIS 310 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + K N + N IDY + ++ ++ K Sbjct: 311 KDLKNSFIEKGVGIGRTYNGDFPNFQ-IDYILTTKD--------------FDIHTYKIIK 355 Query: 290 KRLSDHCPISIDYD 303 K SDH P+ +D Sbjct: 356 KAYSDHYPVRVDVS 369 >gi|78046289|ref|YP_362464.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034719|emb|CAJ22364.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 287 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 102/318 (32%), Gaps = 54/318 (16%) Query: 1 MIRKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++R+ + + A A +R++S+N+ V + KR + Sbjct: 8 VLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAM 60 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 K D+ QE+ S A + R +R ++D H + Sbjct: 61 VALIKQTHPDVFGTQELVSEQAAFLAEQLPDY-------RWFGQGRRGDDSDEHMGVFYD 113 Query: 118 KKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 + ++V++ P ++ R A L E + + ++ + H + Sbjct: 114 ARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSRFYLFNTHFP---Y 170 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFWK 226 D E S L+ + L VP V+ GDFN KI Y Sbjct: 171 RDEDEPARERSARLILSRIAQLPA--------TVPVVLTGDFNSDPDKITYP-------- 214 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 +L ++ ++ + N D+ +++ + D + Sbjct: 215 ------TLTAVLRDARAQASKRSGPEN-TFQDFTTHPTRRIDWILYRGLRPTRFATLDDR 267 Query: 287 SRGKRLSDHCPISIDYDF 304 G SDH P+ ++D+ Sbjct: 268 PGGILPSDHYPVMAEFDW 285 >gi|330504967|ref|YP_004381836.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328919253|gb|AEB60084.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 363 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 44/313 (14%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYTL-LRQYAKNL---DADIVF 70 Q +++++WN+ L+ + + +R ++ D L L + + L D+V Sbjct: 52 GQALKVMTWNVQYLAGKRYVFWYDLPSGDGPDERPSSEDLALTLNEVVRVLRAEQPDVVL 111 Query: 71 LQEMGSYN---------AVAKVFPKNTW----CIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ A+ + + + FY + H + + + R Sbjct: 112 LQELHDNAKASDHQDQLALLQARLGDLYPCSSQAFYWKAGFVPHPRILGSVGMKLGTLSR 171 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + R + P+L A + +RA+ + G+++ ++ H +F + Sbjct: 172 FQIARAERLQLPMLEADPLSRQFQLKRALLVSYLPIRGGEELVAINTHFDAFAQGQN--- 228 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYL--GNNDDFWKTID 229 + +Q Q D + Q + + +V+ GD N + +L G + + Sbjct: 229 -------TMQRQVQMTDDLLQQLQGTGKTWVLGGDLNLLPPGQFQHLPEGQRSWYAADSE 281 Query: 230 PNDSLIRFPKE---KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 D R+P + + P D + + S + Sbjct: 282 LQDLARRYPMIPSLQQASGAEQAQWYTHSPNDPAAHGPDRTLDYLFYSPRLTPLASQVRQ 341 Query: 287 SRGKRLSDHCPIS 299 +SDH P+ Sbjct: 342 HDTLSISDHLPVI 354 >gi|260769666|ref|ZP_05878599.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972] gi|260615004|gb|EEX40190.1| hypothetical protein VFA_002724 [Vibrio furnissii CIP 102972] Length = 322 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +VR + N+ N L+ + N ++T L Q L+AD++ QE+ S +A Sbjct: 2 QVRFATANLFNYLAPPNAFYEFNNIYEQTQWQQKQRWLSQKLTALNADVIGFQEVFSPHA 61 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + F + + S + IA R V L G F R Sbjct: 62 LRDQVAALGYPYFEVIDT-PHVSDDYIYSSPVVGIASRFPLSEVAAVETSLDGF--HFHR 118 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF--------------CFLDSLENTYSPSCSLLS 185 R + ++ V +H KS + L+ + + Sbjct: 119 KPLRATLN---HPALGQVDVYVVHFKSQRPMLHEPIGDTLVDAWQQELQGRWQSAMQR-G 174 Query: 186 QQAQWLKDWITQKKES-LVPFVIAGDFNRKIN 216 Q+A L I Q+K+ P V+ GDFN+ ++ Sbjct: 175 QEAHLLHQAIVQRKQQRQHPVVLMGDFNQVLS 206 >gi|255532422|ref|YP_003092794.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345406|gb|ACU04732.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 312 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 93/306 (30%), Gaps = 76/306 (24%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P K++++++NI S D + K D D+V LQE+ Sbjct: 65 PPVQVTGAKIKVMTYNI--------HIGNPPSKPAGIVDLPAIAAVIKAQDPDLVALQEV 116 Query: 75 -----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +A++ N + T+ + + + AV + + Sbjct: 117 DVNTNRSGTSLDEAKELARLTGMNYFY----TKAIDYDGGQFGD-------AVLSRFPIL 165 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + Y L R + VE G++ HL ++ + + Sbjct: 166 ESKRYELPVTAKLGGE--TRSVALITVEKEGQRFLFASTHL---------DHLTAEDNRM 214 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L QA L + +P +IAGDFN +N L +E Sbjct: 215 L--QATELVKIVKTFT---LPLIIAGDFN---ATPMSN-----------PLTILRQELSW 255 Query: 244 RCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 C ++ L IDY +M E F+ + Y + SDH P+ Sbjct: 256 GCKSSCPLTFSAQKPGSTIDYVMMRP-------AEKFNVLSY----VTVNESYASDHLPL 304 Query: 299 SIDYDF 304 + Sbjct: 305 VTEIQL 310 >gi|34498730|ref|NP_902945.1| sphingomyelinase/beta-hemolysin [Chromobacterium violaceum ATCC 12472] gi|34104581|gb|AAQ60939.1| probable sphingomyelinase/beta-hemolysin [Chromobacterium violaceum ATCC 12472] Length = 510 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 45/328 (13%) Query: 2 IRKYVLALVFFLVPCTASVA---QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ + L L AS A + ++L +WN L + + ++R L Sbjct: 1 MKAWRFLLCAALSLPAASHAADPEDLKLATWNAMLL--PQALYPNYGQMRRVE-----LM 53 Query: 59 QYAKNLDA-DIVFLQEMGSYNAVAKV-------FPKNTWCIFYSTERLINHSKRDSNNDI 110 A L A D++ QE+ A K+ FP T I + + + Sbjct: 54 AAAPILQAQDVLVFQELQDNAASDKLLALLKPRFPYQTPVIGRAQQGWDGTEGWNGMKPE 113 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK---SF 167 +A+ + V ++ Y S+ + + +NG+ V+ HL+ S Sbjct: 114 DGGVAIASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQSEDSG 173 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWK 226 C + Q + + W+ + ++AGD N Sbjct: 174 CANHADIGVRQA-------QLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLD 226 Query: 227 TIDPNDSLIR-FPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAY-------KFLI 271 + + P D+ N R +DY + + + L Sbjct: 227 ILQAGEPRYAGMPHSFDTAGNGIALERYGARGGDAPEYLDYILTLKGHRQPAAWHNQALD 286 Query: 272 QESFSEILYNEDDIKSRGKR-LSDHCPI 298 S + ++ SDH P+ Sbjct: 287 APSPQWTAQSAVAKQTYAYADFSDHYPV 314 >gi|332559251|ref|ZP_08413573.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N] gi|332276963|gb|EGJ22278.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides WS8N] Length = 339 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 105/350 (30%), Gaps = 78/350 (22%) Query: 21 AQKVRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 A+ +R+ ++N+ L +S +R L LDAD + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRPDNELSGRYEITRRNQ--IESLGIVFTALDADAIM 59 Query: 71 LQE----------MGSYNAVAKVFP------------KNTWCIFYSTERLINHSKRDSNN 108 + E + + A+ F + I + + D Sbjct: 60 VIEAPNQSRRRSTVKALETFARTFGLRASHAVMGFPSETEQEIALLYDPSRIEAHHDP-- 117 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A A R V FS+ EL + +G + V+ +H KS Sbjct: 118 -QSSARAPRFDEVFRFDIDVDATPEAIRFSKPPL----ELALRADGHPLRVIGVHAKS-- 170 Query: 169 FLDSLENTYSPSCSL-LSQQAQWLKD--WITQKKES----LVPFVIAGDFNRKINYLGNN 221 + + + + + Q L + W+ ++ ++ GDFN L Sbjct: 171 KAPHGARNPAEAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPG-LDEY 229 Query: 222 DDFWK--------------TIDPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDY 259 + + + ++ R + + + +D+ Sbjct: 230 EKLFGRSGIEIVLGLEEPPELRLHEPHARMALTQKVGIQPSSARFWLAPEQQYFEALLDF 289 Query: 260 FVMDQN----AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + ++ I ++ + +++ SDH P+++D D Sbjct: 290 IMVSADLAAKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDIDL 339 >gi|255590873|ref|XP_002535386.1| conserved hypothetical protein [Ricinus communis] gi|223523279|gb|EEF26997.1| conserved hypothetical protein [Ricinus communis] Length = 249 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 85/269 (31%), Gaps = 42/269 (15%) Query: 56 LLRQYAKNLDADIVFLQEMG---SYNAV--------AKVFPKNTWCIFYSTERLINHSKR 104 L+Q DAD+VFLQE+ A K +P +++ E H+ Sbjct: 2 ALKQAIGLFDADVVFLQEVQGKHDLKAAKYGAEHLGQKHWPAAAQHEYFAGESRHLHAAY 61 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIH 163 N N + +D A R + +++ + +H Sbjct: 62 GMNAVYDHG---HHGNALLSAFPIASQANRDVSDHAYEQRGILHCVLDTPAGPVHCYVVH 118 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNN 221 L F S +Q Q L + + + P VIAGDFN R Sbjct: 119 L--GLFEGSRR-----------RQTQALIAAVKESAPNGEPVVIAGDFNDWRNTLSAELY 165 Query: 222 DDF-----WKTIDP-NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + I+ N +L ++ + + + +F +D+ + ++ Sbjct: 166 NALGVVEAFDEIEGSNTALGEIMRKLRRKSSIVPARTFPAALPFFRLDRIYVRGFKVDTA 225 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + S +LSDH PI Sbjct: 226 EVMH------GSLWAKLSDHAPIVASLTL 248 >gi|156086334|ref|XP_001610576.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis T2Bo] gi|154797829|gb|EDO07008.1| endonuclease/exonuclease/phosphatase family protein [Babesia bovis] Length = 319 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 118/328 (35%), Gaps = 62/328 (18%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 S Q V+++S+N+ L + L + R + + D DI+ LQE+ SY Sbjct: 2 SALQPVKILSYNVQGL---PSLLLPIADLDIRMDHIANFISSLFQKYDVDIMVLQEVFSY 58 Query: 78 NAVAKV------FPKNTWCIFYSTERLINH-------SKRDSNNDIHTAIAVRKKNVRVL 124 + K+ ++T I + + N + + + I + I + ++ V Sbjct: 59 SLYNKIKDALRGIAEDTGII---SRPVSNSVLMSCLDTLLSTFSFITSGIVIFSRHPIVY 115 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 ++ L + R + AV + +NG + V+ HL+S + + + Sbjct: 116 KERL-LFSNGFNAERYAGKGAVAARISVNGNLLDVIGTHLQS--------DEGEDAQEIR 166 Query: 185 SQQAQWLKDWI------TQK---KESLVPF---VIAGDFNRKINYLGN---------NDD 223 ++Q L +WI ++ + +P+ V+AGD N ++ ND Sbjct: 167 NKQLIELAEWIGINPLEDERAIAERDSLPYVPMVLAGDLNCSLDSETERFSDVVAALNDK 226 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNA----YKFLIQESFSE- 277 T N + + C N DY + + + + +I++ Sbjct: 227 LEDTFGYNQPEPTYSTLTNDFCAFQNNPNVFNHVYDYILKNHESTLLEAQRVIKDKLETA 286 Query: 278 ------ILYNEDDIKSRGKRLSDHCPIS 299 ++D + +SDH PI Sbjct: 287 FVLPVCDEDDDDCVDPEMYNVSDHYPII 314 >gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] Length = 253 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 90/287 (31%), Gaps = 46/287 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-VA 81 ++R+ ++NI + R +RQ L AD+VFLQE+ N A Sbjct: 5 RLRVATYNI-------HKGVVPGPSLRRRPMVKEMRQRLHELQADVVFLQEVQGQNNRFA 57 Query: 82 KVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K F P + + + + + + + N + Q + +D Sbjct: 58 KRFAQWPADPQAQYLALDPESSRRFQAVYGLNARYLHGHHGNALLSQFPILSIENRDFSD 117 Query: 139 RAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 RR V ++++ + + IH S + +QA L DWI Sbjct: 118 HVFERRGVLHCVLQMGERAVHCFVIH--------FGLFARSRA-----RQAGALIDWIRA 164 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + P +IAGDFN D + + + + Sbjct: 165 EVPPGAPLLIAGDFN---------DW------QDALSRLLVERLGVYEVLDSARTFPALM 209 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 MD+ + E+ + RLSDH P+ D Sbjct: 210 PCLRMDRIYVRGFAVETAQVLR------GLSWARLSDHAPVVADLTL 250 >gi|306812808|ref|ZP_07447001.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101] gi|305853571|gb|EFM54010.1| hypothetical protein ECNC101_12867 [Escherichia coli NC101] Length = 253 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAVLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|268680126|ref|YP_003304557.1| endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum DSM 6946] gi|268618157|gb|ACZ12522.1| Endonuclease/exonuclease/phosphatase [Sulfurospirillum deleyianum DSM 6946] Length = 310 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 94/315 (29%), Gaps = 70/315 (22%) Query: 25 RLVSWNINTL-SEQEGVSLWKNSVKRT---------TSDYTLLRQYAKNLDADIVFLQEM 74 ++ ++NI L + + +K T + Q +++AD++ L E+ Sbjct: 18 KVATYNIENLFDATKNGNEYKEYSPNTKHGWNEAMVERKIAHIAQVIGDINADVIALAEV 77 Query: 75 GSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + ++ + + ++ R L +P+ Sbjct: 78 ENKAILERLNNALGAKKYPYLFYPKKKE-----------------RVSIESALLSRFPIA 120 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 F + R + ++I +LD+++ + E+ + L Sbjct: 121 QTDSLFMKDQPRGIHRITLKIEQN---LLDVYINHWPAHKEKEDERLVYATTLKN----- 172 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEKDSRCNA 247 + KE F++ GDFN + D + + S + D N Sbjct: 173 ----SLLKEKDKAFILLGDFNSP-YQVQKEDWGLGFVTVLGVGDKSAPLYNTWYDLPQNE 227 Query: 248 NKNLRN---KIPIDYFVMDQNAYK----FLIQESFS--EILYNEDDI------------- 285 + K +D+ V+ Y S E Y D Sbjct: 228 RYSHSYGKQKTALDHIVIAPTLYDAKGIEYKANSLKRFEAPYMLDVKGNPKRWQISDRGK 287 Query: 286 -KSRGKRLSDHCPIS 299 K G+ SDH P++ Sbjct: 288 GKHLGEGYSDHFPVT 302 >gi|326318344|ref|YP_004236016.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375180|gb|ADX47449.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 252 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 73/209 (34%), Gaps = 55/209 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +R+ ++NI +GV + + L + LDADIV LQE+ Sbjct: 10 AGILRIATYNI-----HKGVQGLGPAR---RLEIHNLGHAVEQLDADIVCLQEV------ 55 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIH--------------TAIAVRKKNVRVLQQ 126 KV R H R A ++ L Sbjct: 56 RKV-----------HRRGAQHFPRWPELPQAEFLAPEGYEAVYRTNAFTRHGEHGNALLT 104 Query: 127 SYPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +P++G + S R R + + VE+ G+++ + +HL S Sbjct: 105 RWPVIGHQHEDMSDHRFEQRGLLHVEVEVQGRRVHAIVVHL--GLIPGSRV--------- 153 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q L+ ++ ++ P ++AGDFN Sbjct: 154 --RQVAQLQRFVAREVPDGAPLLVAGDFN 180 >gi|241663220|ref|YP_002981580.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] gi|240865247|gb|ACS62908.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] Length = 269 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 92/316 (29%), Gaps = 87/316 (27%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L+E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129 E+ P + + + ++ + + +A+ + Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYTSLFTGQKTYNGVAILSRKASVPEGRDVVKN 88 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + G D R V +++G + V+ ++ + LDS + Y + + Sbjct: 89 IPGFTDDQQRI-----VAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLE 137 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRC- 245 L+ W+T + + ++ GDFN +D + + + F + + Sbjct: 138 ALQAWLTSEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLV 197 Query: 246 ----------NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ ID+ ++ K D + Sbjct: 198 DAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVP 250 Query: 287 SRGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 251 RTWEQPSDHTPVVAAL 266 >gi|240138546|ref|YP_002963018.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] gi|240008515|gb|ACS39741.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] Length = 264 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 96/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + D+V LQE+ +A Sbjct: 1 MRITTWNVN------------SIKQR----VGHLLGFLDEAKPDVVCLQELKCQDAS--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR A+D + Sbjct: 42 FPR-------EEIEAAGYAVETLGQKAYNGVALLVRAPLQYTQLLRGLPGDAEDEQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + V I+L + + +Y + + L A+ L Sbjct: 92 -RYIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMARLRSHARAL-------MT 143 Query: 201 SLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPND 232 + V+AGDFN R + G D + +P+ Sbjct: 144 TEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPETRRAFRALLAEGFTDGL-RACEPSA 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L F + + C I ID+ ++ A L+ S L ++ Sbjct: 203 GLYTF-WDYQAGCWPR---NQGIRIDHLLLSPQAADRLVSASVQRHL-------RGLEKP 251 Query: 293 SDHCPISIDYD 303 SDH P++++ Sbjct: 252 SDHVPVTVELS 262 >gi|163851383|ref|YP_001639426.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|163662988|gb|ABY30355.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] Length = 264 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 96/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + D+V LQE+ +A Sbjct: 1 MRITTWNVN------------SIKQR----VGHLLGFLDEAKPDVVCLQELKCQDAS--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR A+D + Sbjct: 42 FPR-------EEIEAAGYAVETLGQKAYNGVALLVRAPLQYTQLLRGLPGDAEDEQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + V I+L + + +Y + + L A+ L Sbjct: 92 -RYIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMARLRSHARAL-------MT 143 Query: 201 SLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPND 232 + V+AGDFN R + G D + +P+ Sbjct: 144 TEEALVLAGDFNVIPEPEDAADPTVWTQDALFLPETRRAFRALLAEGFTDGL-RACEPSA 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L F + + C I ID+ ++ A L+ S L ++ Sbjct: 203 GLYTF-WDYQAGCWPR---NQGIRIDHLLLSPQAADRLVSASVQRHL-------RGLEKP 251 Query: 293 SDHCPISIDYD 303 SDH P++++ Sbjct: 252 SDHVPVTVELS 262 >gi|120553053|ref|YP_957404.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120322902|gb|ABM17217.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 586 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 95/326 (29%), Gaps = 53/326 (16%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADI 68 +R+++ N+ R S L + ++ DI Sbjct: 273 APTKSTDSIRIMTLNLQNY-FNGDGQGKGFPTPRGASSLEQFQTQNRKLARTIQDAHPDI 331 Query: 69 VFLQEM-------GSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + E+ S A +A+ + ++ RD N+ I TA+ R+ Sbjct: 332 LAVTELENDGYGPDSAAAGLARTLGADW--------AVVQTPGRDGNDAIRTALLYRESR 383 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI--WVLDIHLKS-FCFLDSLENTY 177 VR P +R + G ++ WV+ HLKS C + Sbjct: 384 VRPT---GPAYRPGPGELPGASRPPLAQAFRARGSELTFWVVVPHLKSKSCRHAAAREQD 440 Query: 178 SPS---C----SLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTI 228 C LS A + W+ P +I GD N ++ Sbjct: 441 QGDGQGCYNRQRTLSANAIVI--WLQALAGDPETTPVLITGDLNSYAREAPVER--FQEA 496 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRN--KIPIDYFVMDQNAYKFL--------IQESFSEI 278 + ++ +C K +DY + ++ + + Sbjct: 497 GFTSLVHQYYPCLPMQCEHYTYRYQGQKGTLDYALASPALMPWIEQAQIWNINADEPRAL 556 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 Y + +S R SDH P+ D Sbjct: 557 SYRQTPDQSGPWRSSDHNPVLTDLKL 582 >gi|149280306|ref|ZP_01886428.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] gi|149228995|gb|EDM34392.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] Length = 370 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 103/312 (33%), Gaps = 80/312 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQE------ 73 VR++++N++ EG ++ ++ L + DI+ QE Sbjct: 106 VRMMTYNVHGFKPHEG------------QEFERVKHQMLKLIEDQNPDIIGFQEYYTRRR 153 Query: 74 --MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 +++ + + S+E S +A+ K V + Sbjct: 154 GTFDITDSLKTILKTPYYYFVSSSENDYEAS----------GLAIFSKYPIV-NKGVIPF 202 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF-------LDSLENTYSPSCSLL 184 G + ++ + VE++ KK+ V ++HL+S F LD ++ + P Sbjct: 203 GNNHIGN-----GSIFIDVEVHQKKLRVYNVHLQSISFDKQDYTYLDKVKKSMDPDLQPS 257 Query: 185 SQQAQWLKDWITQKKESLV-----------PFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + A LK+ ++ + P++IAGDFN S Sbjct: 258 KRIAGMLKNAFMKRSMQVDLMKAHMGNCSIPYLIAGDFNDTPASYA-------ATQMTKS 310 Query: 234 LIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L +EK S N + IDY + ++ + +L Sbjct: 311 LKSTFREKGSGFGQTYNGKFPNFQIDYIAVTKDIEVL--------------NHLVIPAKL 356 Query: 293 SDHCPISIDYDF 304 SDH P+ D Sbjct: 357 SDHFPVRSDLRL 368 >gi|77464360|ref|YP_353864.1| endonuclease/exonuclease/phosphatase fa [Rhodobacter sphaeroides 2.4.1] gi|77388778|gb|ABA79963.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacter sphaeroides 2.4.1] Length = 339 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 105/348 (30%), Gaps = 74/348 (21%) Query: 21 AQKVRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQ 72 A+ +R+ ++N+ + + + R + L LDAD + + Sbjct: 2 ARPLRIATYNVEWFNGLFDDHGRLRTDNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 73 E----------MGSYNAVAKVFP------------KNTWCIFYSTERLINHSKRDSNNDI 110 E + + A+ F + I + + D Sbjct: 62 EAPNQSRRRSTVKALETFARTFGLRASRAVLGFPSETEQEIALLYDPSRIEAHHDP---Q 118 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A A R V FS+ EL + +G + V+ +H KS Sbjct: 119 SSARAPRFDEVFRFDIDVDATPEAIRFSKPPL----ELALRADGHPLRVIGVHAKS--KA 172 Query: 171 DSLENTYSPSCSL-LSQQAQWLKD--WITQKKES----LVPFVIAGDFNRKINYLGNNDD 223 + + + + + Q L + W+ ++ ++ GDFN L + Sbjct: 173 PHGARNPAEAVRIGIQNRRQQLAECVWLRRRVAGLLARHQSVMVMGDFNDGPG-LDEYEK 231 Query: 224 FWK--------------TIDPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDYFV 261 + + ++ R + + + +D+ + Sbjct: 232 LFGRSGIEIVLGLEEPPELRLHEPHARMALTQRVGIQPSSARFWLAPEQQYFEALLDFIM 291 Query: 262 MDQN----AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 + + + ++ I ++ + +++ SDH P+++D D Sbjct: 292 VSADLAAKSPRWRIWHPLNDPNCFRTPELQQALLAASDHFPVTLDIDL 339 >gi|294054975|ref|YP_003548633.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614308|gb|ADE54463.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 299 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 119/302 (39%), Gaps = 22/302 (7%) Query: 10 VFFLVPCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + +V C A+ AQ +R+ S N++ + ++ W+ + S+ LRQ ++ D Sbjct: 11 LLGVVSCFAAQAQ-LRVASLNLDNYLIMDRSVDGRWRKEYPKPESEKHALRQAILSVRPD 69 Query: 68 IVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 ++ +QE+G + ++ + YS+ + R S+ H A+ + +++ Sbjct: 70 VLVVQEIGGAEFLEELRLDLANLGLEYSSAIHM----RGSDTVRHVAVLSMVEPQSIVRH 125 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + +A +R +EL E G+ + +HLKS + S Sbjct: 126 ADLNFAYMERR-QAVSRGLLELSFEGRGGQNFRLFAVHLKSR-RTTEKADPQSVLWRT-- 181 Query: 186 QQAQWLKDWITQK--KESLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++A+ ++ I ++ + +P+++ GDFN + + + P D Sbjct: 182 REAEACRNRIIERHDGDGNLPYLVVGDFNDHPRSSTLRR---FYQRGERELGHWVPA-AD 237 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 SR + + V A L+ + DD ++ SDH + +D Sbjct: 238 SRGQVWTHFYAREYSYSTVDGFVASPELLPSIKNGRATIVDDPRTLSA--SDHRMVYLDL 295 Query: 303 DF 304 DF Sbjct: 296 DF 297 >gi|187929032|ref|YP_001899519.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] gi|187725922|gb|ACD27087.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] Length = 269 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 92/316 (29%), Gaps = 87/316 (27%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L+E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129 E+ P + + + ++ + + +A+ + Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYTSLFTGQKTYNGVAILSRKASVPEGRDVVKN 88 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + G D R V +++G + V+ ++ + LDS + Y + + Sbjct: 89 IPGFADEQQRI-----VAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLE 137 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRC- 245 L+ W+T + + ++ GDFN +D + + + F + + Sbjct: 138 ALQAWLTSELAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQGAGLV 197 Query: 246 ----------NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ ID+ ++ K D + Sbjct: 198 DAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVP 250 Query: 287 SRGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 251 RTWEQPSDHTPVVAAL 266 >gi|114799308|ref|YP_761397.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114739482|gb|ABI77607.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 354 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 99/330 (30%), Gaps = 73/330 (22%) Query: 16 CTASVAQKVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + ++L+ WNI G L S + + ++ + D Sbjct: 44 PLPAAEAPLKLMIWNIGYSGLGEESDFQTDGGKMLRPPSREAVEKNLAGIQAVLREEAPD 103 Query: 68 IVFLQEMGSYNAVAKVFP---------KNTWCIFYST---ERLINHSKRDSNNDIHTAIA 115 I+ +QE+ + + +F S L +A Sbjct: 104 ILMMQELAAPGFLTHTVDVLSGVKDALPGYGMVFSSDIRTRLLPGPLGLRHGLGTFAKVA 163 Query: 116 -VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSL 173 R K VR+ ++ P++G R V++ +E++G ++++HL +F D Sbjct: 164 GERTKLVRLTEEPEPIMGFIQR------RYHVQVTELEVSGAPWVIINVHLSAF---DEG 214 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN----------------Y 217 T QQ + + D + V+ GD+N ++ + Sbjct: 215 AGTR-------MQQVREVLDLAQSHYQQGKAVVLGGDWNMRLAATDFAYQSDESALFWVH 267 Query: 218 LGNNDDF---WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 D W+ + E+ + N ID F+ N ++ Sbjct: 268 DFPRDALRPGWQIVIDPAVATTRTNEQPYKSGVN----YTTIIDGFIASPNVTVEAVRG- 322 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 G ++DH P+ + Sbjct: 323 -----------LDLGFAITDHQPVVATFRL 341 >gi|163814394|ref|ZP_02205783.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759] gi|158450029|gb|EDP27024.1| hypothetical protein COPEUT_00545 [Coprococcus eutactus ATCC 27759] Length = 382 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 111/327 (33%), Gaps = 71/327 (21%) Query: 19 SVAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 S+ + +V+WNI S G S++ ++ ++ ++ + + + +L DI+ Sbjct: 79 SIGDNISVVTWNIGYGSLGANADFFMDGGDSVYTSTKEQVLTNMSAITEELNSLSPDIIL 138 Query: 71 LQEMG---------SYNAVAKVFPKNT-------WCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + ++ + + + + + S I T Sbjct: 139 LQEVDEKSSRSHKINEASIIRDELPSYNSSYAYNYKTLMVPYPIPPIGQVASG--IMTLS 196 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++ P + ++ ++ K++ ++++HL++ DS E Sbjct: 197 TYPASTACRIKLPCPFSYPIRLCNLKRCLIVSKVPIDGTDKELVIVNLHLEA---YDSGE 253 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG-DFNRKI------NYLGNNDDFWK- 226 + Q + L D I Q + +VIAG DFN+ Y +D+ W Sbjct: 254 GKAA--------QTKMLAD-ILQAETDKGNYVIAGGDFNQTFSNTDISAYPQQSDELWAP 304 Query: 227 ----TIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + C A++ + ID F++ N I Sbjct: 305 SLIDISEFGNDFTCITDSSVPTCRSLDKSYDDADEKFQF-YVIDGFIVSSNISIKSI--- 360 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISID 301 + + + SDH PI ++ Sbjct: 361 ---------ETVNLNFQNSDHNPIKLE 378 >gi|78048060|ref|YP_364235.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927483|ref|ZP_08188725.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78036490|emb|CAJ24181.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542146|gb|EGD13646.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 298 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 97/295 (32%), Gaps = 66/295 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN----LDADIVFL 71 +A+ ++++ LV+ N++ D+ R Y L D++ L Sbjct: 35 SSATASREMTLVTLNLHH----------------DREDWPARRAYIARELKRLAPDVIAL 78 Query: 72 QEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 QE+ +A+ + F S + + + + A+ R+K + Sbjct: 79 QEVIERRGSVENQAAWLARKLGYDY--TFASVDPVGAPKRYGN------ALLSRRKVLAT 130 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 Q+ L R A L V+++G+ + V HL + + Sbjct: 131 HQRLLQPLDDY--------RVAAHLQVDVDGQPVNVYVTHL------NERADARGAGIRT 176 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDSLIRFPKE 240 +Q L D+I + P VIAGDFN ++ + D S+ R Sbjct: 177 --RQVADLLDFIAS-NSAQAPVVIAGDFNTAADTLDLQALRKGYG---DSYGSVHRNSDA 230 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 S N + ID+ QN E Y + G+ SDH Sbjct: 231 TVSTLNMHI-FDRPARIDHVFFQQNRLLAREARILFEAPY------AEGRWASDH 278 >gi|187732981|ref|YP_001881024.1| endonuclease/exonuclease/phosphatase family protein [Shigella boydii CDC 3083-94] gi|187429973|gb|ACD09247.1| endonuclease/exonuclease/phosphatase family protein [Shigella boydii CDC 3083-94] Length = 253 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 47/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P + F + + + + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMCRDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + GA+ R + ++ + GK I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVDGAEK-------RGVLYCRIVPPMTGKAIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L + + Q L +W+ + + P ++AGDFN D + Sbjct: 144 -----GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR-Q 181 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + E +R + + +D+ K + + + Sbjct: 182 KANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP------L 235 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 236 RTWRHLSDHAPLSAEIHL 253 >gi|218530191|ref|YP_002421007.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] gi|218522494|gb|ACK83079.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] Length = 264 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 96/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + D+V LQE+ +A Sbjct: 1 MRITTWNVN------------SIKQR----VGHLLGFLDEAKPDVVCLQELKCQDAS--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR A+D + Sbjct: 42 FPR-------EEIEAAGYAVETLGQKAYNGVALLVRAPLQYTQLLRGLPGDAEDEQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + V I+L + + +Y + + L A+ L Sbjct: 92 -RYIEALVHGEGVAPVRVASIYLPNGNPAPGPKYSYKLAFMARLRAHARAL-------MT 143 Query: 201 SLVPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPND 232 + V+AGDFN R + G D + +P+ Sbjct: 144 TEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPRRAFRALLAEGFTDGL-RACEPSA 202 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 L F + + C I ID+ ++ A L+ S L ++ Sbjct: 203 GLYTF-WDYQAGCWPR---NQGIRIDHLLLSPQAADRLVSASVQRHL-------RGLEKP 251 Query: 293 SDHCPISIDYD 303 SDH P++++ Sbjct: 252 SDHVPVTVELS 262 >gi|294627625|ref|ZP_06706207.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666886|ref|ZP_06732117.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292597977|gb|EFF42132.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603334|gb|EFF46754.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 287 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 101/309 (32%), Gaps = 52/309 (16%) Query: 8 ALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 AL+ +P A A +R++S+N+ V + KR + K Sbjct: 17 ALLCIALPALAGTPAAPLRVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHP 69 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D+ QE+ S A + R +R ++D H + + + V++ Sbjct: 70 DVFGTQELVSEQAAFLAEQLPDY-------RWFGQGRRGDDSDEHMGVFYDARVLEVVES 122 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 P ++ R A L E + ++ ++ + H + D E Sbjct: 123 GNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFP---YRDEDEPARE 179 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDSLI 235 S L+ + L I P V+ GDFN KI Y +L Sbjct: 180 RSARLILSRIAQLPATI--------PVVLTGDFNSDPDKITYP--------------TLT 217 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++ ++ + N D+ +++ + D + G SDH Sbjct: 218 AVLRDARAQASKRSGPEN-TFQDFTTHPTRRIDWILYRGLRPSRFATLDDRPGGILPSDH 276 Query: 296 CPISIDYDF 304 P+ ++D+ Sbjct: 277 YPVMAEFDW 285 >gi|21241048|ref|NP_640630.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] gi|21106341|gb|AAM35166.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 609 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 103/336 (30%), Gaps = 54/336 (16%) Query: 8 ALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQ 59 L +P + +R+ S+N+ G + + RT + L + Sbjct: 289 VLGPLTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAK 348 Query: 60 YAKN---LDADIVFLQEMGS-----YNAVAKVFP-------KNTWCIFYSTERLINHSKR 104 L AD+ L E+ + AV+++ W + Sbjct: 349 LVATIVPLGADVAALMEVENDGNGADAAVSQLVAALNAAGKDKDWQFVDTGSGPG----- 403 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIH 163 ++ I I R V + + L G ++ SR +A G V+ H Sbjct: 404 --DDAIRVGIIYRSSQVTPVGRPATLTGGPFENHSRVPLAQAFR---SARGATFVVVANH 458 Query: 164 LKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKI 215 KS C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 459 FKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAY- 517 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + + K+ S + R +D+ ++ K L + Sbjct: 518 AMETPMRSLRASGWQDAFAVAGVKQPYSYVYDGLSGR----LDHALLSPAMAKQLRGAAE 573 Query: 276 SEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 + + D K R SDH P+ + + Sbjct: 574 WHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 609 >gi|309782573|ref|ZP_07677296.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] gi|308918664|gb|EFP64338.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] Length = 269 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 87/316 (27%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L+E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKKNVRVLQQSYP 129 E+ P + + + ++ + + +A+ + Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILSRKASVPEGRDVVKN 88 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + G D R V +++G + V+ ++ + LDS + Y + + Sbjct: 89 IPGFTDDQQRI-----VAATYDVDGGPVRVISAYIPNGQALDSDKFVYK------LRWLE 137 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRC- 245 L+ W+ + + ++ GDFN +D + + + F + + Sbjct: 138 ALQAWLASEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLVSPEERAAFRAMQAAGLV 197 Query: 246 ----------NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ ID+ ++ K D + Sbjct: 198 DAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKLCESCHI-------DRVP 250 Query: 287 SRGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 251 RTWEQPSDHTPVVAAL 266 >gi|124022407|ref|YP_001016714.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] gi|123962693|gb|ABM77449.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] Length = 279 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 102/313 (32%), Gaps = 81/313 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D ++ + ++ D++ LQE + Sbjct: 1 MQIATWNVN--------------SIRTRLD--QVQAWLQDAQPDLLCLQETKVDDPLFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 +VF + + + +A+ R+ V + L + Sbjct: 45 EVFEAQGYQV------------HFHGQKAYNGVAIVSRQPLEDVRRGFTGELPEDAEALQ 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQWLKDWIT 196 G ++ V + N I ++++++ + L S + Y SC L +++ Sbjct: 93 LGEQKRVISALVNN---IRIVNVYVPNGSALKSEKYPYKLEWLSC---------LNRYLS 140 Query: 197 QKKESLVPFVIAGDFN-----RKINYLGN-----------NDDFWKTIDPNDSLIRFPKE 240 + + P + GDFN R I++ + K + D L + Sbjct: 141 AQAKRDEPLCLVGDFNIALEARDIHHPERLTGGIMASELEREALLKVLG--DRLHDVFRV 198 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N + ID+ + + ++ ++ Sbjct: 199 FEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELL-----SQARSCVIHKH--LRGHEK 251 Query: 292 LSDHCPISIDYDF 304 SDH P+++D ++ Sbjct: 252 PSDHAPVTVDLNW 264 >gi|323967391|gb|EGB62812.1| endonuclease/Exonuclease/phosphatase [Escherichia coli M863] gi|327253576|gb|EGE65205.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli STEC_7v] Length = 253 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 67/268 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKIN 216 L L + + Q L +W+ + + P ++AGDF N + Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFNDWRQKANHPLK 188 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D+ + + +R + + +D + + Sbjct: 189 MQAGLDEIFTR----------AHGRPARTFPVQFPLLR--LDRIYVKNASASAPTALPLR 236 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 T-----------WRHLSDHAPLSAEIHL 253 >gi|294667784|ref|ZP_06732994.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602410|gb|EFF45851.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 572 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 99/344 (28%), Gaps = 70/344 (20%) Query: 8 ALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-LRQ 59 L +P + +R+ S+N+ G + + RT + L + Sbjct: 252 VLGPLTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLAK 311 Query: 60 YAKN---LDADIVFLQEMGS-----YNAVAKVFP-------KNTWCIFYSTERLINHSKR 104 L AD+ L E+ + AV+++ W + Sbjct: 312 LVATIVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPG----- 366 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI-H 163 ++ I I R + +V P + F +R + +V+ H Sbjct: 367 --DDAIRVGILYR--SSQVTPVGKPAMLTGGPFEN-HSRVPLAQAFRSARGATFVVVANH 421 Query: 164 LKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN--- 212 KS C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 422 FKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYA 481 Query: 213 -----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 R + G D + R +D+ ++ Sbjct: 482 MEMPMRSLRASGWQDA-FAVAGVKQPYSYVYDGLSGR------------LDHALLSPAMA 528 Query: 268 KFLIQESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 K L + I + D K R SDH P+ + + Sbjct: 529 KQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|282863431|ref|ZP_06272490.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282561766|gb|EFB67309.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 285 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 68/316 (21%) Query: 9 LVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 L+ A A+ +R+ ++NI G + D + Sbjct: 16 LLATAFAPPAGAAERGHVVPLRVATYNI-----HAGAGMDGVF------DLDRQAAQLRA 64 Query: 64 LDADIVFLQEMG------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 L AD++ LQE+ + ++ ++ YS + + R Sbjct: 65 LGADVIGLQEVDAHWGARSEWRDLASELAERLHMNVSFAPVYSLDPVAVGEPRREF---- 120 Query: 112 TAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFC 168 +AV R + + L +D E+L+ + G + V HL Sbjct: 121 -GVAVLSRYRILDAENHEITRLSTQDPDPVPAPAPGFGEVLLRVRGLPVRVYVTHL---- 175 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + PS + Q + I + ++ GDFN + WK + Sbjct: 176 -----DYRPDPSVRTV--QVAETRR-IMARDRGHR--ILLGDFNATPDAPELA-PLWKEL 224 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D + + N+ ID+ + + + + Sbjct: 225 TDADP--------GAPTFPAADPVNR--IDFVAVSKAGRT--GAGQVRVREAAVAETLA- 271 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ D + Sbjct: 272 ----SDHRPLVADLEL 283 >gi|330967692|gb|EGH67952.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 380 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 103/320 (32%), Gaps = 58/320 (18%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + +A ++P +T ++ E + + S T ++ Sbjct: 129 LQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVPSPHIWGSVGRKLTTLS- 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ HL + D Sbjct: 188 RFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKLAVINTHLATAKPGDGTA 247 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGNN 221 + L + + + P++I GDFN ++I+Y ++ Sbjct: 248 QKQIAATETL----------LDKLEGGGTPWLIGGDFNLLPLGQYQRLPEQQRISYTADS 297 Query: 222 D--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + W+ P +S P D + + + S S Sbjct: 298 ELHTLWEK------YPMIPNNTESSGTDRSQWLTHFPNDSRINGPDRTVDYLFYSPSLKR 351 Query: 280 YNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 352 VSARVRRDDTLLISDHLPVI 371 >gi|108759756|ref|YP_628914.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108463636|gb|ABF88821.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 360 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 100/330 (30%), Gaps = 63/330 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +P + S +R+V++N+ G++ +R + L D+V L Sbjct: 28 ALPMSPS---PLRIVTYNVRYFGHMLRGLASTVGPKRRVAAALASLDPL-----PDVVCL 79 Query: 72 QEMGSYNAVAKVF-----PKNTWCIFYSTERL------------------INHSKRDSNN 108 QE+ + + + + P T + + +H K + Sbjct: 80 QEVETSSLRSNIADRPKQPGETQLTAFMGRMVETFDRLGREMPYEAFYFRAHHYKLREVS 139 Query: 109 DIHTAIAV----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI------NGKKIW 158 T +AV RK V P R +R+ + + + Sbjct: 140 LYTTGLAVLVNTRKLEVATHNVGAPQAITHHHVQRLKDRKQSRICAHMRLLRREDRHPFH 199 Query: 159 VLDIHL---KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + + HL F +A+ L + Q P+++ GDFN Sbjct: 200 IFNTHLSLPTPFAREFWATRDKMGGGVNQLHEARKLTE-FMQGLTGDEPYIVCGDFN--- 255 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKD------SRCNANKNL-RNKIPIDYFVMDQNAYK 268 ++ + + L SR ++ +D+ V + Sbjct: 256 --SPPASPVYRYLTTDGRLTCAQAAVGQIDPNVSRGFPTAGFLHMRMHLDH-VFSGAGVR 312 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +L + D++SR LSDH PI Sbjct: 313 WLDT----QETSPFGDLRSRFHGLSDHMPI 338 >gi|134295849|ref|YP_001119584.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134139006|gb|ABO54749.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 284 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 54/309 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVV----DLPRTVAAARRLGDF------DVLCLQEVTRGFGALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + I + + + + AIA R RVL+Q P Sbjct: 51 GPGPDQFAELAALLPG--YTIVDAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + + R A+E+ + + V+ HL + +D+L + +C+ Sbjct: 109 WPA--DADAPSMPRVALEVELLAPSGPVRVVTTHLEFYSARQRLAQVDALRARHREACAH 166 Query: 184 LSQQAQWLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 A ++ GDFN ++D + + ++P F Sbjct: 167 ADHPAPAENATGPFSATAQPRDAIVCGDFN----SAFDSDAYRRMLEPIADAPSFVDAWV 222 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRLSD 294 +R D ++ + ++ + + R R SD Sbjct: 223 ARHPGRTPPPTAGVYDTV-------QWSDGPLACDFVFVTETLLPRVTRCEIDGDVRASD 275 Query: 295 HCPISIDYD 303 H P+ ++ D Sbjct: 276 HQPVVLELD 284 >gi|168752009|ref|ZP_02777031.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|168756575|ref|ZP_02781582.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|168767291|ref|ZP_02792298.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|168777230|ref|ZP_02802237.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|168779334|ref|ZP_02804341.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|195936830|ref|ZP_03082212.1| DNase [Escherichia coli O157:H7 str. EC4024] gi|208815890|ref|ZP_03257069.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208822066|ref|ZP_03262385.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209396778|ref|YP_002269459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|254791984|ref|YP_003076821.1| putative DNase [Escherichia coli O157:H7 str. TW14359] gi|187767486|gb|EDU31330.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|188014050|gb|EDU52172.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|189003112|gb|EDU72098.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|189356304|gb|EDU74723.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|189363397|gb|EDU81816.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|208732538|gb|EDZ81226.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208737551|gb|EDZ85234.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209158178|gb|ACI35611.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|209775986|gb|ACI86305.1| hypothetical protein ECs0868 [Escherichia coli] gi|254591384|gb|ACT70745.1| predicted DNase [Escherichia coli O157:H7 str. TW14359] Length = 253 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNTSASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|325498038|gb|EGC95897.1| hypothetical protein ECD227_2135 [Escherichia fergusonii ECD227] Length = 242 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 22 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 71 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 72 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 131 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 132 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 168 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 169 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 223 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 224 --LRTWRHLSDHAPLSAEIHL 242 >gi|324114357|gb|EGC08326.1| endonuclease/Exonuclease/phosphatase [Escherichia fergusonii B253] Length = 253 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 82/268 (30%), Gaps = 67/268 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKIN 216 L L + + Q L +W+ + + P ++AGDF N + Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFNDWRQKANHPLK 188 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D+ + + +R + + +D + + Sbjct: 189 MQAGLDEIFT----------HAHGRPARTFPVQFPLLR--LDRIYVKNASASAPTALPLR 236 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 T-----------WRHLSDHAPLSAEIHL 253 >gi|78778870|ref|YP_396982.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] gi|78712369|gb|ABB49546.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] Length = 281 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 94/302 (31%), Gaps = 63/302 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N RT + + + ++ DI+ LQE KV Sbjct: 3 IATWNVN--------------SIRTR--LSQIIDWMNQVNPDILCLQE-------TKVMD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + + +S + +A+ ++ G DS A Sbjct: 40 NS---FPFEPFEKLGYSVEVYGQKAYNGVAI-ISKIKAENVKKGFYGCSDSDQNAEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + L+ + I ++++++ + L+S + Y + L ++ ++++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLESNKFEYKIN------WLSSLASYLDEQEKKGELI 149 Query: 206 VIAGDFN---RKINYLGNNDD----FWKTIDPN-----------DSLIRFPKEKDSRCN- 246 + GDFN ++ I+ N DS F K Sbjct: 150 CLMGDFNVAPSNLDIYDPKKYEGGIMASEIERNALNNVLKERLIDSFRIFEKNPGHWSWW 209 Query: 247 ---ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N NK ID+ + + L D R SDH P+ ID Sbjct: 210 DYRNNAYELNKGWRIDHIYISKELSSKLKSCVI-------DSSPRANLRPSDHAPVMIDL 262 Query: 303 DF 304 + Sbjct: 263 NL 264 >gi|206560253|ref|YP_002231017.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198036294|emb|CAR52190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 284 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 107/316 (33%), Gaps = 70/316 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVV----DLPRTVAAIRELGDF------DVLCLQEVTRGFDALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + + + + + + AIA R RVL+QS P Sbjct: 51 RPGPDQFGELAALLPG--YTVVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + + R A+++ ++ + V+ HL + +D+L + + +C+ Sbjct: 109 WPA--DAGAPSMPRVALDIELQAPFGPLRVVTTHLEYYSARQRLAQVDALRDRHREACAH 166 Query: 184 LSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + A+ + + PF ++ GDFN D D + Sbjct: 167 ATHPARA--------ETAEGPFSATGQPRDAIVCGDFNSAFGSDAYRRFLAPLADAPDFI 218 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------ 288 + R + ++ + ++ D + R Sbjct: 219 DAWVARHPGRTPPPTAGVY-----------DTVQWSDGPLACDFVFVTDTLLPRVTRCEI 267 Query: 289 --GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 268 DGNVRASDHQPVLLDL 283 >gi|148554033|ref|YP_001261615.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1] gi|148499223|gb|ABQ67477.1| hypothetical protein Swit_1111 [Sphingomonas wittichii RW1] Length = 351 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 93/299 (31%), Gaps = 38/299 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + ++++N+ L +++ R LR A +V LQE A+ Sbjct: 50 LSVMTYNVEGL-PWPARFGRGDALARIGERLAALR--ATGAQPRVVLLQEAFSDDAKAI- 105 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVR----VLQQSYPLLG 132 + + + F + L R + A A R + V+ YP+L Sbjct: 106 RAASGHRYAAFGPDDALAGPPTRSPADRAFAAEASFLKGERSGKLLDSGLVILSDYPILS 165 Query: 133 AKDSFSRAGNRRAVE-----------LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + A + + V I V+++HL S + + Sbjct: 166 VRRAAFPAAACAGYDCLANKGMVMAVVAVPGAPGPIAVVNLHLNS---KRASGVAIERAD 222 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKE 240 + QQ L ++ +P ++ GDFN I + + + P + Sbjct: 223 AAFRQQVAALDRFLAANHVPGMPMIVGGDFN--IGRSAARRTMVMEVLARHHGT--APAD 278 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK----SRGKRLSDH 295 S C ++FLI + +++ + G LSDH Sbjct: 279 ALSACTGVCRDGLSADAREARRRAKDWQFLIPGAAADLTVRRIATPFGREADGSMLSDH 337 >gi|330837418|ref|YP_004412059.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] gi|329749321|gb|AEC02677.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] Length = 372 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 81/230 (35%), Gaps = 40/230 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQ------KVRLVSWNINTL---SEQEGVSLWKNSVKRTTS 52 I +V+ L+ + C+ V + V ++SWN+ L R Sbjct: 6 ISIHVILLMCIVSLCSCPVGEGEAAPTDVTILSWNVQNLMDGRTSGTEYEEYGPSSRWDE 65 Query: 53 --------DYTLL--RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 D + + DADI+ LQE+ + VA + + R + Sbjct: 66 TAYHLRLEDIRKVLSSRIFP--DADIIVLQEVENSGVVADLIAGP---LARRGYRWYAAA 120 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 ++ I TAI R VR+ Q G R A+E + ++G + V + Sbjct: 121 GQEGG-AICTAIISRLNPVRITVQGV-----------EGFRPALEAVFNVHGGTVVVWAV 168 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 H KS D + + + L L W ++ + VIAGD N Sbjct: 169 HAKSRKEGDRVTEEGRRALASLLSTRARL--W--RQADPGCLLVIAGDMN 214 >gi|330873531|gb|EGH07680.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 380 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 107/337 (31%), Gaps = 65/337 (19%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLAASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S T ++ R + P+ A + + A+ + +G K+ Sbjct: 172 SPHIWGSVGRKLTTLS-RFHIDSAERLQLPVPDANIISRQFQPKNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----- 212 V++ HL + D + L + + + P++I GDFN Sbjct: 231 AVINTHLATAKPGDGTAQKQIAATETL----------LDKLEGGGTPWLIGGDFNLLPLG 280 Query: 213 --------RKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++I+Y +++ W+ P +S P D V Sbjct: 281 QYQRLPEQQRISYAADSELHTLWEK------YPMIPNNTESSGTDRSQWLTHFPNDSRVN 334 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + S S + + +SDH P+ Sbjct: 335 GPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 371 >gi|257466522|ref|ZP_05630833.1| hypothetical protein FgonA2_03678 [Fusobacterium gonidiaformans ATCC 25563] gi|315917677|ref|ZP_07913917.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563] gi|313691552|gb|EFS28387.1| DNAse I-like protein DHP2 [Fusobacterium gonidiaformans ATCC 25563] Length = 274 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 96/303 (31%), Gaps = 45/303 (14%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K+ + FL AS AQ+ + S+N+ L E D+ + + ++ Sbjct: 2 KFFYQCLLFLCLSIASFAQEAYIASFNVLKLGESP-------------KDFETMAKTIEH 48 Query: 64 LDADIVFLQEMGSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D+V L+E+ + + ++ +TW S + ++ + A + Sbjct: 49 F--DLVGLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKE-----YYAYVWK 101 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K V L + F R + L+ + S Sbjct: 102 KDRVTFLSSEGFYPDREKLFIREP--YGANFQIGKFDFTFV-----LQHAVYGKSETERR 154 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + Q + + + + +I GDFN L D+ + ++ + I + Sbjct: 155 AEA-----FQLVKVYRYFQDRNKKENDILIGGDFN-----LSAFDEAFSSLYEDKDQIIY 204 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + D + + + +S I + K ++SDH P Sbjct: 205 GVDPRIKTTIGMKKMANSY-DNIFLSKKYTEEFTGKSG-AIDFTNRQYKVMRNKVSDHLP 262 Query: 298 ISI 300 + I Sbjct: 263 VFI 265 >gi|120612279|ref|YP_971957.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] gi|120590743|gb|ABM34183.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] Length = 252 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 41/199 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI +GV + + L + LDADIV LQE+ KV Sbjct: 13 LRIATYNI-----HKGVQGLGPAR---RLEIHNLGHAVEQLDADIVCLQEV------RKV 58 Query: 84 -------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD- 135 FP W E L A ++ L +P++G + Sbjct: 59 HRRGARHFP--RWPELPQAEFLAPEGYEAVYRTN--AFTRHGEHGNALLTRWPVIGHQHE 114 Query: 136 --SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R R + + VE+ G+++ + +HL S +Q + L+ Sbjct: 115 DMSDHRFELRGLLHVEVEVQGRRVHAIVVHL--GLIPGSRV-----------RQVEQLQR 161 Query: 194 WITQKKESLVPFVIAGDFN 212 ++ ++ P V+AGDFN Sbjct: 162 FVAREVPPGAPLVVAGDFN 180 >gi|157158045|ref|YP_001461980.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300822925|ref|ZP_07103060.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300922814|ref|ZP_07138900.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|301327982|ref|ZP_07221147.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|331667154|ref|ZP_08368019.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331676525|ref|ZP_08377221.1| putative cytoplasmic protein [Escherichia coli H591] gi|157080075|gb|ABV19783.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300420846|gb|EFK04157.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|300524466|gb|EFK45535.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300845547|gb|EFK73307.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|320198979|gb|EFW73576.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EC4100B] gi|331065510|gb|EGI37403.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331075214|gb|EGI46512.1| putative cytoplasmic protein [Escherichia coli H591] Length = 253 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 83/268 (30%), Gaps = 67/268 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKIN 216 L L + + Q L +W+ + + P ++AGDF N + Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFNDWRQKANHPLK 188 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D+ + + + +R + + +D + + Sbjct: 189 VQAGLDEIFTRV----------HGRPARTFPVQFPLLR--LDRIYVKNASASAPTALPLR 236 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 T-----------WRHLSDHAPLSAEIHL 253 >gi|160900882|ref|YP_001566464.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366466|gb|ABX38079.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 257 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 72/197 (36%), Gaps = 37/197 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +R+ ++NI+ V+R L + LDADIV LQE+ A Sbjct: 18 LRVATYNIH------KGVQGMGPVRRLE--IHNLGHAVEQLDADIVCLQEVRKMNHKEAA 69 Query: 81 AKVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAKD--- 135 W + + + + +T R + L +P++G + Sbjct: 70 Y----FERWPQVSQAEYLAPLGYEAVYRTNAYT----RHGEHGNALLTRWPVVGHQHEDI 121 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R R + + VE+ +++ + +HL S +Q LK +I Sbjct: 122 SDHRFEQRGLLHVEVEVQNRRVHTIVVHL--GLIPGSRV-----------RQVSQLKRFI 168 Query: 196 TQKKESLVPFVIAGDFN 212 ++ P V+AGDFN Sbjct: 169 EREVPPGAPVVVAGDFN 185 >gi|108762628|ref|YP_630932.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108466508|gb|ABF91693.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 254 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 90/290 (31%), Gaps = 69/290 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++RLVS+NI G+ D + + +DADIV LQE+G + AV Sbjct: 2 ELRLVSYNI-----HSGIGTDGRF------DLGRVGAVLREVDADIVALQEVGDFRAV-- 48 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRKK---------NVRVLQQSYPL 130 T R +H A VR + +++ Sbjct: 49 ------------TPREDQPEHLADMLGLHMAFGPNVVRNGRRYGNAILSRLPIVKSRNYD 96 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L R R +++ G ++ V +HL L Q+A Sbjct: 97 LSVGRREPRGALRCDLDI---GGGLQLHVFSLHL--GLRLGERRR----------QEALL 141 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L I + P V+ GDFN N + + + +L +R + Sbjct: 142 LSSDILRDAARKDPLVVCGDFNYWGNGPVPS--LVRQAIHDAALEL---GAPARTYPTRL 196 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + +D +D I +E+ SDH P+ + Sbjct: 197 PLLR--LDRIFVDAGVRPLSIHPHRTELSRVA----------SDHLPLVL 234 >gi|83591541|ref|YP_425293.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83574455|gb|ABC21006.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 264 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 93/299 (31%), Gaps = 58/299 (19%) Query: 15 PCTASVAQKV--RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + A + R+V WN+ +R S + + L D+V LQ Sbjct: 15 STSEGFAGSIALRVVCWNL--------HGCVGTDRRRDPS---RVAKALAVLSPDVVGLQ 63 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAV--RKKNVRVLQQS 127 E+ + + + + + + A+ R V L Sbjct: 64 EVD----LRRHPGEAEDPLTLIARATGMRAVHSPTLKRDGGAYGNAILSRWPVVAALPLD 119 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + G + RRA++ +E + V+ HL LS+ Sbjct: 120 LSVPGCE-------PRRAMDATLEHPAGPLRVMVTHL--GLGRKERRWQVGRLGERLSRP 170 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDSRCN 246 +++ P ++ GDFN + W F D+ C+ Sbjct: 171 LAGADG-----RDAHHPLILMGDFN---------EWLPWGQTAVAGLKTWF----DADCS 212 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYDF 304 + + +PI + L++ S + + +G +R SDH P+ +D +F Sbjct: 213 -RRTFPSWLPI------LRLDRLLVRPSPRRLTPWPTLPQGQGIRRASDHLPLVVDLEF 264 >gi|68070969|ref|XP_677398.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56497502|emb|CAH97339.1| conserved hypothetical protein [Plasmodium berghei] Length = 404 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 58/188 (30%), Gaps = 45/188 (23%) Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-----TQ 197 + A+ L I I V+ HL + N C L +Q + L W+ + Sbjct: 207 KGAIYLKFNIKNNVIHVVATHLHAG------NNKSDEKCRL--KQIEELTKWVYHGIPST 258 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN------- 250 P GDFN + ++ F+K I N L + + Sbjct: 259 FINKYEPLFFVGDFNIR---YIKDEKFFKEITSNKYLNCVVTNNTLETTYDSSINDYCRY 315 Query: 251 ------LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRL----------- 292 + +DY ++ + K ++ ++ + Y I L Sbjct: 316 VEDDFEHKYVDTLDYILVSKDSNVKTIVPQTAVQRDYKP--ISIFKTMLCCIPYQSINIH 373 Query: 293 --SDHCPI 298 SDH PI Sbjct: 374 HASDHFPI 381 >gi|39935926|ref|NP_948202.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] gi|39649780|emb|CAE28302.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] Length = 303 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 69/313 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +R+ +WN+N + +R L + ++ D+V LQE+ Sbjct: 33 SSRATDGAMRIATWNVN------------SVRQR----LDHLVSWLQDCQPDVVCLQEI- 75 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + FP+ + ++ +A+ K L+++ P L + Sbjct: 76 --KCVDEAFPR-------EPIEALGYNVVTHGQKTFNGVALLSKYP--LEEANPGLAGDE 124 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S A R +E +V + + V ++L + + S + Y S L+D+ Sbjct: 125 SDVHA--RF-LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYA 175 Query: 196 TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRF 237 Q+ ++ P ++AGDFN D ++ +R Sbjct: 176 QQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTE-DALFRPETRESFQTLLGLGLTDALRA 234 Query: 238 PKEKDSR-----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + A +N ID+ ++ A L D ++ Sbjct: 235 TTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEK 287 Query: 292 LSDHCPISIDYDF 304 SDH P+ D+D Sbjct: 288 PSDHVPVWADFDL 300 >gi|260462207|ref|ZP_05810451.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259032067|gb|EEW33334.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 371 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 121/369 (32%), Gaps = 90/369 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLL---RQYAKNLD---- 65 +RL ++N+ L + S ++N + RT ++Y +L R A++ D Sbjct: 2 SLRLATFNVENLMNRFDFSGYRNQLNEDRTLALFDIQSEAEYKMLEQARAIAQSDDMRQL 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 AD++ +QE+ + A+ + + R + + + I AI + Sbjct: 62 TALAIAATRADVICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAIMM 121 Query: 117 RKKNVRVLQQSY------------------PLLGAKDSFSRAG--NRRAVELLVEINGKK 156 R + + + P L A + + R +E+ + + G Sbjct: 122 RNETAQGQPIEFVRMTSYAHVTYEQFGLYTPELAALGNQANERVFRRDCLEIDITVGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + +H KS + + + + +AQ ++ I Q+ + + I GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEQRFGVDHAADKRWAICGDMN 241 Query: 213 -RKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------- 256 + D+F ++ +D S + N R Sbjct: 242 DYRQRVKIAGDEFDGYRFEVVDEAQS--CIDVLTAGGFSENIVERRPEMNRWTFYHTRGP 299 Query: 257 -------IDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSD 294 +DY ++ + + + I +++ + SD Sbjct: 300 EERHLCQLDYILLSKGLAAKNATAVPDIIRNGQPWRTIFPAGQEVERFPRAGWDRPKASD 359 Query: 295 HCPISIDYD 303 HCP++I D Sbjct: 360 HCPVAITLD 368 >gi|218549643|ref|YP_002383434.1| metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] gi|218357184|emb|CAQ89819.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|313156903|gb|EFR56341.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 294 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 96/318 (30%), Gaps = 42/318 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + K ++ + V + AQ ++NI L+ ++ ++ Sbjct: 1 MNKLLICMAVACVTAFNAAAQSFSAATYNIRQLNAKDTAEGNGW-----ERRLPVISSLI 55 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + D DI QE+ + + ++AI ++ Sbjct: 56 RFHDFDIFGAQEVFHSQLQGMLAALPGYDYVGVGRDDGAAGGE------YSAIFYKRGRF 109 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLV--------EINGKKIWVLDIHLKSFCFLDSL 173 R+L + L +D A + + + ++ W H Sbjct: 110 RLLDSGHFWLS-EDPSKPGKGWDAKYVRICTWGRFYDRQSRQRFWFFTTH-----TDHRG 163 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTID 229 E + SC L+ + + L ++ GDFN + + + Sbjct: 164 EQAQAESCRLILAKIEELCR--------GERVILTGDFNVGETSRSYAILRDSGILSDTY 215 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIK 286 + ++ + + + IDY + ++ +++ + + K Sbjct: 216 DTAEIRYAETGTENWFDPDIKTFRR--IDYLFVTPGFRVLRYGILTDTYRSENPDGGERK 273 Query: 287 SRGKRLSDHCPISIDYDF 304 R + SDH P+ ++ +F Sbjct: 274 FRARTPSDHFPVQVELEF 291 >gi|257452662|ref|ZP_05617961.1| hypothetical protein F3_06314 [Fusobacterium sp. 3_1_5R] gi|317059202|ref|ZP_07923687.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R] gi|313684878|gb|EFS21713.1| DNAse I-like protein DHP2 [Fusobacterium sp. 3_1_5R] Length = 274 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 45/297 (15%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + FL AS AQ+ + S+N+ L E D+ + + ++ D+V Sbjct: 8 LLFLCLSIASFAQEAYIASFNVLKLGESP-------------KDFETMAKTIEHF--DLV 52 Query: 70 FLQEMGSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 L+E+ + + ++ +TW S + ++ + A +K V Sbjct: 53 GLEEVITPEGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKE-----YYAYVWKKDRVTF 107 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + F R + L+ + S + + Sbjct: 108 LSSEGFYPDREKLFIREP--YGANFQIGKFDFTFV-----LQHAVYGKSETERRAEA--- 157 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q + + + + +I GDFN L D+ + ++ + I + + Sbjct: 158 --FQLVKVYRYFQDRNKKENDILIGGDFN-----LSAFDEAFSSLYEDKDQIIYGVDPRI 210 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + D + + + +S I + K ++SDH P+ I Sbjct: 211 KTTIGMKKMANSY-DNIFLSKKYTEEFTGKSG-AIDFTNRQYKVMRNKVSDHLPVFI 265 >gi|320175211|gb|EFW50320.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae CDC 74-1112] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|163853725|ref|YP_001641768.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] gi|163665330|gb|ABY32697.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] Length = 328 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 95/298 (31%), Gaps = 67/298 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ ++++RL+++N+ +G + + L DIV LQE+ Sbjct: 74 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIAALAPDIVALQEVD 122 Query: 75 ---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A++ +S H + + AV L+ Sbjct: 123 VGRPRTDGLDQAEEIARLVG------MFSHFHPALHIEEE-----RYGDAVLTHLPSRLK 171 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ PL G R A+ + V K+ V+ H L + Sbjct: 172 RAGPLPGLLRRPGLEP-RGALWVEVTAGASKLQVITTHF-------GLLGAERVA----- 218 Query: 186 QQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 QA+ L DW+ P V+ GDFN +G + + + R ++ Sbjct: 219 -QAKALLGPDWLGD-PACHAPTVLLGDFN----AMGWSRAYRRLSGRLTDARRLTGDRRW 272 Query: 244 RCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 R ++ P +D+ + + I D +R SDH P+ Sbjct: 273 R-RGGATFPSRFPLLRVDHVFVSERVAVERIA--------VVDTPLARKA--SDHLPV 319 >gi|254448412|ref|ZP_05061873.1| sphingomyelinase C [gamma proteobacterium HTCC5015] gi|198262025|gb|EDY86309.1| sphingomyelinase C [gamma proteobacterium HTCC5015] Length = 348 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 98/320 (30%), Gaps = 56/320 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++++NI L + G + R + + D++ +QE + A + Sbjct: 45 LTVMTYNILQLPDVAGDWDDAQRLARLPDAIRNMA-----VQPDVLVIQEAMTDAARNAL 99 Query: 84 FPKNTWCIFYS---TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-----------SYP 129 + F + ++ + + AV + V VL + Sbjct: 100 EGLDDIYPFITPVVGLDCSGAGWDGTSGNCSNSPAVVRGGVMVLSRWPIEEQRQHIYQNS 159 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + D +S G + ++ G V+ H++S ++ S Q Sbjct: 160 QMWTGDYYSNKGF---AYVRIDKGGFDYHVVGTHMQS------DAGDFAVSQQTRMAQLD 210 Query: 190 WLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR---- 244 ++ WI + + P ++ GDFN ND + ++S I FP Sbjct: 211 EMRQWIDNRAISAADPVILTGDFN---VEHSRNDHLADMLQRSNSQISFPDPSIGSYSAL 267 Query: 245 ----CNANKNLR-----NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 AN +DY V + ++ I DD Sbjct: 268 DNLMTQANAYYYEYSQSYNDTLDYVVTRTDYLLPIVSADMQVIRLKADDSWYWDYMENIN 327 Query: 292 -------LSDHCPISIDYDF 304 LSDH P+ + + Sbjct: 328 STGMHSELSDHYPVVATFRY 347 >gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] Length = 344 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 105/337 (31%), Gaps = 63/337 (18%) Query: 24 VRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSDYTLLRQYAKNLDAD-IVFLQE 73 +RL ++NI + ++ + R + + +DAD IV ++ Sbjct: 1 MRLSTYNIEWFEALFDAQDQLQLDSAPSARHEISRGAQA-EAIADVLRAIDADGIVIIEA 59 Query: 74 MGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 S + + W + + ++ + ++ A + Sbjct: 60 PNSGKHQSTERALVRFAEWAGLRTRDVVMGFA---NDTRQEIAFLFDSNVLTAEHAPLDT 116 Query: 131 LGAKDSFSRAGNRRAVE---------------LLVEINGKKIWVLDIHLKSFCFLDSLEN 175 A V+ L+ G ++ HLKS + Sbjct: 117 ARAPRFDGTFEMDLDVDAKADLVRFSKPPMELLVTPRTGPPFHLIGAHLKSKAPHGARTP 176 Query: 176 TYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN-------------RKINY 217 + + S+ ++ QA WL+ + + E+ P V+ GD N R Sbjct: 177 EEARAMSIANRRKQLAQAVWLRARVEDRLEAGAPLVVMGDLNDGPGLDAYEALFGRSSVE 236 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQN----AYK 268 + + + DP+ + P ++ +A + +DY ++ A + Sbjct: 237 IIMGQELF---DPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQACAPR 293 Query: 269 FLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 + I F + Y + SDH P+++D D Sbjct: 294 WRIWHPFEDAACYGTPSLCHALLTASDHFPVTLDLDL 330 >gi|320654071|gb|EFX22139.1| hypothetical protein ECO7815_07649 [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 49/259 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHT 112 LR + + ADIV LQE+ + V + +P + F + + + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGHN------ 86 Query: 113 AIAV----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLK 165 AV N + + +D +R V ++ + GK I V+ +HL Sbjct: 87 --AVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL- 143 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 L + + Q L +W+ + + P ++AGDFN D Sbjct: 144 ------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR- 180 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + + E +R + + +D+ K + + + Sbjct: 181 QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP------ 234 Query: 286 KSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 LRTWRHLSDHAPLSAEIHL 253 >gi|182412613|ref|YP_001817679.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839827|gb|ACB74079.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 808 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 64/299 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-- 75 A A ++RL+++N+ + R + + D+V LQE+ Sbjct: 549 APAANRLRLMTYNV-----HGCSGMDGRVSPR------RVARVIAAHGPDLVALQEIDLG 597 Query: 76 ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + + + + + A+ R V ++ P Sbjct: 598 RRRSRAEDQAALIAHQLGLHMVFCPTVTRGQEHYGH----ALLSRWPIEVVKRKLLP--- 650 Query: 133 AKDSFSRA---GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 R R A+ V I + V+ HL LL + Sbjct: 651 ---HDPRGWWKEPRAALWARVWIGDTPVHVVTTHLGLG-----------RRERLLQMKML 696 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +W+ ++ V+ GDFN + + R S ++N+ Sbjct: 697 LSPEWLGGLRD-DERVVLCGDFN--LTPGSAPYGLMANRLQDAQAARDGHRPLSTFSSNR 753 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL----SDHCPISIDYDF 304 + +D+ + + + D++ L SDH P+ +D Sbjct: 754 PF---VRLDHIFISPH--------------FRVQDVRVPRSELTRVASDHLPLIVDLAL 795 >gi|254486528|ref|ZP_05099733.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] gi|214043397|gb|EEB84035.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] Length = 242 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 87/289 (30%), Gaps = 63/289 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ +R+ S+NI + W+ R + +DAD++ LQE Sbjct: 10 AAERHTIRVASYNIR----KAVGLDWRRDPHR-------IADVLAEVDADVIALQEADKR 58 Query: 78 NAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 V P + + S+ AI VR + + L Sbjct: 59 LGARAGVLPLQRLEAELGYRMVEVSMRPHSHGWQGNAILVRSHLRDYVAERISL------ 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + ++ +I L + L +Q L+ + Sbjct: 113 -PTMEPRGAVSVRLQEPELEIIGLHLGLTPGMR---------------RKQMLNLQKLMA 156 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +++ P ++AGDFN + + P + + R Sbjct: 157 ERE---HPVLLAGDFN---------EW------NTGRMPFAPPSTVVTPGPSFHARRPSA 198 Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D FV+ + + ++ R SDH PI +D F Sbjct: 199 QLDRFVLGPGLRS--VSSHVHQSPLSK--------RASDHLPIVVDIAF 237 >gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans] gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein [Herminiimonas arsenicoxydans] Length = 264 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 46/295 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI +GVS + + R L+Q + +D++FLQE+ + + Sbjct: 2 KLRITTYNI-----HKGVSSF-GARPR----IHALKQAINAMQSDVLFLQEVQGRHDLHA 51 Query: 83 VFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---F 137 + W + +H N ++ + L +P+L +++ Sbjct: 52 LKHATDWPELSQQDFLAGDSHQCAYGMNAVYD----HGHHGNALLSCFPILSSRNQNISD 107 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + +R + +V ++ IHL F S +Q L + ++ Sbjct: 108 HKYESRGILHCVVRAPEAEVHCFVIHL--GLFAGSR-----------KRQTAALIEAVSA 154 Query: 198 KKESLVPFVIAGDFN---RKIN-----YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 ES P +IAGDFN +++ LG + F + + Sbjct: 155 SAESGAPIIIAGDFNDWGNRLSEELRDTLGVTEVFDANLSRRGFGTYLRQLSGRGTKIQP 214 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +D+ + ES + + +LSDH PI + Sbjct: 215 ARTFPAAMPFLQLDRIYVRGFKVESAEVLH------GAMWGKLSDHAPIVANLQL 263 >gi|83745850|ref|ZP_00942907.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] gi|83727540|gb|EAP74661.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] Length = 318 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 95/330 (28%), Gaps = 91/330 (27%) Query: 12 FLVPCTASVAQKVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 V A +R+ +WN + L E+E + Sbjct: 38 IAVVFFARTDFPMRVATWNVNSLKVRLPHVLQWLGEREADATPI---------------- 81 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK 118 D++ LQE+ P + + + ++ + + +A+ RK Sbjct: 82 ------DLLCLQELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILARK 125 Query: 119 ---KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 R + ++ P + V ++ G + V+ + + LDS + Sbjct: 126 AAMPEGRDVIKNIPGFADEQQRI-------VAATYDVAGGPVRVISAYFPNGQALDSDKM 178 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSL 234 Y + L+DW+ + ++ ++ GDFN + +D W+ ++ Sbjct: 179 VYK------MRWLAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPE 232 Query: 235 IRFPKEKDSRCNANKNLR-------------NKIP---------IDYFVMDQNAYKFLIQ 272 R R ++ ID+ ++ + Sbjct: 233 ERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQRCES 292 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++ SDH P+ Sbjct: 293 CHI-------DRVPRGWEQPSDHTPVVAAL 315 >gi|331682296|ref|ZP_08382915.1| putative cytoplasmic protein [Escherichia coli H299] gi|331079927|gb|EGI51106.1| putative cytoplasmic protein [Escherichia coli H299] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLQLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|281177926|dbj|BAI54256.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE15] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + ++AGDFN ++ + Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GESVLVAGDFN---DWRQKANH 185 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 K + D + + +R + + +D + + Sbjct: 186 PLKVLAGLDEIFTRAHGRPARTFPVQFPLLR--LDRIYVKNASASAPTALPLRT------ 237 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 238 -----WRHLSDHAPLSAEIHL 253 >gi|21243041|ref|NP_642623.1| hypothetical protein XAC2306 [Xanthomonas axonopodis pv. citri str. 306] gi|21108551|gb|AAM37159.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 278 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 97/291 (33%), Gaps = 58/291 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 A+ ++++ LV+ N++ E + + K L D++ LQE+ Sbjct: 15 SPAAASREMTLVTLNLHHDREDWPARR------------AHIAKELKRLAPDVIALQEVI 62 Query: 75 -------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A+ + IF S + + + + A+ R++ + Q+ Sbjct: 63 ERRGSVENQAAWLARKLGYDY--IFASVDPVGAPKRYGN------AVLSRRRVLATQQRL 114 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L R A L V+++G+ + V HL + + +Q Sbjct: 115 LQPLDDY--------RVAAHLQVDVDGQPVNVYVTHL------NERADARGTGIRT--RQ 158 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 L D+I + P VIAGDFN ++ + D S+ R S Sbjct: 159 VADLLDFIAS-NSAQAPVVIAGDFNTAADTLDLQALRKGYG---DSYGSVHRNSDATVST 214 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N + ID+ QN + Y + G+ SDH Sbjct: 215 LNMHV-FDRPARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDH 258 >gi|15800541|ref|NP_286553.1| hypothetical protein Z1009 [Escherichia coli O157:H7 EDL933] gi|15830122|ref|NP_308895.1| hypothetical protein ECs0868 [Escherichia coli O157:H7 str. Sakai] gi|16128758|ref|NP_415311.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|24112158|ref|NP_706668.1| hypothetical protein SF0740 [Shigella flexneri 2a str. 301] gi|26246763|ref|NP_752803.1| hypothetical protein c0873 [Escherichia coli CFT073] gi|30062275|ref|NP_836446.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|74311333|ref|YP_309752.1| hypothetical protein SSON_0769 [Shigella sonnei Ss046] gi|89107641|ref|AP_001421.1| predicted DNase [Escherichia coli str. K-12 substr. W3110] gi|91209822|ref|YP_539808.1| putative DNase [Escherichia coli UTI89] gi|110804791|ref|YP_688311.1| hypothetical protein SFV_0773 [Shigella flexneri 5 str. 8401] gi|168764306|ref|ZP_02789313.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|168787004|ref|ZP_02812011.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|168799936|ref|ZP_02824943.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|170080449|ref|YP_001729769.1| DNase [Escherichia coli str. K-12 substr. DH10B] gi|170684095|ref|YP_001742893.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|191169284|ref|ZP_03031034.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|193064436|ref|ZP_03045517.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|193069403|ref|ZP_03050358.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194428175|ref|ZP_03060718.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194433120|ref|ZP_03065402.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209918036|ref|YP_002292120.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215485878|ref|YP_002328309.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217324324|ref|ZP_03440408.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218553374|ref|YP_002386287.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218557695|ref|YP_002390608.1| metal-dependent hydrolase [Escherichia coli S88] gi|218688576|ref|YP_002396788.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218694264|ref|YP_002401931.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218704168|ref|YP_002411687.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|227884248|ref|ZP_04002053.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|237707251|ref|ZP_04537732.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238900049|ref|YP_002925845.1| putative DNase [Escherichia coli BW2952] gi|256021140|ref|ZP_05435005.1| putative DNase [Shigella sp. D9] gi|256023614|ref|ZP_05437479.1| putative DNase [Escherichia sp. 4_1_40B] gi|260843033|ref|YP_003220811.1| putative DNase [Escherichia coli O103:H2 str. 12009] gi|260866957|ref|YP_003233359.1| putative DNase [Escherichia coli O111:H- str. 11128] gi|261225437|ref|ZP_05939718.1| putative DNase [Escherichia coli O157:H7 str. FRIK2000] gi|261258594|ref|ZP_05951127.1| putative DNase [Escherichia coli O157:H7 str. FRIK966] gi|291281787|ref|YP_003498605.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|293404090|ref|ZP_06648084.1| ybhP protein [Escherichia coli FVEC1412] gi|293409167|ref|ZP_06652743.1| ybhP protein [Escherichia coli B354] gi|293414069|ref|ZP_06656718.1| ybhP protein [Escherichia coli B185] gi|293433051|ref|ZP_06661479.1| ybhP protein [Escherichia coli B088] gi|298379871|ref|ZP_06989476.1| ybhP protein [Escherichia coli FVEC1302] gi|300816436|ref|ZP_07096658.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300898278|ref|ZP_07116629.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300907118|ref|ZP_07124784.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300920037|ref|ZP_07136496.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300993265|ref|ZP_07180312.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|301020719|ref|ZP_07184787.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|301024514|ref|ZP_07188190.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|301051290|ref|ZP_07198116.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|301306923|ref|ZP_07212967.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|307137414|ref|ZP_07496770.1| hypothetical protein EcolH7_04690 [Escherichia coli H736] gi|307313800|ref|ZP_07593417.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|309797967|ref|ZP_07692346.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|312969189|ref|ZP_07783396.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|331641303|ref|ZP_08342438.1| putative cytoplasmic protein [Escherichia coli H736] gi|331646007|ref|ZP_08347110.1| putative cytoplasmic protein [Escherichia coli M605] gi|331651793|ref|ZP_08352812.1| putative cytoplasmic protein [Escherichia coli M718] gi|331656807|ref|ZP_08357769.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331672300|ref|ZP_08373091.1| putative cytoplasmic protein [Escherichia coli TA280] gi|332282366|ref|ZP_08394779.1| conserved hypothetical protein [Shigella sp. D9] gi|77416769|sp|P0AAW3|YBHP_ECO57 RecName: Full=Uncharacterized protein ybhP gi|77416770|sp|P0AAW2|YBHP_ECOL6 RecName: Full=Uncharacterized protein ybhP gi|77416771|sp|P0AAW1|YBHP_ECOLI RecName: Full=Uncharacterized protein ybhP gi|77416772|sp|P0AAW4|YBHP_SHIFL RecName: Full=Uncharacterized protein ybhP gi|12513779|gb|AAG55161.1|AE005259_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26107162|gb|AAN79346.1|AE016757_250 Hypothetical protein ybhP [Escherichia coli CFT073] gi|1787008|gb|AAC73877.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|4062347|dbj|BAA35449.1| predicted DNase [Escherichia coli str. K12 substr. W3110] gi|13360327|dbj|BAB34291.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24050995|gb|AAN42375.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040520|gb|AAP16252.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|73854810|gb|AAZ87517.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91071396|gb|ABE06277.1| putative DNase [Escherichia coli UTI89] gi|110614339|gb|ABF03006.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|169888284|gb|ACB01991.1| predicted DNase [Escherichia coli str. K-12 substr. DH10B] gi|170521813|gb|ACB19991.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|189365678|gb|EDU84094.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|189373043|gb|EDU91459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|189377721|gb|EDU96137.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|190900673|gb|EDV60472.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|192928898|gb|EDV82511.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|192957356|gb|EDV87804.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194413735|gb|EDX30014.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194418617|gb|EDX34704.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209775978|gb|ACI86301.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775980|gb|ACI86302.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775982|gb|ACI86303.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775984|gb|ACI86304.1| hypothetical protein ECs0868 [Escherichia coli] gi|209911295|dbj|BAG76369.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215263950|emb|CAS08290.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217320545|gb|EEC28969.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218350996|emb|CAU96700.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218360142|emb|CAQ97691.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218364464|emb|CAR02146.1| putative metal-dependent hydrolase [Escherichia coli S88] gi|218426140|emb|CAR06960.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218431265|emb|CAR12143.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|222032521|emb|CAP75260.1| Uncharacterized protein ybhP [Escherichia coli LF82] gi|226898461|gb|EEH84720.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227839000|gb|EEJ49466.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|238862335|gb|ACR64333.1| predicted DNase [Escherichia coli BW2952] gi|257758180|dbj|BAI29677.1| predicted DNase [Escherichia coli O103:H2 str. 12009] gi|257763313|dbj|BAI34808.1| predicted DNase [Escherichia coli O111:H- str. 11128] gi|260450063|gb|ACX40485.1| Endonuclease/exonuclease/phosphatase [Escherichia coli DH1] gi|281600115|gb|ADA73099.1| Metal-dependent hydrolase [Shigella flexneri 2002017] gi|284920642|emb|CBG33705.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli 042] gi|290761660|gb|ADD55621.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|291323870|gb|EFE63292.1| ybhP protein [Escherichia coli B088] gi|291428676|gb|EFF01701.1| ybhP protein [Escherichia coli FVEC1412] gi|291434127|gb|EFF07100.1| ybhP protein [Escherichia coli B185] gi|291469635|gb|EFF12119.1| ybhP protein [Escherichia coli B354] gi|294491262|gb|ADE90018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli IHE3034] gi|298279569|gb|EFI21077.1| ybhP protein [Escherichia coli FVEC1302] gi|299880367|gb|EFI88578.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|300297049|gb|EFJ53434.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|300358067|gb|EFJ73937.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300398530|gb|EFJ82068.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|300401163|gb|EFJ84701.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300406673|gb|EFJ90211.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|300412984|gb|EFJ96294.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300531126|gb|EFK52188.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300837849|gb|EFK65609.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|306906440|gb|EFN36954.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|307552635|gb|ADN45410.1| endonuclease/exonuclease/phosphatase family [Escherichia coli ABU 83972] gi|307627800|gb|ADN72104.1| hypothetical protein UM146_13695 [Escherichia coli UM146] gi|308118455|gb|EFO55717.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|309701068|emb|CBJ00366.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli ETEC H10407] gi|312286591|gb|EFR14504.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|312945308|gb|ADR26135.1| putative DNase [Escherichia coli O83:H1 str. NRG 857C] gi|313650312|gb|EFS14724.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2a str. 2457T] gi|315060026|gb|ADT74353.1| predicted DNase [Escherichia coli W] gi|315135440|dbj|BAJ42599.1| hypothetical protein ECDH1ME8569_0743 [Escherichia coli DH1] gi|315257776|gb|EFU37744.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 85-1] gi|315287185|gb|EFU46597.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 110-3] gi|315292598|gb|EFU51950.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 153-1] gi|315619791|gb|EFV00310.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 3431] gi|320178501|gb|EFW53466.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella boydii ATCC 9905] gi|320192735|gb|EFW67376.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC1212] gi|320196715|gb|EFW71338.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli WV_060327] gi|320637652|gb|EFX07444.1| hypothetical protein ECO5101_22645 [Escherichia coli O157:H7 str. G5101] gi|320642778|gb|EFX11979.1| hypothetical protein ECO9389_02401 [Escherichia coli O157:H- str. 493-89] gi|320648234|gb|EFX16889.1| hypothetical protein ECO2687_18506 [Escherichia coli O157:H- str. H 2687] gi|320659694|gb|EFX27250.1| hypothetical protein ECO5905_24328 [Escherichia coli O55:H7 str. USDA 5905] gi|320664164|gb|EFX31315.1| hypothetical protein ECOSU61_00998 [Escherichia coli O157:H7 str. LSU-61] gi|323159720|gb|EFZ45698.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli E128010] gi|323165708|gb|EFZ51494.1| endonuclease/Exonuclease/phosphatase family protein [Shigella sonnei 53G] gi|323172094|gb|EFZ57733.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli LT-68] gi|323175592|gb|EFZ61187.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1180] gi|323185054|gb|EFZ70420.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1357] gi|323190916|gb|EFZ76183.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli RN587/1] gi|323379415|gb|ADX51683.1| Endonuclease/exonuclease/phosphatase [Escherichia coli KO11] gi|323938145|gb|EGB34405.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1520] gi|323942663|gb|EGB38828.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E482] gi|323947052|gb|EGB43065.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H120] gi|323953547|gb|EGB49413.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252] gi|323958079|gb|EGB53788.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H263] gi|323971955|gb|EGB67176.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TA007] gi|324009624|gb|EGB78843.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 57-2] gi|324018520|gb|EGB87739.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 117-3] gi|324116214|gb|EGC10136.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1167] gi|326338324|gb|EGD62153.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1125] gi|326346302|gb|EGD70040.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1044] gi|330910533|gb|EGH39043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli AA86] gi|331038101|gb|EGI10321.1| putative cytoplasmic protein [Escherichia coli H736] gi|331044759|gb|EGI16886.1| putative cytoplasmic protein [Escherichia coli M605] gi|331050071|gb|EGI22129.1| putative cytoplasmic protein [Escherichia coli M718] gi|331055055|gb|EGI27064.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331070495|gb|EGI41859.1| putative cytoplasmic protein [Escherichia coli TA280] gi|332091084|gb|EGI96174.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 155-74] gi|332104718|gb|EGJ08064.1| conserved hypothetical protein [Shigella sp. D9] gi|332759689|gb|EGJ89992.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 4343-70] gi|332760512|gb|EGJ90801.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2747-71] gi|332763280|gb|EGJ93522.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-671] gi|332767952|gb|EGJ98138.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2930-71] gi|333006910|gb|EGK26406.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri VA-6] gi|333007139|gb|EGK26631.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-218] gi|333021184|gb|EGK40440.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-304] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|331662145|ref|ZP_08363068.1| putative cytoplasmic protein [Escherichia coli TA143] gi|331060567|gb|EGI32531.1| putative cytoplasmic protein [Escherichia coli TA143] Length = 253 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|152974395|ref|YP_001373912.1| sphingomyelin phosphodiesterase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023147|gb|ABS20917.1| Sphingomyelin phosphodiesterase [Bacillus cytotoxicus NVH 391-98] Length = 330 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 114/309 (36%), Gaps = 41/309 (13%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T+S + ++++ N+ LS L+ N ++ +D Y K + D+V L E+ Sbjct: 29 TSSDSDTFKIMTHNVYMLSTN----LYPNWGQKERADLIGEANYIK--NQDVVILNEVFD 82 Query: 77 YNA-------VAKVFPKNTWCI-----FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 A + K +P T + + L N+S + +A+ K V Sbjct: 83 NKASDSLLQNLKKEYPNQTAVLGRVNGDMWDQTLGNYSSVAPEDG---GVAIVSKWPIVE 139 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + Y + + V ++ + + I V+ HL++ D+ SPS S+ Sbjct: 140 KVQYVFQKGCGPDNLSNKGF-VYTKIKKDDRFIHVIGTHLQA---EDNQCGNISPS-SVR 194 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNR---KINYLGNNDDFWKTIDPNDSLIR-FPK 239 + Q + ++++I +K +V+ GD N N+ + +KT+ + Sbjct: 195 TNQLKEIQEFIQKKNIPSDEYVVIGGDMNVNKINSNHTSEYESMFKTLHASVPSYTGHTA 254 Query: 240 EKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNED-----DIKSRGK 290 D+ N+ +DY V ++ E+ + + K+ Sbjct: 255 TWDATTNSIAKYNFPEAPAEYLDYIVTSKDHATPTYLENKVLQPKSPEWSVTSWFKTYTY 314 Query: 291 R-LSDHCPI 298 SDH P+ Sbjct: 315 NDYSDHYPV 323 >gi|329963050|ref|ZP_08300830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328529091|gb|EGF56021.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 287 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 94/305 (30%), Gaps = 61/305 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 S + V ++S+NI + ++ + WK R +R Y D DI+ QE+ Sbjct: 22 QVSAPEPVNVMSFNIRYDNPEDSLDNWKYRKDRAA---NAIRFY----DVDILGTQEVLH 74 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------ 128 + + P + + ++A+ +K+ +L Y Sbjct: 75 NQLEDLKQRLP--EYGVIGVGREDGKEKGE------YSALWYKKERFNLLDSGYFWLSET 126 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P + + A R A ++ +GK+ + L+ HL SL+ Sbjct: 127 PEVAGSKGWDGACERIASWAKLQDKASGKEFFALNTHL-----DHVGVVARREGISLILD 181 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + L D +P ++ GDFN +D DP++ + S Sbjct: 182 RINALSD--------GLPVIVTGDFN----SEPESDVIKHVTDPSNPEHLTDARQASPIV 229 Query: 247 ANKNLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + Y LSDH Sbjct: 230 YGPAWSFHDFGKIPYDKRPLIDYVFVRNR---------LKVLRYGVLAETEENAFLSDHA 280 Query: 297 PISID 301 PI + Sbjct: 281 PILVT 285 >gi|260854081|ref|YP_003227972.1| putative DNase [Escherichia coli O26:H11 str. 11368] gi|257752730|dbj|BAI24232.1| predicted DNase [Escherichia coli O26:H11 str. 11368] gi|323155689|gb|EFZ41860.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EPECa14] Length = 253 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPKGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|255036462|ref|YP_003087083.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254949218|gb|ACT93918.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 265 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 65/299 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P Q+ +++++NI+ + D + + D V LQE+ Sbjct: 22 PDQPVKKQRFKVMTYNIHHCNPPSAG---------DKIDVEAIAKVINAEKPDFVALQEV 72 Query: 75 G--------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 N ++ ++S + I+H D +AV K V Sbjct: 73 DVNTERSGKGKNQAQQLAALTGMKFYFS--KAIDHQGGD------YGVAVLTKFPIVDSA 124 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y L + AV + + N +K+ HL N +L Sbjct: 125 KYALPIRPELKEEDRTIAAVTVQLPDN-RKLIFASTHL-----GLKEPN------RMLQA 172 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + W + +P ++ GDFN + D + + + C Sbjct: 173 ETIW-----KHFGNTELPMILGGDFN-----ATPDSPVIAFFDQHFTRSC------TNCK 216 Query: 247 ANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K ID+ + ++ S++ + SDH P++ ++ Sbjct: 217 PTIPVEVPKKTIDFIMHKKD----------SQLKSANTKVIDEKYA-SDHLPVTAEFTL 264 >gi|110640994|ref|YP_668722.1| hypothetical protein ECP_0804 [Escherichia coli 536] gi|191174511|ref|ZP_03036010.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300992083|ref|ZP_07179785.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|110342586|gb|ABG68823.1| hypothetical protein YbhP [Escherichia coli 536] gi|190905224|gb|EDV64864.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300305412|gb|EFJ59932.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|324011114|gb|EGB80333.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 60-1] Length = 253 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYLEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|283784549|ref|YP_003364414.1| endonuclease/exonuclease/phosphatase [Citrobacter rodentium ICC168] gi|282948003|emb|CBG87567.1| putative endonuclease/exonuclease/phosphatase [Citrobacter rodentium ICC168] Length = 253 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 85/258 (32%), Gaps = 47/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRTVGADIVCLQEVLGAHEVHPLHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G + R + ++ + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVAGGEK-------RGVLYCRIVPPQLDRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L + + Q + L DW+ + P V+AGDFN D K Sbjct: 144 -----GLREAHRQA------QLKMLADWVNALPD-GEPVVVAGDFN---------DWRQK 182 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P + + + + +D+ K S + + Sbjct: 183 ASLPLKKTAGLDEIFTH-AHGRPARTFPVSLPLLPLDRIYVKNANTSSPTVLP------L 235 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 236 RSWRHLSDHAPLSAEIHL 253 >gi|88802681|ref|ZP_01118208.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] gi|88781539|gb|EAR12717.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] Length = 329 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 37/299 (12%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-----TLLRQYAKNLDADIVFLQEMGS 76 +++SWN+ + + + L + +DA +V LQE S Sbjct: 49 DSFKVLSWNVAHFVDSFDDPYIDSKRENQPDSLMGNKVASLVVALRRIDAAVVVLQEFES 108 Query: 77 YNAVAKV----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + F + + I NV + Sbjct: 109 AKFLRSLANEHLQDMGYKYFADVPSHGWYMNVVMMSKFPLGIIYGYGNVTTPVLGASIAS 168 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 N R + V + ++L +HLK+ + ++ Q +L Sbjct: 169 GATETQNTLNTRMWSIDVYPSPNYNFLLTGVHLKAG--------RGERNVAMRKGQINFL 220 Query: 192 KDWITQ--KKESLVPFVIAGDFNR-----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 K + K++ ++ GDFN +IN + + D+ Sbjct: 221 KQQFKRFLKEDKNKNILVLGDFNSVQGSEEINLFLQEKNKREKFIDPLPDSAMTHTSDAP 280 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K +DY +++ N YK S + + +SDH P++I++ Sbjct: 281 ---------KRRLDYVLINTNMYKEYKVGSAKVSSLFS---PLKMREISDHLPVTINFT 327 >gi|32475548|ref|NP_868542.1| hypothetical protein RB8783 [Rhodopirellula baltica SH 1] gi|32446090|emb|CAD75919.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 321 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 98/306 (32%), Gaps = 40/306 (13%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + L + T + +++NI L+ + LW R + + A Sbjct: 47 MLLFGGIGARTVVADESFTAMTYNIRYLNTHDRQDLW---SMRRSKVIETIAS------A 97 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ W + + + + Sbjct: 98 DVVGLQEVTVQQLHDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLS 157 Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + + A R +++ +++ + V++ H F +N S Sbjct: 158 ETPTVVGSKGWDAALPRTMTWMVLRRKLDRAEFLVINSH-----FDHRGQNAREQS---- 208 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + + Q+ + +P ++ GDFN + L + + K +D D + P Sbjct: 209 ---GRLVAAEVDQR-ATDLPVIVMGDFNAMPDSAPLKALQSGEKV-KLLDARDEVDGKPT 263 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPI 298 N K ++ ID+ +++ Y D ++ R SDH PI Sbjct: 264 GPTGTWNGFKAIQPDRRIDHVLVNDR---------VVVQEYRTLDPRTEAGRYASDHLPI 314 Query: 299 SIDYDF 304 +I D Sbjct: 315 AIRIDL 320 >gi|262283216|ref|ZP_06060983.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] gi|262261468|gb|EEY80167.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] Length = 779 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 + K+ + S+NI S + T + N DI+ L Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPDEK------VTKIANSFINEIHSPDIITL 399 Query: 72 QEMGS----------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ A++ + + ++I A Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPFDGQDGGKPGSNIRVA 458 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 459 FLYNPDRVKLVEKEAGKSDEAASFSGGHLVKNPARIDPTNPAFTKVRKSLAAEFEFKGQH 518 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGD 210 + V+ HLKS D++ + P+ ++A+ L +++ + ++ + FV+ GD Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAVQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K I N+ + + + + + +D + +N Sbjct: 579 FN-----DFEFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 I R SDH P+ + DF Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663 >gi|164687865|ref|ZP_02211893.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] gi|164603140|gb|EDQ96605.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] Length = 240 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 88/243 (36%), Gaps = 63/243 (25%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD----SNNDIHTAIAVR 117 K +ADI+ LQE+ +KV + + S + +N + N+ + +A Sbjct: 49 KKSNADIICLQEVNES---SKV----GFQV-SSLKEELNMNLHFGANVVKNNTNYGLATY 100 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + Q+ L ++ R + V + KK+ +++IHL + Sbjct: 101 SKYKIISQKHVYLSSTREQ------RGFLHTTVRVKDKKLHIINIHLGLG-------DKE 147 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGN-NDDFWKTIDPNDSLI 235 +Q L+++I FV+ GDFN ++ D + ++ ++ L Sbjct: 148 R------KKQINELQNYIK--GLKKDYFVVLGDFNEGNLSLDDEIIIDVAEKLNKSNILT 199 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY + N + +S+ ++ K +SDH Sbjct: 200 FSTELDR--------------IDYMFVSNN----IEVKSYEVLI----------KNMSDH 231 Query: 296 CPI 298 PI Sbjct: 232 YPI 234 >gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] Length = 269 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 80/280 (28%), Gaps = 58/280 (20%) Query: 55 TLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPKNTWCIFYSTER---------------- 97 L Y + D DI+ LQE+ + A + Sbjct: 17 DKLVPYIASSDPDILCLQEVVHTPAATQDWLSYRDHGVELPQRANFFRDVAEALPDHVAI 76 Query: 98 ---------LINHSKRDSNNDIHTAIAVRKKNVRVLQQS-----YPLLGAKDSFSRAGNR 143 ++ S + T VRK + Q + R+ Sbjct: 77 FCPAAQGDLWQGETRYPSQFGLAT--FVRKSIAIIAQAQGFVHGVFSADGYGNHPRSRTA 134 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ + G+ + + +H ++ QA+ L ++ E Sbjct: 135 HAIRVFDFTTGQPVVIAHMH---GLRDLEGKHDI----PARLHQAKRLVQFVKNIAEDGD 187 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN + + + ++ D + + + + DY +++ Sbjct: 188 RVIVCGDFN-----VLPDSRTFAVLNELDLVELVTTRGFTDTRTSHYAKPNRYADYLLVN 242 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ R +SDHCP+ +++ Sbjct: 243 P---------AVKVSQFDV----VRQPEVSDHCPLLLEFS 269 >gi|113866485|ref|YP_724974.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113525261|emb|CAJ91606.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 260 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 105/289 (36%), Gaps = 57/289 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 K+R+V++NI +GV+ + R +R +DADIVFLQE+ Sbjct: 2 KLRVVTYNI-----HKGVTGI-SRRPR----IQNVRAGLHAMDADIVFLQEVQDRNDRLV 51 Query: 80 VAKVFPKNTWCI-FYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A +F + + +T+ + + + + H A+ ++ ++ ++ L D Sbjct: 52 AAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSEN---LDISDH 108 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + +++G + ++ +H F + QA+ L + + Sbjct: 109 --RFEQRGLLHAVADVHGVETHLICVH-----FGLFARSRVR--------QAEALVERVR 153 Query: 197 QKKESLVPFVIAGDF---NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + +P VIAGDF N +++ I + + +R + + Sbjct: 154 TVVPAGMPLVIAGDFNDWNHRLD---------AQICNTLGAVEASHARGARLHTFPSHMP 204 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D + Y+ + + SDH P+ + Sbjct: 205 WWQLDRIYV--RGYEIERAHAL---------TGRDWAQRSDHVPLVAEL 242 >gi|33866339|ref|NP_897898.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] gi|33639314|emb|CAE08322.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] Length = 278 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 73/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N RT + + + D++ LQE + Sbjct: 1 MRIATWNVN--------------SVRTR--LEQVLCWLEQTKPDLLCLQETKVDDPLFPM 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F W + ++ N A+ R+ V L + G Sbjct: 45 QAFENAGWQVSIHGQKSYNG----------VALVSREPLEDVRCGFVGELPDDAEAATLG 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLLSQQAQWLKDWITQK 198 +R V + + VL++++ + L S + Y + C LK ++ + Sbjct: 95 EQRRVISGLLDG---VRVLNLYVPNGSSLSSEKYPYKLTWLGC---------LKRYLDAQ 142 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEK--------DSR 244 E P + GDFN + +D + D+L + + Sbjct: 143 AERGEPLCMVGDFNIALEARDIHDPDRLSGSVMASDAERDALREALGNRLQDAFRMFEPD 202 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ + + S + SDH Sbjct: 203 AGHWSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSCSI-------HKQLRGNVQPSDH 255 Query: 296 CPISIDYDF 304 P+S+D D+ Sbjct: 256 APVSVDLDW 264 >gi|301383299|ref|ZP_07231717.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302063704|ref|ZP_07255245.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] Length = 382 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 101/338 (29%), Gaps = 65/338 (19%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---- 212 + V++ HL + D + +Q ++ + + + P++I GDFN Sbjct: 232 LAVINTHLATAKPGDGTAH----------EQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281 Query: 213 -----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 W+ P +S P D + Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEK------YPMIPNNTESSGTDRSQWLTHFPNDSRI 335 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + S S + + +SDH P+ Sbjct: 336 NGPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 373 >gi|27366657|ref|NP_762184.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6] gi|27358223|gb|AAO07174.1| hypothetical protein VV2_0202 [Vibrio vulnificus CMCP6] Length = 322 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 111/334 (33%), Gaps = 71/334 (21%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 + + S N+ N L+ ++ S T +++ L Q + ++AD+V QE+ S + Sbjct: 2 ITIASCNLFNFLAPPGAY--YEFSNILTDNEWNKKTTWLTQQLRAMNADVVAFQEVFSPD 59 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL------- 131 A+ + + F ++ + + + AIA R + + Sbjct: 60 ALNTLTSDLGYPYFVCLDK-PHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSEN 118 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKS------FCFLDSLENTYSPS---- 180 + ++ +R + ++E+ + V+ +HLKS + PS Sbjct: 119 SDSVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVG 178 Query: 181 --CSLLSQ--QAQWLKDWITQ-KKESLVPFVIAGDFNRKIN---------------YLGN 220 S + + +A L +I + P VI GDFN IN Sbjct: 179 SWLSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPFVDESNTPLLKDV 238 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-----------ANKNLRNKIPIDYFVMDQNAYKF 269 D + D + S+ A +N + + I + V+ Sbjct: 239 RDWLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKH--- 295 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L+ SF + SDH +++ D Sbjct: 296 LVNPSFEVDQFA-----------SDHAFVAVTID 318 >gi|77461149|ref|YP_350656.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77385152|gb|ABA76665.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 375 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 99/320 (30%), Gaps = 48/320 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD---------YTLLRQYAKNLD 65 P Q +++++WN+ L+ + W + + + + ++ Sbjct: 61 PPMLVPGQALKVMTWNVQYLAGK-RYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQ 119 Query: 66 ADIVFLQEMGSYNAVA------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK- 118 D+V LQE+ + K+ + ++ + + + R+ Sbjct: 120 PDVVLLQELDDGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDPHIFGSVGRQL 179 Query: 119 ------KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 + + P+ A + + A+ +G ++ V + HL Sbjct: 180 ATLSRYRIEHAERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHL------ 233 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKI----NYLG 219 + P L Q + + + + P++I GDFN R++ Sbjct: 234 ---DRATQPD-DTLQAQVTAVAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPY 289 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + D + +I + S + K L + P D + + + S Sbjct: 290 SADSALHVLWDKYPMI-PTNNEASGIDRAKWLTH-YPNDPGLNGPDRTVDYLFYSPKIKR 347 Query: 280 YNEDDIKSRGKRLSDHCPIS 299 + R+SDH P+ Sbjct: 348 VEATVRQDDTLRISDHLPVI 367 >gi|264679401|ref|YP_003279308.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] gi|262209914|gb|ACY34012.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] Length = 260 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 96/316 (30%), Gaps = 92/316 (29%) Query: 23 KVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +++ +WN ++ L+ +L +K T + + Sbjct: 2 TMKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHM------------AF 49 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPL 130 +E Y AV+ + +A + + R + ++ P Sbjct: 50 EE-AGYKAVS------------------------HGQKTYNGVAWITRDTGRDVVRNIPG 84 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L + + + ++ +I +++ + + S + Y + Q Sbjct: 85 LDDEQARI-------IATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQA 131 Query: 191 LKDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---ND 232 L DWI + V+ GDFN I++ D ++ + +D Sbjct: 132 LHDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSD 191 Query: 233 SLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + + S + ID+ ++ + + S D Sbjct: 192 AFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPR 244 Query: 288 RGKRLSDHCPISIDYD 303 + K+ SDH P+ + D Sbjct: 245 KNKQPSDHAPVVVTLD 260 >gi|218699162|ref|YP_002406791.1| putative metal-dependent hydrolase [Escherichia coli IAI39] gi|218369148|emb|CAR16903.1| putative metal-dependent hydrolase [Escherichia coli IAI39] Length = 253 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 67/268 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIENYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKIN 216 L L + + Q L +W+ + + P ++AGDF N + Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFNDWRQKANHPLK 188 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D+ + + +R + + +D + + Sbjct: 189 VQAGLDEIFTR----------AHGRPARTFPVQFPLLR--LDRIYVKNASTSAPTALPLR 236 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 T-----------WRHLSDHAPLSAEIHL 253 >gi|121603898|ref|YP_981227.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] gi|120592867|gb|ABM36306.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] Length = 375 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 84/265 (31%), Gaps = 28/265 (10%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVA----KVFPKNT-WCIFYSTERLINHSKRDSNNDIHT 112 + L+AD++ + E + +V + + + ++ + + + I Sbjct: 119 ARVIATLNADVLGVMEAEDRTTLRLFNEQVLGETSIDHLLFNAYHHVMLVDGNDDRGIDV 178 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + R+ VL + A A L +GK++WVL H KS + + Sbjct: 179 GLLTRRDYP-VLSIRSHVHDADAQGLIFSRDCAEYQLGLPSGKRLWVLLNHFKSKGYGEQ 237 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDFWKT---I 228 N +QA +++ +++ GD N ++ + + + Sbjct: 238 AANNAKR-----KRQAARVREIYDAHLAEGDEWLVMMGDLN-EVPGNAPLNPLLREGSSL 291 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS----------EI 278 ++ + N K DY ++ + + + Sbjct: 292 RDVAGHPQYDNGGRPGTHGNCTASGKF--DYILLSPGLFDKVKAAGVERRGMWGGTNGTL 349 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ + SDH + ++ D Sbjct: 350 WPHFKEVTRAEEAASDHAAVWVELD 374 >gi|220932969|ref|YP_002509877.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168] gi|219994279|gb|ACL70882.1| Endonuclease/exonuclease/phosphatase [Halothermothrix orenii H 168] Length = 281 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 62/256 (24%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI-- 110 D + + K D+DI+ L E+ + + + +L + N Sbjct: 68 DLDRIARVLKKTDSDIIGLNEVD--RGLKR--SGFQHQVQILARKLKMNYAYGPNLQTGE 123 Query: 111 -HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 AV + V+ + P++ + + ++ G ++ ++ HL Sbjct: 124 GSYGNAVLSKYPISEVINKPLPVIDSTEKRGLLQ-----AIVSLPGGPELKIMVTHL--- 175 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWK 226 D E QQ WI + ++ PF++ GDFN++I Sbjct: 176 -STDFKER---------EQQL----KWINEYTNNIETPFILMGDFNQRIP---------- 211 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 I+ K A + ID + N F Y D + Sbjct: 212 AINLEGLYPLATNVKTYPSTAPE-----ELIDLVFSNYN---------FRVEEYTIDTMA 257 Query: 287 SRGKRLSDHCPISIDY 302 SDH P+ + Sbjct: 258 ------SDHLPVIVKL 267 >gi|115379792|ref|ZP_01466863.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|310820726|ref|YP_003953084.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115363210|gb|EAU62374.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|309393798|gb|ADO71257.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 254 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 77/258 (29%), Gaps = 58/258 (22%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + + AD++ LQE+G + +V T+R +H Sbjct: 21 DLHRVGEVLRETHADVIALQEVGDFRSV--------------TDREDQPEHLADMLGLHM 66 Query: 113 AI---AVRKK---------NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 A V+ + +LQ L R R ++L GK + V Sbjct: 67 AFGPNVVKAGRRYGNAILTRLPILQSKNYDLSVPGREPRGALRCDLDLGA---GKALHVF 123 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 +HL S+ Q+ L I Q P V+ GDFN Sbjct: 124 CLHL-----GLSIGERRR-------QERLLLSADILQDAARKDPVVVCGDFNY-----WG 166 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 N + + + +R ++ + +D +D I SE+ Sbjct: 167 NKPVPALVRQAIHDVALELDAPARTYPSRLPMLR--LDRIFVDTGVRPISIHPHRSELAS 224 Query: 281 NEDDIKSRGKRLSDHCPI 298 SDH P+ Sbjct: 225 VA----------SDHLPL 232 >gi|157160265|ref|YP_001457583.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|170020854|ref|YP_001725808.1| endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188495117|ref|ZP_03002387.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194438459|ref|ZP_03070549.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|253774207|ref|YP_003037038.1| endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160867|ref|YP_003043975.1| putative DNase [Escherichia coli B str. REL606] gi|300929408|ref|ZP_07144877.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|312970864|ref|ZP_07785043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|157065945|gb|ABV05200.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|169755782|gb|ACA78481.1| Endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188490316|gb|EDU65419.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194422683|gb|EDX38680.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|242376582|emb|CAQ31291.1| predicted DNase [Escherichia coli BL21(DE3)] gi|253325251|gb|ACT29853.1| Endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972768|gb|ACT38439.1| predicted DNase [Escherichia coli B str. REL606] gi|253976988|gb|ACT42658.1| predicted DNase [Escherichia coli BL21(DE3)] gi|300462608|gb|EFK26101.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|310336625|gb|EFQ01792.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|323963037|gb|EGB58608.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H489] gi|332342122|gb|AEE55456.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 253 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLQT- 237 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 238 -----WRHLSDHAPLSAEIHL 253 >gi|297200389|ref|ZP_06917786.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197709508|gb|EDY53542.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 275 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 87/298 (29%), Gaps = 50/298 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +R+V+WN+ + R + LR+ L D+V LQE+ GS N Sbjct: 4 MRVVTWNLWW--------RFGPWEARQKAILAALRE----LRPDVVGLQEVWSAGSENLA 51 Query: 81 AKVFPKNTWCIFYSTERLINH-SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ +R + + AV + + + L +D Sbjct: 52 EWLAGELGLHWAWAASPASERWQRRIGDPGVEVGNAVLSRWPVIDRAVLRLPAPEDLDD- 110 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-K 198 R A + I HL S + C QQ L +++ + Sbjct: 111 --GRLAFHTRLAGPSYDIPFFTTHLTS------APTASAIRC----QQVTALAEFVATHR 158 Query: 199 KESLVPFVIAGDFNRKINYLGNND-DFWK--TIDPNDSLIR-----------FPKEKDSR 244 + P VI GDFN + +++ + P P Sbjct: 159 SGTDFPPVITGDFN---AWPDSDEIRLFGGYKTAPAAPGQLFLDAWEYANPTAPSATWDP 215 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 N + IDY + L + D G SDH + D Sbjct: 216 ANPYVRMSPPARIDYIHVGLAGPAGL---GHVLKVRRAGDGPVDGVWPSDHLAVVADL 270 >gi|121999062|ref|YP_001003849.1| exodeoxyribonuclease III Xth [Halorhodospira halophila SL1] gi|121590467|gb|ABM63047.1| Exodeoxyribonuclease III [Halorhodospira halophila SL1] Length = 267 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 93/304 (30%), Gaps = 74/304 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L + ++ +A++ ++ LQE Sbjct: 1 MKIASWNVNSLKVR----------------LPQVKAWAQSATPSVIALQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + + + + + +AV + + + P Sbjct: 37 VPDDQFP--LKALQEAGYRAAFAGQRTYNGVAVLARSAPQDVVTDLPGFADTQ------- 87 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V + V+++++ + + S + Y + + L W+ ++ E+ Sbjct: 88 RRVLACTVS----GVRVINLYVPNGQEVGSEKYGYK------LRWLEALHHWVARELEAH 137 Query: 203 VPFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKDSRC---------- 245 V+ GDFN +D + + + Sbjct: 138 EHVVVLGDFNIAPQAADVHDPAEWEGKVLFSQSERDALRGLLNLGLVDTFRLFEQPEGQF 197 Query: 246 -----NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N RN+ ID + + + D R +R SDH P+ Sbjct: 198 SWWDYRVNSFKRNRGLRIDLILASSALARACVAS-------RVDVEPRRWERPSDHAPVV 250 Query: 300 IDYD 303 ++D Sbjct: 251 AEFD 254 >gi|163787900|ref|ZP_02182346.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159876220|gb|EDP70278.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 340 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 53/243 (21%) Query: 66 ADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +I+ LQE + N + N S +D+ V++ +V Sbjct: 134 PEILCLQEYRKDDP-----IVLDNYYNF--------NASHKDT---------VKRG--QV 169 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-- 181 + +P++ + + + + I V ++HL+S +E + + Sbjct: 170 VFSKFPIINSGSLEFPNTFNNGIFVDIVKQKDTIRVYNLHLQSSGIQTDVEALKNETSDN 229 Query: 182 ------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S Q + ++ ++ K + ++ GDFN Y +K I N+ + Sbjct: 230 LFKQVGSTFKLQQEQVELFLKHKSKCNYKTIVTGDFN-NTAYSY----IYKEIKGNNLVD 284 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 F + + + ID+ + D++ + + K+ +LSDH Sbjct: 285 TFEEAGNGFGKTYDFKFFPMRIDFILADKD--------------FTVNGFKTYDVKLSDH 330 Query: 296 CPI 298 PI Sbjct: 331 YPI 333 >gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] Length = 333 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 105/344 (30%), Gaps = 76/344 (22%) Query: 24 VRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+ ++N+ L E + S ++ +R L LDAD V + E Sbjct: 1 MRIATYNVEWFASLFDDAGHLLEDDDWSARRDVTRRDQ--LNALGAVFGALDADAVMVVE 58 Query: 74 MGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +A V + + + A+ + L+ + L Sbjct: 59 APDSHARRDGVAALRNFAAHFGLRAREAVMGYVNQTQQEIALLY---DPDALEVRHDPLD 115 Query: 133 AKDSFSRAGNRRAVEL-----------------LVEINGKKIWVLDIHLKSFCFLDSLEN 175 R +++ + G ++ ++ +H+KS + Sbjct: 116 LGAPRFDKQLRIDLDIDSAPETVRFSKPPLELAVTTRAGNRLRLIGVHVKS-----KAPH 170 Query: 176 TYSPSCSLLS----------QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + +L Q WL+ + + ++ GDFN L + + Sbjct: 171 GARSAAEILRISIANRRKQLAQCIWLRRRVEAQLARGDSLIVLGDFNDGPG-LDEYEKLF 229 Query: 226 ------------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQ 264 + + +D + + + R ++P +DY ++ Sbjct: 230 GRSGVEIVLGIGEELQLHDPHAAAILSRPTLARPSSA-RFRVPPDGRFLAAMLDYVMVSP 288 Query: 265 ----NAYKFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + I F + L+ + D++ SDH P+S+D D Sbjct: 289 DLAARYPAWRIWHPFEDPALFADPDLRHALLTASDHFPVSLDLD 332 >gi|188591189|ref|YP_001795789.1| metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|170938083|emb|CAP63067.1| putative metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 260 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 89/248 (35%), Gaps = 47/248 (18%) Query: 64 LDADIVFLQEM---GSYNAVAKVFPKNTWCI-FYSTERLIN--HSKRDSNNDIHTAIAVR 117 +DADIVFLQE+ A +F + + +T+ + + + + H A+ Sbjct: 33 MDADIVFLQEVQDRNDRLVAAALFDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAIL 92 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ ++ ++ L D R R + + +++G + ++ +H Sbjct: 93 SRHPILMSEN---LDISDH--RFEQRGLLHAVADVHGVETHLICVH--------FGLFAR 139 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF---NRKINYLGNNDDFWKTIDPNDSL 234 S + +QA+ L + + + VP VIAGDF N +++ I Sbjct: 140 SRA-----RQAEALVERVKNVVPADVPLVIAGDFNDWNHRLD---------AQICNTLGA 185 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + +R + + +D + Y+ + + SD Sbjct: 186 VEASHARGARLHTFPSHMPWWQLDRIYV--RGYEIERAHAL---------TGRDWAQRSD 234 Query: 295 HCPISIDY 302 H P+ + Sbjct: 235 HVPLVAEL 242 >gi|37676369|ref|NP_936765.1| hypothetical protein VVA0709 [Vibrio vulnificus YJ016] gi|37200911|dbj|BAC96735.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 322 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 111/334 (33%), Gaps = 71/334 (21%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 + + S N+ N L+ ++ S T +++ L Q + +DAD+V QE+ S + Sbjct: 2 ITIASCNLFNFLAPPGAY--YEFSNILTDNEWNKKTTWLTQQLRAMDADVVAFQEVFSPD 59 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------SYPLL 131 A+ + + F ++ + + + AIA R + Y Sbjct: 60 ALNTLTSDLGYPYFVCLDK-PHVTDEFIYSKPVLAIASRWPVIESRLVRLKDCFGDYSEN 118 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKS------FCFLDSLENTYSPS---- 180 + ++ +R + ++E+ + V+ +HLKS + PS Sbjct: 119 SDSVTDNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVG 178 Query: 181 --CSLLSQ--QAQWLKDWITQ-KKESLVPFVIAGDFNRKIN---------------YLGN 220 S + + +A L +I + P VI GDFN IN Sbjct: 179 SWLSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDV 238 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-----------ANKNLRNKIPIDYFVMDQNAYKF 269 D + D + S+ A +N + + I + V+ Sbjct: 239 RDWLREQPIFTDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKH--- 295 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L+ SF + SDH +++ D Sbjct: 296 LVNPSFEVDQFA-----------SDHAFVAVTID 318 >gi|17546312|ref|NP_519714.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] gi|17428609|emb|CAD15295.1| probable exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] Length = 269 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 93/313 (29%), Gaps = 81/313 (25%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ P + + + ++ + + +A+ + + + + Sbjct: 39 ELK--------LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRN 88 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 D R V ++ G + V+ + + LDS + Y + L+ Sbjct: 89 IPDFADEQQ--RVVAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQ 140 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFP------------- 238 DW+ + + ++ GDFN + +D W+ ++ R Sbjct: 141 DWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAF 200 Query: 239 -----KEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++K + + ID+ ++ N + D + Sbjct: 201 RMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPNLARLCESCHI-------DRVPRGW 253 Query: 290 KRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 254 EQPSDHTPVVAAL 266 >gi|217977845|ref|YP_002361992.1| exodeoxyribonuclease III [Methylocella silvestris BL2] gi|217503221|gb|ACK50630.1| exodeoxyribonuclease III [Methylocella silvestris BL2] Length = 258 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 92/309 (29%), Gaps = 82/309 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N + +RT L +Y K D++ LQE V + Sbjct: 1 MQIATWNVN------------SVRQRTG----HLLRYLKEQAPDVLCLQE---LKCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ +A+ K +++ P + R Sbjct: 42 FPWGE-------VEAAGYNAAVHGQKGFNGVAILSKAPIEVKRGLPGDPTDEH-----AR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201 +E ++ + V I+L + D+ + Y + W+ + Sbjct: 90 Y-IEAVIPHKQSVVRVASIYLPNGNPPDTEKYGYKLA-------------WMDRLIAHAR 135 Query: 202 -----LVPFVIAGDFN-------RKINYLGNNDDFWKTIDPN----------DSLIRFPK 239 P V+AGD+N D + +R Sbjct: 136 ELLRLEEPLVLAGDYNVIPAAADCADPAAWVGDALFLPQTRARFRTLLNLGLTDALRATT 195 Query: 240 EKDS-----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 ++ A RNK ID+ ++ A L+ + D + S Sbjct: 196 DEAGLYTFWDYQAGAWQRNKGIRIDHLLLSPGAADRLVTTTI-------DKGLRAEDKPS 248 Query: 294 DHCPISIDY 302 DH P+ I+ Sbjct: 249 DHVPVRIEL 257 >gi|70732721|ref|YP_262484.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68347020|gb|AAY94626.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 358 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 98/327 (29%), Gaps = 42/327 (12%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYT 55 K LA+ Q +++++WN+ L+ + V + Sbjct: 33 KESLAVNCSAQAAPLVPGQALKVMTWNLQYLAGKRYVFWNDQAQGEDEQPTLEDMAFSLD 92 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVA------KVFPKNTWCIFYSTERL-------INHS 102 + + ++ D+V LQE+ + + K+ + ++ + + + Sbjct: 93 EVARVIRDEQPDLVLLQEVDNGAKASAYQDQLKLLQERLTDLYPCSTQAYDWKADFVPSP 152 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVL 160 + A R + + P + R A+ L +G ++ VL Sbjct: 153 HIFGSVGRQLATLSRYRIDHAERLQLPTAEHGFIGRQFQPREALLLSYLPLNDGGQVAVL 212 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RKIN-YL 218 + HL+ S+Q + + + + P++I GDFN + Y Sbjct: 213 NTHLE----------RARTPGQTQSRQVAAIGKVLDKLEGRGTPWLIGGDFNLLPLGQYQ 262 Query: 219 GNNDDFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 +D + L P + + P D + + + Sbjct: 263 RLSDVQRAPYSADSPLHLLWDKYPMIPSNTQASGVDRAHWLTHYPNDPSLDGPDRTVDYL 322 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 S + R+SDH P+ Sbjct: 323 FYSPRLKRVESRVRQDDTLRISDHLPV 349 >gi|319794897|ref|YP_004156537.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315597360|gb|ADU38426.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 346 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 70/233 (30%), Gaps = 45/233 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 + + + N+ L+ ++N +Y + + L+AD++ +QE+ Sbjct: 10 TLFVATCNLLNLA-NPNRVYYENQDAYNEREYERKIDWIGERFHALNADVLAVQEVWDEA 68 Query: 79 AVAKVFPKN--TWCIFYSTERLINHSKRDSNNDI---------HTAIAVRKKNVRVLQ-- 125 A+ ++ + IA R + V Sbjct: 69 ALKAAIARSGLRYDFVSVPGAENTPPPGSPPGTPPRAGAQGTPRVGIATRLQVDNVQSFV 128 Query: 126 -------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-------CFLD 171 P LG F R + + +G+++ VL +HLKS + Sbjct: 129 DFPPAFGVDVPGLGPHTRFERPPLLATLRMK---HGQQVHVLTVHLKSKRPKFLQDAQGN 185 Query: 172 SLENTYSP------SCSLLSQQAQWLKDW----ITQKKESLVPFVIAGDFNRK 214 LE+ S L + I + + P V+ GDFN Sbjct: 186 HLEDRDDRKVGVMASLRSLLMRGAEAAALRCIVIDLLQGTNTPLVVMGDFNDN 238 >gi|157151208|ref|YP_001450928.1| LPXTG cell wall surface protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076002|gb|ABV10685.1| LPXTG cell wall surface protein, nuclease/phosphatase domain [Streptococcus gordonii str. Challis substr. CH1] Length = 779 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 102/334 (30%), Gaps = 59/334 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFL 71 + K+ + S+NI S + T + N DI+ L Sbjct: 346 ISPLYPSEDKLTIASYNIENFSANTQKGETPDEK------VTKIANSFINEIHSPDIITL 399 Query: 72 QEMGS----------------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 E+ A++ + + L ++I A Sbjct: 400 IEVQDDNGSVNDGTTSGVKSGEKLAARIKELGGKNYK-YTEVAPLDGQDGGKPGSNIRVA 458 Query: 114 IAVRKKNVRVLQQS-----------------YPLLGAKDSFSRAGNRRAVELLVEINGKK 156 V+++++ P + + R+++ E G+ Sbjct: 459 FLYNPDRVKLVEKEAGTSDKAASFSGGHLLKNPARIDPTNPAFTKVRKSLVAEFEFKGQH 518 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLS----QQAQWLKDWITQ--KKESLVPFVIAGD 210 + V+ HLKS D++ + P+ ++A+ L +++ + ++ + FV+ GD Sbjct: 519 VVVIANHLKSKLGDDAVYGSNQPAIQHTQAARIEEAKILNNFVQEGLRQNPNLKFVLTGD 578 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + K I N+ + + + + + +D + +N Sbjct: 579 FN-----DFEFSETAKAIAGNELINLMQEHDAADRYSYFYRGSNQSLDNIFISKNLAGKA 633 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 I R SDH P+ + DF Sbjct: 634 IFAPVHI----NASFMEEHGRASDHDPVVVQLDF 663 >gi|66047531|ref|YP_237372.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63258238|gb|AAY39334.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 380 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 101/320 (31%), Gaps = 58/320 (18%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYDLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + VA ++P +T ++ E + N S ++ Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGSVGRKLVTLS- 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L Sbjct: 188 RFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT--------- 238 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGNN 221 T + +Q + + + + P++I GDFN +++ Y ++ Sbjct: 239 -TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEQQRLGYAADS 297 Query: 222 D--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + W D P +S P D + + + S S Sbjct: 298 ELHQLW------DKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTVDYLFYSPSLKR 351 Query: 280 YNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 352 VSARVRRDDTLLISDHLPVI 371 >gi|302525892|ref|ZP_07278234.1| exodeoxyribonuclease III [Streptomyces sp. AA4] gi|302434787|gb|EFL06603.1| exodeoxyribonuclease III [Streptomyces sp. AA4] Length = 265 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 86/300 (28%), Gaps = 58/300 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR+ +WN+N + V R L N D++ LQE + Sbjct: 2 TVRVATWNVN------------SIVPRLPRVLDWL----DNTAPDVLCLQE---LKNTTE 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + +A+ K L G +A Sbjct: 43 AFPADEIV-------ARGYEVAAYGLGRWNGVAILSKIGLDDVVRG-LPGEPGFDGKAEA 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + I V +++ + + Y + + L D + ++ Sbjct: 95 RA-----IGATCGGIRVWSVYVPNGREPQNPHYAYK------LEWFEKLSDLVGEELRHA 143 Query: 203 VPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 PF + GDFN + + + R +K + + D+ Sbjct: 144 RPFAVLGDFN--VAPTDEDVWDISVFAESTHVTEPERAALKKLRDAGLSDVFPRPLKYDH 201 Query: 260 FVM--DQNAYKFLIQESFS-EILYNEDDIKS------------RGKRLSDHCPISIDYDF 304 D A F + +++Y + +GK SDH PI +D + Sbjct: 202 PFTYWDYRAGNFPNNKGMRIDLVYGNEVFAKAVTDSYVDREARKGKGPSDHAPIVVDLEL 261 >gi|172039538|ref|YP_001806039.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142] gi|171700992|gb|ACB53973.1| hypothetical protein cce_4625 [Cyanothece sp. ATCC 51142] Length = 1252 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 98/326 (30%), Gaps = 54/326 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNLD-ADIVFLQEMGS----- 76 + + ++N+ L + + R + + Q NL+ DI+ LQE+ Sbjct: 803 LTIATYNVLNLDPNDNDGDTDVADGR----FDTIAQQIINNLNSPDIIGLQEIQDNSGSV 858 Query: 77 -------YNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + ++ + +T N S +I TA V V Sbjct: 859 DDGTVSADQTLQRLVDAIVDAGGPQYEFIDNTFITNNQSGGQPGGNIRTAYLYDPNQVSV 918 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFLDSLEN 175 P+ G R + + E G+ + V++ H S D Sbjct: 919 ASVQ-PIGSQVSGEPFNGARLPLAVDFEFQGEIVTVINNHFSSKGGSAPIFGVEQDFAAR 977 Query: 176 TY----SPSCSLLSQQAQWLKDWITQKKES--LVPFVIAGDFNR----------KINYLG 219 + S + +QAQ + D++ + V+ GD N + Sbjct: 978 QEDITVNGSLNERREQAQAVNDFVDGVLSNDPNGNVVVLGDLNEFEFVSPLPILEGTLES 1037 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEI 278 N+ + L + + N +D+ ++ + L + +I Sbjct: 1038 TNNGQETITGGDAVLSNLVNNIAEDERYSFIFQGNSQQLDHILVSDS----LFNNAEIDI 1093 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + SDH P+ + F Sbjct: 1094 VNINSEFAATESLASDHDPVLASFTF 1119 >gi|323976824|gb|EGB71912.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TW10509] Length = 253 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSIDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPILVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|227821924|ref|YP_002825894.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] gi|227340923|gb|ACP25141.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] Length = 319 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 98/309 (31%), Gaps = 73/309 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ +WNIN R L + K + DI LQE+ S + Sbjct: 58 RPMKIATWNIN------------GVKAR----LDGLVAWLKASNPDIACLQEIKSVDDA- 100 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ + + +A + L+ G S Sbjct: 101 --FPR-------EEIEALGYHIETHGQKGFNGVA----LLSKLRPDEVNRGLPGDDSDEQ 147 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R +E + + G + V ++L + + + + Y Q L + ++ Sbjct: 148 SRF-IEGVFSVAGGAVRVCCLYLPNGNPVGTEKYPYKLG----WMQR--LASFAKERLLL 200 Query: 202 LVPFVIAGDFN--------------RKIN-YLGNNDDFWKTIDPN--DSLIRFPKEK--- 241 P ++AGD+N R +L ++ + +R ++ Sbjct: 201 EEPLILAGDYNVIPEAHDCWDVNVWRNDALFLPETRAAFRQLRNLGLTDAVRATTDEVPL 260 Query: 242 ------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + C I ID+ ++ A L+ S + + ++ SDH Sbjct: 261 YSFWDYQAGCW---QKNFGIRIDHLMLSPEAVDKLVSTSIEKHV-------RAWEKPSDH 310 Query: 296 CPISIDYDF 304 P++ + F Sbjct: 311 VPVAAQFAF 319 >gi|213966791|ref|ZP_03394942.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|213928641|gb|EEB62185.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 365 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 101/338 (29%), Gaps = 65/338 (19%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 35 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 95 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 155 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 214 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---- 212 + V++ HL + D + +Q ++ + + + P++I GDFN Sbjct: 215 LAVINTHLATAKPGDGTAH----------EQIAATENLLDKLEGGGTPWLIGGDFNLLPL 264 Query: 213 -----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 W+ P +S P D + Sbjct: 265 GQYQRLPEQQRHGYAADSELHALWEK------YPMIPNNTESSGTDRSQWLTHFPNDSRI 318 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + S S + + +SDH P+ Sbjct: 319 NGPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 356 >gi|294627485|ref|ZP_06706068.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598116|gb|EFF42270.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 572 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 98/344 (28%), Gaps = 70/344 (20%) Query: 8 ALVFFLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYT----L 56 L +P + +R+ S+N+ G + + RT + Sbjct: 252 VLGPLTLPAMPTAVAPQVGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQLTK 311 Query: 57 LRQYAKNLDADIVFLQEMGS-----YNAVAKVFP-------KNTWCIFYSTERLINHSKR 104 L L AD+ L E+ + AV+++ W + Sbjct: 312 LVATIVPLGADVAALMEVENDGNAADAAVSQLVAALNAAGKDKDWQFVDTGSGPG----- 366 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI-H 163 ++ I I R + +V P + F +R + +V+ H Sbjct: 367 --DDAIRVGILYR--SSQVTPVGKPAMLTGGPFEN-HSRVPLAQAFRSARGATFVVVANH 421 Query: 164 LKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFN--- 212 KS C S + +C + ++ A+ L W+ V+ GDFN Sbjct: 422 FKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGDFNAYA 481 Query: 213 -----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 R + G D + R +D+ ++ Sbjct: 482 MEMPMRSLRASGWQDA-FAVAGVKQPYSYVYDGLSGR------------LDHALLSPAMA 528 Query: 268 KFLIQESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 K L + I + D K R SDH P+ + + Sbjct: 529 KQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|82753368|ref|XP_727650.1| sphingomyelin/lysocholinephospholipid-phospholipase C [Plasmodium yoelii yoelii str. 17XNL] gi|23483595|gb|EAA19215.1| sphingomyelin/lysocholinephospholipid-phospholipase C-related [Plasmodium yoelii yoelii] Length = 504 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 41/192 (21%) Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI-----TQ 197 + A+ L + I ++ HL + C +Q + L W+ ++ Sbjct: 310 KGAIYLKFNVKNNVIHLVATHLHAG------NTKSDEKCR--RKQIEELTKWVYNGVPSK 361 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN------- 250 ++ P GDFN + +++F+K I + L + + Sbjct: 362 FIKNSEPLFFVGDFNIR---YIKDENFFKEITSSKYLNCTVTNNTLETTYDSSINDYCRY 418 Query: 251 ------LRNKIPIDYFVMDQNAY-KFLIQESFSEILYNEDDIKSR-----------GKRL 292 + +DY ++ +N+ K ++ ++ + Y I Sbjct: 419 IEDDFEHKYVDTLDYILVSKNSNIKTIVPQTAVQHGYKPISIFKTILCCIPYQSINIHHA 478 Query: 293 SDHCPISIDYDF 304 SDH PI + F Sbjct: 479 SDHFPIYATFKF 490 >gi|223982521|ref|ZP_03632759.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM 12042] gi|223965496|gb|EEF69770.1| hypothetical protein HOLDEFILI_00033 [Holdemania filiformis DSM 12042] Length = 1904 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 99/303 (32%), Gaps = 68/303 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 L + +R+ +WNI + K+ D + + +++ +Q Sbjct: 26 LFAQSPEAPVTLRVGTWNI---------AANKHP------DLAAMSNVIAENNIEVLAVQ 70 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-----NVRVLQQS 127 E+ +F + + + S +HT A + Sbjct: 71 EVD---------------MFNNRNNIDMMAGLTSTKLVHTDFAKFRDYEGGEFGIGFVSQ 115 Query: 128 YPLL----GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 YP+L +++ + A ++VE +GK+I + ++HL + + + Sbjct: 116 YPILKSSASPLETYELEATKVAQRIVVEKDGKQIALYNVHLSA-------QTPKQMTARE 168 Query: 184 LSQ-QAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L Q Q L + I V + VI GDFN D + Sbjct: 169 LRQVQMAQLAEQI---ANDPVEYKVIMGDFN-------------TDQDTYEFSRLLDYFN 212 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + + ++ LR P D D F + + D+IK +LSDH ++ D Sbjct: 213 MANGHDDQWLRTYWPDD----DPAMKVFAVDNILATKNIEIDNIKVVNNKLSDHYMLTAD 268 Query: 302 YDF 304 Sbjct: 269 LTL 271 >gi|113868345|ref|YP_726834.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113527121|emb|CAJ93466.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 284 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 96/317 (30%), Gaps = 69/317 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + L+SWNI +G V LR A DAD++ LQE+ + Sbjct: 1 MELISWNIQWGRGADGHVDLGRQV-------DTLRGIA---DADVICLQEVTRGFGELRG 50 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA--------KD 135 P + H D TA RK+ ++ P+ D Sbjct: 51 SPGEDQVTELTALLPGYHLLYAPGVDRRTATGGRKQFGNLIATRLPVREVFRHALPWPAD 110 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R A+E VE++ +++ V+ HL + + + QA+ L+ W Sbjct: 111 PQVASMPRVALEASVEVSTRRLRVICTHL------EYYSSHQRAA------QAEALRTWH 158 Query: 196 TQKKESLV----------PF---------VIAGDFNRK---INYLGNNDDFWKTIDPNDS 233 + + PF V+ GDFN K I Y + F P Sbjct: 159 AEACDHARRPGRSEKWPGPFTPEPRPAEAVLCGDFNSKPDDIAYRRVLEPFDDATPPWRD 218 Query: 234 LIRFPK---EKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 C + P D+ + +N + + + Sbjct: 219 AWLHTHPGQPHAPTCALYDKEQWPEPPFACDFMFVTENLAGRIRRCEVDADTAS------ 272 Query: 288 RGKRLSDHCPISIDYDF 304 SDH PI + D Sbjct: 273 -----SDHQPILLSLDL 284 >gi|71018595|ref|XP_759528.1| hypothetical protein UM03381.1 [Ustilago maydis 521] gi|46099016|gb|EAK84249.1| hypothetical protein UM03381.1 [Ustilago maydis 521] Length = 300 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 34/257 (13%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D D++ +QE +N A ++ + R + ++T + K+ Sbjct: 62 FAQYDYDLINVQE--DFNYHAYIYDNDD-----HPYRTPTSGGVPFGSGLNTLSTIPFKD 114 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ L D + G V + G ++ + ++H+ + + S Sbjct: 115 LSRVKWEKCNLNEGDCLTPKG--YTVVTVTLPTGGELDLYNLHMDAG------SDDGDSS 166 Query: 181 CSLLSQQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDF------------WKT 227 + + + I + ++ ++ GD N + Y D+ W Sbjct: 167 ARTSN--FEQVARAIASRSDAAGRAVIVMGDTNSR--YTRPKDNLLSFLSKTGLVDTWVE 222 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + N +D + L ++ + + Sbjct: 223 LVRGGKPPASTDAALLCADPIPTSNNCEVVDKVFYKNGSKVTLKPSTWQ--YLATEFTDA 280 Query: 288 RGKRLSDHCPISIDYDF 304 G L+DH PIS+ + + Sbjct: 281 TGNPLADHTPISVQFTY 297 >gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 257 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 101/295 (34%), Gaps = 54/295 (18%) Query: 23 KVRLVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +VRLV++NI L+ +G++ + ++ ++ + + L D+V LQE+ + Sbjct: 3 RVRLVTFNIAHGRGLAPIQGLT----TPQKLKANLRKIARLIGELKPDVVALQEVDERSL 58 Query: 80 VAKVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAK 134 A F + ++ H++R ++ A+ R + Sbjct: 59 WAGNFDHLEYLRLHAGFEHAVFGIHNRRAGLLNLSYGNALLSRYPISYSETVVFGQR--- 115 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R G + + +++ G+ + ++++HL S E+ Q L W Sbjct: 116 ----RVGEKGFLFAEIDVAGRVMPLVNVHL----HFSSREHRIR--------QIGRLLAW 159 Query: 195 ITQKKES-----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + +K+E VP ++ GD N + + P R + Sbjct: 160 LREKQEHSRGRWRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHP--TKGRTFPSP 217 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ + N + LSDH P+++D+ Sbjct: 218 LPGR--LLDFVFLPGAC--------------NASHCEIVRCFLSDHRPVAVDFTL 256 >gi|157146576|ref|YP_001453895.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895] gi|157083781|gb|ABV13459.1| hypothetical protein CKO_02337 [Citrobacter koseri ATCC BAA-895] Length = 253 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 87/259 (33%), Gaps = 49/259 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + ++ + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVGGSEK-------RGVLYCRIVPPMLAQPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L + + Q L +W+ P V+AGDFN D K Sbjct: 144 -----GLREGHRQA------QLDMLVEWVNAL-PESEPVVVAGDFN---------DWRQK 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 P S + + ++PI +D+ K S + + Sbjct: 183 ANYPLKASAGLEEIFTRAHGRPARTFPVRLPI--LRLDRIYVKNANASSPAALP------ 234 Query: 286 KSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 LRNWRHLSDHAPLSAEIHL 253 >gi|192291575|ref|YP_001992180.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192285324|gb|ACF01705.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 263 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 104/305 (34%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + ++ D+V LQE+ V + Sbjct: 1 MRIATWNVN------------SVRQR----LDHLVSWLQDCQPDVVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K L+++ P L +S A R Sbjct: 42 FPR-------EPIEALGYNVVTHGQKTFNGVALLSKYP--LEEANPGLAGDESDVHA--R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + + S + Y S L+D+ Q+ ++ Sbjct: 91 F-LEGVVSLKHGVVRVACLYLPNGNPVGSEKYPYKLS------WMARLRDYAQQRLKTEE 143 Query: 204 PFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN D ++ +R + + Sbjct: 144 PLILAGDFNVIPQAEDVHNPAAWTE-DALFRPETRESFQTLLGLGLTDALRATTDAPGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGI-------DSYVRNWEKPSDHVPVW 255 Query: 300 IDYDF 304 D+D Sbjct: 256 ADFDL 260 >gi|303258098|ref|ZP_07344106.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|330998688|ref|ZP_08322417.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] gi|302859117|gb|EFL82200.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|329576427|gb|EGG57939.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] Length = 265 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 105/317 (33%), Gaps = 88/317 (27%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + +WN+N+L ++ L D+ + I+ LQE+ A Sbjct: 2 SITITTWNVNSLKVRQPQVL----------DFLK------ETENSILCLQELKMQEA--- 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 I S + I ++ + +A +L+ L ++ + G Sbjct: 43 -------DIDASAFKEIGYTLDAFGQKTYNGVA------TILRDPLTFLPDEEVRNIPGF 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--------AQWLKDW 194 + +L ++ C + N Y P+ + + + L +W Sbjct: 90 ----------EDPQSRLLAATVRVGCERLRVINGYFPNGETVESEKFPYKLSWLEALAEW 139 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC--------- 245 + + E V+ GDFN + D W +S++ PK +++ Sbjct: 140 LPSQLEQYPNLVLLGDFN----IAPEDRDVWDPESWAESVLCTPKAREAFQRLIDLGLTD 195 Query: 246 ------NANKNL-----------RNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 K+ RN+ ID+ ++ K L+ ++ ++ + Sbjct: 196 SFRAFEQPEKSYSWWDYRMMAFRRNRGLRIDHILIS----KALVSKNLGVEIHKK---VR 248 Query: 288 RGKRLSDHCPISIDYDF 304 +R SDH P+++ D Sbjct: 249 GNERPSDHAPVTLTLDL 265 >gi|241766052|ref|ZP_04763968.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241363933|gb|EER59221.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 249 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 33/195 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI +GV + + L + LDADIV LQE+ KV Sbjct: 11 LRVATYNI-----HKGVQGIGPAR---RLEIHNLGLAVEQLDADIVCLQEV------RKV 56 Query: 84 FP-KNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVLQQSYPLLGAKD---SF 137 + + + + + ++ A ++ L +P++G + S Sbjct: 57 HRREAAYFERWPDVPQAEYLAPEGYEAVYRTNAFTRHGEHGNALLSRWPVIGHQHEDISD 116 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R R + + ++ +G+++ V+ +HL S +Q + L+ +I + Sbjct: 117 HRFEQRGLLHVELDAHGRRVHVIVVHL--GLIPGSRV-----------RQVERLQQFIER 163 Query: 198 KKESLVPFVIAGDFN 212 + + P V+AGDFN Sbjct: 164 EVPTGSPVVVAGDFN 178 >gi|218532583|ref|YP_002423399.1| endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] gi|218524886|gb|ACK85471.1| Endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] Length = 328 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 95/298 (31%), Gaps = 67/298 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ ++++RL+++N+ +G + + +L DIV LQE+ Sbjct: 74 PASAASRRLRLLTYNVRHCRGTDGRVAP-----------ERVARVIADLAPDIVALQEVD 122 Query: 75 ---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A++ +S H + + AV L+ Sbjct: 123 VGRPRTDGLDQAEEIARLVG------MFSHFHPALHIEEE-----RYGDAVLTHLPSRLK 171 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 ++ PL G R A+ + V K+ V+ H L + Sbjct: 172 RAGPLPGLLRRPGLEP-RGALWVEVTAGASKLQVITTHF-------GLLGAERVA----- 218 Query: 186 QQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 QA+ L DW+ P V+ GDFN G + + + R E+ Sbjct: 219 -QAKALLGPDWLGD-PACHAPTVLLGDFN----ATGWSRAYRRLSGRLTDARRLTGERRW 272 Query: 244 RCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 R ++ P +D+ + + I D +R SDH P+ Sbjct: 273 R-RGGATFPSRFPLLRVDHVFVSERVAVERIA--------VVDTPLARKA--SDHLPV 319 >gi|332828522|gb|EGK01222.1| hypothetical protein HMPREF9455_02414 [Dysgonomonas gadei ATCC BAA-286] Length = 263 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 78/260 (30%), Gaps = 49/260 (18%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN-----HSKRDS 106 + ++ K + DIV LQE+ N + P F S + + Sbjct: 43 ASLEEFAEFIKKENPDIVALQEVD-VNTLRTRAPHQNGKNFISELAFRTGMLSLYGRTID 101 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + I + K Q L + + R ++ GK I HL Sbjct: 102 YAGGYYGIGILSKYPISQSQRIFLPMPEGAKERRALLTG--VVELSEGKSITFACTHL-- 157 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + + Q ++ Q + P ++ GDFN + ++D+ Sbjct: 158 ----DYTTSAVRRA------QVDFINQ---QLMKIETPVILCGDFNAR----PDSDEIAN 200 Query: 227 TIDP--NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + S + F S K IDY + + +S++ + Sbjct: 201 GMKNWMQVSTMDFTIPAKSP---------KSKIDYIFCYPASNVWKTVDSYTPVT----- 246 Query: 285 IKSRGKRLSDHCPISIDYDF 304 +LSDH PI Sbjct: 247 ------QLSDHLPIITTLTL 260 >gi|319899949|ref|YP_004159677.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319414980|gb|ADV42091.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 287 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 100/326 (30%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPCTAS-----VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M R +L L + C S V ++S+NI + ++ ++ W+ R T Sbjct: 1 MKRIILLLLPLWAASCGQSKKPVSAPDPVNVMSFNIRYDNPEDSLNNWRYRKDRVA---T 57 Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 +R Y D D++ QE+ + + P + + ++A Sbjct: 58 AIRFY----DTDLLGTQEVLHNQLKDLQECLP--EYGVVGVGREDGKEKGE------YSA 105 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 + +K +L P + + A R A ++ +GK+ + L+ HL Sbjct: 106 LWYKKDRFVLLDSGNFWLSETPGVAGSKGWDGACERIASWAKLKDKVSGKEYFALNTHL- 164 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S L+ + L + +P ++ GDFN +D Sbjct: 165 ----DHVGVVARSEGIRLILDRVDELS--------NGLPVIVTGDFN----ADPESDVIK 208 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESF 275 DP + +S + IDY + + Sbjct: 209 HVTDPANPRHLTDARMESPVVYGPAWTFHDFGKIPYDQRPLIDYVFV---------RNGL 259 Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301 + Y LSDH P+ + Sbjct: 260 KVLRYGVLAETEGNAFLSDHSPVLVT 285 >gi|294674945|ref|YP_003575561.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472469|gb|ADE81858.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 364 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 99/324 (30%), Gaps = 73/324 (22%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + L L ++L+S+N+ + + + +Y DA Sbjct: 84 ITLYMPLHISQTPPEGTIKLISYNV----------CQYGGNYKYEQGFEKVHEYLTEQDA 133 Query: 67 DIVFLQE-MGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV LQE + + K++P N IF + IN + + K Sbjct: 134 DIVCLQEDVDTWRRYVKQWYEKIYPYNDTTIFNPQDACIN------------GVGIHTKY 181 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLE 174 + ++ P + + + + ++ IN + HL K + Sbjct: 182 PIIRKERIPYESSGNGSVAYFLQVGNDTVLVINN---HLEGTHLSNEDRDKYKQMISGKM 238 Query: 175 NTYSPSCSLLSQ-------------QAQWLKDWITQKKESLVPFVIAGDFNRK-INYLGN 220 Y+ L +A+ + D+I + P ++ GDFN I+Y Sbjct: 239 KKYTAKAETLFLIEKLGKYAAKRAPEAEAVHDYIEAHR--HYPIIVCGDFNDNPISYSR- 295 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 +TI + K + N+ + ID+ ++ + Y Sbjct: 296 -----RTIAQGLTDCYQETGKGIGLSYNQKGFF-VRIDHILVSDHFE-----------PY 338 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 N SDH PI Sbjct: 339 NCHIDSKMDA--SDHNPIICTLKM 360 >gi|108757091|ref|YP_631342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108460971|gb|ABF86156.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 427 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 57/200 (28%), Gaps = 34/200 (17%) Query: 55 TLLRQYAKNLDA-----DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 L Y NL+A D++ LQE A V + + + N Sbjct: 88 QALLDYFDNLEARGRLPDVLGLQEANVPIA---VLLAERYGFHLAYQGHDGGPGARLMNG 144 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAK----------DSFSRAGNRRAVELLVEINGKKIWV 159 A R V +Y A+ D +R A+ + +E+ G + + Sbjct: 145 --KAFLTRHPLVDAAHFTYATPDAERDAAIMRRGGDPCEIPEDRGALYVRLEVEGHPVVL 202 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 ++H DS N + +Q L ++ V GDFN Sbjct: 203 YNVHHTLG---DSGINARN------LRQLNALLQ-----HREVMHAVALGDFNANTAIKS 248 Query: 220 NNDDFWKTIDPNDSLIRFPK 239 + D + Sbjct: 249 GGSWLMAHLRTYDDTDTVEE 268 >gi|333031148|ref|ZP_08459209.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741745|gb|EGJ72227.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 261 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 95/315 (30%), Gaps = 73/315 (23%) Query: 2 IRKYVLALVFFLVPCTA-SVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K + L LV C+ AQ +VR++++N+ + + Sbjct: 1 MKKIKIILSLLLVLCSGIVFAQDTIRVRVMTYNLRF---------------GELASMEEI 45 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIHTA 113 Q+ K+ + D V LQE+ S + ++ Y T + K + Sbjct: 46 AQHIKSFNPDFVALQEVDSKTYRKRTPHQHGVDFLGELAYHTGMFGIYGKTIDYASGYYG 105 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDS 172 I + K + + L ++ + R +E L E+ I HL + S Sbjct: 106 IGILSKYSYITTKKTMLPKTEERLEQ---RALLEGLFEVGNDTIVFASTHLDAMSDETRS 162 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTID 229 ++ C + S P ++ GDFN + ++ F T Sbjct: 163 IQFDKIKKC----------------LEASQYPVLLGGDFNTRSTSSLIKKMDNWFLGTDS 206 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P IDY +I + L Sbjct: 207 DFGIPSWKPI---------------AKIDYIFGYPQKGWEIISTQTIQSL---------- 241 Query: 290 KRLSDHCPISIDYDF 304 LSDH PI + + Sbjct: 242 --LSDHMPIITELIY 254 >gi|197265396|ref|ZP_03165470.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243651|gb|EDY26271.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 252 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + + + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVGGSEK-------RGVLYCRITPPMLNRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L ++ + Q L W+ ES P ++AGDFN D K Sbjct: 144 -----GLRESHRQA------QLTMLAGWVNALPES-EPVLVAGDFN---------DWRQK 182 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P ++ + + +P+ +D+ K S + + Sbjct: 183 AGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYVKNANASSPTALP------L 234 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 RNWRHLSDHAPLSAEIHL 252 >gi|71661273|ref|XP_817660.1| MP99 [Trypanosoma cruzi strain CL Brener] gi|70882865|gb|EAN95809.1| MP99, putative [Trypanosoma cruzi] Length = 913 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 41/215 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDA 66 ++P +R+V+WN+ + + R D Y L + + LDA Sbjct: 614 VLPTPTEELSTLRVVTWNVQFNRHSG----ERTPLGRDGIDWCTPTRYIALAKTMETLDA 669 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D++ +QE+ WC + ++ + N D H A+R V +L Sbjct: 670 DVISMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH---AIRPWGVMLLV 715 Query: 126 QSYPLLGAKDSFSRAGNRRAV----ELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + A E+ + ++ + + +HL + N + S Sbjct: 716 KRHLRVEGMHHANVAAFAGHTSVMPEVTITVSKNVPVTIGSLHLLA------PYNKNNVS 769 Query: 181 CSLLSQQAQWLKDWITQK-KESLVPF--VIAGDFN 212 Q + L + + VP ++ GDFN Sbjct: 770 NRT--TQLENLTKRMRARPSAGGVPTGAIVMGDFN 802 >gi|171915527|ref|ZP_02930997.1| probable secreted protein [Verrucomicrobium spinosum DSM 4136] Length = 275 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 81/252 (32%), Gaps = 42/252 (16%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNND 109 D+ L + L D+V LQE+ + V + + + + + Sbjct: 50 QYDHALQHRVIGALKPDLVALQEVDRRTSRVQGLDVPADFAKAQGMTFAYGAAMSFAGGE 109 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKS 166 TA R + P+ G + R A + V ++ ++ ++ +H S Sbjct: 110 YGTAALSRLPIASSRTIALPVKGGE-------PRAATLITVAVPTVSPAEVTLVSVHFDS 162 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D + A+ L I KE+ P ++AGDFN + Sbjct: 163 G--ADDAARREN---------ARVL---IAALKETTTPVILAGDFNDR-----PGSTTLT 203 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + P+ S A++ ++ ID+ ++ A L + E Sbjct: 204 LLAEAGFRRCVPEGDASSYPADEP---RLVIDHVLLRDGADVRLEDAGTKVVPNAEA--- 257 Query: 287 SRGKRLSDHCPI 298 SDH P+ Sbjct: 258 ------SDHRPL 263 >gi|319404431|emb|CBI78034.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498] Length = 260 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 100/305 (32%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R L ++ K D+V LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHE----TLCKWLKQNQPDVVCLQEIKSVD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++T + + +A+ L ++ P + Sbjct: 42 FPRDT-------IENLGYHIETHGQKSFNGVAI-------LSKTVPDEVILQLPGNNNDM 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLEN-TYSPSCSLLSQQAQWLKDWITQKKE 200 +A + + N I V ++L + ++S + L A+ L Sbjct: 88 QARYIETVYSTNTGSIRVASLYLPNGNPINSEKYLYKIEWMKRLYTHAKSL-------LA 140 Query: 201 SLVPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEKDS 243 P ++AGD+N ++ + ++ I IR + S Sbjct: 141 YEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPS 200 Query: 244 ----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 AN +N ID+ ++ A LI Y++ + + + SDH PI Sbjct: 201 FSFWDFQANAWKKNNGIRIDHLLLSPEAADQLI------CAYSQTEARGYQ-KPSDHVPI 253 Query: 299 SIDYD 303 I+ + Sbjct: 254 WIELN 258 >gi|319407432|emb|CBI81083.1| exodeoxyribonuclease III [Bartonella sp. 1-1C] Length = 260 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 100/305 (32%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R L ++ + DI LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHE----TLCKWLEQNQPDIACLQEIKSVD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++T + + +A+ L + P ++ Sbjct: 42 FPRDT-------IENLGYHIETHGQKSFNGVAI-------LSKKVPDEVILRLPGDNNDK 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLEN-TYSPSCSLLSQQAQWLKDWITQKKE 200 +A + + N I V ++L + ++S + L A+ L Sbjct: 88 QARYIETVYSTNIGSIRVASLYLPNGNPINSEKYLYKIEWMKRLYTHAKSL-------LA 140 Query: 201 SLVPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEKDS 243 P ++AGD+N ++ + ++ I IR + S Sbjct: 141 YEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCITHLGFYDAIRNVTDAPS 200 Query: 244 ----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 AN +N ID+ ++ A LI Y++ +++ + SDH PI Sbjct: 201 FSFWDFQANAWKKNNGIRIDHLLLSPEAADQLI------CAYSQTEVRGYQ-KPSDHVPI 253 Query: 299 SIDYD 303 I+ + Sbjct: 254 WIELN 258 >gi|254468067|ref|ZP_05081473.1| exodeoxyribonuclease III [beta proteobacterium KB13] gi|207086877|gb|EDZ64160.1| exodeoxyribonuclease III [beta proteobacterium KB13] Length = 256 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+N+L + + L + D++ LQE S Sbjct: 1 MKIISWNVNSLKIR----------------HNQLVDIINKHNPDVISLQETKSQ------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + L LL + R Sbjct: 39 ----DENFPIESFNNLGYQSIFTGQKTFNGVAI----ITKLPFENILLNIPNFQDEQK-R 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V V+ + +KI +++ + + LDS + Y S W+ + K Sbjct: 90 F-VSAEVKFDDRKIIIMNGYFPNGQSLDSDKFIYKQS---------WVNALLKFIKTKNS 139 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP------ 256 ++ GDFN + + +D W + R ++ CN R Sbjct: 140 DSLLMGDFNIAPDDIDCHDPEKWVGTVLTSDIERNLFKEIIECNFTDTHRYLNKNEPGFT 199 Query: 257 ----------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ + + FL ++ + +R SDH PI + Sbjct: 200 WWDYRMAAFRRNLGLRIDHILASHDLINFLKD-------FSVLSDYRKLERPSDHAPIML 252 Query: 301 DYDF 304 +F Sbjct: 253 TLNF 256 >gi|294139368|ref|YP_003555346.1| hypothetical protein SVI_0597 [Shewanella violacea DSS12] gi|293325837|dbj|BAJ00568.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 365 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 109/366 (29%), Gaps = 81/366 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADI 68 ++ + ++++ S+N+ + ++ T + + +Y D+ Sbjct: 1 MLSTHSDSHYQLKIASFNLFNFIAPPD-AFYEFDNIYTQEQWQKKLDWITKYLNEHQPDV 59 Query: 69 VFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + QE+ S ++ K + +C+ S + A+A R + + Sbjct: 60 IGFQEVFSPDELQSLTKSCGLDYFCVLDS----PQVMDDFIYSKPVVALASRYPIKQAVS 115 Query: 126 QSYPL-------LGAKDSFSRAGNRRAVEL---------LVEINGKKIWVLDIHLKSFCF 169 + L ++ FSR R VEL +V K+ K+ + Sbjct: 116 VNADPGWAAKMGLESEFEFSRKPLRATVELPKLGLCDCYVVHFKSKRTLFDVQQSKAGSY 175 Query: 170 LDSLENTYSPSCSLLSQ--QAQWLKDW-----------------ITQKKESLVPFVIAGD 210 S++ T S + + Q + L W + ++ ++ P ++ GD Sbjct: 176 TGSVKETSSAAELNIGQLLAVEALGQWGSSIQRGSEAALLRYAMVERRSQTQNPMILMGD 235 Query: 211 FNR-----KINYLGNNDD--------------------FWKTIDPNDSLIRFPKEKDSRC 245 FN + L + D + + L + + S Sbjct: 236 FNDILSDGVLAALTSVDTRIKPQTVIGQGAMGDVAHQLGFYRLQDAYDLYQASQYSLSEQ 295 Query: 246 NANKNLRN---KIPIDYFVMD---QNAYKFLIQESFSEILYNEDDI---KSRGKRLSDHC 296 +DY ++ + E Y+ I + +DH Sbjct: 296 ARPATHYFFAKGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHA 355 Query: 297 PISIDY 302 P+ I Sbjct: 356 PVMISL 361 >gi|223984603|ref|ZP_03634730.1| hypothetical protein HOLDEFILI_02026 [Holdemania filiformis DSM 12042] gi|223963450|gb|EEF67835.1| hypothetical protein HOLDEFILI_02026 [Holdemania filiformis DSM 12042] Length = 363 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 79/277 (28%), Gaps = 57/277 (20%) Query: 61 AKNLDADIVFLQEMG---------SYNAVAK--------VFPKNTWCIFYSTERLINHSK 103 + D +FLQE+ A+ + VF N + H Sbjct: 110 IQQSSPDFIFLQEVDVKSSRSYGVDQAAILRSAFSGYGSVFALNFHSPYLIVPPQEPHGS 169 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN--RRAVELLVEINGKKIWVLD 161 S + V + R + R R ++ NGK++ +++ Sbjct: 170 VQSGLLTLSNWHVDENVRRQFPVDGSFITKFTDLDRCFLISRLGLD-----NGKELVLIN 224 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG-DFNRKIN---- 216 +HL + D +QQ L + ++ +VIAG DFN I Sbjct: 225 VHLSA---YDQGGTIR-------AQQLALLNQ-VLIQEREQGNYVIAGGDFNHDIAGTLD 273 Query: 217 ----YLGNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 D + + + + ++ + C ++D Sbjct: 274 FFPSQQQVPDWIFAMNTADLAEGYHFVRADNADETATCRGADIPFEAGVTYQAIVDGFLV 333 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I + R SDH P+ + + Sbjct: 334 SDNLAATAENIQND--------YRYSDHNPVVLKFRM 362 >gi|323448661|gb|EGB04556.1| hypothetical protein AURANDRAFT_72478 [Aureococcus anophagefferens] Length = 1523 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 33/218 (15%) Query: 22 QKVRLVSWNI-NTLSE-QEGVSLWKNSVKRTTSD--YTLLRQYAKNLDADIVFLQEM--- 74 Q++ L+SWN+ + +E K R+ + LR + + L AD+V LQE+ Sbjct: 3 QQLHLISWNVAGWRTTLEEMTRTTKARKGRSPEEEHQAALRSWLERLRADVVCLQEVKLK 62 Query: 75 -GSYNAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A A++ W ++ +R N + T VR VL+ Sbjct: 63 RSDVEAQARLLGAAADDGSWETYWCCNDGKARGQRAGLNGVAT--LVRGGAFGVLRADAK 120 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 LG D + + ++ ++ + + + + Sbjct: 121 PLGDPDFDDEGRC-------LVTEHGGFVLFNV------YVPNAGGGARVAYKMAW--LR 165 Query: 190 WLKDWIT-QKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L+ + ++ + P ++AGD N +G ND W Sbjct: 166 ALRSAMDRERAATGKPAILAGDLN---AKMGPNDSHWT 200 >gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 788 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 51/315 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S K T+ + Y+ + DI+ +QEM N Sbjct: 489 GKLTVATYNIENFSANA---------KETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIA----- 115 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVQEIRGPKYE-YVEVAPQNNQDGGAPGANIRVGFFYNPSR 598 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V+ + L ++ P +++ R+ + G+ I V+ HL S + Sbjct: 599 VKLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFG 658 Query: 176 TYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 P ++ L QK++ P VI GD N + Sbjct: 659 KIQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMN----DFEFSKPLQALKA 714 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N + K++R + N +D+ ++ N + + + ++ +I Sbjct: 715 ENMQDMLETVSKENR-YTYIHDGNAQVLDHILVTNN----IAPHTVVDPVHLNSNIMKEH 769 Query: 290 KRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 770 GRVSDHDPVLAQIDL 784 >gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 788 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 51/315 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S K T+ + Y+ + DI+ +QEM N Sbjct: 489 GKLTVATYNIENFSANA---------KETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIA----- 115 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVQEIRGPKYE-YVEVAPQNNQDGGAPGANIRVGFFYNPSR 598 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V+ + L ++ P +++ R+ + G+ I V+ HL S + Sbjct: 599 VKLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFG 658 Query: 176 TYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 P ++ L QK++ P VI GD N + Sbjct: 659 KIQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMN----DFEFSKPLQALKA 714 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 N + K++R + N +D+ ++ N + + + ++ +I Sbjct: 715 ENMQDMLETVSKENR-YTYIHDGNAQVLDHILVTNN----IAPHTVVDPVHLNSNIMKEH 769 Query: 290 KRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 770 GRVSDHDPVLAQIDL 784 >gi|296444974|ref|ZP_06886936.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] gi|296257642|gb|EFH04707.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] Length = 325 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 95/290 (32%), Gaps = 58/290 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 + RLVS+N L L R ++LR + ADI+ LQE+ + Sbjct: 2 SAPFRLVSFNTENLDWSPAGEL------RFKRRLSVLRPLLAAVAADILCLQEVDAQRPT 55 Query: 79 --------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRVLQQSYP 129 A+ ++ + F D+ D+H AI R V Q + Sbjct: 56 PHAPRRFIALDRLVAGTAYEGF--ARATSRRPGTDAPADVHNLAILSRWPIVATRQLHHD 113 Query: 130 LLGAKDSFSRAGN-----------RRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ AG R A+ + +G ++ VL++HL++ + + Sbjct: 114 IVAPWRWTPPAGRGVAAPIEIVFDRPALYARIAPPHGPELHVLNLHLRAPRAVPLPGTSG 173 Query: 178 SPSCSLL---------SQQAQWLKD--WITQK--KESLVPFVIAGDFNRKINYLGNNDDF 224 + S + ++ Q L+ ++ + + GDFN ++D Sbjct: 174 ARSGPVFAEGQFLAAQKREGQALETRLFVDALFDDDKDASIAVCGDFN-----SESHDAP 228 Query: 225 WKTIDPND--------SLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQN 265 + + +L + + + +D+ ++ + Sbjct: 229 ARILRGAAEEDAEAPFALTALAERLAESARYSVIHAGRRTLLDHILVSRA 278 >gi|291221066|ref|XP_002730544.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 404 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 68/232 (29%) Query: 22 QKVRLVS---WNI--NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEM 74 ++ L + WNI N D + + ++++ DI+ QE+ Sbjct: 31 GEITLATYNIWNIMFNW-------------------DIRKYRIAEMIRDVNPDIIGFQEV 71 Query: 75 GSYNA------------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 S + + ++ P + W F + H K +V + Sbjct: 72 RSDSWSGSWQGRNQLTELQELLPYHKWKAFV----AVQHVKEYPGTVHGLGFSVEGLGLL 127 Query: 123 ----VLQQSYPLLGAKDSFSRAGNRRAVEL-LVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +L + L S NR + + ++ N + V +HL Sbjct: 128 SRHPILNTTTQHLTVTASSPDKNNRHVLHVNVLVPNIGAVHVAVVHL---------SYDR 178 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPF---VIAGDFNRKINYLGNNDDFWK 226 + C+ + + AQ+L+D F VI GDFN + + K Sbjct: 179 NQQCNNVLEIAQYLQD---------SHFPLSVIMGDFNIYQGFEQPLERLMK 221 >gi|302383396|ref|YP_003819219.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] gi|302194024|gb|ADL01596.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] Length = 245 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 84/269 (31%), Gaps = 62/269 (23%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNA------VAKVFPKNTWCIFYSTE--RLINHSKR 104 D + D DIV LQE+ A A+V + S + + Sbjct: 19 DVERIVGVIAEHDPDIVCLQELDVGRARTGGVDQARVIAD---RLAMSVRFHAAMTVEQE 75 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIH 163 + + I T R + + P + R A+ + VE + VL H Sbjct: 76 EYGDAILT----RCPERLIRVGALPTVKGIPGLEP---RGAIWIRVEKPGCPPLNVLTTH 128 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNR---KINYL 218 L QA L KDW+ + P ++AGDFN Y Sbjct: 129 L--GLVPREQR-----------LQAAALAGKDWMGHAECQG-PTILAGDFNATSITRPYQ 174 Query: 219 GNNDDFW---KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + I ++ FP + I ID+ + + ++ +F Sbjct: 175 TLTRHLADCQRQIGQKPTIKTFPSGFPA-----------IRIDHVFVSPHIRVTGVRAAF 223 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 S + SDH P+ +D++F Sbjct: 224 S----------PLARMASDHLPLIVDFEF 242 >gi|290963099|ref|YP_003494281.1| hypothetical protein SCAB_88221 [Streptomyces scabiei 87.22] gi|260652625|emb|CBG75758.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 332 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 98/334 (29%), Gaps = 57/334 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN---- 78 ++R+ ++N+ E + R L++ L ADI QE+ Sbjct: 3 QIRIATFNLENFDE-PAPEDPPSLADR----IALMKPQITRLRADIACFQEVHGQERPGQ 57 Query: 79 -----AVAKVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAV------RKKNV---- 121 A+ ++ ST+ + N I T + V + V Sbjct: 58 PRDLLALKELLAGTNLDGASLTSTKPADDAVFDLRNLVIATHLPVIKHQQLKNDLVKEPR 117 Query: 122 --RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF------------ 167 R+ R +++ G+ + ++ +HLKS Sbjct: 118 YQRLTANPADAAPVTIGIERPILHAQIDVDHGAPGRLLHIITVHLKSKLPSNIPGQLGGK 177 Query: 168 -----CFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRK------ 214 D S QA ++ + Q + V+AGDFN + Sbjct: 178 HGDVWLSADGWAEGSFLSSMKRMSQALEVRRLVDQILHDDPDARIVVAGDFNAEPEEVPV 237 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQE 273 + GN +D L+ + + ID+ ++ +N Sbjct: 238 LAICGNVEDTNNGELATRVLVPIEHTIPNEARYTLFHHGRGQMIDHMLVTRNLLAHYRGS 297 Query: 274 SFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304 + ++D I SDH P+ +DF Sbjct: 298 EIHNEILHDDSIAFATDVKYPESDHAPVVATFDF 331 >gi|260777949|ref|ZP_05886842.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC BAA-450] gi|260605962|gb|EEX32247.1| hypothetical protein VIC_003346 [Vibrio coralliilyticus ATCC BAA-450] Length = 315 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 95/279 (34%), Gaps = 47/279 (16%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 NL+ADI+ +QE+ S +A ++F + + F S + N + A+A + Sbjct: 47 ILNLNADIIGVQEVFSLDAARQLFEELGYSYFASVD-SPNIESDYIYSHPVVALASKYPI 105 Query: 121 VRVLQQSYP--LLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTY 177 V + P L +R+ V +VE + ++ V HLKS Sbjct: 106 SHVEAVTLPASSLAGYSIPQPEFSRQPVFAVVEVPDIGEVAVYVSHLKS----------Q 155 Query: 178 SPSCSLLSQQAQWL-KDWITQKKE-----------------SLVPFVIAGDFNRKINYLG 219 + ++ + Q L W++ ++ +P V+ GD N+ I+ Sbjct: 156 RATEAIEEGEGQPLVGQWLSSQQRGWEAVMLRLAMEQQYAKHPIPTVLVGDMNQPISSDI 215 Query: 220 NNDDFWKTIDPNDSLIR------FPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLI 271 K I+ L+ F ++ + +DY + Q Sbjct: 216 TG-LLTKVIEGESFLMLRDSWDIFVIKQPGAERPPTHYHFAKGNVLDYILFSQEFQPDSQ 274 Query: 272 QESFSEILYNEDD------IKSRGKRLSDHCPISIDYDF 304 Y+ D R K+ SDH +S+ F Sbjct: 275 YSMADVTSYSTLDNHLINPSFERDKQASDHAFVSVTVRF 313 >gi|254295374|ref|YP_003061397.1| endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] gi|254043905|gb|ACT60700.1| Endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] Length = 315 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 80/290 (27%), Gaps = 49/290 (16%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSN 107 + D TL Q ADI LQE+ + + N + + + Sbjct: 38 SEDDRTLTAQALSASQADICCLQEVENLVTLTAF--HNRYLRRWLKKGYFYRALVEGNDQ 95 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--------NRRAVELLVEINGKKIWV 159 I + R K +R L + + G R +E+ VE GK + + Sbjct: 96 RGIDVGVLSRVKIIRKLSHADKTYADLNIKPPLGCHENDRIFRRDCLEIEVEKEGKSLTL 155 Query: 160 LDIHLKS----FCFLDSLENTYSPSCSLLSQQA---QWLKDWITQKKESLVPFVIAGDFN 212 H KS + + + +L +Q ++WI GDFN Sbjct: 156 FVCHFKSMHGGRTETKPVREAEAKAVRILIEQRFADPEAENWIA-----------LGDFN 204 Query: 213 RKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265 G D + + I + +D+ M + Sbjct: 205 DYFELDGATLFDHGLGPLIRDGFAIDAGVTLEKSPLNRWTHYYSHGDVYGALDHIFMSPS 264 Query: 266 AYKFLIQESFSEILYNEDDIKSR------------GKRLSDHCPISIDYD 303 + + +R + SDHCP+S+ Sbjct: 265 LAARNQDARLRIVRAGQPLRANRYKGHRFGGVGWMRPKSSDHCPLSVTLS 314 >gi|156398432|ref|XP_001638192.1| predicted protein [Nematostella vectensis] gi|156225311|gb|EDO46129.1| predicted protein [Nematostella vectensis] Length = 506 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 98/329 (29%), Gaps = 78/329 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++WNIN L +V R L+ + +L+AD++ QE + Sbjct: 1 MKILTWNINGLR----------AVTREK----KLKDFLNSLEADVMCFQET---KITRDM 43 Query: 84 FPK-----NTWCIFYS-TERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLG---- 132 + + + F+S + +S + D T +A + L S P +G Sbjct: 44 LEEATCMADGYTAFFSFSRVKSGYSGVATFCKDSTTPLAAEEGLTSQLSAS-PDIGFYGD 102 Query: 133 ----AKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D SR + L +G + +++++ C +EN Sbjct: 103 DEEFTSDQLSRLDSEGRTILTEHTLSSGGTVVIINVY----CPRADMENEDRI---QFKL 155 Query: 187 QA-QWLKDWITQKKESLVPFVIAGDFN--RK------------INYLGNNDDFWKTIDPN 231 + + L + S ++ GD N K + + + Sbjct: 156 EFHRLLSKRVKALLNSGKHVIVLGDINAAHKPIDHCNPCKYEDFSSFPGRAWL-DELLVS 214 Query: 232 DSLIRFPKEKDSRCNANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYNE-------- 282 L + +C + + + + + + + + Y Sbjct: 215 LPLPDNSCDSSWKCVSGLLIDSFRYF--HPLQREAYTNWSTSTGARQTNYGTRIDYILVD 272 Query: 283 ---------DDIKSRGKRLSDHCPISIDY 302 D + SDHCP+ Sbjct: 273 PPLLQQEFVDCVIRPEVEGSDHCPVVCTL 301 >gi|148554721|ref|YP_001262303.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] gi|148499911|gb|ABQ68165.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] Length = 363 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 96/309 (31%), Gaps = 55/309 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-----DADIVFLQEMGSYN 78 + ++++NI L + +T + + L IV LQE + Sbjct: 51 LSVMTYNIE--------GLPWPVRLGREAAFTKIGARLEALRLLGEQPHIVVLQEAFTDQ 102 Query: 79 AVAKVFPKNTWC--------------IFYSTERLINH-----SKRDSNNDIHTAIAVRKK 119 A ++ + + I +R S S + + + + Sbjct: 103 A-KRIGVEGGYRYIVNGPDRSLAGAAITTEADRAFQRDASFFSGERSGKVVDSGLQILSD 161 Query: 120 --NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + V + ++P D + G A+ + V G+ I V+D+HL S + Sbjct: 162 YPILSVRRMAFPTCAGFDCLANKGAVLAM-IAVPGLGEPIAVVDVHLNSR---RASHVAD 217 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPND 232 S +Q L ++ + P ++AGDFN + Y + W P Sbjct: 218 DRSLYAYRRQIDALDQFLAANVKPGTPVIVAGDFNVGQRPARQAYFTAHLRKWGERAPG- 276 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---- 288 ++ C A + +P D A + + D + Sbjct: 277 ----AVRDALHSCLAAPAICGAMPSDAAFSLARARDWELAVPGERAELAVDGLSVPFGHE 332 Query: 289 --GKRLSDH 295 + LSDH Sbjct: 333 IDERMLSDH 341 >gi|16764176|ref|NP_459791.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414087|ref|YP_151162.1| hypothetical protein SPA1940 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179380|ref|YP_215797.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614949|ref|YP_001588914.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550511|ref|ZP_02344268.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992044|ref|ZP_02573142.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230699|ref|ZP_02655757.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236740|ref|ZP_02661798.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240676|ref|ZP_02665608.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263689|ref|ZP_02685662.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466402|ref|ZP_02700264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820041|ref|ZP_02832041.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443379|ref|YP_002040048.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450151|ref|YP_002044841.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471467|ref|ZP_03077451.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734200|ref|YP_002113904.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251468|ref|YP_002145768.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363010|ref|YP_002142647.1| hypothetical protein SSPA1809 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243219|ref|YP_002214776.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390368|ref|ZP_03216979.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929865|ref|ZP_03220886.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352071|ref|YP_002225872.1| hypothetical protein SG0792 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856250|ref|YP_002242901.1| hypothetical protein SEN0759 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913372|ref|ZP_04657209.1| hypothetical protein SentesTe_19906 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419319|gb|AAL19750.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128344|gb|AAV77850.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127013|gb|AAX64716.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364313|gb|ABX68081.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402042|gb|ACF62264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408455|gb|ACF68674.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457831|gb|EDX46670.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709702|gb|ACF88923.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630975|gb|EDX49561.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094487|emb|CAR60004.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215171|gb|ACH52568.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290109|gb|EDY29466.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937735|gb|ACH75068.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602813|gb|EDZ01359.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320859|gb|EDZ06060.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271852|emb|CAR36687.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324628|gb|EDZ12467.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329612|gb|EDZ16376.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334664|gb|EDZ21428.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339836|gb|EDZ26600.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343080|gb|EDZ29844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347702|gb|EDZ34333.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708053|emb|CAR32344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246071|emb|CBG23873.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992555|gb|ACY87440.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157398|emb|CBW16887.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911837|dbj|BAJ35811.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085086|emb|CBY94873.1| Uncharacterized protein ybhP [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226386|gb|EFX51437.1| Endonuclease/Exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616289|gb|EFY13198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619539|gb|EFY16414.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622765|gb|EFY19610.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628677|gb|EFY25464.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631615|gb|EFY28371.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637141|gb|EFY33844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641659|gb|EFY38295.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644546|gb|EFY41086.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648478|gb|EFY44930.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654215|gb|EFY50538.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658130|gb|EFY54397.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663604|gb|EFY59806.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670340|gb|EFY66480.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671576|gb|EFY67698.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676932|gb|EFY72999.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682857|gb|EFY78876.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686536|gb|EFY82518.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713851|gb|EFZ05422.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129120|gb|ADX16550.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194567|gb|EFZ79760.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199102|gb|EFZ84198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202057|gb|EFZ87116.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208917|gb|EFZ93854.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215246|gb|EFZ99991.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220835|gb|EGA05273.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227306|gb|EGA11474.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229924|gb|EGA14047.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233149|gb|EGA17245.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240884|gb|EGA24926.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243201|gb|EGA27221.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248740|gb|EGA32668.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251744|gb|EGA35611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258764|gb|EGA42421.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260691|gb|EGA44296.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267872|gb|EGA51351.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268742|gb|EGA52202.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622531|gb|EGE28876.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627113|gb|EGE33456.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987744|gb|AEF06727.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 252 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + + + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVGGSEK-------RGVLYCRITPPMLNRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L ++ + Q L W+ ES P ++AGDFN D K Sbjct: 144 -----GLRESHRQA------QLTMLAGWVNALPES-EPVLVAGDFN---------DWRQK 182 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P ++ + + +P+ +D+ K S + + Sbjct: 183 AGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYVKNANASSPTALP------L 234 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 RNWRHLSDHAPLSAEIHL 252 >gi|290998796|ref|XP_002681966.1| predicted protein [Naegleria gruberi] gi|284095592|gb|EFC49222.1| predicted protein [Naegleria gruberi] Length = 354 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 99/330 (30%), Gaps = 64/330 (19%) Query: 22 QKVRLVSWNINTL------SEQEGVSLWKNSVKR-----------------TTSDYTLL- 57 R+ S+N+ L ++ + + K + R D + Sbjct: 41 HTFRIASFNVENLYGRYCFNKAQMAKISKQCLGRKGSLEFGVNDVQTNLTIADEDSKRIT 100 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNT-------WCIFYSTERLINHSKRDSNNDI 110 + K ++AD++ L E+ S + F + + I I Sbjct: 101 AEAIKQVNADVICLMEVESLQVLDS-FNEKYLQSMNYAYSILIDGRDPR---------SI 150 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCF 169 + R V + + + + +R +EL +E + + HL S Sbjct: 151 DVGVLSRYPIVNIRSNRHATYPGEKTRYIF-SRDLLELDIEFPGNNNLTIYATHLTSMSK 209 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQK---KESLVPFVIAGDFNRK------INYLGN 220 Q ++ D I + K F++ GD N + L Sbjct: 210 GREESKDRR------LVQVDYICDRIEKSWKDKNYKGNFIVLGDMNDYNDSETSLGKLLK 263 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESF--SE 277 +D I +R NA L + ++ + A + ++ Sbjct: 264 HDHMADIISQRLPSDEQWTHYYNRGNAYNQLDYMFISKHLLLRNPRAKPVIFRKGLPKRA 323 Query: 278 ILYNEDDIKSRGK---RLSDHCPISIDYDF 304 + IK G+ + SDHCP+ +D F Sbjct: 324 HSFTGKRIKGVGQNEPKASDHCPVYVDLSF 353 >gi|224582626|ref|YP_002636424.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467153|gb|ACN44983.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 252 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + + + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVGGSEK-------RGVLYCRITPPMLNRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L ++ + Q L W+ ES P ++AGDFN D K Sbjct: 144 -----GLRESHRQA------QLTMLAGWVNALPES-EPVLVAGDFN---------DWRQK 182 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P ++ + + +P+ +D+ K S + + Sbjct: 183 AGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYVKNANASSPTALP------L 234 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 RNWRHLSDHAPLSAEIHL 252 >gi|49475800|ref|YP_033841.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49238607|emb|CAF27848.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 260 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 103/304 (33%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNI R + Y L + DIV LQE+ S + + Sbjct: 1 MKIVTWNI------------AGIKARHETLYQWL----QQNRPDIVCLQEIKSTD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP++ + + +A+ KK + + P + Sbjct: 42 FPRD-------AIESLGYHIETHGQKSFNGVAILSKKTPDEVIRQLPGNDKDEQT----- 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E + N I V ++L + ++S + Y + + L + Sbjct: 90 RY-IEAVYSTNKGVIRVASLYLPNGNPINSEKYPYK------MEWMERLYTHAKSLLKYE 142 Query: 203 VPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEKDS-- 243 P V+AGD+N ++ + ++ I IR + S Sbjct: 143 EPLVLAGDYNVIPTPLDAKTPKEWSDDALFLPQTRQAFQRIIHLGFYDAIRNVTDTPSFS 202 Query: 244 --RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 A +N ID+ ++ A LI Y++ +++ + SDH P+ I Sbjct: 203 FWDFQAAAWRKNNGIRIDHLLLSPEAVDQLI------CAYSQKEVRGYQ-KPSDHTPVWI 255 Query: 301 DYDF 304 D +F Sbjct: 256 DLNF 259 >gi|152964513|ref|YP_001360297.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359030|gb|ABS02033.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 344 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 30/168 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 L + D+V LQE+ + + VFP+ + + ST + Sbjct: 121 LEDLLRRGRPDVVALQEV--VPSQQRDYAGVFPEYPYRSYTSTSTGGS------------ 166 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFL- 170 R+ + + YP++ + G R A + +++ G+++ VL +HL S C L Sbjct: 167 ----REGDGDAVWSKYPIVSVEPVTGLPEGARPADVVTLDVEGRRLAVLSVHLASPCLLC 222 Query: 171 ------DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + + +A+ D + S V+ GD N Sbjct: 223 SPDKVARNPAGNTGDAARVRVAEARRYADLARSLQASGAAVVLGGDLN 270 >gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] Length = 289 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 56/300 (18%) Query: 21 AQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSY 77 A + +++NI L+ + R + L+ Y D++ +QE+ Sbjct: 22 ADRFSAMTYNIRLDLASDGDNAWP----HRRGAVTNLVGYY----SPDLIGMQEVLLHQK 73 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDS----NNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ P + S D T +A + Sbjct: 74 QAIEADLP--RYIFVGVARDDGKEQGEFSPLGFRRDRFTLVA--SGTFWLSPTPDAPSRG 129 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDI--HLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ A R A ++ ++ +L + H F + S L + Sbjct: 130 WDA---ALPRIASWARLKDRSSRLTLLAVNTH-----FDHVGKEARLESARQLRR----- 176 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNN---DD------FWKTIDPNDSLIRFPKEKD 242 WI + V+ GDFN ++ ++ D T+ + + P Sbjct: 177 --WIGANRRRGETVVLMGDFNSPVDSPPHDAITDPAPGPAALHDTLAISRTPHFGPLGTF 234 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + PID+ ++ + + GK SDH P+ D Sbjct: 235 TGF--DIERNDPSPIDHIFVNDGTAVLRHATLTQQ---------TGGKLPSDHYPVLADL 283 >gi|237799461|ref|ZP_04587922.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022317|gb|EGI02374.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 261 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 45/256 (17%) Query: 57 LRQYAKNLDADIVFLQEM-GSYNAVAKVFPK----NTWCIF---YSTERLINHSKRDSNN 108 LR+ +++ ADIVFLQE+ G + A+ + + ++ + + Sbjct: 43 LREAVRSVSADIVFLQEVHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDG 102 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 D A+ + + Q + + R +++ N + + +HL Sbjct: 103 DHGNALLSKYPII---QHENLDISIDGTEQRGLLHCILDV---PNHGHVHAVCVHL--GL 154 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 F QQ + L + + + P ++AGDFN ++ D Sbjct: 155 FESHRR-----------QQLKLLAE-LMARLPEGEPVIVAGDFN---DWRQRADALLH-- 197 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L E+ K+ + P+ +D+ + S + Sbjct: 198 --GTGLHEVFVERFGA--PAKSFPARWPL--LRLDRIYVRNATSHSPKVLS------SRP 245 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 246 WSHLSDHAPLAVELTL 261 >gi|237717287|ref|ZP_04547768.1| metallophosphoesterase [Bacteroides sp. D1] gi|237719038|ref|ZP_04549519.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262406053|ref|ZP_06082603.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|293371916|ref|ZP_06618320.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|294648117|ref|ZP_06725660.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806860|ref|ZP_06765685.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480123|ref|ZP_06998322.1| secreted protein [Bacteroides sp. D22] gi|229443270|gb|EEO49061.1| metallophosphoesterase [Bacteroides sp. D1] gi|229451816|gb|EEO57607.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262356928|gb|EEZ06018.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|292633162|gb|EFF51739.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636501|gb|EFF54976.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445889|gb|EFG14531.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295085514|emb|CBK67037.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] gi|298273932|gb|EFI15494.1| secreted protein [Bacteroides sp. D22] Length = 263 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 68/258 (26%), Gaps = 48/258 (18%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNND 109 + L + K+ D V LQE+ S K P F S D Sbjct: 40 ASLEELAHHIKSFKPDFVALQEVDSKTD-RKRTPHQKGKDFISELAYHTGMFGLYGKTID 98 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 T + S + R +E L E+ I HL Sbjct: 99 YSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGLFEMGNDTIVFTSTHL----- 153 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWK 226 S ++Q +++ P ++ GDFN + G + F Sbjct: 154 -------DVNSQETRAEQIKFITGHFK---NYKYPVILGGDFNARHYSEAIRGMDSWFAA 203 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + D P K IDY +I + L Sbjct: 204 SNDDFGMPAWKPVIK---------------IDYLFAYPQKGWRVISTQTVQSL------- 241 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH PI + ++ Sbjct: 242 -----LSDHLPIITELEY 254 >gi|160884067|ref|ZP_02065070.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|299144720|ref|ZP_07037788.1| putative secreted protein [Bacteroides sp. 3_1_23] gi|156110409|gb|EDO12154.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|298515211|gb|EFI39092.1| putative secreted protein [Bacteroides sp. 3_1_23] Length = 260 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 68/258 (26%), Gaps = 48/258 (18%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNND 109 + L + K+ D V LQE+ S K P F S D Sbjct: 37 ASLEELAHHIKSFKPDFVALQEVDSKTD-RKRTPHQKGKDFISELAYHTGMFGLYGKTID 95 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 T + S + R +E L E+ I HL Sbjct: 96 YSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGLFEMGNDTIVFTSTHL----- 150 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWK 226 S ++Q +++ P ++ GDFN + G + F Sbjct: 151 -------DVNSQETRAEQIKFITGHFK---NYKYPVILGGDFNARHYSEAIRGMDSWFAA 200 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + D P K IDY +I + L Sbjct: 201 SNDDFGMPAWKPVIK---------------IDYLFAYPQKGWRVISTQTVQSL------- 238 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH PI + ++ Sbjct: 239 -----LSDHLPIITELEY 251 >gi|15805383|ref|NP_294077.1| exodeoxyribonuclease III [Deinococcus radiodurans R1] gi|6458033|gb|AAF09936.1|AE001896_1 exodeoxyribonuclease III [Deinococcus radiodurans R1] Length = 283 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 95/296 (32%), Gaps = 67/296 (22%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +++ ++N+N L +L K L + ++ D++ LQE+ Sbjct: 31 LTGPLKVTTFNVNGLRS----ALRKG-----------LADWVESNQPDVLLLQEV-RAEP 74 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + P ++S + ++ +A+ + + LG Sbjct: 75 MPDALPG-----YHSAWFPAQKAG-------YSGVAILSRLPLKDVR----LGMPHDEMD 118 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A R ++ + + ++L S ++ + +L+ + W+++ Sbjct: 119 AEGRVVSAVVAG-----VRFVSVYLPSGSSGEARQGFKD---RVLAD----YQAWVSELL 166 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-----IRFPKEKDSR---CNANK-- 249 + P VI GD+N I + + W++ N + C+ + Sbjct: 167 AAGEPVVIGGDYN--IAHREIDLKNWRSNQKNSGFLPHERTWMTAHLAAGLVDCHRDCLG 224 Query: 250 ------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N+ N + I S + R RLSDH P++ Sbjct: 225 EEAEYTWWSNRAN-----AYANNVGWRIDYLLSAGVRVSGVRSDRSVRLSDHAPLT 275 >gi|118373801|ref|XP_001020093.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89301860|gb|EAR99848.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 271 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 100/295 (33%), Gaps = 48/295 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNAVA 81 + WN TL++ S K ++ DY +ADI+ L+E+ Sbjct: 6 TISQWN--TLADSLSDSFPKCDLQYLKWDYRSQNIKNHLLNEANADIICLEEVDHP---- 59 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 VF + T ++ H K + + A+ K+ ++L+ + D Sbjct: 60 -VFFSS---FLDQTHEIVFHKKPEGEDGQLV--AISKQKFQILKHQAIQYKSGDGKKDMN 113 Query: 142 NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS-QQAQWLKDWITQKK 199 ++++ K+ +L HLK+ LL +Q I Q Sbjct: 114 QSYWSLIILDKQIDKQFLLLVTHLKA--------KKQFEDIRLLQVEQILEHIQKIQQDY 165 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP--- 256 +P +IAGDFN + Y + I L ++K + + P Sbjct: 166 SKDIPILIAGDFNAEPTYSCI-----QKIKQQGFLKSAYEDKGLTFT---TYKVREPNDV 217 Query: 257 ----IDYFVMDQNAYKFLIQESFSEILYNEDDIKS--RGKRLS-DHCPISIDYDF 304 IDY QN+ + L S + + + + S DH +S+ F Sbjct: 218 QIRMIDYIFYTQNSIELL---SIKNLPTQDQIGPNGLPNQTFSGDH--LSLTATF 267 >gi|299139581|ref|ZP_07032755.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8] gi|298598509|gb|EFI54673.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX8] Length = 1327 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 74/357 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLL- 57 R V+ + + + ++ + S+NI S + + +S TS+ L Sbjct: 582 NRTKVVPGMVPQLLAAPTPGKQFTVASFNIERFYNTSSTDNLYFVPSSGTTATSEAATLT 641 Query: 58 -RQYAKNLD------------ADIVFLQEMGSYNAVAKVFP--------KNTWCIFYSTE 96 Y++ L DIV ++E+ + + + N + + + Sbjct: 642 PAAYSRRLQKLSLAIRNVLNTPDIVTIEEVENQSVATDIANQINSDAGVPNLYTGYSTDN 701 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 I V+ V Q S G ++F+ + +N + Sbjct: 702 TT---YFTQDGTGISVGFLVKNS--TVDQLSVTQFGQGETFTPT----TSNSPITLNDRP 752 Query: 157 IWVLDI-----------------HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 VL H+K+ +DS +T + L QA+ + +I + Sbjct: 753 WMVLSAGIKRAGASDYPVTVIVNHMKALTGVDSTTSTSTRQKKEL--QAEDIAKYIQTLQ 810 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWK----------TIDPNDSLIRFP---KEKDSRCN 246 + + GDFN G D + + + Sbjct: 811 AAGKHVISGGDFNAFEFSDGYTDTLATYTNVNILPSDQVVQPGTAGLVTPSLVDLALNMA 870 Query: 247 ANKNLRNKI-----PIDYFVMDQ---NAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ V+ +F+ ++ + + R SDH Sbjct: 871 PSDRWSYVEDGDAQILDHMVVTPELAAGTQFVYAHLDADFPLTAYNDATTPARTSDH 927 >gi|301167386|emb|CBW26968.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 330 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 114/323 (35%), Gaps = 60/323 (18%) Query: 25 RLVSWNINTL-----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + S+N+ L S++ +L+K + L + ++D+DI FL E+G ++ Sbjct: 10 SICSFNVENLFLPPYSDEASYTLYKYEKSKDKV--ERLAKAILDIDSDIYFLCEVGGEDS 67 Query: 80 VAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV----LQQSYPL-- 130 + + + + +S+R I A V+K + + PL Sbjct: 68 LKNFVSEYLNDNYHYSL----IPGNSER----GIELAYLVKKGSPFSFKHFTHKRRPLNF 119 Query: 131 --------------LGAKDSFSRA-GNRRAVELLVEINGKK---IWVLDIHLKSFCFLDS 172 +G K + +R EL + + + + +L +HLKS D Sbjct: 120 NYPHEEKENKYQMSMGKKRVYKSHLPSRDIAELRIFKDDETKPFLILLGVHLKSQLDKDG 179 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 ++ + +Q + + ++ + VP ++ GDFN K D +KT+ Sbjct: 180 IDFGGKLRRAAEFKQLIETYNVLNKRYHNKVPILLLGDFNGK-ACKEETDIEFKTLYETT 238 Query: 233 SLIRFPKEKDSRCNANKNLR--------NKIPIDYFVMDQNAYKFLIQ--------ESFS 276 L + + A ++ +DY + ++ + + ++ Sbjct: 239 DLEDVLEVIEEPKEARISIHIFDKQGVDQGHQLDYIFIPKSLHSQINAKLSGLYNYKNEE 298 Query: 277 EILYNEDDIKSRGKRL-SDHCPI 298 Y +L SDH PI Sbjct: 299 GAPYPRPTSLYERYQLPSDHFPI 321 >gi|300309579|ref|YP_003773671.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300072364|gb|ADJ61763.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 99/305 (32%), Gaps = 65/305 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 K+R+ ++NI +GV+ + + L+Q LD DI+FLQE+ NA Sbjct: 2 KLRVATYNI-----HKGVTSFAGRPR-----ILALKQALAQLDPDILFLQEVQGRHDLNA 51 Query: 80 VAKV--FPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAK 134 + +P+ + + + + + H A+ R + + Q + Sbjct: 52 LRHASNWPQQGQHEYLAGDTHHAAYGMNAVYDHGHHGNALISRFEIASIRNQDVSDHAYE 111 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 +R + +V + G ++ IHL F +Q L Sbjct: 112 -------SRGILHCVVPVEGVEVHCYVIHL--GLFAGGRR-----------RQIDALIQA 151 Query: 195 ITQKKESLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPND----SLIRFPKEKDS 243 ++ P +IAGDFN R + + + PN +R + Sbjct: 152 VSTSSPPDAPLLIAGDFNDWTNQLSRTLYQNLGVTEVFDQPQPNARGVMQGLRRLGGLSA 211 Query: 244 RCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKS-RGKRLSDHCPIS 299 + +P +D + F + +K RLSDH PI Sbjct: 212 PIRPARTFPAMMPWLRLDRIYV----------RGFRVET--AEVLKDGPWARLSDHAPIV 259 Query: 300 IDYDF 304 + Sbjct: 260 TELHL 264 >gi|269957862|ref|YP_003327651.1| 5'-Nucleotidase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269306543|gb|ACZ32093.1| 5'-Nucleotidase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 1577 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 92/308 (29%), Gaps = 50/308 (16%) Query: 39 GVSLWKNSVKRTTSDYTLLRQY-------AKNLDADIVFLQEMGSYNAVAKV-------- 83 V+ N+ R D L++ LD D+V L E+ + A+ + Sbjct: 529 AVNSCPNNGPRGAWDAASLQRQQDKIVAAVNALDVDVVGLLEIENSAALGEEPDEALATL 588 Query: 84 -------FPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKD 135 + W S+ L + S++D+ + I AV + + Sbjct: 589 TDALNADAGGDVWAYVPSSAELPDASEQDAITNAIIYRQAVVEPVGEARALGDQSAAGQ- 647 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS-----QQAQ 189 +F A E G +V+ HLKS + + S +QA Sbjct: 648 AFGNAREPIGQEFAPAGGGDPFFVVVNHLKSKGSAGPWPGDADAGDGQGASNESRVRQAT 707 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+DW+ + E + GDFN + D + + S + Sbjct: 708 ALRDWVDEVTEPGEAVALIGDFN----AYTHEDPL--QVLYDAGYTDAASTLSSDQWSYS 761 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------------GKRLSDH 295 +D+ +++ A + EI +E SDH Sbjct: 762 FGGLSGSLDHVLLNGPATERATGADVWEINADESIALQYSRYNYHGTLFHAPDQFASSDH 821 Query: 296 CPISIDYD 303 P+ + Sbjct: 822 NPVVVGLT 829 >gi|323494918|ref|ZP_08100010.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] gi|323310882|gb|EGA64054.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] Length = 441 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 94/293 (32%), Gaps = 48/293 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++++++NI L+ Y L+ +Y K D++ LQE+ G + Sbjct: 177 TLKMMTYNIWALTAIASHI---------EDRYQLIPEYVKGY--DVLALQEVFASGRDSF 225 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKDS 136 + ++ + + + +IH I R V Q +P D Sbjct: 226 LRELAKEYPYQTKMLDK---------DGFNIHDGGVMIVSRYPIVNQAQYVFPDCTGTDC 276 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ G A + GK + H + D+ + + Q A L Sbjct: 277 FADKGVNYAEIIK---GGKAYHIFATH-TASYDTDTARDYRQRQFKQMRQLALSLN---- 328 Query: 197 QKKESLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 V +GDFN + G+ + + + +S + N Sbjct: 329 --ISQNETVVYSGDFNVNKRKFPGDYQQMITNLSAIEP--DYSGYTESTFDPRINDFAGE 384 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N +DY ++ ++ ++ + + + LSDH P++ Sbjct: 385 AMSGGENVEYLDYVMVSNEYQIKSSNDNRVDVPRSTGERLWKHYNLSDHFPVT 437 >gi|182411832|ref|YP_001816898.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839046|gb|ACB73298.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 499 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 54/254 (21%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTT-----SDYTLLRQYAK 62 + FF + A+ +V +N+ L + R T + + Sbjct: 9 IAFFSALALTAAARPFTVVVYNVENLVDADGQARFEEYQAPRYTPAHVLTKVQAVASVLA 68 Query: 63 NLD----ADIVFLQE--MGSYNAVAKVFPKNTWCIFY---STERLINHSKRDSNNDI--- 110 D D+V LQE + A A + + + ++ + R + +I Sbjct: 69 RFDDGRGPDVVMLQEIEVDETPAAAAL----DYEAMLRRYADRKIEDMLGRGFDQEIADL 124 Query: 111 ------------------HTAIA--VRKKNVR------VLQQSYPLLGAKDSFSRAGNRR 144 H +A VR R V +P+ + R Sbjct: 125 PAEALLAKALADRGLTGYHVIVAENVRSGGDRPLSQKCVTLTRFPVKAVRSH-PTVDARA 183 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 +E+LVEI+G +++ + H KS + E T + + L Q+ + +++ Sbjct: 184 ILEVLVEIDGATLYLFNNHWKSGAGDAATEPTRAANARTLRQRLDEI-----LRQDPQAD 238 Query: 205 FVIAGDFNRKINYL 218 VI GDFN + N Sbjct: 239 IVIGGDFNSQYNQK 252 >gi|126735134|ref|ZP_01750880.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] gi|126715689|gb|EBA12554.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] Length = 332 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 98/335 (29%), Gaps = 57/335 (17%) Query: 24 VRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTL------LRQYAKNLDADIVFLQEMG 75 +R+ ++N+ + +L + + D T L LDAD+V + E Sbjct: 1 MRIATYNVEWFNSLFDNTGALIDDDSWSSRWDVTKAQQTAGLGVVFGALDADVVMIIEAP 60 Query: 76 SYN---AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI------AVRKKNVRVLQQ 126 + K + D+ +I AV Sbjct: 61 DTSPHRDARKALAHFAARFDLRAREAVTGFTNDTQQEIVLLYDPDVLDAVHDPQNAADAP 120 Query: 127 SYPLLGAKDSFSRAGN------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + D A + +E+ + + ++ +H KS + + Sbjct: 121 QFDGQFHMDVDVDAHPDPITWSKPPLEIALTTGSGPVRLIGVHAKS--KAPHGARNDAEA 178 Query: 181 CSLLSQ-------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-------- 225 + Q Q WL+ + Q + ++ GDFN L + + Sbjct: 179 TRISIQNRRKQLAQCVWLRKRVEQHLAAGEHLIVLGDFNDGPG-LDEYEKLFGRSGIEIV 237 Query: 226 -------KTIDPNDSLIRFPK----EKDSRCNANKNLRNKIPIDYFVMDQNAYK----FL 270 + DP+ ++ + +R + +DY ++ Q + + Sbjct: 238 LGEGAEEQLFDPHAQMVLSRRFGASPSTARFKRKGEPYLQALLDYVMVSQGLRQKAPIWQ 297 Query: 271 IQESFSEILYNEDDIKSRG-KRLSDHCPISIDYDF 304 I F D + G SDH P+ +D D Sbjct: 298 IWHPFDHPACYADVVLRDGLLAASDHFPVVLDIDL 332 >gi|118475423|ref|YP_891999.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus subsp. fetus 82-40] gi|118414649|gb|ABK83069.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus subsp. fetus 82-40] Length = 431 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 94/298 (31%), Gaps = 55/298 (18%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQ----EGVSLWKNSVKRTTSDYTLLRQY---A 61 ++ L S++ ++++ ++N+ L + +K+ T L Sbjct: 3 VLILLFIAIFSISAELKIATYNVENLFDDNIDGSEYKDFKDGTWNTAKYIQKLNNISRVI 62 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K LDAD + + E+ + + + ++ K+ + + + +N + + V K Sbjct: 63 KALDADFISVLEIENSSVLKQLAMKSGYKFY----------EFATNKNAPVGLGVMSK-- 110 Query: 122 RVLQQSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 YP+L ++ R + + G+ I H + + + Sbjct: 111 ------YPILSSRKIVIPNLKTRPILVSEISFGGETIKFFSTHFPA---AKNSLKDRKTA 161 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + + I + +I GD N Y ++ + Sbjct: 162 ANTM----------IKAVENEKNS-IILGDLNSNYGYGF----LLNDLNGEFKNLWEFVG 206 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDH 295 R + + ID+ ++ + + SF + + S + SDH Sbjct: 207 NRDR----SSYKKGGAIDHIMLQNSFFNGNIRYKNSSFGV--FKPSFLSS--GKFSDH 256 >gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 262 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 47/248 (18%) Query: 64 LDADIVFLQEM---GSYNAVAKVFPKNTWCI-FYSTERLIN--HSKRDSNNDIHTAIAVR 117 +DADIVFLQE+ A +F + + + +T+ + + + H A+ Sbjct: 34 MDADIVFLQEVQDRNDRLVAAALFDPDHTQLNYLATDSYPHSVYGRNAVYEHGHHGNAIL 93 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ ++ ++ L D R R + + ++NG + ++ +H Sbjct: 94 SRHPILMSEN---LDISDH--RFEQRGLLHAVADVNGVEAHLICVH--------FGLFAR 140 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF---NRKINYLGNNDDFWKTIDPNDSL 234 S + +QA+ L + + S P VIAGDF N +++ I Sbjct: 141 SRA-----RQAEALVERVRTVVPSTAPLVIAGDFNDWNHRLD---------SQICNTLGA 186 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + +R + + +D + + + + + SD Sbjct: 187 VEASHARGARLHTFPSHMPWWQLDRIYVRGFEIERAHALTGRD-----------WAQRSD 235 Query: 295 HCPISIDY 302 H P+ + Sbjct: 236 HVPLVAEL 243 >gi|94311051|ref|YP_584261.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93354903|gb|ABF08992.1| Metal-dependent hydrolase [Cupriavidus metallidurans CH34] Length = 284 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 69/228 (30%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQEM----- 74 + L+SWNI R L + L DAD++ LQE+ Sbjct: 1 MELISWNIQW--------------GRGADGKVDLARIVDTLRGMADADVLCLQEITRGFS 46 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQ 125 ++ + P + + ++ ++ + RD + IA R + + Sbjct: 47 DLAGHPGPDQVAELSALLP--DYQVIFA--PGVDRTHRDGSPRQFGNVIATRLPVREIFR 102 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + P D S R A+E+ V+ + + ++ HL + + + Sbjct: 103 HALPWPADPDVASM--PRVALEVTVQAGSRLLRIICTHL------EYYSTSQRAA----- 149 Query: 186 QQAQWLKDWITQ----------KKESLVPF---------VIAGDFNRK 214 Q + L+DW Q + PF ++ GDFN + Sbjct: 150 -QTEALRDWHVQACDHARHPGRSENRPGPFTPEPRPSEAILCGDFNSR 196 >gi|209549080|ref|YP_002280997.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534836|gb|ACI54771.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 263 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 80/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + +A+ K + + + P + Sbjct: 38 IDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDPLDEQS----- 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + + V I+L + +D+ + Y + + L+ + ++ Sbjct: 90 RFLEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143 Query: 203 VPFVIAGDFNRKINYLGNND----DFWK----------------TIDPNDSLIRFPKEKD 242 V+AGD+N +D W+ +R + Sbjct: 144 EMLVLAGDYN---VIPEPHDCFDPKVWESDALFLPQTREAFRRLENLGLTDAVRATTDAT 200 Query: 243 ---------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N I ID+ ++ A + + + + ++ S Sbjct: 201 QFYSFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPS 250 Query: 294 DHCPISIDYDF 304 DH P+ +DF Sbjct: 251 DHVPVIAYFDF 261 >gi|154491719|ref|ZP_02031345.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] gi|154087960|gb|EDN87005.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] Length = 287 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 101/318 (31%), Gaps = 57/318 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K + L L+ A+ ++ ++S+NI ++ +G + W+ D Sbjct: 1 MKKVLFYLFTLLISTNIVFAEHLDNEMNVMSFNIRMSTKSDGANWWE-----YRKDLA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K D D+ QE+ + + S +V Sbjct: 54 ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPILYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 K L + +G K + A R A + + +GK+ + L+ HL + Sbjct: 114 VKSGNFWLAEDMNAVG-KKGWDAACERVATWAIFKDKKSGKEFFFLNTHL-----DHMGQ 167 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 SL+ +Q + L +P ++ GDFN + +D D D Sbjct: 168 VARHEGASLVLKQVKLLSR--------NLPVIVTGDFN----AVPTDDPIKVLTDEKDPR 215 Query: 235 IRFPKEKDSR-CNANKNLRN---------KIPIDYFVMDQNAYKF---LIQESFSEILYN 281 + C + + ++ IDY + N ++ ES + Sbjct: 216 HLTHARTLAPLCYGPEWTFHDYGRVPLDERVWIDYIFVKGNVKVLRHGVLAESLDNLYP- 274 Query: 282 EDDIKSRGKRLSDHCPIS 299 SDHCP+ Sbjct: 275 -----------SDHCPVI 281 >gi|152993433|ref|YP_001359154.1| hypothetical protein SUN_1850 [Sulfurovum sp. NBC37-1] gi|151425294|dbj|BAF72797.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 514 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 109/337 (32%), Gaps = 85/337 (25%) Query: 21 AQKVRLVSWNINTL--SEQEG------VSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFL 71 ++ ++ S+N+ L + +G + N KR + +LDADIV L Sbjct: 15 SKPFKVASYNVENLFDANHQGTEYEEYIPGKHNWTKRMAEIKLDHTTEVLCDLDADIVAL 74 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV--RVLQQSYP 129 QE+ + + VF L KR ++AI +K L +P Sbjct: 75 QEIENES----VF-----------NALQKRLKRVGCPYRYSAITHKKGAPIQVALLSRFP 119 Query: 130 LLGAKDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L +D R +E+ E++G + + H KS +E+ L ++ Sbjct: 120 LKKHRDLQVSFSPYVRNILEVEAEVDGYPLTIFANHWKSK-SRKGVESKRIAYARTLEKR 178 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKI-NYLGNNDDF------------WKTIDPN--- 231 + ++I GD N YL KTID N Sbjct: 179 ILSMPA--------SKEYIILGDLNSNYDAYLTLPKKLNDTQGKTGINHILKTIDNNKLI 230 Query: 232 --DSLIRFPKEKDSRCNANKNLR---------NKIPIDYFVMDQNAYK----FLIQESFS 276 + + P+ + + ++ +D+ ++ + + + SF Sbjct: 231 SKSQIRKAPEGMHYSTWNELSYKERWSHRFYGHRSTLDHILLPPSMFDGKGIDYVNNSFR 290 Query: 277 EILYNEDDI---------------KSRGKRLSDHCPI 298 + D + K G+ SDH P+ Sbjct: 291 V--FKTDRLFTSKGYINRWQIKNGKHTGRGYSDHLPV 325 >gi|294676364|ref|YP_003576979.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter capsulatus SB 1003] gi|294475184|gb|ADE84572.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacter capsulatus SB 1003] Length = 342 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 97/345 (28%), Gaps = 67/345 (19%) Query: 24 VRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ +N+ + ++ + V R L L+AD + + E Sbjct: 1 MRIACYNVEWFTALFDRRGRMLEDAEESGRYGVTRAEQ-LGALGIVFTALEADCILIVEA 59 Query: 75 GSYNAVAKVFP----------------------KNTWCIFYSTERLINHSKRDSNNDIHT 112 N K P I + + D T Sbjct: 60 PDDNTRRKTVPMLEAFAAKFGLRQRRAVMGFANDTQQEIAALYDPDVLRLWHDPAEGSAT 119 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS----- 166 A R + FS+ +E+L GK + ++ +HLKS Sbjct: 120 --APRFDLSLKIDLDIDDRLDTVHFSKPPLELQLEVLTGPAAGKLLRLIGVHLKSKAPHG 177 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNN 221 S + Q WL+ + + ++ ++ GDFN + L Sbjct: 178 ATDPASGVRLAIENRRKQLAQCLWLRRRVDEVLDAGESLIVLGDFNDGPGLDEYEALFGR 237 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----------------LRNKIPIDYFVMDQ 264 + R + +R K +DY + Sbjct: 238 SGLEIVLGTGGPPARQLHDPHARLPRGKTTALPASARFFIPEPPPGQFFSAMLDYIALSP 297 Query: 265 N----AYKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 + A K+ I F + Y +++ + SDH P+S+D F Sbjct: 298 DLCAHAPKWRIWHPFDDPGCYRVAELREALLQASDHFPVSVDLAF 342 >gi|114765781|ref|ZP_01444876.1| hypothetical protein 1100011001350_R2601_23720 [Pelagibaca bermudensis HTCC2601] gi|114541888|gb|EAU44924.1| hypothetical protein R2601_23720 [Roseovarius sp. HTCC2601] Length = 306 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 100/305 (32%), Gaps = 58/305 (19%) Query: 18 ASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ + N++ L Q + +R L + L+AD++ QEM Sbjct: 37 PPPEDALRIATLNVHYIDLRGQGEGRWSRAGWERRKP---ALGAAVEALEADVIAFQEME 93 Query: 76 S--------YNAVAKVFPK----------NTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 S N + W F ST+ + + + D Sbjct: 94 SFRGGNADTDNLARRYLLDRLSGYEAAAIGDWRTFPSTQPIFYRTGKLELVDQGWFFFSD 153 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 +V + A S++ R ++ V+++HL+ Sbjct: 154 TPDVIYSRTFDGSWPAFASWAAFRQRGGGDV--------FRVMNVHLE----------YR 195 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S S LS A+ + D + +S P V+AGDFN + + ++++ +RF Sbjct: 196 SASNRRLS--AELIADRLRPVIDSGTPVVLAGDFNALAGW-----EVMESLEAAG--LRF 246 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 PK + + ++ L ID+ I+ G +DH P Sbjct: 247 PKVPGATYHLDRGLHLLPAIDHIGHSPGLRGVGGPH--------VPQIRVDGVWPADHHP 298 Query: 298 ISIDY 302 + +D Sbjct: 299 VVLDL 303 >gi|75676002|ref|YP_318423.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] gi|74420872|gb|ABA05071.1| Exodeoxyribonuclease III [Nitrobacter winogradskyi Nb-255] Length = 266 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + +R L + + D+V LQE+ Sbjct: 1 MRIATWNVN------------SVRQR----LDHLITWLRETAPDVVCLQEIKCVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ N +A+ K + D +R Sbjct: 45 EAIEALGYNVVTHGQKTFN------------GVALLSKFPFDETRPRLAGDDGDVQARF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + V ++L + ++ + Y + L ++ ++ +S Sbjct: 92 ----LEGVVTLEHGAVRVACLYLPNGNPPNTEKYPYK------LKWISRLIEYSRERLKS 141 Query: 202 LVPFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDS 243 F++AGDFN + +D ++ +R + Sbjct: 142 EEAFILAGDFNVIPAPCDVYN-SAAWVDDALFRPRTRQAFQTLLGLGLTDALRAVSDAAG 200 Query: 244 R-----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A +N ID+ ++ A L D ++ SDH P Sbjct: 201 EYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSGAGI-------DRHVRGWEKASDHVP 253 Query: 298 ISIDYDF 304 + ID D Sbjct: 254 VWIDLDL 260 >gi|331018945|gb|EGH99001.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 380 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 100/337 (29%), Gaps = 65/337 (19%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S T ++ R + P+ A + + A+ + +G K+ Sbjct: 172 SPHIWGSVGRKLTTLS-RFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 230 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----- 212 V++ HL + D S L +++ + P++I GDFN Sbjct: 231 AVINTHLATAKPGDGTAQKQIASTETL----------LSKLEGGGTPWLIGGDFNLLPLG 280 Query: 213 ----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 W+ P +S P D + Sbjct: 281 QYQRLPEQQRHGYAADSELHALWEK------YPMIPNNTESSGTDRSQWLTHFPNDNRIN 334 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + S S + + +SDH P+ Sbjct: 335 GPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 371 >gi|330448477|ref|ZP_08312125.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492668|dbj|GAA06622.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 352 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 90/236 (38%), Gaps = 40/236 (16%) Query: 14 VPCTASVAQ-KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DI 68 + +AQ +++ S+N+ N L+ + ++N R L+A DI Sbjct: 9 FSSSTPIAQSTIKIASFNLLNYLAPPDAYYDFENIYS-IEQWQKKQRWIVATLNAQQPDI 67 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-----KKNVRV 123 + QE+ S + + + + + F + + I AIA + V Sbjct: 68 IGFQEVFSIDNLKTLLLEAGYPYFETIDTPI-VEGDFIYRSPVVAIASKFPILEASAVEA 126 Query: 124 LQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPS 180 ++ L+G FSR R +++ + HLKS F D L T +P+ Sbjct: 127 ESEAAQLMGWNKFDFSRKPLRATIDI---PHIGATDCYVTHLKSKRSLFDDPLPETITPA 183 Query: 181 CSLLS---QQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKIN 216 + LS +Q L +W + +++++ P ++ GDFN ++ Sbjct: 184 DTALSGFIRQR--LGNWGSAMQRGSEAALLQLAMVKRREQTQYPMILFGDFNDTLS 237 >gi|299530483|ref|ZP_07043903.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] gi|298721459|gb|EFI62396.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] Length = 258 Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 96/315 (30%), Gaps = 92/315 (29%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +++ +WN ++ L+ +L +K T + + + Sbjct: 1 MKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHM------------AFE 48 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLL 131 E Y AV+ + +A + + R + ++ P L Sbjct: 49 E-AGYKAVS------------------------HGQKTYNGVAWITRDTGRDVVRNIPGL 83 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + + ++ +I +++ + + S + Y + Q L Sbjct: 84 DDEQARI-------IATTIDSPNGEIRLINGYFVNGQEPGSEKFAYK------MRWLQAL 130 Query: 192 KDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDS 233 DWI + V+ GDFN I++ D ++ + +D+ Sbjct: 131 HDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHFQRLLQLGLSDA 190 Query: 234 LIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 F + + S + ID+ ++ + + S D + Sbjct: 191 FRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSV-------DRAPRK 243 Query: 289 GKRLSDHCPISIDYD 303 K+ SDH P+ + + Sbjct: 244 NKQPSDHAPVVVTLN 258 >gi|14861058|dbj|BAB62088.1| deoxyribonuclease I precursor [Rana catesbeiana] Length = 353 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 95/321 (29%), Gaps = 71/321 (22%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ L C +++ +NI S + + R +LR+Y + Sbjct: 4 LLLVTLAACFLHAGSALKIAGFNIERFSATK--VDDPVVLNRL---IQILRRY------E 52 Query: 68 IVFLQEM---GSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 ++ +QE+ + V N + + S H R + + + R+ Sbjct: 53 LIAVQEVMNKDDTAIIKLVRELNKATGLSYNLLISD-----HLGRSAYREKYV-YVYRED 106 Query: 120 NVRVLQQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 ++ + + G D F R R + + K + +H S Sbjct: 107 ILKPTEWFHYDDGCENCGTDVFMREPFVARFSS---LTTEVKDFALAVVH-------TSP 156 Query: 174 ENTYSPSCSLLSQQAQWL-KDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + L W K+ + I GD+N +Y+ + + Sbjct: 157 DYAVR--------EVDALFDVWEDAKQRLLMEDIFILGDYNAGCSYVKSAHWPTIRLRQE 208 Query: 232 DSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQ-NAYKFLIQESFSEILYNED 283 SL ++ C P D V+ ++ S Y E Sbjct: 209 ASLQWLIGDNADTTVSTNTNC----------PYDRIVVGGSRLQDSVVPGSAKAFNYQEA 258 Query: 284 DIKSRGK--RLSDHCPISIDY 302 + + SDH P+ ++ Sbjct: 259 YGLTYEETKAASDHYPVEVEL 279 >gi|222085777|ref|YP_002544307.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] gi|221723225|gb|ACM26381.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] Length = 263 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 92/307 (29%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DI LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IENLCQWLKDSDPDIACLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ + + G S R Sbjct: 38 VDEGFPRLEI---EALGYHVETHGQKGFNGVAI----LSKAKPDEVTRGLPGDDSDEQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + V ++L + +D+ + Y + + L+ + + Sbjct: 91 FIEAVFSVPDHGALRVCCLYLPNGNPVDTEKYPYKLA------WMERLRKFAADRLALEE 144 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPN--DSLIRFPKEK----- 241 P ++AGD+N +L ++ ++ +R + Sbjct: 145 PIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQAFRQLENLGFTDAVRTTTDAVKLYS 204 Query: 242 ----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N I ID+ ++ A L + + + ++ SDH P Sbjct: 205 FWDYQAGAWPK---NNGIRIDHLMLSPEAADRLTSTAIEKHM-------RAWEKPSDHVP 254 Query: 298 ISIDYDF 304 + DF Sbjct: 255 VIAHLDF 261 >gi|302131242|ref|ZP_07257232.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 382 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 105/346 (30%), Gaps = 81/346 (23%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 52 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 111 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 112 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 171 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 H + T + LQ P+ A + + A+ + +G K Sbjct: 172 SPHIWGSVGRKLTTLSRFHIDSAERLQLPVPVPDANIISRQFQPKNALLVSYLPLRDGGK 231 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---- 212 + V++ HL + D + +Q ++ + + + P++I GDFN Sbjct: 232 LAVINTHLATAKPGDGTAH----------EQIAATENLLDKLEGGGTPWLIGGDFNLLPL 281 Query: 213 -----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 W+ P +S + +F Sbjct: 282 GQYQRLPEQQRHGYAADSELHALWEK------YPMIPNNTESSGTDRSQW-----LTHF- 329 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKR--------LSDHCPIS 299 NA + + + L+ +K R +SDH P+ Sbjct: 330 --PNASRINGPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 373 >gi|328949215|ref|YP_004366552.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM 2489] gi|328449539|gb|AEB15255.1| Endonuclease/exonuclease/phosphatase [Treponema succinifaciens DSM 2489] Length = 333 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 96/329 (29%), Gaps = 53/329 (16%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTL--SEQEGVSLWKNSVKRT------TSDYTL 56 + L C S +V++ +WN+ T + +G + + +T Sbjct: 15 VLWILFLPFFACCDSGKSEVKIANWNVQTFFDANNDGTEYSEFAKSKTWGEEMYKERLKR 74 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAI 114 L K LDADI ++E+ + N + + I F + E R + + Sbjct: 75 LCSVIKKLDADIFIMEELENSNVL--------FDISNFLAGEWNPRKIYRYACFSKNEGG 126 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHL--KSFC 168 A+ + + L + D + R ++ +++ K + + H KS Sbjct: 127 AIGCGVLSRIPLQKMNLHSLDIRTENEKMPRTRPLSKIEIKLKEKTLSIFVNHWKSKSGG 186 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------ 222 + + C L +++ GDFNR IN Sbjct: 187 EEKTEKWRNREEC--------VLSFFMSHALNEGKAVFAVGDFNRDINDFCVKKNGNVLL 238 Query: 223 --DFWKTIDPNDSLIRFP--KEKDSRCNANKNLRN--KIPIDYFVMDQNAYKFLIQESFS 276 K + L++ E ++ ID + Sbjct: 239 RAWHGKLLGDEGLLVKSTWFDENENLIEPGSYYFREEWSRIDNIFYSGKIEVEDFFPATE 298 Query: 277 -------EILYNEDDIKSRGKRLSDHCPI 298 I Y RG SDH P+ Sbjct: 299 GFWCNENSIPYKYSLWNGRGY--SDHLPL 325 >gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 788 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 100/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GAINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVISNHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + Q+K + P V+ GD N + + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMN-DFEFSKPLEALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ + D Sbjct: 769 HGRVSDHDPVLVQIDL 784 >gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 788 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 100/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GAINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVISNHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + Q+K + P V+ GD N + + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMN-DFEFSKPLEALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ + D Sbjct: 769 HGRVSDHDPVLVQIDL 784 >gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 788 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 100/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ +QEM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVQEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GAINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVISNHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + Q+K + P V+ GD N + + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNHFVQGIQEKNTNAPVVVLGDMN-DFEFSKPLEALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ + D Sbjct: 769 HGRVSDHDPVLVQIDL 784 >gi|116249399|ref|YP_765240.1| hypothetical protein pRL120737 [Rhizobium leguminosarum bv. viciae 3841] gi|115254049|emb|CAK12446.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 242 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 82/267 (30%), Gaps = 64/267 (23%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNND 109 D + +ADIV LQE+ + + ++ + H + Sbjct: 24 DPGRIASVIAEAEADIVALQEVD---VLRRRTGGVDQAHAIASLLKMQAHFHPALSIAEE 80 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + A+ ++ PL + R A+ + + + +K+ V++ HL Sbjct: 81 QY-GDAIITSLPTGAVKAGPLPSIGEQ------RGAISVEILVGNRKLLVVNTHL----- 128 Query: 170 LDSLENTYSPSCSLLSQQAQWLK-DWITQKKESLVPFVIAGDFN-------RKINYLGNN 221 L + Q L W+ + +P ++ GDFN ++ Sbjct: 129 --GLRGRER-----IRQMTTLLNPGWLRGTADEPLPTILCGDFNAIPSSATYRLAARSLK 181 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEI 278 D + ++ P +D+ + + I Sbjct: 182 D----------------VQLAGGAAPRATFPSRYPLMRLDHIFVTDDL-----------I 214 Query: 279 LYNEDDIKSRGKRL-SDHCPISIDYDF 304 + +++R R+ SDH P+ + F Sbjct: 215 VKKAAVLENRLTRIASDHLPLLAEIGF 241 >gi|83409938|emb|CAI64359.1| conserved hypothetical protein [uncultured archaeon] Length = 347 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 110/335 (32%), Gaps = 60/335 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 + K+R+ ++N+ L ++ +R ++R L+ADI+ LQE+ Sbjct: 21 STKLRIATFNLENLDDKP--RQTPTLDER----IAVMRPQLVRLNADILCLQEVNGQEKT 74 Query: 79 -------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQS 127 A+ K+ + +++ + + + ++ V + Sbjct: 75 GQPRRLLALEKLVEGTPYVEYHTVSTMTADGTQVYDERNLVILSRYEIVEHHQYKHDHAP 134 Query: 128 YPLLGAKDSFSR-------AGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTY-- 177 P + + R ++++ + V+++HLKS ++E Sbjct: 135 APWYQKVTAEPQEEEAKEVKWERPIQHAKIKLDQNRFFQVINLHLKSR-LPSNIEGQKLN 193 Query: 178 ----SPSC--------SLLSQQAQWLKD--WITQKKESLVPFVIA--GDFNRKINYLGNN 221 +C S + + Q L+ I + + +I GDFN + + Sbjct: 194 TFTWKTACGWAEGFFVSSMKRVGQALETRMLIDKLFDEDEDALIVVCGDFNAE-SDEVPV 252 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQ 272 + ++ + + C ++ ID+ ++ ++ + Sbjct: 253 EAIRGDVENTGNGKLA-RRALVPCERTIPESSRFSMLYIGQGRMIDHLLVSRSLLPYYTG 311 Query: 273 ESFSEILYNEDDIK---SRGKRLSDHCPISIDYDF 304 L +++ I + SDH P+ ++ Sbjct: 312 SEIHNELLHDESIAFATDKKYPESDHAPVIAKFEL 346 >gi|254458118|ref|ZP_05071544.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] gi|207084954|gb|EDZ62240.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] Length = 336 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 34/216 (15%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLW-KNSVKRTTSD---------YTLL 57 L+ F+ + + + + ++N+ L + E K T S+ + Sbjct: 4 LLLLFVFLTSLFGDKILTIATYNVENLFDLEKKGYKYKEYEPNTKSNWNQKTYKIKLQNI 63 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + K++DADI+ LQE+ S A+ + F ++Y + HTAI V Sbjct: 64 ARVIKDIDADIIALQEIHSLQALKDLRFTLKQNGLYY--------QYYSIADKKHTAIKV 115 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + + S R +E ++I G +++ H K+ E+ Sbjct: 116 ----AILSKLPFTYSKELSVTSTYKYRNILETKLKIYGNDLYMFVNHWKA---KSGPESM 168 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 S L + + V+ GDFN Sbjct: 169 RITSAKSLRNRISEIG--------YDENIVLLGDFN 196 >gi|220917964|ref|YP_002493268.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955818|gb|ACL66202.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] Length = 261 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 82/284 (28%), Gaps = 53/284 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 4 RVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------L 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVR---VLQQSYPLLGAKDSFSRA 140 P + RL + H A + + L R Sbjct: 47 PGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRG 106 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++L ++ V HL + +LLS A L+D Sbjct: 107 CLRADLDL----GPMRVHVFAAHL-----GLHWRERRRQAAALLS--ADILRD-----AA 150 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+ GDFN + +T+ P L + +D Sbjct: 151 LSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLD-RAYVD-- 207 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A + L E +R SDH P+ ++ + Sbjct: 208 ----AALRVLACEVIRT---------PLARRASDHLPLVVELEL 238 >gi|77360643|ref|YP_340218.1| hypothetical protein PSHAa1702 [Pseudoalteromonas haloplanktis TAC125] gi|76875554|emb|CAI86775.1| conserved protein of unknown function [Pseudoalteromonas haloplanktis TAC125] Length = 386 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 76/229 (33%), Gaps = 43/229 (18%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQ----YAKNLDADIVFLQEMGSY 77 ++++ ++N+ N L + + ++ T + +Q Y D++ QE+ S Sbjct: 19 QLKIATFNLFNYL--EPPNAYYEFEKIYTAQQWAKKQQWIIDYLTEHAPDVIGFQEVFSI 76 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------- 130 ++ ++ + F + AIA + V V + Sbjct: 77 ESLQELVRGQGYEHFAVVDT-PEVIDDFIYKRPVVAIAAKYPIVEVAAVQHDNELVATLG 135 Query: 131 LGAKDSFSRAGNRRAV----------ELLVEINGKKIWVLDIH-------------LKSF 167 L A +FSR R V ++ + + + +D H LK+ Sbjct: 136 LSADFTFSRKVLRATVTLPHIGNTDCYVVHFKSKRPMIEVDEHNKALSPEKNIIEILKAN 195 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 S + L + I +++ + P ++ GDFN I Sbjct: 196 VAGGWGSTIQRGSEATL-----LMIQMIARREATQQPMILMGDFNNSIA 239 >gi|332089000|gb|EGI94112.1| endonuclease/Exonuclease/phosphatase family protein [Shigella boydii 5216-82] Length = 253 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 33 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++ GDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVEGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|298291878|ref|YP_003693817.1| exodeoxyribonuclease III [Starkeya novella DSM 506] gi|296928389|gb|ADH89198.1| exodeoxyribonuclease III [Starkeya novella DSM 506] Length = 262 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 95/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + +R L + D+V LQE+ Sbjct: 1 MRIATWNVN------------SVKQRLEHAVAWLGE----TRPDVVCLQEIKCVDEAFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + ++ N +AV + S +D SR Sbjct: 45 EAFESLGYNVAVHGQKGFN------------GVAVLSRLPFDEVSSGLPGDDEDVQSRF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E++V + I+L + +D+ + Y + + LK + + Sbjct: 92 ----IEVVVSTPEGVARICGIYLPNGNPVDTEKYPYKLN------WMKRLKAHVANRLAY 141 Query: 202 LVPFVIAGDFN---RKINYLGN----NDDFWKTIDPN----------DSLIRFPKEKDS- 243 P ++ GD+N ++ ND + + +R ++ Sbjct: 142 EEPLIVCGDYNVIPEPVDAANPAAWVNDALFLPQTRSAFRELIHLGMTEAVRATTDEPGL 201 Query: 244 ----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 202 YSFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVGI-------DKHVRAWEKPSDHVPV 254 Query: 299 SIDYDF 304 +D + Sbjct: 255 WVDLAY 260 >gi|157412901|ref|YP_001483767.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] gi|157387476|gb|ABV50181.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] Length = 281 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 83/312 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N RT + + + ++ DI+ LQE KV Sbjct: 3 IATWNVN--------------SIRTR--LSQIIDWINQVNPDILCLQE-------TKVMD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + ++ + +A+ + ++ P K + + Sbjct: 40 DS---FPTEPFEKLGYAVEVYGQKSYNGVAI-------ISKTKPENVKKGFYGCTNFNQN 89 Query: 146 VEL------LVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT 196 +E+ L+ + I ++++++ + L+S + Y +C L ++ Sbjct: 90 IEIFQDQKRLISADINNIKIINVYVPNGSSLESSKFKYKINWLNC---------LASFLD 140 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTIDPN-----------DSLIRFP 238 ++++ + GDFN + L +D I+ N DS F Sbjct: 141 EQEKKGELICLLGDFNVAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFE 200 Query: 239 KEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-RL 292 + L ID+ + + L D RG R Sbjct: 201 QNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSCVI--------DCSPRGYLRP 252 Query: 293 SDHCPISIDYDF 304 SDH P+ ID + Sbjct: 253 SDHAPVMIDLNL 264 >gi|146297800|ref|YP_001192391.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152218|gb|ABQ03072.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 269 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 98/308 (31%), Gaps = 57/308 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + FL+ + +Q + +SWN+ K+ + L AK + Sbjct: 5 TFYFLLFLLTSFQAFSQT-KFISWNLEN--------FGKSKYQ------ASLSFIAKTVQ 49 Query: 66 A-DIVFLQEM----GSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 DI+ +QE+ G AVAK+ + W S N K++ I Sbjct: 50 EYDIIAIQEVVAGYGGSQAVAKLASILNEKGSKWDYTISDPTSGNSYKKERYAFIWKTSK 109 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V+ K + ++ + + R E+N K + ++ H Sbjct: 110 VKLKGKPWLEKKYHLEID----------REPYFATFEVNKKLVTFVNFH---AITKSKQP 156 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 T L Q+ L V GDFN ++ N K + Sbjct: 157 ETEIKYFKFLPQEYPDLNL------------VFTGDFNCPESHTVFNP--LKKMGYVSVF 202 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + +C A L D N K + +S + YN D +++SD Sbjct: 203 QKQKTTLKQKCKAEVCLA--SEFDNIFYKSNTLKPI--KSGVVLFYNNYDSLQEARKISD 258 Query: 295 HCPISIDY 302 H PI ++ Sbjct: 259 HIPIWFEF 266 >gi|330960376|gb|EGH60636.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 261 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 86/256 (33%), Gaps = 45/256 (17%) Query: 57 LRQYAKNLDADIVFLQEM-GSYNAVAKVFPK----NTWCIF---YSTERLINHSKRDSNN 108 LR+ +++ ADIVFLQE+ G + A+ + + ++ + + Sbjct: 43 LREAVRSVSADIVFLQEVHGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDG 102 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 D A+ + + Q + + R +++ N ++ + +HL Sbjct: 103 DHGNALLSKYPII---QHENLDISIDGTEQRGLLHCILDV---PNAGRVHAVCVHL--GL 154 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 F QQ + L + + + P ++AGDFN ++ D + Sbjct: 155 FESHRR-----------QQLKLLAE-LMARLPEGEPVIVAGDFN---DWRQRADALLQGT 199 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + K+ ++P+ +D+ + + Sbjct: 200 G------LYEVFVEHFGAPAKSFPARLPL--LRLDRVYVRNSTSHRPKVLS------SRP 245 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 246 WSHLSDHAPLAVELTL 261 >gi|118592105|ref|ZP_01549499.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] gi|118435401|gb|EAV42048.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] Length = 323 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 92/296 (31%), Gaps = 54/296 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 ++L ++N+ S E R LR L+ADI+ LQE+ + Sbjct: 1 MKLATFNME--SFGEDRHDPDALTPR----LDALRPKILELEADILCLQEVNAQKIKGMA 54 Query: 78 ----NAVAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 A+ + + F+ S N + + + + ++P Sbjct: 55 ARQFQALDLLLEGTPYEGFHRATSERLSGKGPGDRHNLVVLSRFPITRFFSLYQTHAHPP 114 Query: 131 LGAKDSFSRAGN--------RRAVELLVEIN-GKKIWVLDIHLKS-------FCFLDSLE 174 + A + R +++ ++I G+ + V +HL++ + Sbjct: 115 QWQPKTAEPAYHGPQTILFDRPVLQVEIDIGTGRPLHVFCVHLRAPVAAMIRGGKGEDRT 174 Query: 175 NTYSPS------CSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNR-------KINY 217 + + S+L Q AQ L+ + + V+ GDFN ++ Sbjct: 175 WSSVSAWAEGYQLSVLKQTAQALELRLAVESLFDANENSHIVLVGDFNATGETGTLRLLR 234 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQ 272 +D + L + + + K +D+ + + I Sbjct: 235 ADPDDTGSPKLAG-RRLYQLDASLPAEKRQTVIHKGKGQALDHILASASMAHRTID 289 >gi|322821240|gb|EFZ27618.1| MP99, putative [Trypanosoma cruzi] Length = 915 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 41/215 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDA 66 ++P +R+++WN+ + + R D Y L + + LDA Sbjct: 616 VLPTPTEELSTLRVLTWNVQFNRHSG----ERTPLGRDGIDWCTPTRYIALAKTMETLDA 671 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D++ +QE+ WC + ++ + N D H A+R V +L Sbjct: 672 DVISMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH---AIRPWGVMLLV 717 Query: 126 QSYPLLGAKDSFSRAGNRRAV----ELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + A E+ + ++ + + +HL + N + S Sbjct: 718 KRHLRVEGMHHANVAAFAGHTSVMPEVTITVSKNVPVTIGSLHLLA------PYNKNNVS 771 Query: 181 CSLLSQQAQWLKDWITQK-KESLVPF--VIAGDFN 212 Q + L + + VP ++ GDFN Sbjct: 772 NRT--TQLENLTKRMRARPSAGGVPTGAIVMGDFN 804 >gi|84501585|ref|ZP_00999757.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] gi|84390206|gb|EAQ02765.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] Length = 336 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 104/341 (30%), Gaps = 65/341 (19%) Query: 24 VRLVSWNINT---LSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +RL S+NI L + +G L + V R + + +DAD V L E Sbjct: 1 MRLASYNIEWFDALFDDDGALLIDDRWSARRDVTRAEQA-RAIATVLRAVDADAVMLIEA 59 Query: 75 GS-------YNAV------------AKVFP---KNTWCIFYSTERLINHSKRDSNNDIHT 112 A+ V + I + + D Sbjct: 60 PDTSGRRSTVRALETFAASFDLRTRRAVIGFPNRTQQEIALLFDPETMAAHHDPGGRPDD 119 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A A R + FS+ V L G + +L +HLKS + Sbjct: 120 AEAPRFDGRFRIDLDVDASRDTVVFSKPPLELMVTL---PGGAALRLLGVHLKSKAPHGA 176 Query: 173 LENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 ++ ++ QA WL+ + + P ++ GD N L ++ + Sbjct: 177 RTRDEIMRLAIANRRKQLAQAIWLRRRVAGHLAAGEPLIVMGDLNDGPG-LDEYENLFGR 235 Query: 228 ------------------IDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQN--- 265 +D + +R + + R + +DY ++ + Sbjct: 236 SSVEIVLGDEAPRLYDPHVDQALAARLTAAPTTARFHIQPDDRYLQALLDYIMISPDLMS 295 Query: 266 -AYKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ I F + ++ ++ SDH P+ +D D Sbjct: 296 HNPRWRIWHPFDDPGCWSRPQLRDALITASDHFPVVLDIDL 336 >gi|190894773|ref|YP_001985066.1| putative metal-dependent hydrolase [Rhizobium etli CIAT 652] gi|190700434|gb|ACE94516.1| putative metal-dependent hydrolase protein [Rhizobium etli CIAT 652] Length = 242 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 46/258 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNND 109 D + ADIV LQE+ + + ++ + H + Sbjct: 24 DPGRIASVIAEAGADIVALQEVD---VLRRRTGGIDQAHLIASLLKMQAHFHPALSVAEE 80 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 81 QY-GDAIITALPTSAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL----- 128 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +LL+ W+ E +P V+ GDFN + +++ Sbjct: 129 GLRGRERIRQMTTLLN------SGWLRGAMEEPLPCVLCGDFN-ALPSSATYRLVARSLK 181 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + + ++ P +D+ + + L+ + + + ++ Sbjct: 182 D--------AQLGGKASPRATFPSRYPLMRLDHIFVTDD----LVVKRAAVLQNRLTNVA 229 Query: 287 SRGKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 230 ------SDHLPLFAEISF 241 >gi|333009779|gb|EGK29228.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-272] gi|333020444|gb|EGK39707.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri K-227] Length = 253 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAERTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|241113465|ref|YP_002973300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861673|gb|ACS59339.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 242 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 92/297 (30%), Gaps = 73/297 (24%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++++N+ L + +ADIV LQE+ + Sbjct: 4 QSIKILTYNV-HSCIGGDRKLDPG----------RIASVIAEAEADIVALQEVD---VLR 49 Query: 82 KVFPKNTWCIFYSTERLIN---HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ + H + + A+ ++ PL + Sbjct: 50 RRTGGVDQAHAIASLLKMQAHFHPALSIAEEQY-GDAIITSLPTGAVKAGPLPSIGEQ-- 106 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-DWITQ 197 R A+ + + + +K+ V++ HL L + Q L W+ Sbjct: 107 ----RGAISVEILVGNRKLLVVNTHL-------GLRGRER-----IRQMTTLLNPGWLRG 150 Query: 198 KKESLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + +P ++ GDFN ++ D + Sbjct: 151 TTDEPLPTILCGDFNAIPSSATYRLAARSLKD----------------AQLAGSAAPRAT 194 Query: 251 LRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ P +D+ + + LI + + + ++ +R SDH P+ + F Sbjct: 195 FPSRYPLMRLDHIFVTDD----LIVKQAAVL----ENRLTRIA--SDHLPLLAEIGF 241 >gi|149911488|ref|ZP_01900104.1| putative phospholipase C precursor [Moritella sp. PE36] gi|149805452|gb|EDM65460.1| putative phospholipase C precursor [Moritella sp. PE36] Length = 429 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 95/298 (31%), Gaps = 56/298 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A ++++S+N+ L + K+ R L+ Y D++ LQE+ Sbjct: 163 ADTLKVMSYNVWAL-----PVIAKHIGDRFQEIPKHLKGY------DVLMLQEV------ 205 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---------SYPLL 131 F L + + I V V ++ + YP Sbjct: 206 ---FASGRDAFL---RDLAKEYPYQTKMLDYPGINVYDGGVTIVSRYPIVNEGQYVYPDC 259 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D F+ G A + NGK V H S F Y +Q + + Sbjct: 260 SGTDCFADKGVNYAEVIK---NGKAYHVFATHTAS--FDTDTARDYR------QRQFRQM 308 Query: 192 KDWITQKKESLVPFVI-AGDFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 +D+ + + V+ GDFN + + + + + ++ ++ +S + Sbjct: 309 RDFAQAQNIPVTDTVVYGGDFNVNKLKFPTDYQQMFANLSADEP--QYAGYTESTFDPRI 366 Query: 250 NLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N N +DY V+ K + +I + LSDH P+ Sbjct: 367 NAYAGNALSGGENIEYLDYVVVSNEFAKRNENINTVKIPRTTVASLWKHWNLSDHFPV 424 >gi|332969618|gb|EGK08636.1| exodeoxyribonuclease III [Kingella kingae ATCC 23330] Length = 256 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 98/304 (32%), Gaps = 71/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N+L+ + + + D++ LQE Sbjct: 1 MNITTWNVNSLNVR----------------LPHVSNWLSQHQPDVLVLQE---LKLEQDK 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP ++ S + +A+ ++ Q+ D R Sbjct: 42 FPAAALQ-------MMGWQCAWSGQKTYNGVAIISRHAIEDVQTGLPALPDDPQRR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + V++++ + L+S + Y Q L W+ ++ + Sbjct: 91 -----VISATINGVRVINVYCVNGESLESDKFVYKR------QWFAALTQWVREQMQQYD 139 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-- 246 V+ GDFN +I+ +++T+ + + + Sbjct: 140 KLVLLGDFNIAPADDDVYDPEKWREQIHCSSEERAWFQTLLDLGLTDCLRQIHPTGVHYT 199 Query: 247 ----ANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K + ID+ + Q+ + S ++ + ++ +R SDH P+S Sbjct: 200 WFDYRGAMFQRKLGLRIDHILASQS-----LASSLHDVRVDLEE--RAQERPSDHAPVSA 252 Query: 301 DYDF 304 +D Sbjct: 253 WFDL 256 >gi|123968077|ref|YP_001008935.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] gi|123198187|gb|ABM69828.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] Length = 281 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 95/305 (31%), Gaps = 69/305 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N RT + + + + DI+ LQE KV Sbjct: 3 IATWNVN--------------SIRTR--LSQILDWINKSNPDILCLQE-------TKVVD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 N + +S + +A+ K + G D+ Sbjct: 40 DN---FPIEAFEKLGYSVEIYGQKSYNGVAIISKIKPENVKKG-FYGCNDTNQNIEIFLD 95 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWITQKKESL 202 + L+ + I ++++++ + LDS + Y +C L ++ +++ Sbjct: 96 QKRLISADINGIKIINVYVPNGSSLDSSKFEYKINWLNC---------LASFLDDQEKKG 146 Query: 203 VPFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPK---------EKDSRCN 246 + GDFN + L +D I+ + K E+++ Sbjct: 147 ALICLMGDFNVAPSNLDIHDPKKYEGGIMASEIERSALNNVLKKRLIDSFRIYEQNTGHW 206 Query: 247 ANKNLRNKIP-------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + RN ID+ + + L D R SDH P+ Sbjct: 207 SWWDYRNNAFELNKGWRIDHIYISKELSSKLKSCVI-------DSCPRGNLRPSDHAPVM 259 Query: 300 IDYDF 304 ID + Sbjct: 260 IDLNL 264 >gi|117622972|ref|YP_851885.1| metal-dependent hydrolase [Escherichia coli APEC O1] gi|115512096|gb|ABJ00171.1| Metal-dependent hydrolase [Escherichia coli APEC O1] Length = 253 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + DIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSTDIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|86159101|ref|YP_465886.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775612|gb|ABC82449.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] Length = 282 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 81/284 (28%), Gaps = 53/284 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 25 RVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAS------L 67 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVR---VLQQSYPLLGAKDSFSRA 140 P + RL + H A + + L R Sbjct: 68 PGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRG 127 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R V L ++ V HL + +LLS A L+D Sbjct: 128 CLRADVVL----GPMRVHVFAAHL-----GLHWRERRRQAAALLS--ADILRD-----AA 171 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+ GDFN + +T+ P L + +D Sbjct: 172 LSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLD-RAYVD-- 228 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A ++ R +R SDH P+ ++ + Sbjct: 229 -----AALRVVACEVVRTP--------RARRASDHLPLVVELEL 259 >gi|269218782|ref|ZP_06162636.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] gi|269211893|gb|EEZ78233.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] Length = 265 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 81/276 (29%), Gaps = 57/276 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + ++ + AD++ LQE+ + + + + + A+AV Sbjct: 19 MGEWIASAKADVLLLQEVRAPEELVAPLVGEGYKTIPWPCEIKGRAG--------VAVAV 70 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R+ + + G D L VE+ + V+ +L S DS Sbjct: 71 REGI----ETGAVVRGVGDDQPPVDT--GRWLEVELPELGLRVVSAYLHSG---DSSSKE 121 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RK-------- 214 + ++ + + E F++AGDFN Sbjct: 122 KMDA---KYAHLDLVEKRLAELSEGGGRFLVAGDFNIVHTPLDITNWKSNHNRTSGVLDE 178 Query: 215 -INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---ANKNLRNK--IPIDYFVMDQNAYK 268 I YL F + + P + K N IDY + + + Sbjct: 179 EIAYLDR--WFGQMGLADVQRRLDPDSQGPYTWWSQRGKAFDNNTGWRIDYHLASPSLAE 236 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y D S R SDH P+ +DY Sbjct: 237 KADA-------YRIDRAPSYDARFSDHAPLIVDYTL 265 >gi|260173227|ref|ZP_05759639.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] gi|315921500|ref|ZP_07917740.1| metallophosphoesterase [Bacteroides sp. D2] gi|313695375|gb|EFS32210.1| metallophosphoesterase [Bacteroides sp. D2] Length = 263 Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 68/258 (26%), Gaps = 48/258 (18%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNND 109 + L + K+ D V LQE+ S K P F S D Sbjct: 40 ASLEELAHHIKSFKPDFVALQEVDSKTD-RKRTPHQKGKDFISELAYHTGMFGLYGKTID 98 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 T + S + R +E L E+ I HL Sbjct: 99 YSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGLFEMGNDTIVFTSTHL----- 153 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---LGNNDDFWK 226 S ++Q +++ P ++ GDFN + G + F Sbjct: 154 -------DVNSQETRAEQIKFITGHFK---NYKYPVILGGDFNARHYSEVIRGMDSWFAA 203 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + D P K IDY +I + L Sbjct: 204 SNDDFGMPAWKPVIK---------------IDYLFAYPQKGWRVISTQTVQSL------- 241 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH PI + ++ Sbjct: 242 -----LSDHLPIITELEY 254 >gi|300691333|ref|YP_003752328.1| exodeoxyribonuclease III [Ralstonia solanacearum PSI07] gi|299078393|emb|CBJ51043.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum PSI07] Length = 269 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 93/318 (29%), Gaps = 91/318 (28%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK---KNVRVLQQS 127 E+ P + + + ++ + + +A+ RK R + ++ Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVKN 88 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + V ++ G + V+ + + LDS + Y + Sbjct: 89 IPGFADEQQRI-------VAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRW 135 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCN 246 L+DW+ + + ++ GDFN + +D W+ ++ R Sbjct: 136 LAALQDWLKAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALEGAG 195 Query: 247 ANKNLR-------------NKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDD 284 R ++ ID+ ++ + + D Sbjct: 196 LVDAFRMFDQADKLFSWWDYRLFAFKRNAGLRIDHILLSPDLARLCESCHI-------DR 248 Query: 285 IKSRGKRLSDHCPISIDY 302 + ++ SDH P+ Sbjct: 249 VPRGWEQPSDHTPVVAAL 266 >gi|116695065|ref|YP_840641.1| extracellular nuclease [Ralstonia eutropha H16] gi|113529564|emb|CAJ95911.1| extracellular nuclease [Ralstonia eutropha H16] Length = 600 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 95/321 (29%), Gaps = 54/321 (16%) Query: 21 AQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQ 72 A +R+ ++N+ + + R D L + L DAD++ + Sbjct: 288 ATTLRVAAFNLQNYFNGDGQGGGFDAPGNRGAQDAAALARQEARLLAALRGLDADVIGVM 347 Query: 73 EMGS-----YNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 E+ + Y+A+ ++ W + + + + AV Sbjct: 348 EVENDGYGQYSAIRQLATRLGPDWRVLDPGTPALGSNAIAVGLLYNARTAVPAGRTATTW 407 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDSLENTYSPS---C 181 LG + AG RA G + V+ H KS C + C Sbjct: 408 -----LGERSRQPLAGTFRAAA-----GGTPVTVVVNHFKSKTCTEATGAQADQGDGQGC 457 Query: 182 --SLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 Q AQ L +W+ + ++ GD +N D + + Sbjct: 458 WNPARVQAAQALAEWLGTTPTGVAGAGVLVIGD----LNSYAMEDPV-RVLARRGYADMV 512 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-------- 289 + + +D+ + D A + ++ I +E S Sbjct: 513 AEFAGKPAYSYVYNGQAGYLDHVLADAAAARHVMAVHAWHINADEPPAFSYAPAPGAPAV 572 Query: 290 --------KRLSDHCPISIDY 302 R SDH P+ +D+ Sbjct: 573 PGHYAPGPYRSSDHDPLVVDF 593 >gi|158338616|ref|YP_001519793.1| hypothetical protein AM1_5519 [Acaryochloris marina MBIC11017] gi|158308857|gb|ABW30474.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 316 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 72/297 (24%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 + +P + +R++S+NI DY ++Q + D DI+F Sbjct: 84 WLGLPSLGAQPSGLRVMSYNI-WTQ---------------NQDYGAIQQSIQQEDPDILF 127 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 L E+ + +A+ + + + S R SN A R + + YP Sbjct: 128 LTEI-TKSAMRDLENRLDY-------PYSQRSNRGSN-----AFFSRYPILSATPE-YP- 172 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + G ++ ++ + + V+ IH S + +QQ + Sbjct: 173 -----NVTEHGLTFSLVTQIQTPQEVLTVVGIH------PPIPLTRSSFAVR--NQQFER 219 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-- 248 L +I Q ++ GDFN ++ +L + + + Sbjct: 220 LAPFIQQV---PNRVIVLGDFN-----TSPWSPYFDQFLQEANLWSATRGQGIWATWSYE 271 Query: 249 ---KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + KIPID+ F + D + SDH P+ + Sbjct: 272 SSLPHWFAKIPIDHI----------TNRGFVCM-----DAWAGRANGSDHRPVIAEL 313 >gi|224367727|ref|YP_002601890.1| hypothetical protein HRM2_06120 [Desulfobacterium autotrophicum HRM2] gi|223690443|gb|ACN13726.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 251 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 84/266 (31%), Gaps = 54/266 (20%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 +RT + + + ++LD DIV L E+ + + N +++ Sbjct: 30 GYTRRTDRHFGSITDFIESLDPDIVGLIEVDGGS--RRSRGVNQ-----ASQLAGVLGHS 82 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR--AV-ELLVEINGKKIWVLD 161 +T K V Q L S+ V L++E+ V Sbjct: 83 FLFESKYTRPLFSKHLPIVRWQGNAFLSKNGILSQKFLYFDQGVKRLVMEVELDTCVVFL 142 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HL S++ + Q + L+ I P ++AGDFN + Sbjct: 143 VHL-------SIKYAHR------QNQLRELQVLIH---GQKKPVIVAGDFNSFLGQR--- 183 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEI 278 + K + + +++P +D+ + S I Sbjct: 184 --------ELAPFLEATSLKSANTGRLRTFPSRVPRMELDFIL-----------HSPEII 224 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + D+ RLSDH P+ D+ Sbjct: 225 I---HDLDVPRVRLSDHLPLICDFSL 247 >gi|78776910|ref|YP_393225.1| endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] gi|78497450|gb|ABB43990.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] Length = 334 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 43/221 (19%) Query: 8 ALVFFLVPCTASVAQKV-RLVSWNINTL--SEQEGVSLWKNSVKRTTS--------DYTL 56 L F L+ T+ + + ++ ++N+ L E G + T+ Sbjct: 3 ILFFTLLIYTSLFGETILKIATYNVENLFDLETSGYEYSEYIPNSTSEWNQKNYKIKLKN 62 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + Q K++DADI+ L+E+ S A+ + S + +IA Sbjct: 63 IAQVIKDIDADIIALEEVESLQAL------------LDLRFALKQSGLYYG---YYSIAD 107 Query: 117 RK----KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +K K + + + R +E INGK++++ H KS S Sbjct: 108 KKNTTVKVALLSKVPFVYSKEISVTQTYEYRNILETKFNINGKELYIFVNHWKS----KS 163 Query: 173 LENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + C+ L ++ + + ++ GDFN Sbjct: 164 GAESQRVLCAKSLMKRVKEIG--------FDKNIILLGDFN 196 >gi|28871801|ref|NP_794420.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855053|gb|AAO58115.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 363 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 100/337 (29%), Gaps = 65/337 (19%) Query: 11 FFLVPCTASV-------AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSD 53 C+ +V Q +++++WNI L+ + + + + Sbjct: 35 LLTASCSTAVQAPKLVPGQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTPEDLAYN 94 Query: 54 YTLLRQYAKNLDADIVFLQEMGS--------------YNAVAKVFPKNTWCIFYSTERLI 99 + + ++ DIV LQ + +A ++P +T ++ E + Sbjct: 95 LDEVARVIRDEQPDIVLLQGVDDGAKNSDYQDQQKLLQERLADLYPCSTQAFYWKAEFVP 154 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 + S T ++ R + P+ A + + A+ + +G K+ Sbjct: 155 SPHIWGSVGRKLTTLS-RFHIDSAERLQLPMPDANIISRQFQPKNALLVSYLPLRDGGKL 213 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----- 212 V++ HL + D S L +++ + P++I GDFN Sbjct: 214 AVINTHLATAKPGDGTAQKQIASTETL----------LSKLEGGGTPWLIGGDFNLLPLG 263 Query: 213 ----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 W+ P +S P D + Sbjct: 264 QYQRLPEQQRHGYAADSELHALWEK------YPMIPNNTESSGTDRSQWLTHFPNDNRIN 317 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + S S + + +SDH P+ Sbjct: 318 GPDRTVDYLFYSPSLKRVSARVRRDDTLLISDHLPVI 354 >gi|259416092|ref|ZP_05740012.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B] gi|259347531|gb|EEW59308.1| endonuclease/exonuclease/phosphatase [Silicibacter sp. TrichCH4B] Length = 333 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 109/340 (32%), Gaps = 69/340 (20%) Query: 24 VRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +RL ++NI L E S +R + + + +DAD + + E Sbjct: 1 MRLSTYNIEWFEALFDESDHLRLDEAPSARHEVSRRAQA--EAIADVLRAIDADGITIIE 58 Query: 74 ---MGSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 G + + + W + + ++ + ++ A ++ Sbjct: 59 GPNTGKRQSTVRALTRFAEWADLRTRDVVMGFA---NDTRQEIAFLFDSNVMQAEHAPIS 115 Query: 130 LLGAKDSFSRAGNRRAVE---------------LLVEINGKKIWVLDIHLKSFCFLDSLE 174 A + V+ ++ +G ++ HLKS + Sbjct: 116 SPRAPRFDATFEIDLDVDAKADMVRFSKPPMELMVTPADGMPFRLIGAHLKSKAPHGART 175 Query: 175 NTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI- 228 + + S+ ++ QA WL+ + E+ P V+ GD N G D ++ + Sbjct: 176 PEEARAISIANRRKQLAQAVWLRGRVEDHLEAGDPLVVMGDLN-----DGPGLDVYEALF 230 Query: 229 --------------DPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQ----N 265 DP+ + P ++ +A + +DY ++ + Sbjct: 231 GRSSVEIIMGAELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQAH 290 Query: 266 AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 K+ I F + Y + SDH P+++D F Sbjct: 291 QPKWRIWHPFEDAACYGTPTLCQALLTASDHFPVTLDLAF 330 >gi|320158549|ref|YP_004190927.1| hypothetical protein VVM_01457 [Vibrio vulnificus MO6-24/O] gi|319933861|gb|ADV88724.1| hypothetical protein VVMO6_03702 [Vibrio vulnificus MO6-24/O] Length = 322 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 71/334 (21%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 + + S N+ N L+ ++ S T +++ L + ++AD+V QE+ S + Sbjct: 2 ITIASCNLFNFLAPPGAY--YEFSNILTDNEWNKKTTWLTLQLRAINADVVAFQEVFSPD 59 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL------- 131 A+ + + F + + + + AIA R + + Sbjct: 60 ALNTLTSDLGYPYFVCLDT-PHVTDEFIYSKPVLAIASRWPVIESRLVRFKDCFGDYSEN 118 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKS------FCFLDSLENTYSPS---- 180 ++++ +R + ++E+ + V+ +HLKS + PS Sbjct: 119 SDSVTYNKEFSRLPLHAVIELPIIGLCDVITLHLKSQRPTRWQTQQIDQADNTPPSDPVG 178 Query: 181 --CSLLSQ--QAQWLKDWITQ-KKESLVPFVIAGDFNRKIN---------------YLGN 220 S + + +A L +I + P VI GDFN IN Sbjct: 179 SWLSTVQRGWEAVLLSQYIKKIYASHARPMVIMGDFNANINSTELKPLIDESNTPLLKDV 238 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCN-----------ANKNLRNKIPIDYFVMDQNAYKF 269 D + +D + S+ A +N + + I + V+ Sbjct: 239 RDWLREQPIFSDEAQKATHYHGSQGLILDYLLLSEEFAQQNAQQRGKITHLVVWDKH--- 295 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L+ SF + SDH +++ D Sbjct: 296 LVNPSFEVDQFA-----------SDHAFVAVTID 318 >gi|303328283|ref|ZP_07358721.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] gi|302861613|gb|EFL84549.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] Length = 268 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 89/317 (28%), Gaps = 85/317 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAV 80 +++LVSWN+N L W+ + DA IV LQE + Sbjct: 2 RIKLVSWNVNGLRALSAKPEWE---------------WFARTDAQIVALQETKAHPEQLK 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--------KKNVRVLQQSYPLLG 132 ++ W +S+ + + T +AVR + R+L +P Sbjct: 47 EELASPEGWEAHWSSSHVKKGYSGVAVFSRMTPLAVRAELPDPQWQGEGRLLHLEFPDFH 106 Query: 133 AKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + + G ++ NGK + K F L C Sbjct: 107 FFNGYFPNGG----AEELDENGKPTGRFKRVPYKMGFFEAFLNYA--EECR--------- 151 Query: 192 KDWITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIR 236 P V+ GDFN + +L F + Sbjct: 152 ---------KSKPIVVCGDFNIAHQAIDLARPKQNVKNTGFLPEERAFLDRFTAMGYVDT 202 Query: 237 FPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 F K + + K IDYF + + + +Y Sbjct: 203 FRKVHGDQPDQYSWWSYKTRAREKNIGWRIDYFFVSEELAPAVSDAWIENNVYG------ 256 Query: 288 RGKRLSDHCPISIDYDF 304 SDHCP+ ++ + Sbjct: 257 -----SDHCPVGLELEL 268 >gi|56476029|ref|YP_157618.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] gi|56312072|emb|CAI06717.1| Exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] Length = 253 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + L + R D++ LQE K Sbjct: 1 MKIATWNVNSLKVRLPHVLDWLAANR----------------PDVLCLQE---LKLEDKS 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + S + +A+ + + + P + A Sbjct: 42 FPSAE-------IEAAGYHAAFSGQKTYNGVAILSRSALAGIGHGIPGFDDEQKRVLAAT 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V ++ F + L + L +W+ ++ ++ Sbjct: 95 VNGVRVI----------------CGYFPNGQAVGSEKFAYKL-RWLAALTEWLREELKAH 137 Query: 203 VPFVIAGDFN----RKINYLGNNDDF------------WKTIDPNDSLIRFPKEKDSRCN 246 V+ GDFN + + D+ + D+ FP++ S Sbjct: 138 QRLVLTGDFNIAPEDRDAHPDWKDEIHVSPAERAAFAALTGLGLADAYRLFPQDDKSFSW 197 Query: 247 -----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ + D + +R SDH P+ + Sbjct: 198 WDYRMGAFRRNFGLRIDHILLSPALRDVCCACTI-------DKAPRKLERPSDHAPVIAE 250 Query: 302 YDF 304 + Sbjct: 251 LEL 253 >gi|319405904|emb|CBI79536.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 260 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 103/305 (33%), Gaps = 72/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V+WNI R L ++ K D+V LQE+ + + Sbjct: 1 MKIVTWNI------------AGIKARHE----TLCKWLKQNQPDVVCLQEI---KCIDEN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+NT + + +A+ L + P ++ Sbjct: 42 FPRNT-------IEDLGYHVETHGQKSFNGVAI-------LSKKIPDEIICRLPGDHNDK 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 +A + + N I V ++L + ++S + Y L A+ L E Sbjct: 88 QARYIEAVYSTNKGSIRVASLYLPNGNPINSEKYFYKTEWMKRLYTHAKSL-------LE 140 Query: 201 SLVPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEKDS 243 P ++AGD+N ++ + ++ I IR + S Sbjct: 141 YEEPLILAGDYNVIPTSLDAKNPQEWNNDALFLPQIREIFQCITHLGFYDAIRNVTDTPS 200 Query: 244 ----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 AN +N ID+ ++ A LI Y++ +++ + SDH PI Sbjct: 201 FSFWDFQANAWKKNNGIRIDHLLLSPEAADQLI------CAYSQTEVRGYQ-KPSDHIPI 253 Query: 299 SIDYD 303 ++ + Sbjct: 254 WVELN 258 >gi|308190072|ref|YP_003923003.1| hypothetical protein MFE_05240 [Mycoplasma fermentans JER] gi|307624814|gb|ADN69119.1| conserved hypothetical protein [Mycoplasma fermentans JER] Length = 647 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 100/345 (28%), Gaps = 83/345 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSY 77 K+R+ WNI L E T+ +Y L ++L+ D++ L E + Sbjct: 316 AKSKIRIGMWNILNLYE-------------TSEEYKKYGLASVIEHLNLDVIGLIENKTK 362 Query: 78 NAVAKV-------FPKNTWCIFYSTERLINHS------KRDSNNDIHTA--IAVRKKNVR 122 + K N W + S + N + + I+ IA+ K Sbjct: 363 ASAQKFCEYLKKFTGNNNWELIASDNTIHNPKLAPTSKQHECPAFIYKKDKIAIEKFING 422 Query: 123 VLQQSYPLLGAKDSFSRAGN---RRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENT 176 Y + R + + + + HL S S E+ Sbjct: 423 KEWLGYDNSTFVVNEENNNLGYVRPPMGVKFKTLGPIQNNFTFVIDHLDSPGAAKSGESK 482 Query: 177 YSPSCSLLSQQAQW----------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 S LLS+Q L DW Q+ + GD N K+ GN + Sbjct: 483 SS----LLSKQGAQEADEAYNLKNLMDWFDQQDGDNDDLIFMGDTNIKL---GNQSTAFN 535 Query: 227 TIDPN---DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------- 268 I + +L+ ++ S + + P D N Sbjct: 536 EILKDQYYKALLTDSEQHKSSLSNQTWGKYSEPYDKIFTRTNLKYENANFFPLYDIFKDN 595 Query: 269 -----------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + YN D K +SDH PI D Sbjct: 596 ILKDYQTIEEWKTYVDTIRKKTYNA-DFKYIFHAISDHSPIYFDL 639 >gi|218462948|ref|ZP_03503039.1| putative phosphatase protein [Rhizobium etli Kim 5] Length = 288 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 54/193 (27%) Query: 57 LRQYAKNLD-ADIVFLQEM----------GSYNAVAKVFPKNTW------CIFYSTER-- 97 L + A++L+ ADI+ LQE+ +A FP + W + ++ Sbjct: 20 LARIARSLERADIIALQEVTRGFSRNGFADMVAGIAAFFPDHFWVYGPACDLHVEADQGK 79 Query: 98 -LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 R ++ V + V ++ L ++ R A E ++ + G Sbjct: 80 SAPAPGTRFQFGNM-----VLSRWPIVSTRTLLLPRSRTLGKINPQRGATEAVITVPGGA 134 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-------------- 202 I V +HL + SP + +Q Q+L I + Sbjct: 135 IRVYSVHL----------DHVSPDERI--RQLQFLNAHINAFVQEGGSLTGAAEFDLPEP 182 Query: 203 ---VPFVIAGDFN 212 +VI GDFN Sbjct: 183 PLPEDYVIMGDFN 195 >gi|116051946|ref|YP_789211.1| extracellular nuclease [Pseudomonas aeruginosa UCBPP-PA14] gi|115587167|gb|ABJ13182.1| predicted extracellular nuclease [Pseudomonas aeruginosa UCBPP-PA14] Length = 780 Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 107/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 559 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR+ + F NR + + G+++ + HLKS C Sbjct: 560 YRGDKVRIYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ +I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRGAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 770 >gi|319782958|ref|YP_004142434.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168846|gb|ADV12384.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 370 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 122/371 (32%), Gaps = 92/371 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLL---RQYAKNLD---- 65 +RL ++N+ L + S ++N + RT ++Y +L R A++ D Sbjct: 2 SLRLATFNVENLMNRFDYSGYRNQLNEDRTLALFDIQSEAEYRMLEQARAIAQSDDTRQL 61 Query: 66 ---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ADI+ +QE+ + A+ + + R + + + I A+ + Sbjct: 62 TALAIAATRADIICMQEVDNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAVMM 121 Query: 117 RK--------------KNVRVLQQSY----PLLGAKDSFSRAG--NRRAVELLVEINGKK 156 R + V + + P L A + + R +E+ V + G Sbjct: 122 RNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELEALGNQANERIFRRDCLEIDVTVGGVP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + +H KS + + + + +AQ ++ I ++ + + I GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEERFGKDYAADKRWAICGDMN 241 Query: 213 RKINYLGNNDDFWKTIDP------NDSLIRFPKEKDSRCNANKNLRNKIP---------- 256 +Y ID +++L N R Sbjct: 242 ---DYRQRVKVAGDAIDGYRFEVVDEALSCINVLTAGGFCENVVERRPEMNRWSFYHTRG 298 Query: 257 --------IDYFVMDQN-------AYKFLIQES--FSEILYNEDDIKSR------GKRLS 293 +DY ++ + A +I+ + I ++ + S Sbjct: 299 PEERHLCQLDYILLSKGLAASNATAVPDIIRNGQPWRTIFPPGQEVDRFPRAGWDRPKAS 358 Query: 294 DHCPISIDYDF 304 DHCP++I D Sbjct: 359 DHCPVAITLDM 369 >gi|207742979|ref|YP_002259371.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] gi|206594376|emb|CAQ61303.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] Length = 269 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 93/318 (29%), Gaps = 91/318 (28%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK---KNVRVLQQS 127 E+ P + + + ++ + + +A+ RK R + ++ Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILARKAAMPEGRDVIKN 88 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + V ++ G + V+ + + LDS + Y + Sbjct: 89 IPGFADEQQRI-------VAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRW 135 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCN 246 L+DW+ + ++ ++ GDFN + +D W+ ++ R Sbjct: 136 LAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAG 195 Query: 247 ANKNLR-------------NKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDD 284 R ++ ID+ ++ + D Sbjct: 196 LVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DR 248 Query: 285 IKSRGKRLSDHCPISIDY 302 + ++ SDH P+ Sbjct: 249 VPRGWEQPSDHTPVVAAL 266 >gi|146282538|ref|YP_001172691.1| exonuclease III [Pseudomonas stutzeri A1501] gi|145570743|gb|ABP79849.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501] Length = 301 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 89/314 (28%), Gaps = 80/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L + D++ LQE + Sbjct: 32 MKIVSFNINGLRARPH----------------QLSAIIEKHQPDVIGLQETKVADEQFPQ 75 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + ++ + + +P G + Sbjct: 76 AEIEALGYHV------------HYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFI 123 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A + NG+ + V++ F + ++ L+ + Q+ Sbjct: 124 WGRFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFS 173 Query: 201 SLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDS 233 + GDFN R + + W D + Sbjct: 174 PDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRT 233 Query: 234 LIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ S + R + IDY + ++ + D Sbjct: 234 LNPEVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRA 286 Query: 289 GKRLSDHCPISIDY 302 ++ SDHCP+ I+ Sbjct: 287 MEKPSDHCPVWIEL 300 >gi|163753669|ref|ZP_02160792.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1] gi|161325883|gb|EDP97209.1| hypothetical protein KAOT1_18642 [Kordia algicida OT-1] Length = 320 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 91/324 (28%), Gaps = 61/324 (18%) Query: 25 RLVSWNINTL--SEQEGVSLWKN---------SVKRTTSDYTLLRQYAKNLDAD------ 67 + +N+ L +E + L + + KR L +L + Sbjct: 12 TIAFYNLENLFDTEDDKYVLDNDFLPESDRNWTPKRYDKKIYKLGSAISSLGPEDTKNAP 71 Query: 68 -IVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +V + E+ + + + + H I + +K++ Sbjct: 72 VLVGVAEVENKTVMQDLVDSKQLQEYNYDFV--------HYNSPDERGIDVGLLYQKEHF 123 Query: 122 RVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD-SLENTYSP 179 V+ +S P+L + +R R + + +N + I V H S Sbjct: 124 EVVHSESIPILIYNEEGNRDFTRDTLYVKGLLNNEPIHVFVNHWSSRRDGAAETAYKRIE 183 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + ++ ++ Q +E+ +I GDFN + T N Sbjct: 184 AAKTVREKINYI-----QTEENDPHIIIMGDFNDDPTSESIQNYLMDTDLYNPMEKLLTI 238 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEI------------------LY 280 K S D + N + + SF+ + Sbjct: 239 YKGS----LNYRGEWNLFDQIIFTTNFFDYKKGTHSFASAAIFDEHFLTQWKGKYKGNPF 294 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ I F Sbjct: 295 RTYAGRRYLGGYSDHFPVYIRLKF 318 >gi|295687845|ref|YP_003591538.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295429748|gb|ADG08920.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 259 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 65/270 (24%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSN 107 D + + D+V LQE+ A + + + + + + Sbjct: 22 DVERVAEVIAAERPDVVALQELDVRRARTRGVDQAHRLAELLKMSFHFHPAMAVEEELYG 81 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + I TA+ R+ + PL R A+ + VE+ G K+ +++ HL Sbjct: 82 DAILTAL----PERRIKAKGLPLY---RRVPGLEPRGALWIEVEVGGTKVQIINTHL--G 132 Query: 168 CFLDSLENTYSPSCSLLSQQAQWL--------KDWITQKKESLVPFVIAGDFNRKINYLG 219 +QA L W+ P V+ GDFN Sbjct: 133 LVPQEQ-----------KRQAAALLGPDWMGDDRWVA-------PGVVLGDFN-----AT 169 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANK-NLRNKI-----PIDYFVMDQNAYKFLIQE 273 ++ + + S ID+ + + ++ Sbjct: 170 PYSATYRMLR----TALRDAQAPSPAWPRPATATFPSSFPFMRIDHVFLTKGLETRGVRS 225 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +R + SDH P+ +D + Sbjct: 226 PY----------DARARIASDHLPLVVDLE 245 >gi|197123175|ref|YP_002135126.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] gi|196173024|gb|ACG73997.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] Length = 261 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 82/284 (28%), Gaps = 53/284 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+V+WN++ L D + + ++ AD+ LQE+G+ Sbjct: 4 RVVTWNVHGLRGAGRRP-----------DPERIARVLDDIGADVAGLQEVGAR------L 46 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVR---VLQQSYPLLGAKDSFSRA 140 P + RL + H A + + L R Sbjct: 47 PGADAHAAEALARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRG 106 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++L ++ V HL + +LLS A L+D Sbjct: 107 CLRADLDL----GPMRVHVFAAHL-----GLHWRERRRQAAALLS--ADILRD-----AA 150 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+ GDFN + +T+ P L + +D Sbjct: 151 LSHPLVLVGDFNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLD-RAYVD-- 207 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A + L E +R SDH P+ ++ + Sbjct: 208 ----AALRVLGCEVIRT---------PLARRASDHLPLVVELEL 238 >gi|269123760|ref|YP_003306337.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] gi|268315086|gb|ACZ01460.1| Endonuclease/exonuclease/phosphatase [Streptobacillus moniliformis DSM 12112] Length = 277 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 40/216 (18%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + + L F + A+ + + S+N L E D+ L + Sbjct: 2 RRIFKLFFLIFLSMNIWAEPILIASFNTLKLGEN-------------KKDWKSLAKIVSK 48 Query: 64 LDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI+ +QE+ + + + F W S + + H + R Sbjct: 49 F--DIIAMQEVMNEKGINNLRNEVEKFTNEKWGYIISDMAVG-----TKDYKEHYGVLFR 101 Query: 118 KKNVRVLQQSYPLLGA-KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +K V S +G KD S+ R +L+ N ++ H F + Sbjct: 102 RKKV----DSIKSMGIYKDGKSKDFIRDPFGVLIRSNNFDFVLISAH---SIFGKNKVER 154 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + + K + ++ GDFN Sbjct: 155 EIEASRYHK-----VYKYFMDKSKE-EDVILLGDFN 184 >gi|260170561|ref|ZP_05756973.1| hypothetical protein BacD2_01735 [Bacteroides sp. D2] gi|315918907|ref|ZP_07915147.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692782|gb|EFS29617.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 366 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 97/320 (30%), Gaps = 92/320 (28%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +V A + + ++N++ + ++ K + Y +NL ADI+ Q Sbjct: 99 MVKMNAYTPGILTVATYNVDAFNHEDTGYSCKE-----------IASYMRNLQADILCFQ 147 Query: 73 E--------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 E + S AV + + I S K + + ++++N+ V Sbjct: 148 EFGINDEFGVDSIAAV--LSDWPYYFIPIS-----PEGKHLLQLAVFSRYPIKEENLIV- 199 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLDS 172 YP + +E NG+ I + + HL++ D Sbjct: 200 ---YPDSKNCSLWCD----------IETNGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDD 246 Query: 173 LENTYSPSC----------SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYL 218 + + + QA LK I S P ++ GDFN + + Sbjct: 247 SQRVERAAVGLIDGLHENFRKRAAQANTLKQLI---AASPYPTIVCGDFNSLPSSYVYHT 303 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + + K ++ + IDY L + Sbjct: 304 VKGDKLQDGFQTSGHGYMYT---------FKFFKHLLRIDYI---------LHSPELNST 345 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 Y D+ SDH P+ Sbjct: 346 DYFSPDLTY-----SDHNPV 360 >gi|66046507|ref|YP_236348.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63257214|gb|AAY38310.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 261 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 87/254 (34%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ +V + + S + + D Sbjct: 43 LREAVRTVSADIVFLQEVHGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +++ + ++ + +HL Sbjct: 103 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILDV---PHAGRVHAICVHL------ 152 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 153 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRQRAD---ASLQG 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 199 SGLHEVFVERFGA---PAKSFPARWPL--LCLDRIYVRNATSHRPKVLS------SRPWS 247 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 248 HLSDHAPLAVELTL 261 >gi|21241443|ref|NP_641025.1| hypothetical protein XAC0672 [Xanthomonas axonopodis pv. citri str. 306] gi|21106782|gb|AAM35561.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 287 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 100/319 (31%), Gaps = 57/319 (17%) Query: 3 RKYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 + L + C A A +R++S+N+ V + KR Sbjct: 7 QVLRCLLAIGALSCIALPALAGTPVAPLRVMSFNVR-------VPADTDGDKRWQVRRAA 59 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + K D+ QE+ S A + R +R ++D H + Sbjct: 60 MVALIKQTHPDVFGTQELVSEQAAFLAEQLPDY-------RWFGQGRRGDDSDEHMGVFY 112 Query: 117 RKKNVRVLQ------QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFC 168 + + V++ P ++ R A L E + ++ ++ + H Sbjct: 113 DARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWALFERRSDKRRFYLFNTHFP--- 169 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFW 225 + D E S L+ + L I P V+ GDFN KI Y Sbjct: 170 YRDEDEPARERSARLILSRIAQLPATI--------PVVLTGDFNSDPDKITYP------- 214 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +L ++ ++ + N D+ +++ + D Sbjct: 215 -------TLTAVLRDARAQASKRSGPEN-TFQDFTTHPTRRIDWILYRGLRPSRFATLDD 266 Query: 286 KSRGKRLSDHCPISIDYDF 304 + G SDH P+ ++++ Sbjct: 267 RPGGILPSDHYPVMAEFEW 285 >gi|325983079|ref|YP_004295481.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325532598|gb|ADZ27319.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 250 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 22/162 (13%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVA-KVFP--KNTWCIFYSTERLINHSKRDSN---NDI 110 ++ + +++DADIVFLQE+ ++ + F NT + +++ +H N N Sbjct: 29 IKNFLRHIDADIVFLQEVHGERRISNQRFDNWPNTQQFEFLADQVWHHYAYGKNAIYNSG 88 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K + + S SR+ + + +KI ++ IH F Sbjct: 89 HHGNAILSKYPIIEW-DNINVSMLRSASRSLLHG--VISIPETNQKIHIICIHF--GLFG 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q L I+ + P +IAGDFN Sbjct: 144 HER-----------KRQLSALVKRISTHVSASEPLIIAGDFN 174 >gi|330993300|ref|ZP_08317236.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] gi|329759702|gb|EGG76210.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 88/303 (29%), Gaps = 72/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LV+WN+N + +R + Y D++ LQE+ + Sbjct: 2 MKLVTWNVN------------SIRQRCD----HVLDYLAREQPDVLALQEI---KCATDL 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + R + + +A+ + ++ L ++ Sbjct: 43 FPADAF-------RKAGYECTAVGQKSYNGVAMLARQPFT--VTHTALPGWETTPPQ--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + + G + V +++L + S + + L ++ Sbjct: 91 -ARYVEIRTGG--LVVGNLYLPNGNSGGSAGYDSKLAF------MEALALHARGLLQAGQ 141 Query: 204 PFVIAGDFN--------------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 FV+ GD+N R + W + P + Sbjct: 142 DFVLMGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLLWLGLTDALRA-LHPAGRFY 200 Query: 244 RCN---ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A R+ ID+ ++ + L + + + SDH P++ Sbjct: 201 TFWDYQAAAWQRDSGLRIDHALLSPRVAERL-------LTALPARDERGKPQPSDHVPLA 253 Query: 300 IDY 302 I Sbjct: 254 ITL 256 >gi|304391804|ref|ZP_07373746.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] gi|303296033|gb|EFL90391.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] Length = 265 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 92/304 (30%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWNIN R L+ + DIV LQE+ S + + Sbjct: 1 MKIASWNIN------------GIKARHDVLIEWLK----QAEPDIVGLQEIKSVD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP S + ++ + +A+ + L + R Sbjct: 42 FPA-------SEIEALGYNVQTHGQKGFNGVALLSRLPFDEVNRGLPLLRESEDEDEQAR 94 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + I GK + V+ ++L + +D + L W + Sbjct: 95 F-IEGVFSIEGKSLRVVSLYLPNGNPVDDPRKFDYK-----LRWMDRLHAWAADRLALEE 148 Query: 204 PFVIAGDFNRKINYLGNND------DFWKTIDPNDSLIR--------FPKEKDSRCNANK 249 P ++AGD+N ND + +++ R F + S NA+ Sbjct: 149 PLILAGDYN---VIPQPNDCWNPKVWEGDALFRDETRSRFEALKNLGFTEALRSSANADG 205 Query: 250 NLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ +M A D ++ SDH P Sbjct: 206 IYTFWDYQAGAWPKNHGIRIDHLLMSAEAADMFNGCGI-------DSFVRDWEKPSDHVP 258 Query: 298 ISID 301 I ++ Sbjct: 259 IWLE 262 >gi|224177590|gb|ACN38810.1| MIP06315p [Drosophila melanogaster] Length = 441 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 16 CTASV-AQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 C+A V +RL+ WNI TL + V + ++ Y ++++ +N D++ Sbjct: 101 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQN-QPDVIC 159 Query: 71 LQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + V + IF+ +N AI ++ +++ Sbjct: 160 LQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTR 219 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQ 187 +L S A L + +G++ V HLK+ L L N +Q Sbjct: 220 ILEVWRVQSNQVA-IAARLRMRSSGREFCVATTHLKARHGALLAKLRN----------EQ 268 Query: 188 AQWLKDWITQKKESLVPFVIAGDFN 212 + L ++ Q P ++ GDFN Sbjct: 269 GRDLIRFVKQ-FAGDTPLLLCGDFN 292 >gi|161078191|ref|NP_001097746.1| curled, isoform D [Drosophila melanogaster] gi|158030219|gb|ABW08640.1| curled, isoform D [Drosophila melanogaster] Length = 642 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 16 CTASV-AQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 C+A V +RL+ WNI TL + V + ++ Y ++++ +N D++ Sbjct: 302 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQN-QPDVIC 360 Query: 71 LQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + V + IF+ +N AI ++ +++ Sbjct: 361 LQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTR 420 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQ 187 +L S A L + +G++ V HLK+ L L N +Q Sbjct: 421 ILEVWRVQSNQVA-IAARLRMRSSGREFCVATTHLKARHGALLAKLRN----------EQ 469 Query: 188 AQWLKDWITQKKESLVPFVIAGDFN 212 + L ++ Q P ++ GDFN Sbjct: 470 GRDLIRFVKQ-FAGDTPLLLCGDFN 493 >gi|51092216|gb|AAT94521.1| GH03334p [Drosophila melanogaster] Length = 526 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 16 CTASV-AQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 C+A V +RL+ WNI TL + V + ++ Y ++++ +N D++ Sbjct: 186 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQN-QPDVIC 244 Query: 71 LQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + V + IF+ +N AI ++ +++ Sbjct: 245 LQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTR 304 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQ 187 +L S A L + +G++ V HLK+ L L N +Q Sbjct: 305 ILEVWRVQSNQVA-IAARLRMRSSGREFCVATTHLKARHGALLAKLRN----------EQ 353 Query: 188 AQWLKDWITQKKESLVPFVIAGDFN 212 + L ++ Q P ++ GDFN Sbjct: 354 GRDLIRFVKQ-FAGDTPLLLCGDFN 377 >gi|161078189|ref|NP_001097745.1| curled, isoform C [Drosophila melanogaster] gi|21654879|gb|AAK85704.1| nocturin [Drosophila melanogaster] gi|158030218|gb|ABW08639.1| curled, isoform C [Drosophila melanogaster] Length = 449 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 16 CTASV-AQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 C+A V +RL+ WNI TL + V + ++ Y ++++ +N D++ Sbjct: 109 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQN-QPDVIC 167 Query: 71 LQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + V + IF+ +N AI ++ +++ Sbjct: 168 LQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTR 227 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQ 187 +L S A L + +G++ V HLK+ L L N +Q Sbjct: 228 ILEVWRVQSNQVA-IAARLRMRSSGREFCVATTHLKARHGALLAKLRN----------EQ 276 Query: 188 AQWLKDWITQKKESLVPFVIAGDFN 212 + L ++ Q P ++ GDFN Sbjct: 277 GRDLIRFVKQ-FAGDTPLLLCGDFN 300 >gi|161078193|ref|NP_001097747.1| curled, isoform E [Drosophila melanogaster] gi|73853348|gb|AAZ86746.1| RE65127p [Drosophila melanogaster] gi|108383940|gb|ABF85759.1| IP15605p [Drosophila melanogaster] gi|158030220|gb|ABW08641.1| curled, isoform E [Drosophila melanogaster] Length = 446 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 21/205 (10%) Query: 16 CTASV-AQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 C+A V +RL+ WNI TL + V + ++ Y ++++ +N D++ Sbjct: 106 CSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQN-QPDVIC 164 Query: 71 LQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE+ + + V + IF+ +N AI ++ +++ Sbjct: 165 LQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTR 224 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQ 187 +L S A L + +G++ V HLK+ L L N +Q Sbjct: 225 ILEVWRVQSNQVA-IAARLRMRSSGREFCVATTHLKARHGALLAKLRN----------EQ 273 Query: 188 AQWLKDWITQKKESLVPFVIAGDFN 212 + L ++ Q P ++ GDFN Sbjct: 274 GRDLIRFVKQ-FAGDTPLLLCGDFN 297 >gi|159903026|ref|YP_001550370.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] gi|159888202|gb|ABX08416.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] Length = 277 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 102/304 (33%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + +WN+N RT + + + ++ D++ LQE + + K+ Sbjct: 3 IATWNVN--------------SIRTR--ISQVEAFLSEVNPDLLCLQETKVEDASFPTKI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + + + ++ N S + + VR L + P D R Sbjct: 47 FEDKDYHLSFFGQKAYNGVALISKSPLKD---VRFGMSGELS-NNPEAQYLDEQKR---- 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ + ++++++ + L S + Y Q LK+++ + E Sbjct: 99 -----VISTLLNGVRIINVYVPNGSSLTSDKYEYK------LQWLNCLKNYLDCQSERDE 147 Query: 204 PFVIAGDFN--------RK--------INYLGNNDDFWKTIDP--NDSLIRFPKEKDSRC 245 P + GDFN + K + D F + + Sbjct: 148 PICLLGDFNIALEDKDIHNPNRLSGGIMASEPERKALRKLLGERLEDIFRIFEQGTNHWS 207 Query: 246 N----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + R++ ID+ + K LI S S +++ + + SDH P+ + Sbjct: 208 WWDYRSGAWDRDRGWRIDHIYLS----KELINHSKSCVIHKKS---RGNIKPSDHAPVLV 260 Query: 301 DYDF 304 + D+ Sbjct: 261 EIDW 264 >gi|289766976|ref|ZP_06526354.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289697175|gb|EFD64604.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 294 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 81/275 (29%), Gaps = 58/275 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNA 79 R+++WN+ S+ A + ++ +QE + Sbjct: 63 RVMTWNL--------------CNPCDASNLDRAADIAAH-APQVIGMQEACARDVDRIRD 107 Query: 80 VAKVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + F + + + + R AI + YP G++ Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQ--AILSAAPITDAVNVEYPDGGSE 165 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R + + E+ G+ + V + HL Q + L Sbjct: 166 D-------RGYLAVTTEVGGRSVRVFNTHL---------AQRRQEEFRT--DQVRVLAKE 207 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + + + ++ GDFN + D W ++ + P C + + Sbjct: 208 VARHERA----IVVGDFN-AVPEASELDPMW-SLATDTDPQCHPA-PGGTCEPTTDWQ-- 258 Query: 255 IPIDYFVMDQNAYKF----LIQESFSEILYNEDDI 285 DY + A + S ++LY + D+ Sbjct: 259 SKFDYVFLRGVAPREHRVVRTAHSDHDLLYADLDV 293 >gi|256783093|ref|ZP_05521524.1| hypothetical protein SlivT_01240 [Streptomyces lividans TK24] Length = 288 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 81/275 (29%), Gaps = 58/275 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNA 79 R+++WN+ S+ A + ++ +QE + Sbjct: 57 RVMTWNL--------------CNPCDASNLDRAADIAAH-APQVIGMQEACARDVDRIRD 101 Query: 80 VAKVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + F + + + + R AI + YP G++ Sbjct: 102 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQ--AILSAAPITDAVNVEYPDGGSE 159 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R + + E+ G+ + V + HL Q + L Sbjct: 160 D-------RGYLAVTTEVGGRSVRVFNTHL---------AQRRQEEFRT--DQVRVLAKE 201 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + + + ++ GDFN + D W ++ + P C + + Sbjct: 202 VARHERA----IVVGDFN-AVPEASELDPMW-SLATDTDPQCHPA-PGGTCEPTTDWQ-- 252 Query: 255 IPIDYFVMDQNAYKF----LIQESFSEILYNEDDI 285 DY + A + S ++LY + D+ Sbjct: 253 SKFDYVFLRGVAPREHRVVRTAHSDHDLLYADLDV 287 >gi|288962170|ref|YP_003452465.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] gi|288914436|dbj|BAI75921.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] Length = 333 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 32/164 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------- 77 R+ ++N+ TL + + LR + L+ADI+ LQE+ + Sbjct: 7 RIATFNLETLDDDADDPPF-------EERIATLRPQLERLEADILCLQEIDAQHPVKSAP 59 Query: 78 ---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK------------KNVR 122 A+A++ + ++ T N I + +R + Sbjct: 60 RILRALARLLDGTRYAGYHVTAGDAPSPADRHNPVIVSRWPIRAARLLRHHLVPPVRVRL 119 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 P + + R +E+ +G+ + V ++HL++ Sbjct: 120 ATADPAPDTETEVGWDRPVLHAELEM---PDGRVLHVFNLHLRA 160 >gi|114704450|ref|ZP_01437358.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] gi|114539235|gb|EAU42355.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] Length = 248 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 92/295 (31%), Gaps = 56/295 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFL 71 + + +R+VSWNI + + RT ++ + DI+ L Sbjct: 1 MSLPSVRPPGTLRIVSWNI-----HGAIGRRRRPNPERTIAEIERMA-------PDILIL 48 Query: 72 QEMGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 QE+ + + + + + TA +L +P Sbjct: 49 QEVDGRTMFGRAAGAFEYVTGALWERLPRETEERASHIVEARTADWPSDDIGNLLWSRFP 108 Query: 130 LLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + ++ NR+ +E +VE+ G+++ VL HL L T + Sbjct: 109 VSSSRIIDLPGPDIENRKVIEAIVELGGRRLRVLGTHL------ALLPTTRLKQARTIVD 162 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + +P V+ GD +N N T+ R PK R Sbjct: 163 HLTGID---------HLPTVLGGD----LNEWFPNGWVHSTLS-----CRLPKVHAPRTW 204 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + P+D F Q+ ++ +R SDH ISID Sbjct: 205 PERVPI--APLDRFYASQDV--EIVARG----------TDARAGVASDHRAISID 245 >gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 788 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAVEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] Length = 788 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAVEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|5802873|gb|AAD51807.1|AF172851_1 unknown [Chromobacterium violaceum] Length = 542 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 87/283 (30%), Gaps = 34/283 (12%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 R + A + A+ + ++L +WN L + + ++R L A Sbjct: 5 RFLLCAALSLPAASHAAYPEDLKLATWNAMLL--PQALYPNYGQMRRVE-----LMAAAP 57 Query: 63 NLDA-DIVFLQEMGSYNAVAKV-------FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L A D++ QE+ A K+ FP T I + + + + Sbjct: 58 ILQAQDVLVFQELQDNAASDKLLALLRPRFPYQTPVIGRAQQGWDGTEGWNGMKPEDGGV 117 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK---SFCFLD 171 A+ + V ++ Y S+ + + +NG+ V+ HL+ S C Sbjct: 118 AIASRWPIVEKRQYLFQTPGCSWDGQALKGFAYARIAVNGQFYHVIGTHLQSEDSGCANH 177 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKK-ESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + Q + + W+ + ++AGD N + Sbjct: 178 ADIGVRQA-------QLREIAAWVQSRHLPVEETVIVAGDMNIDRYKSAEYRAMLDILQA 230 Query: 231 NDSLIR-FPKEKDSRCNANKNLRN-------KIPIDYFVMDQN 265 + P D+ N R +DY + + Sbjct: 231 GEPRYAGMPHSFDTAGNGIALERYGARGGDAPEYLDYILTAER 273 >gi|213962631|ref|ZP_03390892.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] gi|213954626|gb|EEB65947.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] Length = 274 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 97/307 (31%), Gaps = 47/307 (15%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L + +VAQ + ++++NI + +GV+ W R +T++ + D Sbjct: 4 LLFILCILPALTVAQNLSVMTYNIRYDNSYDGVNSWTE-GNRKEKVFTIIND----ANPD 58 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I +QE A F + F S +R H+AI +K +L + Sbjct: 59 IFGVQE---ALAHQLKFLEER---FPSYQREGVGRDDGKEAGEHSAIFFKKNRFVLLDKG 112 Query: 128 Y------PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 P + + + NR + ++ WV ++H F + S Sbjct: 113 NFWLSQTPDVPSLGWDAICCNRICSWVKLKDKKTIFWVFNLH-----FDHEGKVAQIQS- 166 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 A + I + ++ ++ GDFN + K P K Sbjct: 167 ------ADLVLRKIKEIAKNGK-VILMGDFN----LPTEHPAVQKIASQLYDTQLSPTNK 215 Query: 242 DSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + P ID+ + Q+S Y + + SDH P Sbjct: 216 TPNMGTFNAFKTDEPLKGHIDFIFV---------QKSIKVKQYKIIETRIDSLYPSDHLP 266 Query: 298 ISIDYDF 304 + + Sbjct: 267 VWVQLQL 273 >gi|170733178|ref|YP_001765125.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169816420|gb|ACA91003.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 284 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 113/309 (36%), Gaps = 56/309 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +G + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGGV----DLPRTVAAIRRLGDF------DVLCLQELTRGFDALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + I + + + D+ AIA R RVL+Q P Sbjct: 51 RPGPDQFTELAALLPG--YTIVDAIGADLPPIRPDAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSL 183 D+ + + R A+++ ++ + V+ HL+ + +D+L + + +C+ Sbjct: 109 WPA--DAGTPSMPRVALDIELQAPFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAH 166 Query: 184 LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + Q + + P ++ GDFN ++D + + ++P F Sbjct: 167 -ADQPAPAETPEGPFSATGQPRDAIVCGDFN----SAFDSDAYRRFVEPIADAPSFVDAW 221 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRLS 293 +R + I + ++ + ++ D + R R S Sbjct: 222 IAR-HPGHTPPPTAGIY------DTAQWSDGPLACDFVFVTDTLLPRVIGCEIDGDVRAS 274 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 275 DHQPVLLEL 283 >gi|37993804|gb|AAR06978.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 30/235 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + ++ D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTSEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + I V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFIHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVP 250 >gi|16759734|ref|NP_455351.1| hypothetical protein STY0848 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142493|ref|NP_805835.1| hypothetical protein t2075 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161219|ref|ZP_03346929.1| hypothetical protein Salmoneentericaenterica_14750 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213586700|ref|ZP_03368526.1| hypothetical protein SentesTyph_37640 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647750|ref|ZP_03377803.1| hypothetical protein SentesTy_10972 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855118|ref|ZP_03383358.1| hypothetical protein SentesT_13982 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825286|ref|ZP_06544565.1| hypothetical protein Salmonellentericaenterica_07871 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25353375|pir||AB0599 conserved hypothetical protein ybhP [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502027|emb|CAD05260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138124|gb|AAO69695.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 252 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 85/258 (32%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + + + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRGVSVGGSEK-------RGVLYCRITPPMLNRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L ++ + Q L W+ P ++AGDFN D K Sbjct: 144 -----GLRESHRQA------QLTMLAGWVNAL-PESEPVLVAGDFN---------DWRQK 182 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P ++ + + +P+ +D+ K S + Sbjct: 183 AGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYVKNANASSPGALP------L 234 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 RNWRHLSDHAPLSAEIHL 252 >gi|21225866|ref|NP_631645.1| hypothetical protein SCO7604 [Streptomyces coelicolor A3(2)] gi|11322393|emb|CAC16706.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 294 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 82/275 (29%), Gaps = 58/275 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNA 79 R+++WN+ S+ + A + ++ +QE + Sbjct: 63 RVMTWNL--------------CNPCDASNLDRAAEIAAH-APQVIGMQEACARDVDRIRD 107 Query: 80 VAKVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + F + + + + R AI + YP G++ Sbjct: 108 YLEAFHGLVYHVAHGSVLQNWSRCGGAPWNPGGFGQ--AILSAAPITDAVNVEYPDGGSE 165 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R + + E+ G+ + V + HL Q + L Sbjct: 166 D-------RGYLAVTTEVGGRSVRVFNTHL---------AQRRQEEFRT--DQVRVLAKE 207 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + + + ++ GDFN + D W ++ + P C + + Sbjct: 208 VARHERA----IVVGDFN-AVPEASELDPMW-SLATDTDPQCHPA-PGGTCEPTTDWQ-- 258 Query: 255 IPIDYFVMDQNAYKF----LIQESFSEILYNEDDI 285 DY + A + S ++LY + D+ Sbjct: 259 SKFDYVFLRGVAPREHRVVRTAHSDHDLLYADLDV 293 >gi|90423996|ref|YP_532366.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] gi|90106010|gb|ABD88047.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] Length = 267 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 105/306 (34%), Gaps = 69/306 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN+N + +R L + K+ DIV LQE+ V + Sbjct: 4 PMRIATWNVN------------SVRQR----LDHLLVWLKDCAPDIVCLQEI---KCVDE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + ++ +A+ K L+++ P L D A Sbjct: 45 AFPR-------EAIEALGYNVVTHGQKTFNGVALLSKYP--LEEATPRLAGDDDDLHARF 95 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V V + + V ++L + ++ + Y L ++ L D+ ++ ++ Sbjct: 96 IEGV---VSLKSGVVRVACLYLPNGNPPETEKYAYK-----LKWMSRLL-DYAKERLKTE 146 Query: 203 VPFVIAGDFNRKINYLGN--------NDDFWKTIDPND----------SLIRFPKEKDSR 244 P ++AGDFN I G+ D +K +R + S+ Sbjct: 147 EPLILAGDFN-VIPAPGDVYNPAAWVGDALFKPQTRESFQALLGLGLSDALRAVTDAPSQ 205 Query: 245 C-----NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 206 YTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DKHVRSWEKPSDHVPV 258 Query: 299 SIDYDF 304 ID D Sbjct: 259 WIDLDL 264 >gi|260784913|ref|XP_002587508.1| hypothetical protein BRAFLDRAFT_61294 [Branchiostoma floridae] gi|229272656|gb|EEN43519.1| hypothetical protein BRAFLDRAFT_61294 [Branchiostoma floridae] Length = 559 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 101/298 (33%), Gaps = 45/298 (15%) Query: 39 GVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL 98 G+ + + D + Q D + LQE+ A ++ + Y + Sbjct: 268 GLDARPDPPHQPRPDVSHDIQVVFPYQLDFLCLQEVFDKRAGDRLARQLHRWFGYVVRDV 327 Query: 99 INHSKRDSNNDIHTA--IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK 156 NHS + +++ A R + V + +P ++ + G A +L+ ++ Sbjct: 328 GNHSLTRNCFVLNSGLFFASRYPILDVAFKHFPEKAKEEYLACKGLLMAK-VLLGTTKEQ 386 Query: 157 IWVL----DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE----SLVPFVI 207 ++ + HL++ D + QQ + W+ + +++ + P ++ Sbjct: 387 QRIVGYVANTHLQATEGDDQVR----------LQQLSHIPTWLEEFRQDTWQVNDPPDLV 436 Query: 208 A-----GDFNRKINYLGNNDDFW------------KTIDPNDSLIRFPKEKDSRCNANKN 250 GDFN N ++ D W +T D +RC A Sbjct: 437 MFDLLCGDFNFN-NLRSDHRDLWSHPLFDLYTDPCRTAPGEDKPWTVGSCVTTRCAACTC 495 Query: 251 LRNKIPIDYFVMDQNAYKFLIQE----SFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303 K + + N + + + E+ + + L+DH P+S+ + Sbjct: 496 TMTKQTLTKILRSSNKRQQFVASHLLSGVVGLRKPEEVMFTTQLAALTDHVPVSLRFS 553 >gi|156095775|ref|XP_001613922.1| sphingomyelin phosphodiesterase [Plasmodium vivax SaI-1] gi|148802796|gb|EDL44195.1| sphingomyelin phosphodiesterase, putative [Plasmodium vivax] Length = 753 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 41/187 (21%) Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ---- 197 + A+ L +N K + V+ HL++ + + +C +Q L +W+ Sbjct: 538 TKGAIYLKCCVNNKPVNVIATHLQAG------DTSDQQNCR--WKQLNELSNWVYNGAPS 589 Query: 198 -KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN------ 250 + P GDFN + + + F+ + + L +K + Sbjct: 590 FHIKKNEPLFFVGDFNIRYHL---DKSFFDRVLSSGCLNSSVTKKALETTYDSYLNDYCM 646 Query: 251 -------LRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIK-----------SRGKR 291 + +DY +++ ++ K L+ ++ + Y I + Sbjct: 647 HMERDYSFKYNYTLDYILVNNDSDVKTLVPQTAIQKDYRPIQIIKSLLGFIPYKCTYIHH 706 Query: 292 LSDHCPI 298 SDH PI Sbjct: 707 PSDHFPI 713 >gi|71660781|ref|XP_822104.1| MP99 [Trypanosoma cruzi strain CL Brener] gi|49096010|gb|AAR10848.2| MP99 [Trypanosoma cruzi] gi|70887497|gb|EAO00253.1| MP99, putative [Trypanosoma cruzi] Length = 914 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 41/215 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDA 66 ++P +R+++WN+ + + R D Y L + + LDA Sbjct: 615 VLPTPTEELSTLRVLTWNVQFNRHSG----ERTPLGRDGIDWCTPTRYIALAKTMETLDA 670 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D++ +QE+ WC + ++ + N D H A+R V +L Sbjct: 671 DVISMQEVE-----------PAWCKYLCEQQWVRERYALSCNEDSH---AIRPWGVMLLV 716 Query: 126 QSYPLLGAKDSFSRAGNRRAV----ELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPS 180 + + + + A E+ + ++ + + +HL + N + S Sbjct: 717 KRHLRVEGMHHANVAAFAGHTSVMPEVTITVSKNVPVTIGSLHLLA------PYNKNNVS 770 Query: 181 CSLLSQQAQWLKDWITQKKESL---VPFVIAGDFN 212 Q + L + + + ++ GDFN Sbjct: 771 NRT--TQLENLTKRMRARPSAGGVSTGAIVMGDFN 803 >gi|260584055|ref|ZP_05851803.1| endonuclease/exonuclease/phosphatase [Granulicatella elegans ATCC 700633] gi|260158681|gb|EEW93749.1| endonuclease/exonuclease/phosphatase [Granulicatella elegans ATCC 700633] Length = 362 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 109/338 (32%), Gaps = 80/338 (23%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADI 68 + + ++ + S+NI + + S + + K + + + ++ + + DI Sbjct: 54 SLNTGKEYTISSFNIGYGAYPQDYSFFMDGGKYSRAYNRETVLDNMQGIQNAIQMIQPDI 113 Query: 69 VFLQEMGSY--------------NAVAK---VFPKNT---WCIFYSTERLINHSKRDSNN 108 QE+ + A K VF +N + + + + + Sbjct: 114 ALFQEIDTDGDRSQHVDEVEFITQAFEKQNWVFGQNYDSPYLFYPILDPIGKATSGLLTM 173 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +T + S P+ + F V L N K++ +++IHL + Sbjct: 174 SKYT-------IQSSQRYSLPIETNFNKFFDLDRAFTVSYLPVSNQKQLALINIHLSA-- 224 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 Y+ ++ Q + L ++ + E ++ GDFN I LG + + ++T Sbjct: 225 --------YTKDPTIGKSQLEKLFHYMESEYEKGNYVIVGGDFNHDI-LLGKSPEVFQTS 275 Query: 229 DP-------------NDSLIRFPKEKDSRCNAN---------KNLRNKIPIDYFVMDQNA 266 D + + + + K +D F++ N Sbjct: 276 DEPQTWTHPFPVENLSKHFTLATQGLAQQKIPSARALDEGYQKGRTFVTLVDGFIISDN- 334 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +N + SDH P+S+ + Sbjct: 335 -----------VQFNHVQAHDLEFQHSDHNPVSMSFTL 361 >gi|325915987|ref|ZP_08178280.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325537797|gb|EGD09500.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 279 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 86/293 (29%), Gaps = 60/293 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN----LDADIVF 70 A A+++ LV+ N++ D+ R Y L D++ Sbjct: 18 AAPAPSARELTLVTLNLHH----------------DREDWPSRRTYIAKELKQLAPDVIA 61 Query: 71 LQEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 LQE+ +A+ IF S + + + N Sbjct: 62 LQEVIERRGSVENQATWLARKLG--YEVIFASADPVGAPKRY--------------GNAL 105 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + A+ R A L V+++G+ + V HL + + + Sbjct: 106 LSRGKVLARHARLLQPLDDYRVAAHLQVDVDGQPVNVYVTHL------NERADARGTATR 159 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q L D+I P VIAGDFN + + + + + + Sbjct: 160 T--RQIGDLLDFIAS-TSVQAPVVIAGDFN-TAADALDLEALRRGYGDSYGSVHRNSDAT 215 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ QN + Y + G+ SDH Sbjct: 216 VSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDH 262 >gi|241766910|ref|ZP_04764717.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241362633|gb|EER58476.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 290 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 48/216 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 ++LV+WN +GV + V+ R +D+ D++ LQE+ Sbjct: 1 MQLVTWNTQWCCGLDGVVSPQRIVQHARALADF------------DVLCLQEIAVHYPAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + + P + +F+ + +R ++ IA R +++ Sbjct: 49 EGNAGHDQVALLRALLPG--YQVFFGAAVDEWTPDGQRQRFGNL---IATRLPVLQLQHH 103 Query: 127 SYPLLGAKDSFSRAGNRR-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P D+ R+ R V + + + V+ HL+ + + + +L Sbjct: 104 PLPYPA--DAGVRSMPRMCTVATVRDPGLGAVRVMTTHLEF--YSKRQRMAQARALRVLH 159 Query: 186 QQAQWLKDWITQKKESLVPF---------VIAGDFN 212 QA + PF V+ GDFN Sbjct: 160 AQACAHAVAPPEASGDGSPFQSKAHTPHAVLCGDFN 195 >gi|120436892|ref|YP_862578.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] gi|117579042|emb|CAL67511.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] Length = 276 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 115/313 (36%), Gaps = 49/313 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K++L L F + T Q++ ++++NI +E +G + W +R ++ Y Sbjct: 1 MKKFLLILSFLFI-TTGVTCQEIEVMTYNIKYANENDGENSW---SQRKEWITDQIQFY- 55 Query: 62 KNLDADIVFLQE-MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D++ +QE + S + + + +++ + + +AI + Sbjct: 56 ---EPDVLGVQEAVKSQL--------DFFTENINNYKVLGVGREGEDKGEFSAILYKSDK 104 Query: 121 VRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 VL+ + L G NR L + + KKIWV + H D + Sbjct: 105 FDVLKSNTFWLSETPEKISKGWDADYNRICTYALFQEKESEKKIWVFNTHF------DHV 158 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPN 231 + S L Q I + +P + GDFN + G +F + Sbjct: 159 GDKARLESSKLIIQK------IKELNREALPVFLMGDFNLEQESEGIRLISEFMEKSKEK 212 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P+ + N + + + IDY + + +L + ++K Sbjct: 213 ADFKFGPEGTFNGYNFTEAVTRR--IDYIFTNNQVHIKKYA-----VLSDSKNLKYP--- 262 Query: 292 LSDHCPISIDYDF 304 SDH P+ I DF Sbjct: 263 -SDHFPVLIIADF 274 >gi|293189928|ref|ZP_06608608.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] gi|292821147|gb|EFF80094.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] Length = 275 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 78/264 (29%), Gaps = 43/264 (16%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D++ +QE+ + +++ W + R+ + +AVR+ + Sbjct: 29 DTDVLLMQEVRAPEEISREIMGEAWESVWVPCRIKGRAG--------VGVAVRRGRAVLE 80 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +L ++ +G + E + V+ + S + + L Sbjct: 81 GEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKM---AHL 137 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------------------FW 225 + + + I ++ + ++ GDFN + + W Sbjct: 138 PRIGARMAELIAEEAGGGISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRW 197 Query: 226 KTIDPNDSLIRFPKEKDSR----CNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEIL 279 D++ + + N IDY + Sbjct: 198 VEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYATPALGE-------RARS 250 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 + +R SDH P+S+ Y+ Sbjct: 251 FEIGRADEYAERFSDHAPVSVTYE 274 >gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] Length = 262 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 92/309 (29%), Gaps = 75/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +RLVSWN+N L E +L AD+ LQE + Sbjct: 1 MRLVSWNVNGLRAAEKKGF---------------SDIFTSLKADVFALQETKLQEGQIDL 45 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSF--SR 139 FP + +S +S TA+ R+K ++VL P L + Sbjct: 46 EFP--DYESHWSYAERKGYSG--------TAVYARQKPLQVLHGLGVPHLDTEGRICALE 95 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 V++ ++ +D H ++ + C L + L Sbjct: 96 FPEFWFVDVYTPNAQNELARID-H------RMEWDDAFRDFCKGLEKGTTPLGP----DT 144 Query: 200 ESLVPFVIAGDFN--R-------------KINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 P ++ GDFN + + + + + F + Sbjct: 145 AQPKPVIMCGDFNVAHEEIDLKNPKSNRGNAGFSDEEREKFTKLLDAGFVDTFRLLNPTE 204 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A + IDYF++ ++ + L+ SDH Sbjct: 205 VGAYSWWSYRFNARANNAGWRIDYFLVSKSLADRVRAARIHADLFG-----------SDH 253 Query: 296 CPISIDYDF 304 CP+S+D D Sbjct: 254 CPVSLDIDL 262 >gi|172060778|ref|YP_001808430.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171993295|gb|ACB64214.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 284 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 109/310 (35%), Gaps = 56/310 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WN+ + +GV RT + L + D++ +QE+ Sbjct: 1 MRLIDWNVQWGRDADGVVDLA----RTIAAARSLGDF------DVLCMQEVTRGFGALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + IF + + + D+ AIA R RVL+Q P Sbjct: 51 QPGPDQFTELAALLPG--YTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + R A+E+ + + ++ HL + +D+L + +C+ Sbjct: 109 WPA--DAGEPSMPRVALEVELTTPSGALRIITTHLEFYSARQRLAQVDALRARHREACAH 166 Query: 184 LSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + Q ++ + +I GDFN ++D + + ++P F Sbjct: 167 -ADQPAPAENATGPFTATGQARDAIICGDFN----SAFDSDAYRRLLEPIADAPSFVDAW 221 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRLS 293 R + D ++ + ++ D + R R S Sbjct: 222 VGRHQGHTPPPTAGVYD-------TAQWSDGPLACDFVFVTDTLLPRVTRCEIDGDVRAS 274 Query: 294 DHCPISIDYD 303 DH P+ ++ D Sbjct: 275 DHQPVVLEVD 284 >gi|119776098|ref|YP_928838.1| hypothetical protein Sama_2966 [Shewanella amazonensis SB2B] gi|119768598|gb|ABM01169.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 394 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 84/275 (30%), Gaps = 37/275 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFLQEMGSYNA 79 +V + + N+ + + + LR +L+ADI+ QE+ S + Sbjct: 38 RVDIATLNLFNFLAPPAAAYEFDRIYSNEQWQKKCNWLRHCVSSLEADIIGFQEVFSVDE 97 Query: 80 VAKVFPKNTWCIFYSTER--LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + F + ++ R AIA R + V+ Sbjct: 98 LKALMLELGYPHFAVVDEPGCEDYVCRAPV----VAIASRLPLLEVVAVEPDPAALAAMD 153 Query: 138 SRAGNRRAVEL---LVEING-KKIWVLDIHLKSF--CFLDSLENTYSPSCSLLSQ----- 186 +A R + V +N + + +H KS F + LL+ Sbjct: 154 LKADFRFGRRVLRATVNLNDWGMLDIYVLHFKSQRPLFEPEALGDMQAAPRLLAHRALGS 213 Query: 187 ---------QAQWLKDW-ITQKKESLVPFVIAGDFNRKI-NYLGNNDDFWKTIDPNDSLI 235 +A L I ++ E+ P VI GDFN + I Sbjct: 214 FASSARRGFEAMLLYQAMIMRRDETAHPMVIMGDFNSGLDAAEFRGFWL------GADAI 267 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 ++ + I +F + + FL Sbjct: 268 HGNDKQAAGLGGLSEQAFANAISHFTLKDASVLFL 302 >gi|188991373|ref|YP_001903383.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. campestris str. B100] gi|167733133|emb|CAP51331.1| Endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. campestris] Length = 315 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 91/320 (28%), Gaps = 57/320 (17%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR-----------TTSDYTL 56 L+ + CT + A + N+ + ++ R D+ Sbjct: 22 VLMVLALSCTGAHAAQAEQA--NVQNAGQTAQSQQTASAAPREMTLVTLNLHHDREDWPA 79 Query: 57 LRQYAKN----LDADIVFLQEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 R Y L D++ LQE+ +A+ F S + + Sbjct: 80 RRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLARRLGYAY--TFASVDPPGAPKRY 137 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 N + ++ + R A L V+++G+ + V HL Sbjct: 138 --------------GNALLSKRRVLAQHQRLLQPLDDYRVAAHLQVDMDGRPVNVYVTHL 183 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + + + +Q L D+I + P VIAGDFN + + Sbjct: 184 ------NERSDARGAATRT--RQVADLLDFIAS-NSNQAPVVIAGDFN-TAADTLDLEAL 233 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 K + + + ID+ L+ IL++ Sbjct: 234 RKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFF---QQNRLLAREAR-ILFDTPY 289 Query: 285 IKSRGKRLSDHCPISIDYDF 304 R SDH + + F Sbjct: 290 ADGRWA--SDHYGVWVRLQF 307 >gi|160890835|ref|ZP_02071838.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|317479733|ref|ZP_07938855.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156859834|gb|EDO53265.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|316904103|gb|EFV25935.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 93/305 (30%), Gaps = 61/305 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 A + V ++S+NI + ++ + W+ R +R Y D DI+ QE+ Sbjct: 22 QAPAPEPVNVMSFNIRYDNPEDSLDNWQYRKDRAA---NAIRFY----DVDILGTQEVLH 74 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------ 128 + + P + + ++A+ +K +L Y Sbjct: 75 NQLEDLKQRLP--EYGVIGVGREDGKEKGE------YSALWYKKDRFNLLDSGYFWLSET 126 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P + + A R A ++ +GK+ + L+ HL SL+ Sbjct: 127 PEVAGSKGWDGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLD 181 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS--- 243 + L +P V+ GDFN +D DP++ + S Sbjct: 182 KVNELSG--------NLPVVVTGDFN----ASPESDVIKHVTDPSNPEHLTDARQASAIV 229 Query: 244 --RCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + + Y LSDH Sbjct: 230 YGPAWSFHDFGKIPYDKRPLIDYVFV---------RNGLKVLRYGVLAETENNAFLSDHA 280 Query: 297 PISID 301 PI + Sbjct: 281 PILVT 285 >gi|270339913|ref|ZP_06006433.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333322|gb|EFA44108.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 262 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 96/310 (30%), Gaps = 71/310 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M K L L+F L A+ AQ +R++++N+ + Sbjct: 1 MKNKITLILLFLLCVAHATTAQKKDTITLRVMTYNLRF---------------GELASLE 45 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKRDSNNDIH 111 + + ++ D+V LQE+ + +N Y T L + K + Sbjct: 46 DIAAHIRSFKPDLVALQEVDCKTYRERAPKQNGRDFISTLAYHTGMLGLYGKTIEYRKGY 105 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 I + + + + L RA R +E+ +G + HL Sbjct: 106 YGIGLLTRFPYIDMEKVMLPNPLQKEPRALLRANLEI----DGDTVIFAVTHL------- 154 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF---WKTI 228 + +S + QA+++ + P +I GDFN W + Sbjct: 155 ---DVFSEANRT--TQAKYINQYF---ARCPYPVIIGGDFNAAPTEECIKQTMKASWANL 206 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ND L + IDY + + + + D ++ Sbjct: 207 T-NDELTFHTSNPTIK------------IDY-LFGRPMNGWTVV-----------DTQTI 241 Query: 289 GKRLSDHCPI 298 LSDH PI Sbjct: 242 HSCLSDHRPI 251 >gi|255014700|ref|ZP_05286826.1| hypothetical protein B2_12389 [Bacteroides sp. 2_1_7] Length = 279 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 55/312 (17%) Query: 10 VFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + L A +K+ ++S+NI + + + WK D+ K + Sbjct: 1 MVALFATGCLFAKNNDEKMNVMSYNIRYDNLGDKDNQWKF-----RRDFA--ADLVKFYE 53 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVL 124 AD+ QE+ + + + + +V K L Sbjct: 54 ADVFGAQEVLNNQLNDLLNRLPEYAYVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWL 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + +G K + +L + N GKK + L+ HL + SL Sbjct: 114 AEDINAIGKKGWDAACERVATWAILKDKNTGKKFFFLNTHL-----DHMGKVARHEGASL 168 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + +QA+ L +P ++ GDFN + +++ +P+D + Sbjct: 169 VLEQAKKLS--------ENLPIIVTGDFN----AVPSDEPIQVLTNPSDPRHLTHSRTIA 216 Query: 244 RCNANKNLRN----------KIPIDYFVMDQNAYKF---LIQESFSEILYNEDDIKSRGK 290 + IDY + N ++ E+ + + Sbjct: 217 GFTYGPKWTFHDFGKIPYDKREWIDYIFVKGNIKVLRHGVLTETLNNLFP---------- 266 Query: 291 RLSDHCPISIDY 302 SDHCP+ Sbjct: 267 --SDHCPVISTL 276 >gi|154507728|ref|ZP_02043370.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] gi|153797362|gb|EDN79782.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 78/264 (29%), Gaps = 43/264 (16%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D++ +QE+ + +++ W + R+ + +AVR+ + Sbjct: 29 DTDVLLMQEVRAPEEISREIMGEAWESVWVPCRIKGRAG--------IGVAVRRGRAVLE 80 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + +L ++ +G + E + V+ + S + + L Sbjct: 81 GEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYFHSGEKDTPKQEAKM---AHL 137 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------------------FW 225 + + + I ++ + ++ GDFN + + W Sbjct: 138 PRIGARMAELIAEEAAGGISSLVCGDFNVVRSEADIKNWKPNHNKRAGVLDEEIAFLNRW 197 Query: 226 KTIDPNDSLIRFPKEKDSR----CNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEIL 279 D++ + + N IDY + Sbjct: 198 VEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYATPALGE-------RARS 250 Query: 280 YNEDDIKSRGKRLSDHCPISIDYD 303 + +R SDH P+S+ Y+ Sbjct: 251 FEIGRADEYAERFSDHAPVSVTYE 274 >gi|189346698|ref|YP_001943227.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245] gi|189340845|gb|ACD90248.1| Endonuclease/exonuclease/phosphatase [Chlorobium limicola DSM 245] Length = 347 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 90/344 (26%), Gaps = 63/344 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN----SVKRTTSDYTLLR--- 58 VL L + + L+ WN+ L + + R L Sbjct: 14 VLVLHSIKIHAGEQKNDSLLLMWWNVENLFDTHNDPDIDDEEFTPEGRNHWTQKKLALKR 73 Query: 59 -QYAKNLD-----------ADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSK 103 + + LD DI+ E + + K + + Y Sbjct: 74 LRIKQVLDSINTSPEYRRYPDILAFAETENRTVFAGILKEIGSSPYKTLYIESP------ 127 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 I +A + VR++ + ++ + R + G ++ H Sbjct: 128 --DKRGIDIGLAYNPQTVRLISSKFYIVPVG---NDKPTRHIIIAGFSAGGHPFRLMLNH 182 Query: 164 LKSFCFLDS-LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S F E + A L ++ ++ + +I GDFN + + Sbjct: 183 WPSRAFDKEWTEQKRITAAKTARHIADSL-----RRTDATIDLIIMGDFNDEPENR-SIK 236 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKF----LI 271 + + R + C + N ID ++ + + Sbjct: 237 QVLGSSGDAARVRRACSDLLYNCWSGYSGIGSYSYRNNWERIDQILLSCGMLQKKGLSIS 296 Query: 272 QESFS------------EILYNEDDIKSRGKRLSDHCPISIDYD 303 +F Y+ SDH P+ + D Sbjct: 297 HNAFRCFYFPNMLAQSANRPYSTYHKGKYKGGYSDHLPLLLKVD 340 >gi|299066602|emb|CBJ37792.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CMR15] Length = 269 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 91/313 (29%), Gaps = 81/313 (25%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ P + + + ++ + + +A+ + + + + Sbjct: 39 ELK--------LPDDRYP--LAELEAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVRN 88 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R V E+ G + V+ + + LDS + Y + L+ Sbjct: 89 IPGFADEQQ--RVVAATYEVAGGPVRVISAYFPNGQALDSDKMVYK------MRWLAALQ 140 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFP------------- 238 W+ + + ++ GDFN + +D W+ ++ R Sbjct: 141 AWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAGLVDAF 200 Query: 239 -----KEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++K + + ID+ ++ + + D + Sbjct: 201 RMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPDLARLCESCHI-------DRVPRGW 253 Query: 290 KRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 254 EQPSDHTPVVAAL 266 >gi|86357443|ref|YP_469335.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86281545|gb|ABC90608.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 263 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 82/312 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + +A+ K + + + P + Sbjct: 38 IDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKTSPFEVNRGLPGDPLDEQ-----A 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + + V I+L + +D+ + Y + + L+ + ++ Sbjct: 90 RFLEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRSFAAERLAYE 143 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 V+AGD+N R++ LG D Sbjct: 144 EMLVLAGDYNVIPEPHDCFDPRAWESDALFLPQTRRAFRRLENLGLTDAV----RATTDA 199 Query: 235 IRFPK--EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 R + + N I ID+ ++ A + + + + ++ Sbjct: 200 TRLYSFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKP 249 Query: 293 SDHCPISIDYDF 304 SDH P+ +DF Sbjct: 250 SDHVPVIAYFDF 261 >gi|218681503|ref|ZP_03529390.1| hypothetical protein RetlC8_22861 [Rhizobium etli CIAT 894] Length = 242 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 82/265 (30%), Gaps = 60/265 (22%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + +ADIV LQE+ + + + S ++ H S + Sbjct: 24 DPGRIASVIAEAEADIVALQEVD--VSRRRTGGVDQAHAIASPLKMQAHFHPALSIAEEQ 81 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 82 YGDAIITALPTGAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL------- 128 Query: 172 SLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFN-------RKINYLGNNDD 223 L + Q L W+ +P ++ GDFN ++ D Sbjct: 129 GLRGRER-----IRQMTTLLNAGWLHGSVGESLPAILCGDFNAIPASATYRLAARSLKD- 182 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILY 280 + A + P ID+ + + ++ Sbjct: 183 ---------------AQLAGSTAARATFPARYPLMRIDHIFVTDDL-----------VVK 216 Query: 281 NEDDIKSRGKRL-SDHCPISIDYDF 304 ++SR R+ SDH P+ + F Sbjct: 217 RSAVMESRLTRVASDHLPLLAEIGF 241 >gi|152982063|ref|YP_001354787.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] gi|151282140|gb|ABR90550.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] Length = 264 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 32/195 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI +GVS + S R L+Q ++ +D++FLQE+ + + Sbjct: 2 QLRITTYNI-----HKGVSSF-GSRPR----IHALKQAINSMKSDVLFLQEVQGRHDLHA 51 Query: 83 VFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---F 137 + W + +H N ++ + L YP+L +++ Sbjct: 52 LKHATDWPELSQQDFLAGDSHECAYGMNAVYD----HGHHGNALLSCYPILSSRNQNISD 107 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + +R + +V ++ IHL F S +Q + L + +T Sbjct: 108 HKYESRGILHCVVRAPEAEVHCFVIHL--GLFAGSR-----------KRQTEALIEAVTS 154 Query: 198 KKESLVPFVIAGDFN 212 + P +IAGDFN Sbjct: 155 SAQKDEPLIIAGDFN 169 >gi|167587042|ref|ZP_02379430.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 284 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 114/319 (35%), Gaps = 74/319 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + +GV + RT + L + D++ LQE+ Sbjct: 1 MRLIDWNIQWGRDADGVV----DLPRTIAAARGLGDF------DVLCLQEVTRGFGALAG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTE---RLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + +A + P T + +R N AIA R RV+++ Sbjct: 51 HPEPDQFAELAALLPGFTVVEAIGADLPPTAPGAPRRQFGN----AIASRLPVGRVMRRL 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSC 181 P D + + R A+E+ + + V HL+ + +D+L + + +C Sbjct: 107 LPWPA--DDAAPSMPRVALEVELATASGPLRVTTTHLEYYSARQRLAQVDALHDRHREAC 164 Query: 182 SLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPND 232 + + A+ + + PF ++ GDFN ++D + + ++P + Sbjct: 165 AHADRPARA--------EHADSPFSATAQPRDAIVCGDFN----SAYDSDAYRRFLEPVE 212 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-- 290 RF + + + I + ++ + ++ D + R Sbjct: 213 GAPRFV-DAWAALHPGAAPPPTAGIY------DTVQWSEGPLACDFVFVTDTLLPRVARC 265 Query: 291 ------RLSDHCPISIDYD 303 R SDH PI ++ + Sbjct: 266 EIDGDLRASDHQPIVLELN 284 >gi|121593299|ref|YP_985195.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|222110021|ref|YP_002552285.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|120605379|gb|ABM41119.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|221729465|gb|ACM32285.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 255 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 98/286 (34%), Gaps = 51/286 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI +GV + + L + LDADIV LQE+ N K Sbjct: 16 LRVATYNI-----HKGVQGLGPAR---RLEIHNLGLAVEQLDADIVCLQEVRRMN--RK- 64 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVLQQSYPLLGAKD---SFS 138 + ++ + + + I+ A ++ L +P++G + S Sbjct: 65 --EASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDISDH 122 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R R + + VEI G+++ + +HL S +Q L+ +I ++ Sbjct: 123 RFEQRGLLHVEVEIQGRRVHAIVVHL--GLVPGSRI-----------RQVAQLQRFIARE 169 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 P V+AGDFN D + F + +A + + Sbjct: 170 VPEDAPLVVAGDFN---------DWGLQIKRMLAGFGLFEYD-----DAPQAFTYPARLP 215 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D + L R+SDH P+ ++ Sbjct: 216 MVQLDHVYVRGLTPLGLQVPR------GRIWWRMSDHLPLIAEFKL 255 >gi|218673944|ref|ZP_03523613.1| exodeoxyribonuclease III Xth [Rhizobium etli GR56] Length = 263 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 93/310 (30%), Gaps = 78/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K A D S R Sbjct: 38 IDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKTSPSEVNRGLPGDALDEQS----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V I+L + +D+ + Y + + L+ + ++ Sbjct: 91 FLEAVFTLPDTRILRVCCIYLPNGNPVDTEKYPYKLA------WMERLRMFAAERLAYEE 144 Query: 204 PFVIAGDFNRKINYLGNND----DFWK----------------TIDPNDSLIRFPKEKD- 242 V+AGD+N +D W+ +R + Sbjct: 145 ILVLAGDYN---VIPEPHDCFDPKVWESDALFLPQTREAFRRLENLGLTDAVRATTDATR 201 Query: 243 --------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N I ID+ ++ A + + + + ++ SD Sbjct: 202 LYSFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSD 251 Query: 295 HCPISIDYDF 304 H P+ +DF Sbjct: 252 HVPVVAYFDF 261 >gi|118594091|ref|ZP_01551438.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] gi|118439869|gb|EAV46496.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] Length = 260 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 93/302 (30%), Gaps = 69/302 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+N+L+ + + + K + DI+ LQE Sbjct: 3 KIATWNVNSLNVR----------------LEHVIDWVKIHNPDILCLQETK--------- 37 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + I + + + +A+ K ++ + P G Sbjct: 38 -QTNDKFSHEAFDSIGYKSYHNGQKTYNGVAIISNKELQNVGSDIPGFSDPQKRIIHGLY 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + L + I V+ ++ + LDS + Y S + W+ Sbjct: 97 PSRSLGL------IHVVSAYVPNGQSLDSEKFKYKVS------WLEAFNTWVKSSYGKSD 144 Query: 204 PFVIAGDFN---RKINYLGNNDD------------FWKTIDP---NDSLIRFPKEKDSRC 245 ++ GDFN R I+ + I +DS K+ Sbjct: 145 HHILTGDFNIAPRDIDCHDPEAWKGNILVSQIERDLFDAIIDIGFDDSFRVLNKDIQKFS 204 Query: 246 N-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 A + ID+ + + + L Y ++D + +R SDH P+ Sbjct: 205 WWDYRMAGFRRNLGMRIDHILTSHSLKENLT------TAYIDED-PRKLERPSDHTPVIT 257 Query: 301 DY 302 ++ Sbjct: 258 EF 259 >gi|296387571|ref|ZP_06877046.1| predicted extracellular nuclease [Pseudomonas aeruginosa PAb1] Length = 780 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 106/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 559 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F NR + + G+++ + HLKS C Sbjct: 560 YRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ +I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRGAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 770 >gi|297564320|ref|YP_003683293.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848769|gb|ADH70787.1| Endonuclease/exonuclease/phosphatase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 634 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 98/294 (33%), Gaps = 54/294 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P AS + +R+ ++N+ + G + + LR LDAD+V L Sbjct: 389 FAPAPASGTEGLRVAAYNV-----RMGFGMDGRFSVTEQA--GALR----RLDADVVVLS 437 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERL--INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + N S L + + AV ++ +PL Sbjct: 438 EVDRGWLLN---GGND---VLSRLALELGMAAHWGPADGPLWGDAVLTSLPVTRERRHPL 491 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + ++ A+E+ V+ G + V+ H++ E++ Q + Sbjct: 492 TPSGPTGAQ-----ALEVTVDHGGTGVTVVSTHVQPADRGFRAESSRR--------QLRE 538 Query: 191 LKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + + I ++ P V+AGD N + +D W + + L F + + Sbjct: 539 IAE-IARRARERGTPVVVAGDLN-----IEPDDPAWGLLTEHGLLDAFRNTRPFPTLPGE 592 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ + + L D+ SDH P+++ Sbjct: 593 TGS-DQQIDHVLHTGD----LAPSD-----PANPDVPH-----SDHRPVAVTLT 631 >gi|85714027|ref|ZP_01045016.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] gi|85699153|gb|EAQ37021.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] Length = 226 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 82/284 (28%), Gaps = 64/284 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++WN+ +L D + + DIV LQE+ S Sbjct: 4 TIRVMTWNV-----HGTFNLNPRF------DIEAVASIIRRWSPDIVGLQEIDSR----- 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +N + + + I TA + + + D R Sbjct: 48 --GRNDNP--FERLAGVVGAHNVDARSIVTADGDYGQVLLSKWRFIRAPTIVDVSYRERE 103 Query: 143 -RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RRA+ ++ +I V+ HL S+ + +QA+ + + I + Sbjct: 104 ARRAISACIQSPIGEIAVIATHL-----GLSIRERH--------EQARAIVNLIDAPRT- 149 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYF 260 V+ GDFN D FW R P R + + I Sbjct: 150 ----VVLGDFN---------DWFWVKSVRRILAQRCPVRTRMRTFPSWCPVLRLDRIYTV 196 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + E + SDH P+ D F Sbjct: 197 QTGNIVRAWTDPE---------------ARGRSDHLPVIADVMF 225 >gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|330823549|ref|YP_004386852.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] gi|317116239|gb|ADU98727.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|329308921|gb|AEB83336.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] Length = 253 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 45/201 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +R+ ++NI +GV + + L + LDADIV LQE+ A Sbjct: 14 LRVATYNI-----HKGVQGLGPAR---RLEIHNLGLAVEQLDADIVCLQEVRKMNHKEAA 65 Query: 81 A-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVLQQSYPLLGAK 134 +V P+ + + +T R + L +P++G + Sbjct: 66 YFKRWPRV-PQAEYL-------APEGYAAVYRTNAYT----RHGEHGNALLTRWPVVGHQ 113 Query: 135 D---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R R + + VE+ G+ + + +HL S +Q + L Sbjct: 114 HEDISDHRFEQRGLLHVEVEVQGRCVHAIVVHL--GLIPGSRV-----------RQVERL 160 Query: 192 KDWITQKKESLVPFVIAGDFN 212 + +I ++ + P V+AGDFN Sbjct: 161 QRFIAREVPAGAPLVVAGDFN 181 >gi|332708957|ref|ZP_08428928.1| exodeoxyribonuclease III [Lyngbya majuscula 3L] gi|332352499|gb|EGJ32068.1| exodeoxyribonuclease III [Lyngbya majuscula 3L] Length = 262 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 101/308 (32%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N++ ++ + + + D++ LQE + Sbjct: 1 MKIATWNVNSIRSRQAQVI----------------DWLQRTQVDVLCLQETKVVDAQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +F + + ++ S ++ N R D+ A + L + Sbjct: 45 SLFEELGYYLYISGQKSYNGVAIFSRKPATDVSMGFA-----AVLDTAQVGDLDEQKRV- 98 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ- 197 + ++G + ++++++ + ++S + Y + + L+D++ Sbjct: 99 ---------ISATVDG--VRIVNLYVPNGASVNSEKYDYK------LRWLKILRDYLHSI 141 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKT------------------IDPNDSLIRFPK 239 +E + GDFN + ++ K + D+ +F K Sbjct: 142 LEEQSHELCVCGDFNIALEDRDIHNPKGKEKHIMASPVERQALQSVLDLGLGDAFRKFTK 201 Query: 240 -EKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + ID+ + N Y I + D + + SD Sbjct: 202 EGGNFSWWDYRTRAFRGNRGWRIDHIYLTPNLYNQAISCTI-------DIEPRKLDKPSD 254 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 255 HSPVIVNL 262 >gi|257463185|ref|ZP_05627585.1| hypothetical protein FuD12_04976 [Fusobacterium sp. D12] gi|317060775|ref|ZP_07925260.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] gi|313686451|gb|EFS23286.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] Length = 274 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 95/298 (31%), Gaps = 35/298 (11%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K+ + F AS+AQ+ + ++N+ L E D+ + + + Sbjct: 2 KFFYPYLLFFCLSIASLAQEAYIATFNVLKLGESP-------------KDFETIAKTMNH 48 Query: 64 LDADIVFLQEMGSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 D+V L+E+ + + ++ N + + + + A +K V+ Sbjct: 49 F--DLVGLEEVITPEGLERLVKSLNKYTNYTWDYHISPFPVGTRKYKEYYAYVWKKDKVK 106 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 L + F R + + L+ + S + + Sbjct: 107 FLASEGFYPDKEKLFIREP--YGASFQIGNFDFTLV-----LQHAVYGKSETERRAEAFH 159 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 L+ + + + +I GDFN L D+ + + + I + + + Sbjct: 160 LIK-----VYRYFQDRDRKENDILIGGDFN-----LSAFDEAFSPLYEDKDQIIYGIDPN 209 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + D + + + +S + + D K ++SDH P+ I Sbjct: 210 IKTTIGMKKMANSY-DNIFLSKIYTQEFTGKSG-AVDFTNRDYKVMRNKVSDHLPVFI 265 >gi|83647712|ref|YP_436147.1| endonuclease/exonuclease/phophatase family protein [Hahella chejuensis KCTC 2396] gi|83635755|gb|ABC31722.1| endonuclease/exonuclease/phophatase family protein [Hahella chejuensis KCTC 2396] Length = 445 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 89/275 (32%), Gaps = 20/275 (7%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 L+ L K T++ + + K DA V QE+ A+ F + Sbjct: 179 LTYNAWALLPGLMSKNTSNRLATMAEAVKGYDA--VVFQEVFDPILTAR-FRSD-----L 230 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 E + T + +L Q + + ++ A ++ Sbjct: 231 QAEYPYLTEIPFKLGRLLTGGSFIASRWPILAQDAMVYEGCRNDGCFASKGANYAKIDKG 290 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFN 212 G+ + H + T +L Q K ++ K + P +IAGD N Sbjct: 291 GQIYHLFGAH--------THAYTGEEDVALRRWHLQQYKAFVDSKGAAADEPVIIAGDLN 342 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 K+N+ + D +D ++ + +P D N + + +DY + + Sbjct: 343 VDKLNFPAEHQDMLAILDASEPPSQSQYPHSYDGGVNTFADSQLTEYLDYVLTSNSHVAP 402 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I LSDH P+ ++ F Sbjct: 403 VYSHNRVRIPRFIQWEHWTSWDLSDHFPVEGEFVF 437 >gi|329964595|ref|ZP_08301649.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328524995|gb|EGF52047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 286 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 98/321 (30%), Gaps = 63/321 (19%) Query: 5 YVLALVFFLVPC----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++ A L+ A Q + ++++NI + + + WK R + ++ Y Sbjct: 7 FLCACSILLLGSCKNQPAQNGQPLEVMTFNIRLDAPSDSANNWKY---RKDNACKMIAYY 63 Query: 61 AKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKR----DSNNDIHTAI 114 D++ +QE+ + + P + + D T Sbjct: 64 ----QPDLLGMQEVCHNQMEDLKQGLP--QYTALGVGRDDGKEAGEYCPVFFKTDRFT-- 115 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDS 172 V N + +P + + NR +++ NGKK + HL + Sbjct: 116 LVEYGNFSL--SEHPDTIGIKGWDASYNRVTTWAVLQEKSNGKKFVYFNTHL-----DND 168 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + L L I + VP +I GDFN +++ + ++ Sbjct: 169 GKIARKEGVQL------ILNK-IKE-IAPDVPAIITGDFN-----CEPDEEPLQILEKGG 215 Query: 233 SLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283 ++ E + ++ IDY + A Y Sbjct: 216 --MQNTSETAGITYGPSWSFHDFGRIPLDERVLIDYVFVTDGAK---------VNRYRVI 264 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 LSDHCP+ ++ Sbjct: 265 QDAPENGFLSDHCPVLVNLTL 285 >gi|115351807|ref|YP_773646.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115281795|gb|ABI87312.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 286 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 109/309 (35%), Gaps = 58/309 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WN+ + +GV D A+ L D D++ +QE+ Sbjct: 1 MRLIDWNVQWGRDADGVV-----------DLARTIAAARRLGDFDVLCMQEVTRGFGALP 49 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSY 128 + +A + P + IF + + + D+ AIA R RVL+Q Sbjct: 50 GQPGPDQFTELAALLPG--YTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLL 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCS 182 P D+ + R A+E+ + + ++ HL + +D++ + +C+ Sbjct: 108 PWPA--DASGPSMPRVALEVELTTPSGALRIITTHLEFYSARQRLAQVDAMRARHREACA 165 Query: 183 LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + Q ++ + +I GDFN ++D + + ++P F Sbjct: 166 H-ADQPAPAENATGPFTATGQARDAIICGDFN----SAFDSDAYRRLLEPIADAPSFVDA 220 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRL 292 +R + D ++ + ++ D + R R Sbjct: 221 WVARHAGHTPPPTAGVYD-------TAQWSDGPLACDFVFVTDTLLPRVTRCEIDGDVRA 273 Query: 293 SDHCPISID 301 SDH P+ ++ Sbjct: 274 SDHQPVVLE 282 >gi|301162733|emb|CBW22280.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 279 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 95/316 (30%), Gaps = 66/316 (20%) Query: 11 FFLVPC-----TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 FF C AS + V ++S+NI + ++ + W R D + D Sbjct: 3 FFAASCGQVKQQASAPEPVNVMSFNIRYDNPEDSLDNW-----RYRKDRVANAIHF--YD 55 Query: 66 ADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI+ QE+ + P + + ++A+ +K V Sbjct: 56 VDILGTQEVLHNQLEDLKLRLP--EYGVVGVGREDGKEKGE------YSALWYKKDRFNV 107 Query: 124 LQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 L Y P + + A R A + ++ +GK+ + L+ HL Sbjct: 108 LDSGYFWLSETPEVAGSKGWDGACERIASWVKLQDKVSGKEYFALNTHL-----DHVGGM 162 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 SL+ + L D +P ++ GDFN +D D + Sbjct: 163 ARREGISLMLDRVNELSD--------GLPVIVTGDFN----SEPESDVIKHVTDFANPEH 210 Query: 236 RFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + S + + IDY + + + Y Sbjct: 211 LTDARQASPIVYGPSWSFHDFGKIPYNKRPLIDYVFV---------RNGLKVLRYGILAE 261 Query: 286 KSRGKRLSDHCPISID 301 LSDH P+ + Sbjct: 262 TENNAFLSDHTPVLVT 277 >gi|300703904|ref|YP_003745506.1| exodeoxyribonuclease III [Ralstonia solanacearum CFBP2957] gi|299071567|emb|CBJ42891.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CFBP2957] Length = 269 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 94/318 (29%), Gaps = 91/318 (28%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L+E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK---KNVRVLQQS 127 E+ P + + + ++ + + +A+ RK R + ++ Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILARKAAMPEGRDVVKN 88 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + V ++ G + V+ + + LDS + Y + Sbjct: 89 IPGFADEQQRI-------VAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRW 135 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFP-------- 238 L+DW+ + + ++ GDFN + +D W+ ++ R Sbjct: 136 LAALQDWLKAEMVAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAG 195 Query: 239 ----------KEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDD 284 +K + + ID+ ++ + D Sbjct: 196 LVDAFRMFDQADKLFSWWDYRLFAFRRNAGLRIDHILLSPELAQRCESCHI-------DR 248 Query: 285 IKSRGKRLSDHCPISIDY 302 + ++ SDH P+ Sbjct: 249 VPRGWEQPSDHTPVVAAL 266 >gi|256061437|ref|ZP_05451581.1| Endonuclease/exonuclease/phosphatase family protein [Brucella neotomae 5K33] gi|261325444|ref|ZP_05964641.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] gi|261301424|gb|EEY04921.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] Length = 369 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 117/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ ++SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKVSDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|254526744|ref|ZP_05138796.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] gi|221538168|gb|EEE40621.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] Length = 281 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 83/312 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + +WN+N RT + + + ++ DI+ LQE KV Sbjct: 3 IATWNVN--------------SIRTR--LSQIIDWINQVNPDILCLQE-------TKVMD 39 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + ++ + +A+ + ++ P K + + Sbjct: 40 DS---FPTEPFEKLGYAVEVYGQKSYNGVAI-------ISKTKPENVKKGFYGCTNFNQN 89 Query: 146 VEL------LVEINGKKIWVLDIHLKSFCFLDSLENTYS---PSCSLLSQQAQWLKDWIT 196 +E+ L+ + I ++++++ + L+S + Y +C L ++ Sbjct: 90 IEIFQDQKRLISADINNIKIINVYVPNGSSLESSKFEYKINWLNC---------LGSFLD 140 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTIDPN-----------DSLIRFP 238 ++++ + GDFN + L +D I+ N DS F Sbjct: 141 EQEKKGELICLLGDFNIAPSNLDIHDPKKYEGGIMASEIERNALNNVLKKRLIDSFRIFE 200 Query: 239 KEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-RL 292 + L ID+ + + L D RG R Sbjct: 201 QNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSCVI--------DCSPRGYLRP 252 Query: 293 SDHCPISIDYDF 304 SDH P+ ID + Sbjct: 253 SDHAPVMIDLNL 264 >gi|254494845|ref|ZP_01051882.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|213690427|gb|EAQ41310.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 333 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 95/300 (31%), Gaps = 77/300 (25%) Query: 16 CTASVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +S+ ++++S+N+ + E+ + + ++ + DI+ Sbjct: 88 SRSSLNSDLKIMSYNVRMFNHWQWIEEEGIPN--------------KISEFVSAKEPDIL 133 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD---SNNDIHTAIAVRKKNVRVLQQ 126 LQE S N+ + N + + +A+ + + Sbjct: 134 LLQE-----------------FHNSDNPSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKG 176 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL-- 184 S L ++ A V I + ++HL+S EN + L Sbjct: 177 SLELTDTSNNIIFAD--------VLKGKDTIRIYNLHLQSLELNAEAENFGQENSEKLLA 228 Query: 185 ------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 +QA+ ++++ + +++GDFN Y + I N Sbjct: 229 RLRAGFKKQAEQTEEFLLHEANWKGKKIVSGDFN-NTAYS----WVYNQISNNKKDAYIE 283 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K N + ID+ + D+NA + S ++ SDH PI Sbjct: 284 AGK--GFGKTYNYAFPLRIDFILTDENA--------------IINQFTSFNEKNSDHFPI 327 >gi|330972028|gb|EGH72094.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 233 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 87/254 (34%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ +V + + S + + D Sbjct: 15 LREAVRTVSADIVFLQEVHGEQQSHARRVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +++ + ++ + +HL Sbjct: 75 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILDV---PHAGRVHAICVHL------ 124 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 125 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRQRAD---ASLQG 170 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 171 SGLHEVFVERFGA---PAKSFPARWPL--LCLDRIYVRNATSHRPKVLS------SRPWS 219 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 220 HLSDHAPLAVELTL 233 >gi|221068733|ref|ZP_03544838.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] gi|220713756|gb|EED69124.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] Length = 291 Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 72/213 (33%), Gaps = 40/213 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + ++SWN+ +G + SV+R + + A L D++ LQE+ Sbjct: 1 MNILSWNVQWCCGMDG----QVSVERIVRHALQMGEQAGGL--DVLCLQEIAVNYPDLQG 54 Query: 75 ---GSYNAVAKVFPKNTWCIFY--STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + P W I + S + + + N +A R +++ P Sbjct: 55 QPGDQPAELKALLPG--WQIVFGASVDEFTSRGHQRFGNL----VATRLPLLQLQHHPLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + D R R + V + ++ HL+ F + + L QA Sbjct: 109 MPADADV--RCMQRMCSVVTVADAALGPVRIMTTHLEY--FSKRQRMAQAGALRDLQMQA 164 Query: 189 QWLKDWITQKKESLVPF---------VIAGDFN 212 L D Q P+ V+ GDFN Sbjct: 165 CALADAPPQPASDGSPYQTKPHTRHAVLCGDFN 197 >gi|229495328|ref|ZP_04389063.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] gi|229317771|gb|EEN83669.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] Length = 402 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 90/263 (34%), Gaps = 55/263 (20%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 +Y K+ ADIV LQE A+ + + S +++ + A R Sbjct: 167 RYIKDSHADIVCLQE----AAIMR-----DDSPYVSAKKITEYLPEYPYVVTRYAQGDRG 217 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ +L + +P+ + + + +++ G+++ V ++HL+SF Y+ Sbjct: 218 TSLMLLSK-FPVRNTRMLPLESTFNGGIAYTLDVAGRELTVFNLHLESFRLTTEDGTRYA 276 Query: 179 PSCS-----LLSQQAQW-LKDWITQKKE-----------SLVPFV-IAGDFN-RKINYLG 219 L +Q + L ++ + P++ + GDFN I+Y Sbjct: 277 RLAREIEAVALKEQMEQKLGPAFLKRAKQADRVHVEIIHEKTPYILVCGDFNDTPISYAH 336 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFS 276 + + C + K ID+ + S Sbjct: 337 QR----------IASGLIDAYASTGCGTGYSFTFKRLGFRIDHIL-----------HSRR 375 Query: 277 EILYNEDDIKSRGKRLSDHCPIS 299 YN KS +SDH P+S Sbjct: 376 VKSYNCKVDKS--ATISDHKPLS 396 >gi|326801323|ref|YP_004319142.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326552087|gb|ADZ80472.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 338 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 15/125 (12%) Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-SLIRFPKEKDSRCNAN 248 L ++I + ++ GD N Y +D+ + N + A Sbjct: 214 QLSNYIKEH-SGDRAVIVMGDLNAHFCY--EHDNIRDLLAQNGLKDAWVTLKAKDSFPAF 270 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K + ID + +A L ++ NE G LSDHCP+S Sbjct: 271 KKFVKEDILKLTDDCESIDKILFRSSADLLLTPNAYR--FENEKFNNKEGIPLSDHCPVS 328 Query: 300 IDYDF 304 + + + Sbjct: 329 LSFSW 333 >gi|329905898|ref|ZP_08274279.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium IMCC9480] gi|327547429|gb|EGF32252.1| hypothetical protein IMCC9480_2684 [Oxalobacteraceae bacterium IMCC9480] Length = 326 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 98/312 (31%), Gaps = 43/312 (13%) Query: 22 QKVRLVSWNINTLSEQEG---VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++R S+N+ L+ S+ + + L Q LDAD++ QE+ S + Sbjct: 3 HEIRFASFNVFNLALPGARFYDGQEPYSISQYDDKISWLAQQIDRLDADVIGFQEIFSQD 62 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYP-----LL 131 A+ V + + + RD A+ R V VL + P L Sbjct: 63 ALRDVLARTR-HFRDAHHAGSDPQPRDGPLTPSVALVSRLPFAGVPVLHRDLPRQLAIAL 121 Query: 132 GAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R +++ + +G + H+KS D + L Sbjct: 122 PDTPTPMTQFTRPILQVPLALPDGGTLQAFVTHMKSK-RPDWNPDETEDDPYHLG--IAS 178 Query: 191 LKDWITQ--------------KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-- 234 L+ I + VP V+ GDFN + +L Sbjct: 179 LRSLIRRGTDALGLRYLLTDLLLAQRVPLVVMGDFNDDAGAVSTQLVMGTGRRGKSALYE 238 Query: 235 -----IRFPKEKDSRCNANKNLRNKI---PIDYFVMD---QNAYKFLIQESFSEILYNED 283 +R +D + + +D+ ++ A ++ I E + Y D Sbjct: 239 RLFDSLRIQTGRDPSRDVGYTHLHDGAYLTLDHVLVSEEFHPASRYAIGEVLEVL-YLND 297 Query: 284 DIKSRGKRLSDH 295 + R SDH Sbjct: 298 HLGLRLAAASDH 309 >gi|289671214|ref|ZP_06492289.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 303 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 92/292 (31%), Gaps = 60/292 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN----LDADIVFL 71 +++ +++ LV+ N++ D+ R Y L D++ L Sbjct: 40 PSSTAPREMTLVTLNLHH----------------DREDWPARRAYIAKELKQLAPDVIAL 83 Query: 72 QEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 QE+ +A+ + F S + + + + A+ R+ + Sbjct: 84 QEVIERRGSVENQAAWLARKLGYDY--TFASVDPVGAPKRYGN------ALLSRRNVLAT 135 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 Q+ L R A L V+++G+ + V HL E T + + Sbjct: 136 HQRLLQPLDDY--------RVAAHLQVDVDGQPVNVYVTHL--------NERTDARGTAT 179 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +Q L D++ P VIAGD N + + K + + + Sbjct: 180 RKRQVTDLLDFVAS-NSEQAPVVIAGDLN-TAADTLDLEALRKGYGDSYGSVHRNSDATV 237 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ QN + Y + G+ SDH Sbjct: 238 STLNMQVFDKPARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDH 283 >gi|194366452|ref|YP_002029062.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194349256|gb|ACF52379.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 297 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 77/241 (31%), Gaps = 38/241 (15%) Query: 62 KNLDADIVFLQEM-------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 K L D + LQE+ +A +F ST+ + + Sbjct: 75 KRLQPDAIALQEVIQRRTLRNQAQWLASQLGYTY--LFVSTDPVGAPKRY--------GN 124 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ + + + + LL D + A R ++++G+ + V HL E Sbjct: 125 ALLTRRPVLARNDHLLLPLDDYRTVAHLR------IDVDGRPVNVYATHL--------NE 170 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + Q + L +IT + P VIAGDFN ++ ++ + D S+ Sbjct: 171 RSDESGQRIRRTQVEDLLRFITA-TSAAAPVVIAGDFNALVDAGDLSELRSRYGDSYGSV 229 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ ++ + DD SD Sbjct: 230 HVNTDLAGVSTLNRHYYQAPSRIDHIFF---QQDEMVAREAKILFDQPDDSGRWA---SD 283 Query: 295 H 295 H Sbjct: 284 H 284 >gi|294625453|ref|ZP_06704084.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664696|ref|ZP_06730028.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600276|gb|EFF44382.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605521|gb|EFF48840.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 96/294 (32%), Gaps = 64/294 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 A+ ++++ LV+ N++ E + + K L D++ LQE+ Sbjct: 39 SPATASREMTLVTLNLHHDREDWPARR------------AHIAKELKRLAPDVIALQEVI 86 Query: 75 -------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +A+ + F S + + + + A+ R++ + Q+ Sbjct: 87 ERRGGVENQAAWLARKLGYDY--TFASVDPVGAPKRYGN------ALLSRRRVLATHQRL 138 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L R A L V+++G+ + V HL + + +Q Sbjct: 139 LQPLDDY--------RVAAHLQVDVDGQPVNVYVTHL------NERADARGTGIRT--RQ 182 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTI-----DPNDSLIRFPKEK 241 L D+I + P VIAGDFN D + + D S+ R Sbjct: 183 VADLLDFIAS-NSAQAPVVIAGDFN------TAADTLDLQALRRGYGDSYGSVHRNSDAT 235 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 S N + ID+ QN + Y + G+ SDH Sbjct: 236 VSTLNMHV-FDRPARIDHVFFQQNRLLAREARILFDTPY------AEGRWASDH 282 >gi|302419937|ref|XP_003007799.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] gi|261353450|gb|EEY15878.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] Length = 334 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 90/339 (26%), Gaps = 90/339 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK-- 82 R+ +WN+N + G W R + + L+ADI+ QE + + Sbjct: 3 RITTWNVNGIRNPFGYQPW-----REKRTFEAM---FDILEADIIIFQETK----IQRKD 50 Query: 83 ------VFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + P W +++S + +S T +R + P K Sbjct: 51 LKDDMVLIPG--WDVYFSLPKYKKAGYSGVVIYTRNATCCPIRAEEGIFGVLCPPDSSTK 108 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE-----NTYSPSCSLLSQQ-- 187 + E I + + C + TYSP+ S+Q Sbjct: 109 FRDLPKEQQIGGYPTAEQLSSDIDEATLDSEGRCVILEFPAFVLIGTYSPANRDESRQEF 168 Query: 188 ----AQWLKDWITQKKESLVPFVIAGDFNR--------KINYLGN------NDD------ 223 L + + ++ GD N ++ +D Sbjct: 169 RLGYLSALDARVRNLVAAGKQVILTGDLNVSRSEIDTINLSEQLRKEDMTMDDWMAIPSR 228 Query: 224 -FWKTI------------DPNDSLIR-------FPKEKDSRCNANKNL----RNKIPIDY 259 + + ++ ++ C K N IDY Sbjct: 229 RLFNQLLFEGQVRGDRDPGREQPVLWDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDY 288 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + I + E G SDHCP+ Sbjct: 289 LLCSAGIKDWFIDSNIQE-----------GLHGSDHCPV 316 >gi|218509998|ref|ZP_03507876.1| putative metal-dependent hydrolase protein [Rhizobium etli Brasil 5] Length = 242 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 82/256 (32%), Gaps = 42/256 (16%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + ADIV LQE+ + + + S ++ H S + Sbjct: 24 DPGRIASVIAEAGADIVALQEVDVLR--RRTGGIDQAHLIASLLKMQAHFHPALSIAEEQ 81 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 82 YGDAIITALPTSAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL-----GL 130 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 +LL+ W+ E +P V+ GDFN + +++ Sbjct: 131 RGRERIRQMTTLLN------SGWLRGAMEEPLPCVLCGDFN-ALPSSATYRLVARSLKD- 182 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + ++ P +D+ + + L+ + + + + Sbjct: 183 -------AQLGGKAAPRATFPSRYPLMRLDHIFVTDD----LVVKRAAVLQNRLTKVA-- 229 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 230 ----SDHLPLFAEISF 241 >gi|327480794|gb|AEA84104.1| exonuclease III [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 88/314 (28%), Gaps = 80/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLSAIIDKHQPDVIGLQETKVADEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + ++ + + +P G + Sbjct: 45 AEIEALGYHV------------HYHGQKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFI 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A + NG+ + V++ F + ++ L+ + Q+ Sbjct: 93 WGRFA-----DANGQPVTVMN-----GYFPQGESRAHPVKFPAKTKFYADLQALLEQRFS 142 Query: 201 SLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDS 233 + GDFN R + + W D + Sbjct: 143 PDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSFLPEEREWLERIKGWGLQDSFRT 202 Query: 234 LIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ S + R + IDY + ++ + D Sbjct: 203 LNPKVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHALHERVTDCGV-------DYDIRA 255 Query: 289 GKRLSDHCPISIDY 302 ++ SDHCP+ I+ Sbjct: 256 MEKPSDHCPVWIEL 269 >gi|156386929|ref|XP_001634163.1| predicted protein [Nematostella vectensis] gi|156221243|gb|EDO42100.1| predicted protein [Nematostella vectensis] Length = 286 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 111/313 (35%), Gaps = 56/313 (17%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + A L PC RL W S + + + R+ S +L+ + Sbjct: 13 FRCATFNILAPCYN------RLRGWWSAWESSKPNLYMR-----RSQSIIDMLK---EQP 58 Query: 65 DADIVFLQE------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D + LQE + + + I + + +A+ Sbjct: 59 HLDAICLQEFWFNHDVEDLFESKL---GDKYRIL-----KLKRQGYKMD-----GLAI-- 103 Query: 119 KNVRVLQQSYPLLGAKD-SFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +L +S LLG + +F GNR A+ + + K++ + H+ S+C E Sbjct: 104 ----LLHRSASLLGVQSFNFDDYGNRVALLLHIALPDQDKQVILATTHI-SYCHNILDEY 158 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--S 233 S + + + ++ QK+ +P ++ GDFN + ++ + + S Sbjct: 159 VRM---SQVKKVVSGIDKFLKQKELHSIPVILTGDFN-----SPETNPVYQFVKGSGFAS 210 Query: 234 LIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKR 291 + +++ +K+ R + +DY + + +S + +D + Sbjct: 211 SYKVVNGREAGVT-HKDHRGRELSVDYIFYRNSGSCAISPKSSIMLPQQYNDQVWPEEFT 269 Query: 292 LSDHCPISIDYDF 304 +SDH I ++D Sbjct: 270 ISDHRMIMTEFDM 282 >gi|325109514|ref|YP_004270582.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324969782|gb|ADY60560.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 100/330 (30%), Gaps = 82/330 (24%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DI 68 ++ A+ +++++WN+ N RTT++ ++ + K L + D+ Sbjct: 12 SAVSSVHAEDIKVLTWNVE-----------SNRDNRTTNNPAVIARKLKLLQSTSGPYDL 60 Query: 69 VFLQEMG--SYNAVAKVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + L E+ S F + + F S + +D T Sbjct: 61 IGLTEVAASSAGTYTDAFAADGLEYRAFLSASGNTDRMLILVRDDRFT-------IEGNR 113 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + G F R+ + V + + HL N+ S Sbjct: 114 AEELQNDGGSILFPGGSARQPFVVTVTDSKNDDLTFRFMVNHLNRG-------NSNSR-- 164 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKI------NYLGNNDD------F 224 QQA+ L++W ++ +P V GD+N R + + D Sbjct: 165 ---QQQAKGLREWARRQT---LPVVAVGDYNFDFDFRNLTGNPSMSMFMRLDPAERGLFV 218 Query: 225 WKTIDPNDS-----LIRFPKEKD-----------SRCNANKNLRNKIPIDYFVMDQNAYK 268 W I PN + ++ + +D+ + A Sbjct: 219 WNWIIPNATFTVDGATDVTRKIKLDVTFTDSNWYDPQRDGFDDFRDSLLDFIFVAGPARN 278 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + ++ + D SDH P+ Sbjct: 279 WAARSNVIQLPGDFPD----NDHTSDHRPV 304 >gi|327537315|gb|EGF24049.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 275 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 97/306 (31%), Gaps = 40/306 (13%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + L + T + +++N+ L+ + LW R + + A Sbjct: 1 MLLFGGIGARTVVADESFTAMTYNVRYLNTHDRQDLW---SMRRSKVIETIAS------A 51 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+ LQE+ W + + + + Sbjct: 52 DVAGLQEVTVQQLHDIQEGTPEWTWYGVGRDDGKEGGEFAPIGYRHDRFEAMDHGTLWLS 111 Query: 127 SYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P + + A R +++ +++ + V++ H F +N S Sbjct: 112 ETPTVVGSKGWDAALPRTMTWMVLRRKLDRAEFLVINSH-----FDHRGQNAREQS---- 162 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + + Q+ + +P ++ GDFN + L + + K +D D + P Sbjct: 163 ---GRLVAAEVDQR-ATDLPVIVMGDFNAMPDSAPLKALQSGEKV-KLLDARDEVDGKPT 217 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHCPI 298 N K ++ ID+ +++ Y D ++ R SDH PI Sbjct: 218 GPTGTWNGFKAIQPDRRIDHVLVNDR---------VVVQEYRTLDPRTEAGRYASDHLPI 268 Query: 299 SIDYDF 304 +I D Sbjct: 269 AIRIDL 274 >gi|322834267|ref|YP_004214294.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] gi|321169468|gb|ADW75167.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] Length = 253 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 86/259 (33%), Gaps = 49/259 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVTGAHDVHSLHVESWPDTPHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G + NR + ++ G + V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVAG-------SENRGLLYCRIVPPQLGSPVHVICVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L + + Q + L DW+ P ++AGDFN D K Sbjct: 144 -----GLREAHRQA------QLKMLADWVNA-FPQGEPVLVAGDFN---------DWRQK 182 Query: 227 TIDP-NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 P ++ + ++P+ +D+ K + + + Sbjct: 183 ANRPLKVQAGLDEIFTRAKGRPARTFPVRMPL--LRLDRIYVKNANASAPAVLP------ 234 Query: 286 KSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 LRNWRHLSDHAPLSAEIHL 253 >gi|323494242|ref|ZP_08099354.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546] gi|323311405|gb|EGA64557.1| hypothetical protein VIBR0546_06792 [Vibrio brasiliensis LMG 20546] Length = 316 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 105/312 (33%), Gaps = 33/312 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 + + N+ E G ++ + R Q LDAD+V LQE+ S A Sbjct: 6 TLSFATANLFNFVEPPGAFYDFENIYEREAWQEKCRWTQQQLSQLDADVVGLQEVFSIEA 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP---LLGAKDS 136 ++ + + F + + + + AIA R + + P G + Sbjct: 66 TRELMAQIGYPHFATVD-SPAIEQEYIYSKPVVAIASRYPISHISPVTPPKEMSQGYQTQ 124 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--SLLSQQAQ----- 189 + ++ + ++ V HLKS +SLE LS Q + Sbjct: 125 LPSFSRQPIQAIIDVPDIGEVAVYVCHLKSQRATESLEAELEQPLIGRWLSAQQRGWEAL 184 Query: 190 WLKDWITQK-KESLVPFVIAGDFNRKINY----------LGNNDDFWKTIDPNDSLIRFP 238 L+ +I Q+ + +P V+ GDFN+ I+ + + + L + Sbjct: 185 MLRLFIQQQYQTHPIPTVLMGDFNQAISSDITGLLTQEVELQGNPLM--LKDSWRLFQLT 242 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRL 292 R + + +DY ++ Q + Y D + K+ Sbjct: 243 HPDAERQPTHYHFATGNILDYILLSQEFHPDSQYSLADVTDYRALDKHLINPSFEQDKQA 302 Query: 293 SDHCPISIDYDF 304 SDH +++ F Sbjct: 303 SDHAFVAVTVRF 314 >gi|308049374|ref|YP_003912940.1| endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] gi|307631564|gb|ADN75866.1| Endonuclease/exonuclease/phosphatase [Ferrimonas balearica DSM 9799] Length = 319 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 84/280 (30%), Gaps = 61/280 (21%) Query: 64 LDADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI+ QE+ S A+ + + W + + A+A R Sbjct: 48 MAPDIIGFQEVFSAAPLAALCEAQGLSHWAL-----APGQEEQDFIRRKPRVALASRYPI 102 Query: 121 V-RVLQQSYPL------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V Q P L FSR + + + + V+ +HLKS Sbjct: 103 VETATVQPNPELVKALGLAQPFHFSRQPLKARLHV---PGFSDVRVIVVHLKSPRAAWQP 159 Query: 174 ENTYSPSCSLLSQQA--QWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 + L Q+ L W + ++ +P VI GDFN Sbjct: 160 GERPLIADEELDQRVATPVLGRWASALQRSAEAAMLCLDLMNEQLRDPLPSVILGDFNGD 219 Query: 215 -----INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 + L ++ + L + ++D + N +D+ ++ Sbjct: 220 LGSDLLTLLQGGEEDAYRLQDAHDLALYQGDRDPT---HYWGANGSVLDHILLSAQ---- 272 Query: 270 LIQESFSEILYNEDDIKSRGKRL-----------SDHCPI 298 F + L D++ + L SDH P+ Sbjct: 273 -FNAGFGQSLAQVDEVVVWDRHLRFNDAEQDRMASDHAPV 311 >gi|170703616|ref|ZP_02894358.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170131473|gb|EDT00059.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 286 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 110/311 (35%), Gaps = 58/311 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+ WN+ + +GV D A+ L D D++ LQE+ Sbjct: 1 MRLIDWNVQWGRDADGVV-----------DLARTIAAARRLGDFDVLCLQEVTRGFGVLP 49 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSY 128 + +A + P + IF + + + ++ AIA R RVL+Q Sbjct: 50 GQPGPDQFTELAALLPG--YMIFEAIGADLPPLEPGASRRQFGNAIATRLPAGRVLRQLL 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCS 182 P D+ + R A+++ + + ++ HL+ + +D+L + +C+ Sbjct: 108 PWPA--DAGGPSMPRVALDVELTTPSGGLRIVTTHLEYYSARQRLAQVDALRARHREACA 165 Query: 183 LLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + Q ++ + +I GDFN +D + + ++P F Sbjct: 166 H-ADQPAPAENATGPFTATGQARDSIICGDFNSAFG----SDAYQRLLEPIADAPSFVDA 220 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--------GKRL 292 +R + D ++ + ++ D + R R Sbjct: 221 WVARHPGHTPPPTAGVYDTV-------QWSEGPLACDFVFVTDTLLPRVTRCEIDGDVRA 273 Query: 293 SDHCPISIDYD 303 SDH P+ ++ + Sbjct: 274 SDHQPVVLELE 284 >gi|84686218|ref|ZP_01014113.1| possible Endonuclease/Exonuclease/phosphatase fa [Maritimibacter alkaliphilus HTCC2654] gi|84665745|gb|EAQ12220.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacterales bacterium HTCC2654] Length = 343 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 99/346 (28%), Gaps = 69/346 (19%) Query: 24 VRLVSWNINT---LSEQEGVSLWKN------SVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 VR+ ++N+ L + G L + V R T L +DAD V + E Sbjct: 2 VRIATYNVEWFDGLFDDAGGMLEDSGWSGRHDVTRADQ-LTALGIVFTAMDADAVMIIEA 60 Query: 75 GSYNAVAKVF----------------------PKNTWCIFYSTERLINHSKRDSNNDIH- 111 N I + ++ D D Sbjct: 61 PDDNRTRSTVRALETFAHAYGLRARKALLGFRNATQQEIALLYNPDVFEARHDPQGDETG 120 Query: 112 ---TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-- 166 T A R V +S+ V L NG+ + ++ +H KS Sbjct: 121 KKGTRDAPRFDGVFRFDLDIDATPDLIRWSKPPLE--VALTNRENGRVLRLIGVHAKSKA 178 Query: 167 ---FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 D + + Q WL+ + ++ ++ GDFN L + Sbjct: 179 PHGASAPDEVMRLAIENRRKQMAQCIWLRQRVNDHLDAGDSLIVMGDFNDGPG-LDEYEK 237 Query: 224 FW------KTIDPNDSLIRFPKEKD-------------SRCNANKNLRN-KIPIDYFVMD 263 + + + +R + R + +DY ++ Sbjct: 238 LFGRSGIEIVLGEAGQTELYDPHARLAVSRRVGAMPVTARFWIHSEKRYLQALLDYIMVS 297 Query: 264 QN----AYKFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I F + + Y +++ SDH P+SID D Sbjct: 298 PDLLASKPDWRIWHPFDDPVCYRTIELREALLTASDHFPVSIDIDL 343 >gi|327191803|gb|EGE58803.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 263 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 95/310 (30%), Gaps = 78/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K+ A D + R Sbjct: 38 IDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQA----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V I+L + +++ + Y + + L+ + ++ + Sbjct: 91 FLEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLDYEE 144 Query: 204 PFVIAGDFNRKINYLGNND----DFWK----------------TIDPNDSLIRFPKEKD- 242 V+AGD+N +D W+ +R + Sbjct: 145 MLVLAGDYN---VIPEPHDCFDPKVWENDALFLPQTREAFRKLENLGLTDAVRATTDATQ 201 Query: 243 --------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N I ID+ ++ A + + + + ++ SD Sbjct: 202 LYSFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSD 251 Query: 295 HCPISIDYDF 304 H P+ +DF Sbjct: 252 HVPVIAYFDF 261 >gi|290963006|ref|YP_003494188.1| hypothetical protein SCAB_87261 [Streptomyces scabiei 87.22] gi|260652532|emb|CBG75665.1| putative secreted protein [Streptomyces scabiei 87.22] Length = 289 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 84/280 (30%), Gaps = 62/280 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 R+++WNI S+ + A + ++ LQE + Sbjct: 55 HPGRVMTWNI--------------CNPCDESNVDRAAEIAA-VAPQVIGLQEACVRDVER 99 Query: 80 VAK---VFPKNTWCIFY-----STERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYP 129 + + F + + Y S R + A+ + YP Sbjct: 100 IREYLETFHGLVYHVEYGSVLGSWSRCGGAPWKPGGFGQ----AILSAGPLTDRVGAEYP 155 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G++D R + + + G+ + + + HL + + Q Sbjct: 156 EGGSED-------RGYMAVTATVGGQPVRIFNTHL---------AQRRQEAIR--ADQVD 197 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + + + + ++ GDFN + WK D+ R P E C Sbjct: 198 VLAEEVARHDRA----IVVGDFN-AVPDSAELAPMWKVAKDADTACRPPSE--GACGLTT 250 Query: 250 NLRNKIPIDYFVMDQ----NAYKFLIQESFSEILYNEDDI 285 + + DY + L + S ++Y + D+ Sbjct: 251 DWQ--SKFDYVFLRGVSPLAQRVRLSESSDHNLVYADVDL 288 >gi|190891504|ref|YP_001978046.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|190696783|gb|ACE90868.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 263 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 94/310 (30%), Gaps = 78/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ K+ A D + R Sbjct: 38 IDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKSSPSEVNRGLPGDALDEQA----R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + + V I+L + +++ + Y + + L+ + ++ Sbjct: 91 FLEAVFTLPDTRILRVCCIYLPNGNPVETEKYPYKLA------WMERLRSFAAERLAYEE 144 Query: 204 PFVIAGDFNRKINYLGNND----DFWK----------------TIDPNDSLIRFPKEKD- 242 V+AGD+N +D W+ +R + Sbjct: 145 MLVLAGDYN---VIPEPHDCFDPKVWENDALFLPQTREAFRRLENLGLTDAVRATTDATR 201 Query: 243 --------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + N I ID+ ++ A + + + + ++ SD Sbjct: 202 LYSFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSD 251 Query: 295 HCPISIDYDF 304 H P+ +DF Sbjct: 252 HVPVIAYFDF 261 >gi|123473915|ref|XP_001320143.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121902942|gb|EAY07920.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 407 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 110/301 (36%), Gaps = 35/301 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVS-LWKNSVKRTTSDY---TLLRQYAKNLDADIVFL 71 + ++SWNI L+ + + S ++ + Y TL Q + DI+ L Sbjct: 118 PHNPQERVFSILSWNI--LASKVARRDFYPLSTEKCMATYYRDTLTAQIVDEIHPDIIAL 175 Query: 72 QEMGSYNAV--AKVFPKNTWCIFYSTER---LINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 QE + A +K F +N + + + + + + + T + + + +V + Q Sbjct: 176 QEFEARQASDWSKPFIENGYWVTVAPKGRYYTKKPADQLFVHGQATFVNLHRFDVLISQL 235 Query: 127 SYP----LLGAKDSFSRAGNRRAVELLVEINGKKIW---VLDIHLKSFCFLDSLENTYSP 179 YP L+ A D+ + + + V + K +L++H+K + E Sbjct: 236 FYPRDSKLVSADDTDIKGCDDVVLITAVRTHSKPSKNYIILNVHMK----FNDAEVRKRL 291 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + ++ + L ++ + ++ GDFN K N + + Sbjct: 292 AEIIMK---ETLN--FAHQQFKVFGIIVVGDFNDKTNSPTLQRFYDFKLSNIYDAFHSTV 346 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNA--YKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ ++ +N L Q+++ ++ I G SDH P Sbjct: 347 NTAIFQKDDA-----ARIDHILISKNIKVKSILSQDTYGQLAEAHPFIPCYGF-PSDHLP 400 Query: 298 I 298 I Sbjct: 401 I 401 >gi|218889810|ref|YP_002438674.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58] gi|218770033|emb|CAW25795.1| predicted extracellular nuclease [Pseudomonas aeruginosa LESB58] Length = 780 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 106/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 559 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F NR + + G+++ + HLKS C Sbjct: 560 YRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ +I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRSAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 770 >gi|227485102|ref|ZP_03915418.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] gi|227236935|gb|EEI86950.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] Length = 353 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 66/321 (20%) Query: 23 KVRLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++++WNI G + S + + + K ++ D++FLQE+ Sbjct: 54 PYKILTWNIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEV 113 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN--------------DIHTAIAVRKK- 119 + + + + N F ++ +N + + N +++ I + K Sbjct: 114 DADS--QRTYHINEVEYF---DKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKF 168 Query: 120 ---NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + QQ P + A L +E + K + ++++HL + +S N Sbjct: 169 EIESSYRYQQPVPHKWPVRLANLKRGFNASYLPIEGSDKYLVLVNVHLDA---YESGSNG 225 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DFWKT------ 227 Q + + ++T++ ++ GDFN+++ + W Sbjct: 226 RLA-------QTKQIIAFMTEEYNKGNYLIVGGDFNQELRKGYEANVPEGIWNPSPFPYD 278 Query: 228 -IDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNED 283 + N SR N N ID F++ N ++ + Sbjct: 279 YLTDNIKPTFDENTNSSRLNHKPYDPNDSYECIIDGFLVSDNVEVKSVKGQAIGFVN--- 335 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 SDH P+ +++ Sbjct: 336 ---------SDHNPVLLEFSL 347 >gi|332291109|ref|YP_004429718.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332169195|gb|AEE18450.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 341 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 95/301 (31%), Gaps = 57/301 (18%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++ +LV ++++++N+ + K +RT L+ Sbjct: 81 HIFSLVRIGGGEDIGDGTTLKVLTYNVRQFNIHGWSDEVK-VGERT---IQLISD----K 132 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + D+V QE + F E++ + + + K +V+ Sbjct: 133 NPDVVSFQE--------------YYPGFKPDEKVYPYEYKVMKSPS-------KSFGQVI 171 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 YP++ + + + + V ++H +SF +L N + L Sbjct: 172 FSKYPIINSGSLDFENTGNNGIYADIATATDTVRVYNMHFQSFSLSPNLANLQKENSKKL 231 Query: 185 --------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +Q + ++ + S P ++ GDFN D D+ + Sbjct: 232 LGRLGQAFEKQETQVAKFLNNEATSPYPVIVTGDFNNSATSYMYRK---VKGDKVDAFAK 288 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ID+ ++D ES + D+ LSDH Sbjct: 289 AGSGTGATFWFDII---PLRIDFILVD---------ESLPVTNFETYDVD-----LSDHK 331 Query: 297 P 297 P Sbjct: 332 P 332 >gi|330898293|gb|EGH29712.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 248 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ KV + + S + + D Sbjct: 30 LREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 89 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 90 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 139 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 140 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRRRAD---ASLQG 185 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 186 SGLHEVFVERFGA---PAKSFPARWPL--LCLDRIYVRNATSHRPKVLS------SRPWS 234 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 235 HLSDHAPLAVELTL 248 >gi|319777367|ref|YP_004137018.1| putative membrane nuclease a [Mycoplasma fermentans M64] gi|238809543|dbj|BAH69333.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318038442|gb|ADV34641.1| Putative membrane nuclease A [Mycoplasma fermentans M64] Length = 647 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 100/345 (28%), Gaps = 83/345 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSY 77 K+R+ WNI L E T+ +Y L ++L+ D++ L E + Sbjct: 316 AKSKIRIGMWNILNLYE-------------TSEEYKKYGLASVIEHLNLDVIGLIENKTK 362 Query: 78 NAVAKV-------FPKNTWCIFYSTERLINHS------KRDSNNDIHTA--IAVRKKNVR 122 + K N W + S + N + + I+ IA+ K Sbjct: 363 ASAQKFCEYLKKFTGNNNWELIASDNTIHNPKLAPTSKQHECPAFIYKKDKIAIEKFING 422 Query: 123 VLQQSYPLLGAKDSFSRAGN---RRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENT 176 Y + R + + + + HL S S E+ Sbjct: 423 KEWLGYDNSTFVVNEENNNLGYVRPPMGVKFKTLGPIQNNFTFVIDHLDSPGAAKSGESK 482 Query: 177 YSPSCSLLSQQAQW----------LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 S LLS+Q L DW Q+ + GD N K+ + Sbjct: 483 SS----LLSKQGAQEADEAYNLKNLMDWFDQQDGDNDDLIFVGDTNIKLGNQAT---AFS 535 Query: 227 TIDPN---DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------- 268 I + +L+ K+ S + + + P D N Sbjct: 536 EILKDQYYKALLTDSKQHKSSLSNSTWGKYSEPYDKIFTRTNLKYENANFFPLYDIFKDN 595 Query: 269 -----------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ + Y+ D+K +SDH PI D Sbjct: 596 ILKDYQTIEEWKTYVDTIRKKTYD-KDLKYIFHAISDHSPIYFDL 639 >gi|86749875|ref|YP_486371.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86572903|gb|ABD07460.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 276 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 67/311 (21%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +R+ +WN+N + +R L + D+V LQE+ Sbjct: 7 FEPTDNDMRIATWNVN------------SVRQR----LDHLVSWLNECAPDVVCLQEI-- 48 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 V + FP+ + ++ +A+ K L+++ P L D Sbjct: 49 -KCVDEAFPR-------EAIEALGYNVVTHGQKTFNGVALLSKYP--LEEATPRLAGDDD 98 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A R +E +V + + V ++L + ++S + Y L ++ L+ + Sbjct: 99 DTHA--RF-LEGVVSLKRGVVRVACLYLPNGNPVESEKYPYK-----LRWMSRLLE-YTQ 149 Query: 197 QKKESLVPFVIAGDFN--------RKIN-------YLGNNDDFWKTIDPNDSLIRFPKEK 241 Q+ ++ P ++AGDFN + + ++ + Sbjct: 150 QRLKTEEPLILAGDFNVIPQPIDVHNPAGWVDDALFRPQTRESFQALLGLGLTDALRAST 209 Query: 242 DSRC-------NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 D+ A +N ID+ ++ A L D ++ S Sbjct: 210 DAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQATDRLRNVGI-------DAYVRNWEKPS 262 Query: 294 DHCPISIDYDF 304 DH P+ D+D Sbjct: 263 DHVPVWADFDL 273 >gi|292490590|ref|YP_003526029.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] gi|291579185|gb|ADE13642.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] Length = 257 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 99/306 (32%), Gaps = 78/306 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 K+++ +WN+N+L R L + DI+ LQE Sbjct: 3 KLKIATWNVNSLR------------VRLPQVMDWLEAH----QPDILALQETKLSDGEFP 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSR 139 + F + YS ++ + +A+ ++ + + P L Sbjct: 47 QEAFGDMGYRAAYSGQKT------------YNGVAILCRQEPQDIMTDLPNL-------E 87 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + I +L++++ + + S + Y +KD++ + Sbjct: 88 DPQRRILGISLGD----IRLLNLYVPNGSEVGSEKYAYKLD------WLARVKDYLQEAL 137 Query: 200 ESLVPFVIAGDFN--------RK--------INYLGNNDDFWKTIDP--NDSLIRFPKEK 241 ++ GDFN + + + +D DS F +E Sbjct: 138 AEYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPEREALGEILDLGFQDSFRLFEQEG 197 Query: 242 DSRCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S RN ID ++ K L+ + ++ E R KR SDH Sbjct: 198 QSFSWWDYRGGAFRRNWGLRIDLILIS----KELVPKCTECVIDKE---PRRLKRPSDHA 250 Query: 297 PISIDY 302 P+ + Sbjct: 251 PVIATF 256 >gi|283833916|ref|ZP_06353657.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] gi|291070588|gb|EFE08697.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] Length = 253 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 78/263 (29%), Gaps = 57/263 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIH 111 LR+ + + ADIV LQE+ + V + + T R++ Sbjct: 33 LREAVRTVGADIVCLQEVLGAHEVHPLHVENWPDTTHYEFLADTMWSDFAYGRNAVYPQG 92 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFC 168 N + + +D A +R V ++ + + V+ +HL Sbjct: 93 -----HHGNAVLSRYPIEHFENRDVSVGASEKRGVLYCRIVPPMLSHPVHVMCVHL---- 143 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKINYLGNN 221 L + + Q L DW+ P V+AGDF N + + Sbjct: 144 ---GLREAHRQA------QLAMLADWVNAL-PEGEPVVVAGDFNDWRQKANHPLKANADL 193 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D+ + + +R + + +D + + Sbjct: 194 DEIFTR----------AHGRPARTFPVQFPLLR--LDRIYVKNANASTPTALALR----- 236 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 ------HWRHLSDHAPLSAEIHL 253 >gi|300939825|ref|ZP_07154463.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] gi|300455357|gb|EFK18850.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] Length = 253 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR +++ ADIV LQE+ +V P E + S + D + + A Sbjct: 33 LRDAVRSVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L L + + Q L +W+ + + ++AGDFN D Sbjct: 143 L-------GLREAHRQA------QLAMLAEWVNELPD-GELVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|222111827|ref|YP_002554091.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|221731271|gb|ACM34091.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 291 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 95/309 (30%), Gaps = 49/309 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 ++LV+WN +G D + QYA L D D++ LQE+ Sbjct: 1 MQLVTWNTQWCRGLDG-----------RVDPARIVQYAVALGDVDVLCLQEIAVNYPGLA 49 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V P F + + R ++ IA R +++ P Sbjct: 50 GSPGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNL---IATRLPVLQLQHHPLPY 106 Query: 131 LGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS------PSCSL 183 D+ R+ R L V+ + V+ HL+ + + + +C+ Sbjct: 107 P--PDAGVRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQ 164 Query: 184 LSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q+ Q L D + ++ P + GDFN + + + + + Sbjct: 165 AAQRPQGLADGSPFQPKAHTPHAVLCGDFNLQ-AHEPEYAMLAAALADEEGATAGQAGQP 223 Query: 243 S--RCNANKNLRNKIPIDYFVMDQNAYKF-------LIQESFSEILYNEDDIKSRGKRLS 293 + P + V DQ + +S + S Sbjct: 224 PLWDAWRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVTQA--S 281 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 282 DHQPVLLEL 290 >gi|330943652|gb|EGH45968.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi str. 1704B] Length = 245 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 87/254 (34%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ KV + + S + + D Sbjct: 27 LREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 86 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 87 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 136 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 137 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRRRAD---ASLQG 182 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 183 SGLHEVFVERFGA---PAKSFPARWPL--LCLDRIYVRNATSHRPKVLS------SRPWS 231 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 232 HLSDHAPLAVELTL 245 >gi|107103426|ref|ZP_01367344.1| hypothetical protein PaerPA_01004496 [Pseudomonas aeruginosa PACS2] Length = 780 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 106/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPSSRGANTAEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 559 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F NR + + G+++ + HLKS C Sbjct: 560 YRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ +I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRSAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 770 >gi|313109336|ref|ZP_07795300.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016] gi|310881802|gb|EFQ40396.1| putative extracellular nuclease [Pseudomonas aeruginosa 39016] Length = 780 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 106/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 446 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTVEEFQRQKAKIVAAILASKADI 505 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 506 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 559 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F NR + + G+++ + HLKS C Sbjct: 560 YRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 619 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L DW+ +I GD +N D Sbjct: 620 GDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 674 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 675 VIRGAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 734 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 735 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 770 >gi|190575134|ref|YP_001972979.1| putative endonuclease/exonuclease/phosphatase family secreted protein [Stenotrophomonas maltophilia K279a] gi|190013056|emb|CAQ46688.1| putative endonuclease/exonuclease/phosphatase family secreted protein [Stenotrophomonas maltophilia K279a] Length = 294 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 84/269 (31%), Gaps = 42/269 (15%) Query: 38 EGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEM-------GSYNAVAKVFPK 86 G+S+ ++ D+ R+ K L D V LQE+ +A Sbjct: 44 PGMSMVTFNLHHDREDWPRRRRTILAELKRLQPDAVALQEVIQRRNVRNQAQWLASQLG- 102 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 +F ST+ + + A+ + + Q + L D + A R Sbjct: 103 -YKYVFVSTDAVGAPKRY--------GNALLTRRPILAQGDHLLQPLDDYRTVAHLR--- 150 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 ++++G + V HL E + + Q + L +I+ + P V Sbjct: 151 ---IDVDGTPVNVYATHL--------NERSDESGQRIRRSQVEDLLRFISA-TSAGAPVV 198 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 IAGDFN ++ ++ D S+ + ID+ Sbjct: 199 IAGDFNALVDAGDLSELRSHYGDSYGSVHVNTDLSGVSTLNRHYYQAPSRIDHIFF---Q 255 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++ + DD SDH Sbjct: 256 QDEMVAREAKILFDQPDDSGRWA---SDH 281 >gi|254524231|ref|ZP_05136286.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] gi|219721822|gb|EED40347.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] Length = 295 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 38/241 (15%) Query: 62 KNLDADIVFLQEM-------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 K L D V LQE+ +A +F ST+ + + Sbjct: 73 KRLQPDAVALQEVIQRRNVRNQAQWLASQLG--YRYVFVSTDPVGAPKRY--------GN 122 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ + + + L D + A R ++++G + V HL E Sbjct: 123 ALLTRRPILAHGDHLLQPLDDYRTVAHLR------IDVDGTPVNVYATHL--------NE 168 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + Q + L +I+ + P VIAGDFN ++ ++ D S+ Sbjct: 169 RNDERGQGIRRSQVEDLLRYIST-TSAGAPVVIAGDFNALVDAGDLSELRSHYGDSYGSV 227 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ ++ +L+++ D R SD Sbjct: 228 HVNTDLAGVSTLNRHYYQAPSRIDHIFF---QQDEMVAREAK-LLFDQPDDSGRWA--SD 281 Query: 295 H 295 H Sbjct: 282 H 282 >gi|121608305|ref|YP_996112.1| endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] gi|121552945|gb|ABM57094.1| Endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] Length = 245 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 74/194 (38%), Gaps = 31/194 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S+NI + + L + LDADIV LQE+ + Sbjct: 7 LRVASYNI--------HKGVQGIGPGRRLEIHNLGLAIEQLDADIVCLQEV--RKLHRR- 55 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSF---S 138 + + + + ++ AV ++ L +P++G + Sbjct: 56 --EQAYFQRWPELPQAQFLAPEGYEAVYRTNAVTRHGEHGNALLSRWPVIGHQHQDLSDH 113 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R R + + ++++G+ + V+ +HL S +Q + L+ +I ++ Sbjct: 114 RFEQRGLLHVQLDVHGRPLHVIVVHL--GLIAGSR-----------MRQIERLQGFIERE 160 Query: 199 KESLVPFVIAGDFN 212 S P V+AGDFN Sbjct: 161 VPSAAPLVVAGDFN 174 >gi|146276446|ref|YP_001166605.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] gi|145554687|gb|ABP69300.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] Length = 339 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 101/347 (29%), Gaps = 72/347 (20%) Query: 21 AQKVRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDAD----- 67 Q++R+ ++N+ + + + R + L LDAD Sbjct: 2 GQRLRIATYNVEWFNALFDDRGRLLADNELSGRYEITRRNQIESLGIVFTALDADAIMVI 61 Query: 68 -----------IVFLQ------EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + L+ E+ + A+ + I + ++ D Sbjct: 62 EAPNHGRRRSTVKALETFARTFELRASQAIMGFANETDQEIALLFDPSRIEARHDPQAGP 121 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FC 168 A R + FS+ EL V +G + ++ +H KS Sbjct: 122 K---APRFDGIFRFDIDVDAAPEAIRFSKPPL----ELAVRADGHALRLIGVHAKSKAGR 174 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKES----LVPFVIAGDFNRKINYLGNNDDF 224 + + QQ WI ++ + ++ GDFN L + Sbjct: 175 GARNGAEEVRIAIQNRRQQLAEC-VWIRRRVAALLARHQSVMVMGDFNDGPG-LDEYEKL 232 Query: 225 WK--------------TIDPNDSLIRFPKEKDSRCNANK--------NLRNKIPIDYFVM 262 + + ++ R + + + + +D+ ++ Sbjct: 233 FGHSGVEIVLGLDEPPELRLHEPHARMALTQRVGVQPSSARFWLAPEDQYFEALLDFIMI 292 Query: 263 DQN----AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ I ++ + +++ SDH P+++D + Sbjct: 293 SPDLAEKGPRWRIWHPLNDPNCFRIPELQEALLAASDHFPVTLDIEL 339 >gi|260575902|ref|ZP_05843897.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] gi|259021828|gb|EEW25129.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] Length = 353 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 113/359 (31%), Gaps = 78/359 (21%) Query: 16 CTASVAQKVRLVSWNINTLS---------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 A Q++R+ ++N+ + ++ + V R T + +DA Sbjct: 3 TAAPAPQRLRIATYNVEWFNGLFDNHGHLLEDAEPSARYQVTRGEQ-LTAIAIVMTAMDA 61 Query: 67 DIVFLQEM-------GSYNAVAKV--------------FP-KNTWCIFYSTERLINHSKR 104 D V + E S A+ + FP + I + + Sbjct: 62 DAVMVIEAPDTNGKRSSVKALERFAAHYGLRTSRAVTGFPSETEQEITLLYDPARLTPRH 121 Query: 105 DS-----NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 D ++ T R V FS+ AV L NG+ + + Sbjct: 122 DPMGEPPGHNPVTD-EPRFDGVFRYDLDTDATPETIRFSKPPLELAVTL---ANGRALRL 177 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKD--WITQKKE----SLVPFVIAGDF 211 + +H+KS + + L+ + + L W+ ++ E + ++ GDF Sbjct: 178 IGVHIKS---KSPYGARGEAAITRLAIENRRKQLAQCVWLRRRVEGHLGAGESLIVLGDF 234 Query: 212 N---------RKINYLG-------NNDDFWKTIDPNDSLIRFPKEKDSRCNAN-----KN 250 N R + G + D + DP+ + + + A + Sbjct: 235 NDGPGLDEYERLFGHSGIEVVLGHDADPALQLYDPHARMALTQRMGMAATTARFYLAPQK 294 Query: 251 LRNKIPIDYFVMDQN----AYKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 + +D+ ++ + + I ++ +++ SDH P+++D Sbjct: 295 RYFEALLDFIMVSPDLVAAGPDWRIWHPLNDPGCLKVPELREALLAASDHFPVTLDLPL 353 >gi|82776137|ref|YP_402484.1| hypothetical protein SDY_0813 [Shigella dysenteriae Sd197] gi|309786554|ref|ZP_07681177.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 1617] gi|81240285|gb|ABB60995.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308925617|gb|EFP71101.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 1617] Length = 253 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIA 115 LR + + ADIV QE+ +V P E + S + D + + A Sbjct: 33 LRDAVRTVSADIVCQQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L +L + + Q L +W+ + + P ++AGDFN D Sbjct: 143 L-------ALREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DW 179 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + E +R + + +D+ K + + + Sbjct: 180 R-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP---- 234 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 235 --LRTWRHLSDHAPLSAEIHL 253 >gi|16263840|ref|NP_436632.1| hypothetical protein SM_b20092 [Sinorhizobium meliloti 1021] gi|15139964|emb|CAC48492.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021] Length = 252 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 46/257 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + D++ LQE+ A + + + + + D Sbjct: 30 DPARIAAVIAECQPDVIALQEVDVGRA--RTGGIDQAHMIATHLNMEAEFHPALHLEDEK 87 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AV L ++ PL S + R A+ + +++ K+ V+ HL Sbjct: 88 YGDAVLTALPMRLIKAAPLP------SSSEPRGALWVEIDVAAVKLQVIVTHL--GLRGA 139 Query: 172 SLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWK 226 +QA L W+ + V+AGD N R Y + Sbjct: 140 ERL-----------RQATALLGPGWLGGMAQGDAHVVLAGDLNATGRSTAYRL----LAR 184 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + K ++ + ID+ ++ + E+ Sbjct: 185 QLS---DAQLLTGVKPRPTFPSRLPLLR--IDHVLVGKGI----------EVASCRVHGS 229 Query: 287 SRGKRLSDHCPISIDYD 303 + + SDH P+ + D Sbjct: 230 TLARSASDHLPLLAELD 246 >gi|255263333|ref|ZP_05342675.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] gi|255105668|gb|EET48342.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] Length = 399 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 83/254 (32%), Gaps = 66/254 (25%) Query: 25 RLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + S+N+ L ++QE K + + L +DADIV QE+ +A+ Sbjct: 5 TIASFNVKNLIGADQEYYKFEKYTPEEHAWKEDWLADQLLTMDADIVGFQEIFDEDALRM 64 Query: 83 VFPK-NTWCIFYSTERLINHSKRDSNNDIHT----------------------------A 113 + + + I + + + SKR + I Sbjct: 65 LIDETDRLGILSNEASIPDRSKRYARKAIFRKLAFTPYADAALVFAPNANDGKPGHRRPG 124 Query: 114 IAVR-----KKNVRVLQQ-------SYPLLGAKDSFSRAGNRRAVELL---VEINGKKIW 158 +A+ K VLQ+ + L D R + +L V + I Sbjct: 125 VAILSRYGFKGQPEVLQELDEPLHIPFQDLDGSDGGHYTIKRISRPILKARVPVGDAVIT 184 Query: 159 VLDIHLKS----FCFLDSLENTYSPSCSL--------------LSQQAQW--LKDWITQK 198 V + HLKS F + + L + A+ L+D I + Sbjct: 185 VFNCHLKSKLGEFPRPAGQPHAPEADLTQYDAVGRSMGALRAGLRRMAEAWVLRDAIVSE 244 Query: 199 KESLVPFVIAGDFN 212 E+ P ++ GDFN Sbjct: 245 IEAGNPVMVLGDFN 258 >gi|194289407|ref|YP_002005314.1| exodeoxyribonuclease iii [Cupriavidus taiwanensis LMG 19424] gi|193223242|emb|CAQ69247.1| EXODEOXYRIBONUCLEASE III [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 88/325 (27%), Gaps = 87/325 (26%) Query: 13 LVPCTASVAQKVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + +R+ SWN + L+EQE Sbjct: 1 MSATGLPGQGPLRIASWNVNSLKVRLPQVLQWLAEQEQAGAPI----------------- 43 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D + LQE+ P + + + + + I+T Sbjct: 44 -----DALCLQELK--------LPDDKY--------PLAELENAGFHSIYTGQKTYNGVA 82 Query: 122 RVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +L + + G D G A + ++ + ++ + + LDS + Y Sbjct: 83 -ILARDASMPGPVDVVRNIPGFEDAQQRVIAATYGDLRLVCAYFPNGQSLDSDKFAYK-- 139 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFP- 238 Q + + W+ ++ + GDFN +D W+ + R Sbjct: 140 ----LQWLEAMTAWLREEMARHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPERAAF 195 Query: 239 ------------KEKDSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSE 277 ++ + A ++ ID+ ++ + Sbjct: 196 AALLELGLADAFRKFEQPEKAFSWWDYRMLAFRRNAGLRIDHILLSPALAEQCTACVI-- 253 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 D + ++ SDH P+ Sbjct: 254 -----DRVPRTWEQPSDHTPVVATL 273 >gi|145545333|ref|XP_001458351.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426170|emb|CAK90954.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 90/284 (31%), Gaps = 44/284 (15%) Query: 52 SDYTLLR------QYAKNL---DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS 102 +D+ L+ + L +ADI+ LQE+ + + I Y + Sbjct: 54 ADFQNLKFLNRSTKIIDQLKNFNADILCLQEVDNIEFYQDNIKNLQYDICYCQRPQRSDG 113 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + + L Q G + R + V L + K+ + +I Sbjct: 114 CLIAFKIEK--FKILISQEYSLDQLALDYGLPLQYLRQNVFQIVRLEHLLTKKQFIIGNI 171 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNR-----KIN 216 H F + ++ Q L ++ QK+ + GDFN I Sbjct: 172 HT----FWNPNQDDLK------FFQIVQLVQFMEAQKESEDQILIFCGDFNSLPKSNPIQ 221 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEK-----------DSRCNANKNL-----RNKIPIDYF 260 Y+ N+ + I+ + + I+ + +S + K IDY Sbjct: 222 YIQKNNPIVERIEMSTNQIKLQNDIFQHYGPPKLNWESAYHPFPTFTNYTNNFKGCIDYI 281 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 NA I ++ L ++ SDH PI +DF Sbjct: 282 YY-HNAKVEKILSIPNQSLLQKEVALPNSNFPSDHVPILAYFDF 324 >gi|330976189|gb|EGH76251.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 233 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ KV + + S + + D Sbjct: 15 LREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 75 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 124 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L + QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 125 -GLRENHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRRRAD---ASLQG 170 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 171 SGLHEVFVERFGA---PAKSFPARWPL--LCLDRIYVRNATSHRPKVLS------SRPWS 219 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 220 HLSDHAPLAVELTL 233 >gi|270003873|gb|EFA00321.1| hypothetical protein TcasGA2_TC003159 [Tribolium castaneum] Length = 398 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 102/310 (32%), Gaps = 60/310 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 S +R+ WNI LS+ G V +++ + + ++ + + DI+ L Sbjct: 102 VSSPYSLRVFQWNI--LSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVE-YCPDIICL 158 Query: 72 QEMGSYNAVAKVFPKNTWC-----------IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 QE+ +N + + + ++ S + + I + + Sbjct: 159 QEVDHFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRI 218 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYS 178 + + + + A R ++ G+++ V HLK+ FL +L N Sbjct: 219 LEIWRVQSNQVALL-----ANLR------IKETGQEVCVTTTHLKARQGAFLSTLRN--- 264 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSL 234 +Q + L +++Q P VI GDFN I +D++ Sbjct: 265 -------EQGKDLLQFVSQH-CGPRPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADC 316 Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 +R + + IDY + L + EI ED + Sbjct: 317 DSSSANSAAREPPYTTWKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEI--GEDRV 374 Query: 286 KSRGKRLSDH 295 S SDH Sbjct: 375 PSFSY-PSDH 383 >gi|189235069|ref|XP_974729.2| PREDICTED: similar to nocturnin CG31299-PE [Tribolium castaneum] Length = 397 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 102/310 (32%), Gaps = 60/310 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEG------VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 S +R+ WNI LS+ G V +++ + + ++ + + DI+ L Sbjct: 101 VSSPYSLRVFQWNI--LSQALGQMNDHFVKCPDEALEWNSRKFRIIEEIVE-YCPDIICL 157 Query: 72 QEMGSYNAVAKVFPKNTWC-----------IFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 QE+ +N + + + ++ S + + I + + Sbjct: 158 QEVDHFNFLKYILGTQGYTGVFYPKPDSPCVYISGNNGPDGCAIFYRTNKFDVINIESRI 217 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYS 178 + + + + A R ++ G+++ V HLK+ FL +L N Sbjct: 218 LEIWRVQSNQVALL-----ANLR------IKETGQEVCVTTTHLKARQGAFLSTLRN--- 263 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSL 234 +Q + L +++Q P VI GDFN I +D++ Sbjct: 264 -------EQGKDLLQFVSQH-CGPRPVVICGDFNAEPIEPIYSTILSDEYLNLGSAYADC 315 Query: 235 IRFPKEKDSRCNANKNLRNK------IPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 +R + + IDY + L + EI ED + Sbjct: 316 DSSSANSAAREPPYTTWKIRDEGEVCHTIDYIFYKKGCLEVEAVLELPTGEEI--GEDRV 373 Query: 286 KSRGKRLSDH 295 S SDH Sbjct: 374 PSFSY-PSDH 382 >gi|319948930|ref|ZP_08023037.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] gi|319437410|gb|EFV92423.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] Length = 284 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 92/314 (29%), Gaps = 61/314 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYN 78 A + + + N+N + +R+ ++ L + ++ AD+V LQE+ + Sbjct: 2 AAVSLTVSTVNVN--------GIRAAVKQRSETNLGFL-PWLESSGADVVALQEVRADED 52 Query: 79 AVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K W + S + + + + + + P Sbjct: 53 QTRKALAPALDAGWHLIGSASSMKGRAGVALLSRQ-------ESSDVCVGYGDPEFAESG 105 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + A AV +G+ + V ++L S ++ + + Sbjct: 106 RYIEAVYPGAV------DGETVTVASLYLPSGSANTPKQDEKDRFLKTFREFLA--ERAA 157 Query: 196 TQKKESLVPFVIAGDF--------------NRKINYLGNNDDFWKT---IDPNDSLIRFP 238 K +I GD+ N K + ++ W T D + Sbjct: 158 ELKSREGHEMIICGDWNIAHREEDLKNHKGNHKSSGFLPHEREWMTDVFADGSGWTDIVR 217 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY V+ +++ D ++ Sbjct: 218 HRRPDEVGPYSWWSQRGKAFDNDAGWRIDYQVVSDGLVDRAVKDWV-------DRAEAYD 270 Query: 290 KRLSDHCPISIDYD 303 R SDH P+++ Y+ Sbjct: 271 MRWSDHAPVTVVYE 284 >gi|332291511|ref|YP_004430120.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] gi|332169597|gb|AEE18852.1| Endonuclease/exonuclease/phosphatase [Krokinobacter diaphorus 4H-3-7-5] Length = 327 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 84/263 (31%), Gaps = 43/263 (16%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKN-----TWCIFYSTERLINHSKRDSNNDIHTAIAV 116 ++ + E+ + + + + + + I H I A+ Sbjct: 73 TKTSPSLLGVAEVENRSVLESLIATDNLKDEGYDIV--------HYDSPDERGIDVALLY 124 Query: 117 RKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K + +V + L + R R + + E+ G + +L H S ++ + Sbjct: 125 KKADFKVTASEPITLYLEAEEGGRDYTRDILYVQGELLGNPVHILVNHWPSRRSGENETS 184 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + ++ + + + ++ V +I GDFN + ++ KT N L Sbjct: 185 QKRITAAQRNR--EVIDKLMN--EDHKVKIIIMGDFNDGPHSESVKNNLVKTEFYNPMLY 240 Query: 236 RFPKEKDSRCNANKNLRNKIPI-DYFVMDQN-----AYKFLIQES--------------F 275 + + S N R + I D + N L ++S F Sbjct: 241 LGTRYEGS-----LNYRFEWFIFDQIIFSNNFVQLHENTLLYEKSDIYNDFFLTEYEGKF 295 Query: 276 SEILYNEDDIKSRGKRLSDHCPI 298 + K SDH P+ Sbjct: 296 KGTPFRTYAGKRYLGGYSDHFPV 318 >gi|313203809|ref|YP_004042466.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312443125|gb|ADQ79481.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 313 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 100/296 (33%), Gaps = 44/296 (14%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-AD--I 68 L+ + ++++SWNI L +SL+ ++ R R A L+ +D I Sbjct: 25 LLMDTPDLGTKPLKILSWNIYML---PYISLFNHNADRA-------RVIADKLEFSDYQI 74 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + QE F I + N + V + Sbjct: 75 IVFQE---------AFSSKCRNILAKRLAKEYPYQYGPANKCYWPFRTSSGLWVVSKMPL 125 Query: 129 PLLGAKDSFSRAG-----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L +G + AV + G + +L HL++ D+ E + C Sbjct: 126 KQLAKIKFTEGSGFDIIARKGAVLFQGDFEGTRFQLLATHLQA----DNSEKIRAKQCRE 181 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPK 239 + + + + +P +I GDFN +++ N T++ N+ L ++ Sbjct: 182 IKEHL------LNEFYNPNIPQLICGDFNIEMDDRVNYQRMLSTLEANNGLISGEVKCTY 235 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++ A K IDY ++ + LI ++ I + LSDH Sbjct: 236 DEIDNNLARNAQGEKKVIDYILVRN---EQLIHRIERKVHTFYARIGEKSSNLSDH 288 >gi|145548597|ref|XP_001459979.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124427806|emb|CAK92582.1| unnamed protein product [Paramecium tetraurelia] Length = 280 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 83/261 (31%), Gaps = 61/261 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + + D V LQE+ + I S ++ I + T ++ Sbjct: 64 KIIQQNNCDFVCLQEV-----------TRDFQIMMSNDKFIQSTY------FITGNVIKG 106 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + +L + P + F+ R + L +ING + V HL+S + + Sbjct: 107 YGILILSKFKPTFIIELPFNSQFGRTFLYLECQINGHSLVVGTSHLESMVYNEQARYD-- 164 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---------DFWKTID 229 L + L+ + +I GDFN D D WK + Sbjct: 165 ----QLQTTYKELEKY--------KNVIIMGDFN----LETQKDEQSISPQYADLWKQLY 208 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM----DQNAYKFLIQESFSEILYNED-- 283 P++ F + K D ++ A I + LY ++ Sbjct: 209 PDNPGYTFIID-----------DFKRRFDRILLKKGGSYQASNIEILGTKEIPLYKDNKP 257 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 +K K SDH + + + Sbjct: 258 SMKGEVKTPSDHYALKLHLQY 278 >gi|299532507|ref|ZP_07045897.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] gi|298719454|gb|EFI60421.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] Length = 291 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 94/318 (29%), Gaps = 67/318 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DIVFLQEM---- 74 + +++WN+ +G+ + ++A + D++ LQE+ Sbjct: 1 MNILTWNVQWCCGMDGLVSV-----------ERIVRHALQMGEQSGGLDVLCLQEIAVNY 49 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + + P W IF+ S ++ IA R + V Sbjct: 50 PDLQGRPGDQLAELKALLPG--WQIFFGASVDEFTSSGHQRFGNL---IATRLPVLLVQH 104 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P+ D R R + V+ + ++ HL+ F + + L Sbjct: 105 YLLPMPAQADM--RCMQRMCSVVTVDDAALGPVRIMTTHLEY--FSARQRMAQAGALRAL 160 Query: 185 SQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDP---ND 232 QA L D Q P+ V+ GDFN ++ + + Sbjct: 161 QMQACALADAPPQPASDGSPYQTKPHTRHAVLCGDFN-----FEPHEPEYAVLSAPWVAG 215 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK-- 290 + P + ++D + + ++++ D + R Sbjct: 216 EEGCLQAGQWRNSWDVLYPGQPQPPTFRLVD---RTWGAEPGACDLIWVSDSLCQRVHTW 272 Query: 291 ------RLSDHCPISIDY 302 + SDH P+ + Sbjct: 273 SVDSATQASDHQPVMLTL 290 >gi|289663955|ref|ZP_06485536.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667545|ref|ZP_06488620.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 288 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 100/298 (33%), Gaps = 39/298 (13%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + ++ KR T + K Sbjct: 17 ILALCITLPAFAASAPSPLRVMSFNVR-------VPVDRDGDKRWAVRRTSMVALIKQTH 69 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 70 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSEEHMGVFYDSNALSVIESGDFWLS 129 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++ P + S++ R L E + ++ ++L+ HL + + Sbjct: 130 ET-PEVPGSSSWNTDLPRMVTWALFERRSDKRRFYLLNTHL---------PHRDQDEAA- 178 Query: 184 LSQQAQWLKDWITQKKE---SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 +Q + I + + +P V+ GDFN + ++T+ L Sbjct: 179 -REQGARV---ILSRIATLPADIPVVVTGDFN-----SDPDQGTYRTLTAV--LGDARAH 227 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K + D+ +++ + ++ D++ G SDH P+ Sbjct: 228 VAKPQGPEKTFQ-----DFTTQPTRRIDWILFRGLTPTRFSTLDMRPGGILPSDHYPV 280 >gi|238020559|ref|ZP_04600985.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147] gi|237867539|gb|EEP68545.1| hypothetical protein GCWU000324_00445 [Kingella oralis ATCC 51147] Length = 240 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 62/290 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNL-DADIVFLQEMGSYN 78 +R++S+NI + + R + + +L A+ + D D+V LQE+ + Sbjct: 2 MRILSYNIQAAIASTSYLSYALRLHRQVLPSPAKRQVLADIARFISDFDVVCLQEID-FG 60 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + S + R N+ + + + + S Sbjct: 61 GLRNGFLSQAQQLL----AQTPFSHSVWQVNRVVGKLSRHGNLILSKSPMREVVNEPLPS 116 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + R + VE ++ V ++HL +Q + ++ QK Sbjct: 117 KIKGRGMLAAEVETARGRLVVANVHLSLGAVDQF-------------RQIR----FVRQK 159 Query: 199 KESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + GDFN ++ L ++D T+D P Sbjct: 160 LAAFENVCLMGDFNCPPDAEQLCLLTDHDYARLTLDSPTYPSWKP--------------- 204 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K +D+ + + F+ SDH P+ ++ D Sbjct: 205 KQSLDHIFVKGSLKGACHVSQFAA---------------SDHLPVVLEVD 239 >gi|323358932|ref|YP_004225328.1| extracellular nuclease [Microbacterium testaceum StLB037] gi|323275303|dbj|BAJ75448.1| predicted extracellular nuclease [Microbacterium testaceum StLB037] Length = 1293 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 89/305 (29%), Gaps = 58/305 (19%) Query: 44 KNSVKRTTSDYTLLRQYAKN-------LDADIVFLQEMGSYNAVAKV------------- 83 R ++ L++ ++A++V L+E+ + A+ K Sbjct: 317 PEPGPRGAANDENLQRQQAKIVAALNAMEAEVVSLEEIENSAALGKPRDEALSTLVDALN 376 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ W S L S + I TA +K V + S L + +R Sbjct: 377 ADLGEDAWAFVPSPTALP-----ASEDVIRTAFIYKKAAVSPIGASVILDDPAFANARQP 431 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS------QQAQWLKDWI 195 +A + + H KS D + + + +QA+ L + Sbjct: 432 LAQAFA-PAGSDEAAFVAIVNHFKSKSDSDPAAEGDNAAGDQGAFNGDRVRQAEALVAFA 490 Query: 196 TQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ ++ + GDFN D + + D+ Sbjct: 491 GERAKTVDGGAVFLLGDFN----AYAQEDPI-QVLRDAGYADL---GADTGTYTYSFSGQ 542 Query: 254 KIPIDYFVMDQNAYKFLI-----------QESFSEILYNEDDIKSRG---KRLSDHCPIS 299 +D+ + A + + + YN + R SDH P+ Sbjct: 543 SGSLDHVLASPAARELVTGTDIWNINAGEALALEYSRYNANVRSFYDASPYRSSDHDPVV 602 Query: 300 IDYDF 304 + D Sbjct: 603 VGLDL 607 >gi|260428188|ref|ZP_05782167.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] gi|260422680|gb|EEX15931.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] Length = 304 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 65/312 (20%) Query: 14 VPCTASVAQKVRLVSWNINT--LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 P A +R+ + N++ L +R + L L AD++ Sbjct: 33 APLPEPHADTLRVATLNVHYIDLRSGGEGPWSLAGWERRKA---ALGDTVAALKADVIAF 89 Query: 72 QEMGSY-------------NAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTA 113 QEM S+ + ++ W F ST+ + + R D Sbjct: 90 QEMESFRGGDDDSDNLARGYLLGRLPGFEAAATGDWRSFPSTQPIFYRTDRLRLEDQGWF 149 Query: 114 IAVRKKNV---RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 V R S+P + F+ G G++ ++++HL+ Sbjct: 150 FFSETPEVIYSRTFDGSWPAFASWAEFTPVG-----------GGQRFRLVNVHLE----Y 194 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S N + + + +T ++ P ++AGD N + + Sbjct: 195 RSASNRRRSA--------ELIARRLTAVIDAGTPVILAGDLN-----ALRGWRVMRILQD 241 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 +RFP+ + + N+ + ID+ + L Y ++ G Sbjct: 242 AG--LRFPRVPAATYHLNRGVHLLPAIDHIGLAG-----LDATGG---PYVPQ-MQPGGV 290 Query: 291 RLSDHCPISIDY 302 +DH P+ +D Sbjct: 291 WPTDHHPVVLDL 302 >gi|237730766|ref|ZP_04561247.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906305|gb|EEH92223.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 253 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 82/256 (32%), Gaps = 43/256 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIH 111 LR+ + + ADIV LQE+ + + + + T R++ Sbjct: 33 LREAVRTVGADIVCLQEVMGAHEAHSLHIENWPDTSHYEFLADTMWSDFAYGRNAVYPQG 92 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFC 168 N + + +D A +R V ++ + I V+ +HL Sbjct: 93 -----HHGNAVLSRYPIEHYENRDVSVGASEKRGVLYCRIVPPMLSHPIHVMCVHL---- 143 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 L + + Q L DW+ ++ P VIAGDFN D +T Sbjct: 144 ---GLREAHRQA------QLAMLADWVNALPDA-EPVVIAGDFN---------DWR-QTA 183 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + E +R + + +D+ K + + + Sbjct: 184 NRPLKAKAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNANASTPTTL------ALRH 237 Query: 289 GKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 238 WRHLSDHAPLSAEIHL 253 >gi|289628537|ref|ZP_06461491.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649841|ref|ZP_06481184.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 2250] gi|330870432|gb|EGH05141.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 380 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 105/321 (32%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ E + N H + T Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 187 SRFHIDSAERVQLPVPDANIISRQFQPKDALLISYLPLRDGGKLAVINTSLT-------- 238 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 239 --TARHAGDTAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPKEQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 297 SELHELWEK------YPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|264677073|ref|YP_003276979.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|262207585|gb|ACY31683.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] Length = 307 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 98/321 (30%), Gaps = 69/321 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-----DIVFLQEM-- 74 K+ +++WN+ +G+ + ++A + D++ +QE+ Sbjct: 15 DKMNILTWNVQWCCGMDGLVSV-----------ERIVRHALQMGEQSGGLDVLCMQEIAV 63 Query: 75 ----------GSYNAVAKVFPKNTWCIFY--STERLINHSKRDSNNDIHTAIAVRKKNVR 122 + + P W IF+ S + + N I T + Sbjct: 64 NYPDLQGRPGDQLAELKALLPG--WQIFFGASVDEFTPRGHQRFGNLIAT------RLPV 115 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSC 181 +L Q Y L ++ R R + V+ + ++ HL+ F + + Sbjct: 116 LLVQHYLLPMPAEADMRCMQRMCSVVTVDDAALGPVRIMTTHLEY--FSARQRMAQAGAL 173 Query: 182 SLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDP-- 230 L QA L D Q P+ V+ GDFN ++ + + Sbjct: 174 RALQMQACALADAPPQPASDGSPYQTKPHTRHAVLCGDFN-----FEPHEPEYAVLSAPW 228 Query: 231 -NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + P + ++D + + ++++ D + R Sbjct: 229 VAGEEGCLQAGQWRNSWDVLYPGQPQPPTFRLVD---RTWGAEPGACDLIWVSDSLCQRV 285 Query: 290 K--------RLSDHCPISIDY 302 + SDH P+ + Sbjct: 286 HTWSVDSATQASDHQPVMLTL 306 >gi|319779595|ref|YP_004130508.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] gi|317109619|gb|ADU92365.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] Length = 260 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 78/309 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 + + SWN+N+L+ R LR++ D D++ LQE M S Sbjct: 3 TLTVASWNVNSLN------------VRLDQVLDWLREF----DVDLLCLQELKMESQKID 46 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR 139 + +F + I+ + +A + K + L ++ P Sbjct: 47 SSLFESIGYGIY------------ALGQKTYNGVALISKHPITDLVENLPNYEDPQKRLL 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 AG + I+ K++ +++++ + L+S + +Y + L+ +I + Sbjct: 95 AG-------TLSIDKKQVRIVNVYCPNGSDLESPKFSYK------MEWFSALRTYIEDQL 141 Query: 200 ESLVPFVIAGDFN--------RKINYLGN---------NDDFWKTIDPNDSLIRFPKEKD 242 + ++ GDFN YLG + + + D+ F +E++ Sbjct: 142 NTNENLILTGDFNIAPKDEDIHP-KYLGPILISPQERAHFEALLDLGLVDTFRLFEQEQN 200 Query: 243 S-RCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDH 295 S + K ID+ + S + Y D + +R SDH Sbjct: 201 SFSWWDYRQFGFKRNAGLRIDHILAS---------SSLGKKCYKSWIDKKQRAHERPSDH 251 Query: 296 CPISIDYDF 304 P+ ++ Sbjct: 252 APVLAEFKL 260 >gi|239816655|ref|YP_002945565.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239803232|gb|ACS20299.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 346 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 + + + N+ L+ ++N +Y + L+AD++ +QE+ + Sbjct: 10 TLFVATCNLLNLA-NPHRLYYENQDAYDEREYERKIAWTGERFHALNADVLAVQEVWDES 68 Query: 79 AVAKVFPKN--TWCIFYSTERLINHSKRDSNNDI---------HTAIAVRKKNVRVLQ-- 125 A+ ++ + IA R + V Sbjct: 69 ALKAAIARSGLRYDFVSVPGAENTPPPASPPGTPARPGAQGTPRVGIATRLQVDEVRSFV 128 Query: 126 -------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS----------FC 168 P LG F R + + +G+++ VL +HLKS Sbjct: 129 DFPPGFGVEVPGLGPHTRFERPPLLATLRMK---HGQQVHVLTVHLKSKRPKFLQDAQGH 185 Query: 169 FLDSLENTY---SPSCSLLSQQAQWLKDW----ITQKKESLVPFVIAGDFN 212 L+ E+ S L + I + + P V+ GDFN Sbjct: 186 ALEDREDRKVGVMASLRSLVMRGVEAAALRCIVIDLLQGTNTPLVVMGDFN 236 >gi|33863562|ref|NP_895122.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] gi|33641011|emb|CAE21469.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] Length = 279 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 100/313 (31%), Gaps = 81/313 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D ++ + K+ D++ LQE + Sbjct: 1 MQIATWNVN--------------SIRTRLD--QVQAWLKDAQPDLLCLQETKVDDPLFPH 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 +VF + + + +A+ R+ V + L + Sbjct: 45 EVFEAQGYQV------------HFHGQKAYNGVAIVSRQPLEDVRRGFTGELPEDAEALQ 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQWLKDWIT 196 G ++ V + N I +++ ++ + L S + Y SC L ++ Sbjct: 93 LGEQKRVISALVNN---IRIVNAYVPNGSALKSEKYPYKLEWLSC---------LNRYLC 140 Query: 197 QKKESLVPFVIAGDFN-----RKINYL-----------GNNDDFWKTIDPNDSLIRFPKE 240 + + P + GDFN R I++ + K + D L + Sbjct: 141 AQAKRDEPLCLVGDFNIALEARDIHHPELLTGGIMASELEREALLKVLG--DRLHDVFRV 198 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + N + ID+ + + ++ ++ Sbjct: 199 FEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELL-----SQARSCVIHKH--LRGHEK 251 Query: 292 LSDHCPISIDYDF 304 SDH P+S+D ++ Sbjct: 252 PSDHAPVSVDLNW 264 >gi|319899105|ref|YP_004159198.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] gi|319403069|emb|CBI76624.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] Length = 260 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 102/307 (33%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R L ++ K DIV LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHE----TLCKWLKQNQPDIVCLQEIKSVD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++T + + +A+ L + P + ++ Sbjct: 42 FPRDT-------IESLGYHIETHGQKSFNGVAI-------LSKKVPDEIIRRLPGDNNDK 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---ITQK 198 +A + + N I V ++L + ++S + Y +W+K + Sbjct: 88 QARYIETVYSTNKGSIRVASLYLPNGNPINSEKYLYK---------MEWMKRFYTHAKSL 138 Query: 199 KESLVPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEK 241 P ++AGD+N ++ + ++ I IR + Sbjct: 139 LAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIFQCIVHLGFYDAIRCVTDT 198 Query: 242 DS----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S A +N ID+ ++ A LI Y++ +++ + SDH Sbjct: 199 PSFSFWDFQAGAWKKNNGIRIDHLLLSPEAADQLI------CAYSQTEMRGHQ-KPSDHI 251 Query: 297 PISIDYD 303 PI + + Sbjct: 252 PIWVQLN 258 >gi|291613446|ref|YP_003523603.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] gi|291583558|gb|ADE11216.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] Length = 247 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 107/287 (37%), Gaps = 50/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80 +++ ++NI +G S + V LR+ + LDADIVFLQE+ +A V Sbjct: 3 TLKIATYNI-----HKGFSQFNRRVV-----LHELRERLRELDADIVFLQEVQGEHAGHV 52 Query: 81 AKV--FPKNTWCIFYSTERLINHSK--RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + +P F + E +H+ ++ H AV + +LQ + A Sbjct: 53 QRHADYPAEPQHEFLADEFWAHHAYGMNAVYDEGHHGNAVLSRFP-ILQAFNKDVSAHRF 111 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 SR VE+ G+ + L H F + + Q + L +++ Sbjct: 112 ESRGLLHCEVEI----GGQLVHCLCAH-----FGLFAKGQRA--------QMRALVEYVL 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P VIAGDFN N L K I D + + K +R ++ + Sbjct: 155 NDIPKDAPLVIAGDFNDWRNQLSR--ALAKEIGVQD-VFGLQEGKPARSFPSRIPVFR-- 209 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + + ++ I + +RLSDH +S + Sbjct: 210 LDRIYVRGFSVQYCDVH-----------IGGKWRRLSDHAALSAQLE 245 >gi|187927854|ref|YP_001898341.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|187724744|gb|ACD25909.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] Length = 818 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 63/334 (18%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDA 66 VR+ S+N +N + + + + R T +++ + + L+A Sbjct: 449 APVRHAQADVRVASFNVLNYFNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRALNA 508 Query: 67 DIVFLQEMG-----SYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D+V L E+ +A+ ++ W + + D+ +A+ Sbjct: 509 DVVGLMEIENDGYGDLSAIRRLTSQLGADWRYV---DPGVPKLGGDAIT-----VAIVYN 560 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYS 178 + V P A D+ +R R+ + V++ HLKS C + ++ Sbjct: 561 SRTVEPVGAPATLAIDNRNRQPLARSFR-RIGDTQNFTVVVN-HLKSKGCSGATGKDADQ 618 Query: 179 ---PSC--SLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPN 231 SC + A + DW+ + ++ GD +N D Sbjct: 619 GDGQSCWNPTRVRAAGLIADWLATSPTGVADVGQLLIGD----LNSYAKEDPV-VLFAQK 673 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------------------- 272 K + ID+ + + + Sbjct: 674 GYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHINADEPIALEYAFG 733 Query: 273 --ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + D R SDH P+ +D Sbjct: 734 HKSAEQQQTFYAPD----AYRSSDHDPVLVDLAL 763 >gi|311898258|dbj|BAJ30666.1| hypothetical protein KSE_48880 [Kitasatospora setae KM-6054] Length = 302 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 64/233 (27%), Gaps = 65/233 (27%) Query: 23 KVRLVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN- 78 +R+ ++N+ L+ + + L +LDAD++ LQE+ Y Sbjct: 3 TLRIATYNLLHGQPLAPDGSPAPFPAEPG------APLADAVASLDADVLALQEVDRYQE 56 Query: 79 ---------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---- 125 AK W + + +AV Sbjct: 57 RSGRTDQAAVAAKAMGAADWRFAAALHGTPAPGAGWLADPARPGLAVYGPGDLADDSRPS 116 Query: 126 -------------------QSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWV 159 P R G R A+ ++ G + V Sbjct: 117 YGTALLTRLPVLHWRARRFAPAPFGLPLRVAGRRGLTPVPDEPRAALAAVLAGPGGEFTV 176 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + HL SF ++ Q ++ WI + P+++ GDFN Sbjct: 177 VAAHL-SFVPGWNVG------------QLAAIRRWI---ADLPQPYLVLGDFN 213 >gi|297518228|ref|ZP_06936614.1| putative metal-dependent hydrolase [Escherichia coli OP50] Length = 148 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 37/169 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + + ADIV LQE+ +V P E + S + + + + A Sbjct: 3 LRDAVRTVSADIVCLQEV---MGAHEVHP-------LHVENWPDTSHYEFLADTMWSDFA 52 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D +R V ++ + GK I V+ +H Sbjct: 53 YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVH 112 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L L + + Q L +W+ + + P ++AGDFN Sbjct: 113 L-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN 147 >gi|146340991|ref|YP_001206039.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] gi|146193797|emb|CAL77814.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] Length = 263 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 103/305 (33%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WN+N + +R L + K DIV LQE+ + +A + Sbjct: 1 MRIATWNVN------------SIRQR----IEHLVTWLKECSPDIVCLQEIKCTDDAFPR 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ +A+ K +S A+D +R Sbjct: 45 L-----------EIEALGYNVVTHGQKTFNGVALLSKLPFDETKSGLDGDAEDVHARF-- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E +V + + + ++L + ++ + Y + L+D+ ++ ++ Sbjct: 92 ---LEGVVSLKSGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYARERLKTE 142 Query: 203 VPFVIAGDFNRKINYLGNN-------DDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN + D ++ +R + + Sbjct: 143 EPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQSLLGLGLTDALRAVNDAPGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L++ D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255 Query: 300 IDYDF 304 D+D Sbjct: 256 ADFDL 260 >gi|88799498|ref|ZP_01115075.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] gi|88777808|gb|EAR09006.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] Length = 280 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 105/320 (32%), Gaps = 58/320 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 M+R +++V L+ C ++A +R+ S NI + + T D + Sbjct: 1 MVRLLSVSVVLSLLLCATALAGTPLRVASHNI-----HYILPNNPDDDWETRRD--AVIA 53 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKN------TWCIFYSTE-RLINHSKRDSNNDIHT 112 ++ ADI+ QEM S+ V N W + + + S I Sbjct: 54 VIDDMAADILAFQEMESF-----VGGVNHQNLQLDWVLEHHPDYNAGAFSDNADQFPITQ 108 Query: 113 AIAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHL 164 I R+ + Q + P + + + + N + ++V + H Sbjct: 109 PILYRRDRFSLQTQGFFFFSETPDVIYSRQWDGRYPYFVSWVELFDHTNDRNLFVFNFH- 167 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 D + +Q+ L ++ P ++ GDFN Sbjct: 168 -----NDFASRSNR-------RQSSELTAERIEQIAGETPVILLGDFNA---------PV 206 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 W P + N L+ ID+ ++ + + ++ ++ D Sbjct: 207 WFREVERFEPKLTPIKPGGSTNRILGLKLLPAIDHILISDD----FVADTDVQVW----D 258 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + G+ SDH PIS D F Sbjct: 259 RRYGGEYPSDHFPISADIRF 278 >gi|229828382|ref|ZP_04454451.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM 14600] gi|229792976|gb|EEP29090.1| hypothetical protein GCWU000342_00443 [Shuttleworthia satelles DSM 14600] Length = 390 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 99/322 (30%), Gaps = 66/322 (20%) Query: 20 VAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + ++SWN+ + G + S R + + K ++ D Sbjct: 88 AGDLLSVLSWNVGYGALGDNADFFMDGGKGVKTASQDRVKENLNEIVTEVKKINPDFALF 147 Query: 72 QEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKK 119 QE+ + + P+ Y+ + +++ + R + Sbjct: 148 QEVDVNSHRSYGIDESQILGQAMPRGQMTFAYNFKVAFIPYPLPPIGKVNSGLVTLSRYQ 207 Query: 120 NVRVLQQSYP-LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + S P + AV + NGK++ ++++HL++ D E + Sbjct: 208 IRDASRTSLPNPFSWPNRLGNLKRCLAVHRIPVSNGKELVLVNLHLEA---YDDGEGKLA 264 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINY-------LGNNDD------- 223 Q + L++ + +K+ +VIA GDFN+ + L Sbjct: 265 --------QTKVLRE-LLEKETEAGNYVIAGGDFNQIFSNVDSSAFPLHEGKWEPGIINS 315 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + + + + + K+ + ID F+ +N + Sbjct: 316 ADFGEGMQLLMDSGTASCRSLDHPLAGADQKDFQF-YIIDGFICSEN------------V 362 Query: 279 LYNEDDIKSRGKRLSDHCPISI 300 + SDH P+ + Sbjct: 363 TVESTQTQDLNFHASDHNPVVL 384 >gi|325279089|ref|YP_004251631.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] gi|324310898|gb|ADY31451.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] Length = 286 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 101/318 (31%), Gaps = 62/318 (19%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L L + CT + +RL ++NI + +G + W + + + +D Sbjct: 7 TLILSLLALGCTQQQPESLRLATFNIRYDNSGDGPNSWPHRK-------DSICAFIHRVD 59 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI+ +QE+ + + + + + + K + Q Sbjct: 60 PDIIDMQEVLHHQLEVLKTGLPEYTVVGVGREDGKTAGEYAPI-----FFKQAKYTLLDQ 114 Query: 126 QSY-----PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ P + A R A + ++ G+ + V++ H D + Sbjct: 115 NTFWLCEKPDSVGMVGWDAALTRIATWVKLQDKKTGQILMVVNTHF------DHIGTEAR 168 Query: 179 PSCSLLSQQAQWLKDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + +LL I +K + +V P ++ GDFN + D N+ I Sbjct: 169 RNSALL----------IIEKIKEIVGTSPAILTGDFN------VSEDWDAYKTITNNEFI 212 Query: 236 RFPKEKDSRCNANKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 K + + ID+ + FS++ +D Sbjct: 213 LKDAHKVAGKRTGVDFTYHNFGKIPAEKCEKIDFIFVTPQIRVISSYIPFSQL----NDT 268 Query: 286 KSRGKRLSDHCPISIDYD 303 LSDH P ++ + Sbjct: 269 LF----LSDHNPEIVELE 282 >gi|21224654|ref|NP_630433.1| exonuclease [Streptomyces coelicolor A3(2)] gi|3367747|emb|CAA20072.1| putative exonuclease [Streptomyces coelicolor A3(2)] Length = 259 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE A Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +AV + L G R Sbjct: 41 ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + L+ + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALRAAVEGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPID 258 PF + GD+N +DD + + P E+ + + + + D Sbjct: 143 PFAVLGDYN----VAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD 198 Query: 259 YFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + ++ + + + S R SDH P+ +D D Sbjct: 199 HPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDREERKGKGASDHAPVVVDLD 258 Query: 304 F 304 Sbjct: 259 L 259 >gi|149377356|ref|ZP_01895101.1| extracellular nuclease, putative [Marinobacter algicola DG893] gi|149358368|gb|EDM46845.1| extracellular nuclease, putative [Marinobacter algicola DG893] Length = 588 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 96/324 (29%), Gaps = 57/324 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQE 73 + +R+V+ N+ R T Q L D DI+ + E Sbjct: 282 SATLRVVTLNLGNF-FNGDGRGGGFPAARGAQSATQFEQQKARLVASLTIPDPDILAVTE 340 Query: 74 MGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAI-AVRKKNVRVLQQSY 128 M + + I L H R + + +T A+R + + Sbjct: 341 ME----------NDGYEGDSAIAELARALGPH-WRYVDTNNNTGSDAIRTDLLYRSDRVV 389 Query: 129 PLLGAKDSFSRAGNRRAVELLVE-----INGKKIWVLDIHLKS-FCFLDSLENTYSPS-- 180 A + +RR + + + + + ++ HLKS C N Sbjct: 390 AEGSASRLTTTPFDRRGRPPVAQIFRPINSDRALRIVVPHLKSKACRGAKGPNRDQDDGQ 449 Query: 181 -CSLLSQQ--AQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--- 232 C ++ + + W L +I GD N + + ++ Sbjct: 450 GCYSHRREQATRAIIRWTHALPHPNGLAGTMITGDMN-----AYAREAPLQLLEAAGFIN 504 Query: 233 SLIRFPKEKDSRCNANKNLRN--KIPIDYFVMDQN-------AYKFLI-QESFSEILYNE 282 ++ F D+ C + +DY ++ A+ + I + + Y Sbjct: 505 TVHHFHGCTDTSCKHTSYRYHGRSGTLDYSLVSNGLLPQIVGAHTWSINSDEPRALGYKG 564 Query: 283 DDIKSRGK--RLSDHCPISIDYDF 304 G+ R SDH P+ D Sbjct: 565 PVTLPTGQPWRSSDHNPVITDLSL 588 >gi|262279680|ref|ZP_06057465.1| nuclease [Acinetobacter calcoaceticus RUH2202] gi|262260031|gb|EEY78764.1| nuclease [Acinetobacter calcoaceticus RUH2202] Length = 812 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 102/332 (30%), Gaps = 62/332 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNL---DADIVFLQEM-- 74 A +R+ S+N+ + T +++ R+ L DAD+ L E+ Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIAN 519 Query: 75 -----GSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 S A + K + W + + R + I AI K V+ L + Sbjct: 520 NGYGPDSAIAHLTKALGSD-WKYV-----VPENLDRLGGDAIAVAIIYNSKRVKPLNKPV 573 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C- 181 D + A K V+ HLKS C +T + C Sbjct: 574 ----VLDLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCW 629 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTID 229 + + W+ + + ++ GD N +++ N I Sbjct: 630 NPTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMNSYAKEEPILSFEKANYKVLLNDAKIG 689 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYN 281 + S N N N +D+ + D Y ++ + + + YN Sbjct: 690 QGTQAYSYVYGVASDANGNGGAGN---LDHAIADAALYPKVVRTFAWHINADEPTVLDYN 746 Query: 282 EDDIKSRGKRL---------SDHCPISIDYDF 304 E+ K L SDH P+ +D D Sbjct: 747 EEYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|323497461|ref|ZP_08102479.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326] gi|323317544|gb|EGA70537.1| hypothetical protein VISI1226_00690 [Vibrio sinaloensis DSM 21326] Length = 316 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 103/271 (38%), Gaps = 30/271 (11%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +LDADI+ LQE+ S A K+F + + F + + + A+A R Sbjct: 47 ITSLDADIIGLQEVFSIEATRKLFDQLGYRYFVTVDE-PHIESDYIYTKPIVALASRFPI 105 Query: 121 VRVLQQSYP--LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTY 177 + P L+ + +R+ + +++ ++ V HLKS + N Sbjct: 106 THFEAVTPPCSLVQDYNVECPRFSRQPIYAVIDAADIGQVAVYVCHLKS--QRATESNNP 163 Query: 178 SPSCSLL-----SQQAQW----LKDWITQK-KESLVPFVIAGDFNRKINYLGNN------ 221 +LL SQQ W L+ ++ QK ++ +P + GD N+ I Sbjct: 164 ESDNALLGVWLSSQQRGWEAVMLRHFMQQKYRDKPMPTALMGDMNQTILSDTTGMLVKDL 223 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK--IPIDYFVMD---QNAYKFLIQESFS 276 + DS + F + S A + +DY ++ Q + + + Sbjct: 224 KQLDNELKLEDSWLIFQESHPSAERAATHYHFARGNVLDYVLLSQEFQTHSSYSMADVSH 283 Query: 277 EILYNEDDIK---SRGKRLSDHCPISIDYDF 304 + ++ I S+ K+ SDH +++ F Sbjct: 284 YRVLDQHLINPNYSQDKQASDHAFVAVTVRF 314 >gi|87201202|ref|YP_498459.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] gi|87136883|gb|ABD27625.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] Length = 263 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 87/311 (27%), Gaps = 79/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN R +D + ++ D++ LQE+ V Sbjct: 2 ISVATWNIN--------------SVRLRAD--QVERFLLQEAPDVLCLQEI---KCAESV 42 Query: 84 FPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + Y+ + V + + D Sbjct: 43 FPHEVFEKLGYTHRAIHGQKGYH-------------GVATVSRIPFRDFSRHDWQDNGEA 89 Query: 143 RR-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VELL NG + + ++++ + + Q+ +L+ ++ Sbjct: 90 RHIGVELLGPGNG--LILENVYIPAG-----GDVADREVNPKFGQKLDFLERMTRWAEKI 142 Query: 202 LVPFVIAGDFNRKINYL----GNNDDFWKTIDPNDSLIRFPKEKDSRCNA---------- 247 P +I GDFN I L ++ K + L ++ + + Sbjct: 143 ERPTLIVGDFN--IAPLECDVYDHKALLKVVSH-TPLEVETLQRFADAHGWVDLGRKHIP 199 Query: 248 -----NKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + +D+ A F E D + S Sbjct: 200 APERNYSWWSYRSYWRAKDQGRRLDHMWASPEAAAQTRGHRFVEETRKWD-------QPS 252 Query: 294 DHCPISIDYDF 304 DH P+ + D Sbjct: 253 DHIPLITELDL 263 >gi|295395470|ref|ZP_06805665.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971641|gb|EFG47521.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 301 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 72/231 (31%), Gaps = 57/231 (24%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE+ S + K+ ++ + + L Sbjct: 116 PDIVTLQEIESLSG--KII-----------REQMDKNFKHHKVSDTVG----------LW 152 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 +P+ ++ RA V+ + + V +H+ S E+ + + ++ Sbjct: 153 SKWPISDIEEIDLGLSWPRAFAATVKTDHGDVRVYSVHMPS--VRPGSESLRNAALQTVA 210 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-DSLIRFPKEKDSR 244 Q+ ++ ++AGDFN + D ++ ++ + R Sbjct: 211 QKVS---------EDPAQRVIVAGDFN-----STSTDRYFADLNDSLTDTRRATGGGFGF 256 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K + +D+ ++ + D + RG SDH Sbjct: 257 TWPAKFPVAR--VDHIMV-------------RGMEPVSDTVLPRGT--SDH 290 >gi|242023120|ref|XP_002431984.1| protein angel, putative [Pediculus humanus corporis] gi|212517335|gb|EEB19246.1| protein angel, putative [Pediculus humanus corporis] Length = 354 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 105/302 (34%), Gaps = 52/302 (17%) Query: 24 VRLVSWNI--NTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75 +RL+ WNI TL S V S+ + + +L++ +N D D++ L+E+ Sbjct: 70 LRLLQWNILSQTLGVSNDNFVKTPPESLDWSLKRFYVLQEIIQN-DPDVICLEEVDHFKF 128 Query: 76 ------SYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 S K FP ++ C++ + + + I + + V Sbjct: 129 LESALKSIGYSGKFFPKPDSPCVYVEGNNGSDGAAMFYKTSKYEVIKWETRILEVWHVQS 188 Query: 129 PLLGAKDSFS--RAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLL 184 +G +G V + HLK+ L +L + Sbjct: 189 NQVGLSSILKDKESGIEFCVAVT-------------HLKAKAGALLATLRD--------- 226 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 Q + L W+ +K P +I GDFN ++ ++T+ N ++ + R Sbjct: 227 -HQGRDLLTWL-EKISGGRPIIIGGDFN-----AEPSEPVYRTMTDNRLDLKSAYSVNGR 279 Query: 245 CNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + IDY ++ + + + + I S SDH + +D+ Sbjct: 280 EPPYTTWKGEICHTIDYVFHSKHFIPLRLLDFPTGKTIGPERIPSLSY-PSDHFSLVVDF 338 Query: 303 DF 304 + Sbjct: 339 EL 340 >gi|221212763|ref|ZP_03585739.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|221166976|gb|EED99446.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 285 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 39/212 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------- 73 +R++ WNI + +GV ++RT + L + D++ +QE Sbjct: 1 MRVIDWNIQWGRDADGVV----DLRRTIAAARQLADF------DVLCVQEITRGFDALPG 50 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + + +A + P + + + + ++ + AIA R RVL+Q P Sbjct: 51 HPGVDQFAELAALLPG--YTVVEAIGADLPPAQPGAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + + R A+++ + + V+ HL + +D++ + +C+ Sbjct: 109 WPA--DADAPSMPRVALDVELLTASGPLRVVTTHLEFYSERQRLAQVDAIRARHREACAH 166 Query: 184 LSQQAQWLKD---WITQKKESLVPFVIAGDFN 212 + A D ++ ++ GDFN Sbjct: 167 ADRPAPAENDTGPFVAT--AQSRDAILCGDFN 196 >gi|299134949|ref|ZP_07028140.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] gi|298589926|gb|EFI50130.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] Length = 260 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 99/304 (32%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + K + D+V LQE+ + + Sbjct: 1 MRIATWNVN------------SVRQR----LDHLLTWLKEREPDLVCLQEI---KCLDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + +D +R Sbjct: 42 FPR-------EPIEALGYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPEDLHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + ++L + +++ + Y + L ++ ++ +S Sbjct: 92 --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYK------LRWMDRLIEYARERLKSEE 143 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTID-PNDSLIRFPKEKDSR-- 244 PFV+AGDFN + D F ++ R + + Sbjct: 144 PFVLAGDFNVIPTPADVYNPQAWLEDALFLPQTRDKFQTLLNLGLTDAFRATSDAPRQYT 203 Query: 245 ---CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 A +N ID+ +M A L D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLLMSPPASDRLKAAGI-------DKHVRGWEKASDHVPVWA 256 Query: 301 DYDF 304 D DF Sbjct: 257 DLDF 260 >gi|37993834|gb|AAR06998.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 93/235 (39%), Gaps = 30/235 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVP 250 >gi|37993837|gb|AAR07000.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 30/235 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 + Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 196 TNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVP 250 >gi|256784140|ref|ZP_05522571.1| exonuclease [Streptomyces lividans TK24] gi|289768021|ref|ZP_06527399.1| exodeoxyribonuclease III [Streptomyces lividans TK24] gi|289698220|gb|EFD65649.1| exodeoxyribonuclease III [Streptomyces lividans TK24] Length = 259 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE A Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + +AV + L G R Sbjct: 41 ------QFPFDALREAGYEAAVHATGRWNGVAVLSRVGLEDVVKG-LPGDPGYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + L+ + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEVLRAAVEGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPID 258 PF + GD+N +DD + + P E+ + + + + D Sbjct: 143 PFAVLGDYN----VAPTDDDVYDRAAFEGATHVTPAERAALASLRGAGLSDVVPRPLKYD 198 Query: 259 YFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + ++ + + + S R SDH P+ +D D Sbjct: 199 HPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDREERKGKGASDHAPVVVDLD 258 Query: 304 F 304 Sbjct: 259 L 259 >gi|159901516|ref|YP_001547762.1| hypothetical protein Haur_5004 [Herpetosiphon aurantiacus ATCC 23779] gi|159894555|gb|ABX07634.1| hypothetical protein Haur_5004 [Herpetosiphon aurantiacus ATCC 23779] Length = 335 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 45/217 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNA 79 + +++WNI L V L N DY + +ADIV +QE+ S + Sbjct: 3 TITVMAWNIENL---GDVKLDPNRAGDALVDY--IANVVSYNEADIVAIQEVRSNMGADL 57 Query: 80 VAKV-------FPKNTWCIFYSTERLINHSKRDSNN------DIHTAIAVR-KKNVRVLQ 125 V ++ N W S + ++ D+++ +A+ Q Sbjct: 58 VQRLAAELDGYTSPNVWKGQESPQFCNQRLEQYVFLWDTRKVDLYS-VAINGTPGSFQYQ 116 Query: 126 QSYPLLGAKDS----------FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + P G + S A V+ +I V H Sbjct: 117 YANPNFGQPNQPQWLGFPKQIASNRPPYLAYFQTVQAPNVQIPVAVFH----APGPGYWI 172 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +C L+Q +T+ VI GDFN Sbjct: 173 GVRDACKNLAQ--------VTEFATQGHSLVIMGDFN 201 >gi|62290271|ref|YP_222064.1| hypothetical protein BruAb1_1372 [Brucella abortus bv. 1 str. 9-941] gi|82700193|ref|YP_414767.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis biovar Abortus 2308] gi|189024505|ref|YP_001935273.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237815777|ref|ZP_04594774.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689573|ref|ZP_05152827.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 6 str. 870] gi|254697714|ref|ZP_05159542.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730604|ref|ZP_05189182.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 4 str. 292] gi|256045007|ref|ZP_05447910.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256257822|ref|ZP_05463358.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 9 str. C68] gi|256369791|ref|YP_003107302.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260546815|ref|ZP_05822554.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260565390|ref|ZP_05835874.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260755101|ref|ZP_05867449.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260758320|ref|ZP_05870668.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260762146|ref|ZP_05874489.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260884113|ref|ZP_05895727.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|265991436|ref|ZP_06103993.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297248660|ref|ZP_06932378.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] gi|62196403|gb|AAX74703.1| hypothetical conserved protein [Brucella abortus bv. 1 str. 9-941] gi|82616294|emb|CAJ11351.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|189020077|gb|ACD72799.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237789075|gb|EEP63286.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|255999954|gb|ACU48353.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260095865|gb|EEW79742.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260151458|gb|EEW86552.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260668638|gb|EEX55578.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260672578|gb|EEX59399.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260675209|gb|EEX62030.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260873641|gb|EEX80710.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|263002220|gb|EEZ14795.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297175829|gb|EFH35176.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] Length = 369 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 116/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|333030574|ref|ZP_08458635.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] gi|332741171|gb|EGJ71653.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM 18011] Length = 288 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 107/331 (32%), Gaps = 72/331 (21%) Query: 2 IRKYVLALVF----FLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 ++KY+L L+ L C +S + ++++++NI + +G W+ R + Sbjct: 1 MKKYLLLLMAVSMGLLSACNSSQPKLDLKVMTFNIRLDTSDDGEYSWE---HRKEQAGAM 57 Query: 57 LRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 AK D D++ QE+ A + + Sbjct: 58 ----AKAQDCDLIGTQEVLNHQLEDLKAA-----LPEYEAVGVGRADGKTEGE------Y 102 Query: 112 TAIAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIH 163 +++ +K L P + + A R A +L++ ++++ ++ H Sbjct: 103 SSLLYKKDRFDALDSGTFWLSETPEVAGSKGWDGACERVASWVLLKDKETLREVFFINTH 162 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L +LL ++A L P V+ GDFN +D Sbjct: 163 L-----DHVGVEARREGVNLLLERAYKL--------AKDAPIVLTGDFN----AEPESDV 205 Query: 224 FWKTIDPNDSLIRF-PKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQE 273 + I+P E + + IDY + Sbjct: 206 IFNVINPEKERHLLSTHEVAQEVKGTNWTFHDYDRLDINKREYIDYIFVSA--------- 256 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y +K G+ +SDHCP+ + +F Sbjct: 257 PVTVKSYEVLPMKYEGQFVSDHCPVVANIEF 287 >gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] Length = 1080 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 98/299 (32%), Gaps = 49/299 (16%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P +++ + ++N+ E L ++ +R + +LLR + DADI+ LQ Sbjct: 182 ASPGALPPPEELTVATFNV-LFDLHEAELL--DTPRRIPAALSLLR----SADADIIALQ 234 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + W + A ++L +P Sbjct: 235 EVTEPFL--RALLETPWI------------REHYFLSEGPGAATVTPYGQLLLSRFPFAS 280 Query: 133 AKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 FSR A E+ ++ G +WV +HL S S + + Q + + Sbjct: 281 LSQCVFSRDKRVIAGEIRLK--GGTLWVATLHLTSHRAHASSSSRAA--------QLRAI 330 Query: 192 KDWITQKKESLVP---FVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 W + V+AGDFN G D W + P + F E Sbjct: 331 VGWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTD-VWPLLRPGEPGYTFDPE 389 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES---FSEILYNEDDIKSRGKRL-SDH 295 ++ + +D ++ ++ L + F E + + G SDH Sbjct: 390 RNGLATVMTVSGRRQRLDRVLV-RSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDH 447 >gi|121595605|ref|YP_987501.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|120607685|gb|ABM43425.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] Length = 291 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 94/309 (30%), Gaps = 49/309 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 ++LV+WN +G D + QYA L D D++ LQE+ Sbjct: 1 MQLVTWNTQWCRGLDG-----------RVDPARIVQYALALGDVDVLCLQEIAVNYPGLA 49 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 V P F + + R ++ IA R +++ P Sbjct: 50 GAPGDQVAQVQSALPAGWQVFFGAAVDEWTAAGRQRFGNL---IATRLPVLQLQHHPLPY 106 Query: 131 LGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYS------PSCSL 183 D+ R+ R L V+ + V+ HL+ + + + +C+ Sbjct: 107 P--PDAGVRSMPRLCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQ 164 Query: 184 LSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +Q Q L D + ++ P + GDFN + + + + + Sbjct: 165 AAQPPQGLADGSPFQPKAHTPHAVLCGDFNLQ-AHEPEYAVLAAALADEEGATAGQAGQP 223 Query: 243 S--RCNANKNLRNKIPIDYFVMDQNAYKF-------LIQESFSEILYNEDDIKSRGKRLS 293 + P + V DQ + +S + S Sbjct: 224 PLWDAWRLLHPGAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVDGVTQA--S 281 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 282 DHQPVLLEL 290 >gi|167622812|ref|YP_001673106.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] gi|167352834|gb|ABZ75447.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] Length = 377 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 85/243 (34%), Gaps = 53/243 (21%) Query: 18 ASVAQKVRLVSWNINTLSEQEGV---------SLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++++ +++L S+N+ E + +R +D+ L ++ D+ Sbjct: 7 SNMSNRLKLASFNLFNYIEPPLAYYDFENIYSKEQWHKKQRWLADF--LARH----QPDV 60 Query: 69 VFLQEMGSYNAVAKVFPKNTWC---IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + QE+ S +A+A+ + + + S + ++ RD + + A + + Sbjct: 61 IGFQEVFSADALAQQMSEAGYKHFAVVDSPTIIDDYICRDPVVGLASKFAFEEVVSIEVD 120 Query: 126 QSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-------CFLDSLEN 175 Y L ++SR R V+L + +H KS + Sbjct: 121 SQYAAGLGLNQNFAYSRKPLRATVQL---PQIGLCDIYVVHFKSKRPHLDELPQPKFTQT 177 Query: 176 TYSPSCSLLSQQAQW-----LKDW-----------------ITQKKESLVPFVIAGDFNR 213 S + L + L W + ++ E+ P V+ GDFN Sbjct: 178 ANRSSAAPLVNFGELLGRNSLGQWASSIQRGSEAALLFHAMLQRRIETNQPMVLMGDFND 237 Query: 214 KIN 216 +++ Sbjct: 238 ELS 240 >gi|163788854|ref|ZP_02183299.1| hypothetical protein FBALC1_11472 [Flavobacteriales bacterium ALC-1] gi|159876091|gb|EDP70150.1| hypothetical protein FBALC1_11472 [Flavobacteriales bacterium ALC-1] Length = 283 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 98/291 (33%), Gaps = 48/291 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 + + SWNI + T ++Y + Q+ + DI+ QEM Sbjct: 6 LNVGSWNIE---------KFGLVDDNTENEY-AIAQHIELSGVDILAFQEMYITNKSRFT 55 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQSYP 129 + + K NTW R + + + +T +K +++ ++ Sbjct: 56 NKHLDAALDLVKEHTGNTWKYEIFPNRSASDTSQLCGVTWNTNRVTKKLDTLKIPVKTKV 115 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSLLSQQA 188 K + AV+ E + ++ IH+KS + E L + Sbjct: 116 EFEGKTLWLWDRIPHAVKFETEQGKTDLIIISIHMKSNVGKRYIVERKRYEEAKTLIENI 175 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSR 244 + I + K+ + VI GD N K + F ++ ++ +D + F + + + Sbjct: 176 PLV---IDELKDKDI--VILGDTNCKSRREPAINAFITGGFEDLNADD-IPTFVRGEKA- 228 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P D + + + + S + + + + LSDH Sbjct: 229 -----------PFDRIFVPGDEDRKPFKYS-RQYIMRSASPLAHDEYLSDH 267 >gi|126734997|ref|ZP_01750743.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. CCS2] gi|126715552|gb|EBA12417.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. CCS2] Length = 399 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 75/258 (29%), Gaps = 70/258 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYNAV 80 + S+N+ L E E T +Y L ++AD+V QE+ S A+ Sbjct: 5 TIASFNVKNLIEAEEEYYRFEEY--TPEEYAWKRAWLADQLLTMNADVVCFQEIFSEAAL 62 Query: 81 AKVFPKNT----------------------------WCIFYSTERLINHSKRDSNNDIHT 112 V + + + + D Sbjct: 63 RDVVIETDGLGQAANEAVIPHRSKGYARKAIFRKLAYEPYTEAGLAFAPNSFDGGPGQRR 122 Query: 113 -AIAVR------------KKNVRVLQQSYPLLGAKD---SFSRAGNRRAVELLVEINGKK 156 IAV + + L + L D + +R +++ + + Sbjct: 123 PGIAVLSRFGFVGEPEIIQDLPKPLTVPFSDLDGSDGGQYQIKRLSRPILKVRIPVGDAV 182 Query: 157 IWVLDIHLKS---------FCFLDSLENTYSPSCSL---------LSQQAQW--LKDWIT 196 I V + HLKS N + + L + A+ L+ + Sbjct: 183 ITVFNCHLKSKLGELPRPEGAAFPPAANLVNYDPATRAMGSLRSALRRMAEAWVLRKAVL 242 Query: 197 QKKESLVPFVIAGDFNRK 214 ++ E+ P ++ GDFN Sbjct: 243 EELEAGNPVMVLGDFNDN 260 >gi|91977274|ref|YP_569933.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] gi|91683730|gb|ABE40032.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] Length = 263 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 106/305 (34%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + K + D+V LQE+ V + Sbjct: 1 MRIATWNVN------------SVRQR----IDHLVSWLKACEPDVVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K L+++ P L ++ A R Sbjct: 42 FPR-------EPIEALGYNIVTHGQKTFNGVALLSKYP--LEEATPRLAGDETDVHA--R 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + +++ + Y S L + ++ ++ Sbjct: 91 F-LEGVVSLKRGVVRVACLYLPNGNPVETEKYPYKLS------WMSRLLQYSKERLKTEE 143 Query: 204 PFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN +D ++ +R + + Sbjct: 144 PLILAGDFNVIPQASDVYNPA-GWVDDALFRPQTRESFQALLGLGLTDALRATTDAPGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L+ D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNWGIRIDHLLLSPQATDRLVGVGI-------DSHVRSWEKPSDHVPVW 255 Query: 300 IDYDF 304 D+DF Sbjct: 256 ADFDF 260 >gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1024 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 98/299 (32%), Gaps = 49/299 (16%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P +++ + ++N+ E L ++ +R + +LLR + DADI+ LQ Sbjct: 126 ASPGALPPPEELTVATFNV-LFDLHEAELL--DTPRRIPAALSLLR----SADADIIALQ 178 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 E+ + + W + A ++L +P Sbjct: 179 EVTEPFL--RALLETPWI------------REHYFLSEGPGAATVTPYGQLLLSRFPFAS 224 Query: 133 AKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 FSR A E+ ++ G +WV +HL S S + + Q + + Sbjct: 225 LSQCVFSRDKRVIAGEIRLK--GGTLWVATLHLTSHRAHASSSSRAA--------QLRAI 274 Query: 192 KDWITQKKESLVP---FVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 W + V+AGDFN G D W + P + F E Sbjct: 275 VGWANALGTQGLHSPDVVLAGDFNFSEDAPEGHAFAQHGFTD-VWPLLRPGEPGYTFDPE 333 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES---FSEILYNEDDIKSRGKRL-SDH 295 ++ + +D ++ ++ L + F E + + G SDH Sbjct: 334 RNGLATVMTVSGRRQRLDRVLV-RSPSGRLTPRAVTLFGETPLPAPEAPAGGPLFTSDH 391 >gi|225852859|ref|YP_002733092.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|256263656|ref|ZP_05466188.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|225641224|gb|ACO01138.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|263093710|gb|EEZ17715.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|326409399|gb|ADZ66464.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M28] Length = 369 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 116/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|241745915|ref|XP_002405543.1| ap endonuclease, putative [Ixodes scapularis] gi|215505857|gb|EEC15351.1| ap endonuclease, putative [Ixodes scapularis] Length = 507 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 91/321 (28%), Gaps = 79/321 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWNIN L + ++ LDADI+ QE A V Sbjct: 1 MKLVSWNINGLRSFKAG----------------VKGLLAELDADIICFQET---KATRDV 41 Query: 84 FPKN-----TWCIFYS-TERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + F+S +S + D A + + L S + Sbjct: 42 LEETSAIVEGYSAFFSFPRYQSGYSGVATFCKDAFRPFAAEEG-LTELWTSSGCPDSVGF 100 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSF------------CFLDSLENTYSPSCSLL 184 + + + + + + H++ C E + Sbjct: 101 YGDTSDFDSKNISSVDGEGRTVLTLHHVRCGDKLKRIAVINVYCPRADPEKPERG--QIK 158 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNND-----------DFWKTIDP 230 + LK + + +I GD N RKI++ +D + ++ Sbjct: 159 LDFYELLKRRAMTLLRNGLEVIILGDLNTSHRKIDHCDPSDDEDFDSNPGRIWLSQFLEN 218 Query: 231 NDSLIRF---------PKEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + F EK C + IDY + FL Sbjct: 219 STTNTCFHDTYRRLHPTTEKAFTCWNTRLGARQTNYGTRIDYVLCSPALVPFL------- 271 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 DI SDHCP+ Sbjct: 272 ---QTADILPHVLG-SDHCPV 288 >gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 788 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTIDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 QGRVSDHDPVLAQIDL 784 >gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] Length = 788 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLAPVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDSVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|254229170|ref|ZP_04922589.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262395520|ref|YP_003287373.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25] gi|151938255|gb|EDN57094.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262339114|gb|ACY52908.1| hypothetical protein VEA_000220 [Vibrio sp. Ex25] Length = 317 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 91/302 (30%), Gaps = 30/302 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 ++ V+ N+ ++ L + + L+AD++ LQE+ S Sbjct: 6 RITFVTANLFNFVAPPDAYYDFENIYSLEQWQDKLAWTQRQIEKLEADVIGLQEVFSIEK 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----AKD 135 F + F + + + + AIA R +V + L Sbjct: 66 TQAFFSTIGYPYFATVDT-PHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEPFGIS 124 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--SLLSQQ-----A 188 + ++ I V HLKS DS + S + LS Q A Sbjct: 125 VAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQRGWEA 184 Query: 189 QWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEK 241 L+D + ++ ++ +P V+ GD N+ I N + + Sbjct: 185 AMLRDAMQKRYRKEPMPTVLMGDMNQPITPTSVNSALVANTGDSVTELQLKDGWSLQSDA 244 Query: 242 DSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLS 293 + +DY ++ Q + Y + I R K S Sbjct: 245 LKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRDKNAS 304 Query: 294 DH 295 DH Sbjct: 305 DH 306 >gi|323135771|ref|ZP_08070854.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] gi|322398862|gb|EFY01381.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] Length = 269 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 93/308 (30%), Gaps = 70/308 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 +Q++R+ +WN+N + +R + L + K DI+ LQE+ + Sbjct: 6 SQELRVATWNVN------------SVRQR----LSPLLAFLKETAPDILCLQELKCEDHA 49 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ N +A+ + +G Sbjct: 50 FPRSEIEDAGYNVVVHGQKTFN------------GVAI----LSNRPIEETTIGLPGFDG 93 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A +R ++ + G + V I+ + D+ + TY + + L Sbjct: 94 EAQSRYVEAVISDGAGGVLRVASIYAPNGNPPDTPKYTYKLAF------MEALTRHAADL 147 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD--------FWKTIDPN---------DSLIRFPKEK 241 ++AGD+N +D F +R ++ Sbjct: 148 LRLEEVTILAGDYNVIPEARDVHDPAAWIGDALFMPQSRAALQRVINLGYTDALRAVTDE 207 Query: 242 DS-----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A +N+ ID+ ++ A L + + G++ SDH Sbjct: 208 PGLYTFWDYQAGAWQKNRGLRIDHLLLSPRAADRLAGVEIHKSM-------RAGEKPSDH 260 Query: 296 CPISIDYD 303 IS + Sbjct: 261 VAISAELT 268 >gi|299145368|ref|ZP_07038436.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515859|gb|EFI39740.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 366 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 92/321 (28%), Gaps = 94/321 (29%) Query: 13 LVPCTASVAQKVRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +V A + + ++N++ + E G S + + Y +NL ADI+ Sbjct: 99 MVKMNAYTPGILTVATYNVDAFNHEHTGYSCKE------------IASYMRNLQADILCF 146 Query: 72 QE--------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 QE + S AV + + I S E + Sbjct: 147 QEFGINDEFGVDSIAAV--LSDWPYYYIPISPEG-------------------KNLLQLA 185 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLD 171 + YP+ ++ +E N + I + + HL++ D Sbjct: 186 VFSRYPIKEENLIVYPDSKNCSLWCDIETNARTIRLFNNHLQTTEVSQNKRKLEKGLRTD 245 Query: 172 SLENTYSPSC----------SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINY 217 + + + QA LK I S P +I GDFN + + Sbjct: 246 DSQRVERAALGLIDGLHENFRKRAVQANTLKQLI---AASPYPTIICGDFNSLPSSYVYH 302 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + + K ++ + IDY L + Sbjct: 303 TVKGDKLQDGFQTSGHGYMYT---------FKFFKHLLRIDYI---------LHSPEVNS 344 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 Y D+ SDH P+ Sbjct: 345 TDYFSPDLTY-----SDHNPV 360 >gi|261219142|ref|ZP_05933423.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261322204|ref|ZP_05961401.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] gi|260924231|gb|EEX90799.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261294894|gb|EEX98390.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] Length = 310 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 64/306 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 6 IAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRD 63 Query: 117 --RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKKIW 158 R + + + P L R R + + + I G+ + Sbjct: 64 TTRDGQPIEVNEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLS 123 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-- 212 + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 124 LFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDY 183 Query: 213 RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------RN 253 R+ +G ++ + + + + + R+ Sbjct: 184 RERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERH 243 Query: 254 KIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHCPI 298 +DY + + + I E ++ + SDHCP+ Sbjct: 244 LCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPV 303 Query: 299 SIDYDF 304 S+ + Sbjct: 304 SVTLNM 309 >gi|126736303|ref|ZP_01752045.1| bifunctional GMP synthase/glutamine amidotransferase protein [Roseobacter sp. CCS2] gi|126714124|gb|EBA10993.1| bifunctional GMP synthase/glutamine amidotransferase protein [Roseobacter sp. CCS2] Length = 266 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 98/287 (34%), Gaps = 52/287 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL---DADIVFLQEMGSYNAVA 81 R+ WN L+ G+ D+ +++ A+ L DA++V L E+ + + Sbjct: 10 RVAVWN---LAGFGGI------------DFDRMKRQAEGLALLDAELVTLVEVNPVSYID 54 Query: 82 KVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + T+ + Y T L + V+ + G++ ++ Sbjct: 55 ALAAEIGTYGLHYDTTILPQPGGLHIGFLHKKGVEVKNVTLV--------PGSEGAYLNG 106 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RRAV + V++ VL +HLKS + C + +L + Sbjct: 107 --RRAVSVDVKMGKFSAHVLGVHLKSG-RDKPEQKLRDTQCIAI---GNYLTNLRNTPGF 160 Query: 201 SLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ GDFN ++LG DD + D RF D Sbjct: 161 KRKTLLLMGDFNMIPGQDVSNFHHLG-GDDLMDFVSSWDLQDRFSHILDKG--------R 211 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYN-EDDIKSRGKR--LSDHCP 297 +D F + + ++ S + D+ R +SDH P Sbjct: 212 ANLLDGFAVSRTFATDYVRGSLRLFPMHWTMDMGRERFRDEVSDHLP 258 >gi|17986911|ref|NP_539545.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] gi|17982554|gb|AAL51809.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] Length = 337 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 64/306 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 33 IAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRD 90 Query: 117 --RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKKIW 158 R + + + P L R R + + + I G+ + Sbjct: 91 TTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLS 150 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-- 212 + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 151 LFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDY 210 Query: 213 RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------RN 253 R+ +G ++ + + + + + R+ Sbjct: 211 RERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERH 270 Query: 254 KIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHCPI 298 +DY + + + I E ++ + SDHCP+ Sbjct: 271 LCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPV 330 Query: 299 SIDYDF 304 S+ + Sbjct: 331 SVTLNM 336 >gi|291333503|gb|ADD93201.1| exodeoxyribonuclease III [uncultured archaeon MedDCM-OCT-S08-C282] Length = 259 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 100/312 (32%), Gaps = 86/312 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R VSWN+N L ++ K + Y +L AD+V LQE + + Sbjct: 1 MRFVSWNVNGLR----AAIRKG-----------IDGYFDDLKADVVMLQET---RTLEEQ 42 Query: 84 FPKN-----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 PK+ W + +S + + A+ + K Sbjct: 43 LPKDWAWPTGWDVTLHPAEKKGYSGVATASTQAHAVVAKGKGGVFDSNDSE--------- 93 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---I 195 L+ E++G C L + + ++ W+++W I Sbjct: 94 ------GRVLVCEVDGVV-----------CVNTYLPSGSNKDERQTFKEG-WMEEWRQFI 135 Query: 196 TQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + P V+ GD N R +L + ++ + + L F + Sbjct: 136 RPYLDDTRPVVVCGDLNIAHTEDDIWNPKGNARNSGFLPHERAWFSDLLADGWLDAFRHK 195 Query: 241 KDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 N+ IDYF+++ A + ++ + ++ G Sbjct: 196 VGDGAKVYSWWSNRGQARAKDRGWRIDYFLLNPAAAEAMVDCTI---------VRQGGID 246 Query: 292 LSDHCPISIDYD 303 +SDH P+ +D D Sbjct: 247 VSDHAPVVLDLD 258 >gi|191639720|ref|YP_001988886.1| Endonuclease/exonuclease/phosphatase [Lactobacillus casei BL23] gi|190714022|emb|CAQ68028.1| Endonuclease/exonuclease/phosphatase [Lactobacillus casei BL23] gi|327383835|gb|AEA55311.1| Endonuclease/exonuclease/phosphatase family protein [Lactobacillus casei LC2W] gi|327387014|gb|AEA58488.1| Endonuclease/exonuclease/phosphatase family protein [Lactobacillus casei BD-II] Length = 355 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 96/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNL---DADIVFL 71 Q +++NI S S + + K + + Y+ + K + D+ F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSKKSVRTSINGVIKTTQAQNPDVAFY 110 Query: 72 QEMGSYNAVA------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ + K+ + + + A + Sbjct: 111 QEIDPDGDRSQHVNEVKMVTGAQQQYANVYGQNYDSAYLFYPFTQPIGKAKSGIITLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I Q + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + ID +++ N + Sbjct: 281 SKLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|270295842|ref|ZP_06202042.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273246|gb|EFA19108.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 287 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 93/305 (30%), Gaps = 61/305 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 A + V ++S+NI + ++ + W+ R +R Y D DI+ QE+ Sbjct: 22 QAPAPEPVNVMSFNIRYDNLEDSLDNWQYRKDRAA---NAIRFY----DVDILGTQEVLH 74 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------ 128 + + P + + ++A+ +K +L Y Sbjct: 75 NQLEDLKQRLP--EYGVIGVGREDGKEKGE------YSALWYKKDRFNLLDSGYFWLSET 126 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P + + A R A ++ +GK+ + L+ HL SL+ Sbjct: 127 PEVAGSKGWDGACERIASWAKLQDKVSGKEFFALNTHL-----DHVGVAARREGISLMLD 181 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS--- 243 + L +P V+ GDFN +D DP++ + S Sbjct: 182 KVNELSG--------NLPVVVTGDFN----ASPESDVIKHVTDPSNPEHLTDARQASAIV 229 Query: 244 --RCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + + Y LSDH Sbjct: 230 YGPAWSFHDFGKIPYDKRPLIDYVFV---------RNGLKVLRYGVLAETENNAFLSDHA 280 Query: 297 PISID 301 PI + Sbjct: 281 PILVT 285 >gi|294102135|ref|YP_003553993.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense DSM 12261] gi|293617115|gb|ADE57269.1| Endonuclease/exonuclease/phosphatase [Aminobacterium colombiense DSM 12261] Length = 359 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 25/214 (11%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++ + AS A + + ++NI + + + + L + A++ Sbjct: 4 VLAVVFLSIASQAMALSIGTFNIEYFNVSGKNAYSPSHC-------SSLAKTITTSQANV 56 Query: 69 VFLQEMGSYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + LQE+ + K P + + D T ++ + Sbjct: 57 LALQEIEGDATMRFFVTKFLPGWKY----AGNDTGGRQNLYFLWDTAT---IKLLDGPSA 109 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + R +R + ++ ++++HLKS + + + Sbjct: 110 YGANASFRFEGKSYRLNDRPHLVGTFLDKEGNRRFTLVNVHLKSQSIRGKDDKERAERYN 169 Query: 183 LLSQQAQW--LKDWITQKKESLVPFVIAGDFNRK 214 +QAQ + +T P I GD+N Sbjct: 170 KAKRQAQIAGINKLVTT---LKGPVFILGDYNTN 200 >gi|329890223|ref|ZP_08268566.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] gi|328845524|gb|EGF95088.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] Length = 315 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 87/298 (29%), Gaps = 57/298 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTT------SDYTLLRQYAKNLDA 66 + A VA + L W E+ + + + D + + + DA Sbjct: 64 MAALGAGVAGLLLLAVW-PQWTPEKGRAAGPETLTVYSANLWARNQDVAAIARSIEQADA 122 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L E+G A I R H D + A V+ Sbjct: 123 DVVMLIELGDAPAAQL------DTIL----RAYPHRVSTPRKDRPSGAA-----RSVIAS 167 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 PL +D+ + A+ E + + ++ +H+ + + Sbjct: 168 RLPLHRVRDADGQGL--AALVAQAETSLGPVSLIAVHM-TRPWPFQHPYGQIS------- 217 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 QAQ L + P V+AGDFN ++ + I LI P Sbjct: 218 QAQRLAG---LRAGLEGPVVVAGDFN-----SVSSGRIGRQIKAETGLIPAP--ARPGTW 267 Query: 247 ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID+ + L++ + SDH P+ + Sbjct: 268 PSALPPFLGITIDHVWRSPDLA--LVERRLGQKT------------GSDHRPVIVRLS 311 >gi|282857399|ref|ZP_06266634.1| endonuclease/exonuclease/phosphatase family protein [Pyramidobacter piscolens W5455] gi|282584783|gb|EFB90116.1| endonuclease/exonuclease/phosphatase family protein [Pyramidobacter piscolens W5455] Length = 282 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 26/200 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++NI + S T +D L + AD++ LQE+ + Sbjct: 25 MTIGTFNIEFFTMSGSS--EDRSQPYTPADMRELADSIRRSGADVLALQEIEGNATMRFF 82 Query: 84 FPKN--TWCIFYSTERLINHSKRDSNNDIHTAIA-----VRKKNVRVLQQSYPLLGAKDS 136 W F + N T + + R +S+ L Sbjct: 83 VATALPGWKYFGNDTDSTQDLFFLWNPTKVTLVGTPQLYYANRTGRFEGRSFKLFDRPPL 142 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKS----FCFLDSLENTYSPSCSLLSQQAQWLK 192 +R + +G + ++HLKS Y+ + + Q + L Sbjct: 143 VARFKD--------NASGNIYTLANVHLKSMTTIGRRDAEAARRYNLAKR--AAQTEKLN 192 Query: 193 DWITQKKESLVPFVIAGDFN 212 + + + E I GD+N Sbjct: 193 E-LAARMEG--ALFILGDYN 209 >gi|37993810|gb|AAR06982.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 30/234 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKENDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 197 DQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVP 250 >gi|121999171|ref|YP_001003958.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] gi|121590576|gb|ABM63156.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] Length = 277 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 93/321 (28%), Gaps = 78/321 (24%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQE--------GVSLWKNSVKRTTSD 53 +R+ A + + A +R+VS+NI G +R + Sbjct: 8 LREGAYATLHPTLSPEAPA--TIRVVSYNIQNAIATSRYHHYFTRGWKHVLPDRQR-QGN 64 Query: 54 YTLLRQYAKNLDADIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSK 103 + + + D+V LQE+ + +A W + T R + Sbjct: 65 LERIGGWIEPY--DLVGLQEVDAGSFRTGFMNQVEHLAYKADFPYW--YIQTNRNMGRLA 120 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + SN + R + + + P L R A+++ + + V+ +H Sbjct: 121 QQSN-----GLLARYRPAEIREHRLPGL--------IPGRGALQIRFGSGSEALNVIQVH 167 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + +Q +L + + + ++ GD N + Sbjct: 168 MALGR-------------RTRMRQMDFLAELVNAHR----HIIVMGDLN-----CQADSP 205 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + L + + R K ID+ ++ Sbjct: 206 ELLRLGRRTDLSEPIHGL----HTFPSWRPKHNIDHILISS--------------TLQVQ 247 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH PI+++ Sbjct: 248 RARVLEHALSDHLPIAMELAL 268 >gi|113953146|ref|YP_731259.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] gi|113880497|gb|ABI45455.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] Length = 274 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 92/308 (29%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N RT D + + ++ +AD++ LQE + Sbjct: 1 MQIASWNVN--------------SVRTRLD--HVLNWLEHSEADLLALQETKVDDPQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + I ++ N R D+ + LGA+ Sbjct: 45 EPFLQRGYQIHIHGQKAYNGVALISRTPLEDVRMGF----SAELLDDAEAKELGAQKRV- 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQ 197 + I+G ++ L + S D S SC L+ ++ Sbjct: 100 ---------ISALIDGVRVVNLYVPNGSSLSSDKYSYKLSWLSC---------LERYLRA 141 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPN--DSLIRFPK 239 + P + GDFN + D + P+ D+ F Sbjct: 142 IQTRDEPLCVMGDFNIGLEARDLPDPDRLTGGIMASDRERNALKAALGPDLQDAFRLFEP 201 Query: 240 EKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + R + ID+ +D+ S D + + SD Sbjct: 202 NSGHWSWWDYRSGAWDRGRGWRIDHIYLDETLRAVARSCSI-------DKQERGRIQPSD 254 Query: 295 HCPISIDY 302 H P+ +D Sbjct: 255 HAPVVVDL 262 >gi|288941776|ref|YP_003444016.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] gi|288897148|gb|ADC62984.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] Length = 278 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 83/279 (29%), Gaps = 66/279 (23%) Query: 62 KNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RK 118 LD DI+ LQE + FP + R + + R H +A+ K Sbjct: 24 AGLDPDILALQESKVADEQ-----FPLDW-------ARGLGYDVRIHGQKGHYGVALLSK 71 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 ++ + + P A+ + + +G ++ V++ + D + Sbjct: 72 QSPHSVVKGLPNDDAEAQRRLILGQYRLA-----DGDEVTVINGYFPQGEGRDHPLKFPA 126 Query: 179 PSCSLLSQQAQW-LKDWITQKKESLVPFVIAGDFN----------------RKIN----- 216 QQ L D++ V+ GD N R + Sbjct: 127 ------KQQFYAGLLDYLRTAFRPDQNIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCA 180 Query: 217 -YLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQN 265 + F W ID + ++ S + + P ID+ ++ Sbjct: 181 FLPEEREWFQALLDWGLIDAYRTRHPETADRFSWFDYRSRGFEREPKHGLRIDHILISAP 240 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LI D + SDHCP+ I D Sbjct: 241 LRERLIDVGI-------DYAIRAMDKPSDHCPVWITLDL 272 >gi|254436254|ref|ZP_05049761.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] gi|207089365|gb|EDZ66637.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] Length = 254 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 103/308 (33%), Gaps = 84/308 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAV 80 +++ +WN+N+L + ++ + + + D++ LQE + Sbjct: 1 MKIATWNVNSLRVR----------------FSQVVDWLEIHQPDVLALQETKLVDDSFP- 43 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + F + + YS ++ + +A+ Q +L + + Sbjct: 44 QEAFKEIGYHAAYSGQKT------------YNGVAI-----LCRQAPKDILTDLPNLVDS 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + V+ I +L++++ + + S + Y WL +E Sbjct: 87 QRRI-LGVTVDD----IRLLNLYVPNGSEVGSKKYAYK---------LDWLGRIKDYLQE 132 Query: 201 SLVPF---VIAGDFNRKINYLGNNDD-FWKT-----------------IDPNDSLIRFPK 239 +LV + ++ GDFN +D W + DS F + Sbjct: 133 ALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREALKEILALGFQDSFRLFEQ 192 Query: 240 EKDSRCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 E S RN+ ID ++ K L+ + ++ E R R SD Sbjct: 193 EAQSFSWWDYRGGAFRRNRGLRIDLILIS----KALVPKCTGCVIDKE---PRRLTRPSD 245 Query: 295 HCPISIDY 302 H P+ + Sbjct: 246 HAPVIATF 253 >gi|182437355|ref|YP_001825074.1| hypothetical protein SGR_3562 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465871|dbj|BAG20391.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 295 Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 71/299 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 +R+ ++NI + R T++ LR AD++ LQE+ + Sbjct: 43 PLRVATYNI----HAGAGVDGVFDLDRQTAELRALR-------ADVIGLQEVDRHWGDRS 91 Query: 78 -------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128 ++ ++ YS + R + +AV R + V Sbjct: 92 EWRDLAGELARRLRLHVSFAPIYSLDPA-----RPGDPRKEYGVAVLSRYRIVSAENHEI 146 Query: 129 PLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L +D E++V + G + V HL Y P ++ Q Sbjct: 147 TRLSTQDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQ 195 Query: 188 AQWLKDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ P ++ GDFN + W+ + D + Sbjct: 196 VA------DTRRIMAEDRGPKILLGDFNAEPAAPELA-PLWRELADADP--------GAP 240 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + ID+ + + I + + E SDH P+ D Sbjct: 241 TFPAQDPVKR--IDFVAVSRGGPGTGI--TVRKAWVPESVA-------SDHRPVVADLS 288 >gi|307316912|ref|ZP_07596354.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306897534|gb|EFN28278.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] Length = 261 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 75/257 (29%), Gaps = 46/257 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + D++ LQE+ A + + + + + D Sbjct: 39 DPARIAAVIAECQPDVIALQEVDVGRA--RTGGIDQAHMIATHLNMEAEFHPALHLEDEK 96 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AV L ++ PL S R A+ + +++ K+ V+ HL Sbjct: 97 YGDAVLTALPMRLIKAAPLP------SSGEPRGALWVEIDVAAVKLQVIVTHL--GLRGA 148 Query: 172 SLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWK 226 +QA L W+ E V+AGD N R Y + Sbjct: 149 ERL-----------RQATALLGPGWLGGMAEGDAHVVLAGDLNATGRSTAYRL----LAR 193 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + K ++ + ID+ ++ + E+ Sbjct: 194 QLS---DAQLLTGVKPRPTFPSRLPLLR--IDHVLVGKGV----------EVASCRVHGS 238 Query: 287 SRGKRLSDHCPISIDYD 303 + + SDH P+ + D Sbjct: 239 TLARSASDHLPLLAELD 255 >gi|240850841|ref|YP_002972241.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] gi|240267964|gb|ACS51552.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] Length = 260 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R L Q+ + DIV LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHE----TLCQWLQQSQPDIVCLQEIKS---IDEN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ + + +A+ L + P + + Sbjct: 42 FPRD-------AIENLGYHIETHGQKSFNGVAI-------LSKKTPDEVIRRLPGNDNDE 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---ITQK 198 + + + N + V ++L + ++S + +Y +W++ Sbjct: 88 QTRYIEAVYSTNKGVVRVASLYLPNGNPIESEKYSYK---------IEWMERLYTHAKSL 138 Query: 199 KESLVPFVIAGDFN---RKINYLGNNDD------------FWKTIDPND--SLIRFPKEK 241 P ++AGD+N ++ + ++ I IR + Sbjct: 139 LAYEEPLILAGDYNVIPAPLDAKKPQEWYQDALFLQETRKVFQRILNLGLYDAIRNVTDT 198 Query: 242 DS----RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S A +N ID+ ++ A LI +++ +++ + SDH Sbjct: 199 PSFSFWDFQAGAWPKNNGIRIDHLLLSPEAVDQLI------CAHSQTEVRGYQ-KPSDHV 251 Query: 297 PISIDYD 303 P+ I + Sbjct: 252 PVWIHLN 258 >gi|197105800|ref|YP_002131177.1| hypothetical protein PHZ_c2338 [Phenylobacterium zucineum HLK1] gi|196479220|gb|ACG78748.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 243 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 81/253 (32%), Gaps = 33/253 (13%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + L+ DIV LQE+ + I E + + Sbjct: 20 DVSRIAAVLAALNPDIVALQELD-VGRRRTNYADQAHEIAEQLEMACHFHAALQVEEERY 78 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A+ L + P L D R A+ + VEI GK + +++ HL Sbjct: 79 GDAILTAYPERLVKVGP-LPGYDRMRALEPRGALWVEVEIGGKPVQIINTHL--GLIPRE 135 Query: 173 LENTYSPSCSLLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + QA L W+ + P ++ GDFN ++T+ Sbjct: 136 QQ-----------IQAAHLAGTTWLD-HPDCRWPAILLGDFN-----ATATSVVYRTLTA 178 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 R + + + + + ID+ + ++ D +R Sbjct: 179 RLKAARRLTRRRTATSTFPSPLPVLRIDHVFVSPGIE--------VHDVFAPFDPLTRVA 230 Query: 291 RLSDHCPISIDYD 303 SDH P+ +D+D Sbjct: 231 --SDHLPLVMDFD 241 >gi|330961652|gb|EGH61912.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 379 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 101/321 (31%), Gaps = 61/321 (19%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDIADGSGPDDRPTPEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + + ++P +T ++ E + N H + T Sbjct: 129 LQGVDDGAKNSDYQDQLKLLEERLIDLYPCSTQAFYWKAEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + R A+ + +G K+ V++ L + Sbjct: 187 SRFHIDSAERLQLPVPDANLISRQFQPRNALLVSYLPLRDGGKLAVINTSLTT------- 239 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 + +Q + + + + P++I GDFN +++ Y + Sbjct: 240 AKRDGAA----QKQIAATETLLDKLEGGGTPWLIGGDFNLLPLGQYQRLPEPQRLGYAAD 295 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ W+ P +S + P D + + + S + Sbjct: 296 SELHKLWEK------YPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTVDYLFYSPALK 349 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 350 RVSARVRRDDTLLISDHLPVI 370 >gi|330720429|gb|EGG98744.1| Endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium IMCC2047] Length = 242 Score = 50.5 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 53/242 (21%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE + + + S + + + N + + Sbjct: 42 DVVALQEADGGSIRTGHLNQVKYLAEMSG-----FPYWYQQLNRNLGRFAQHSNGLLSRV 96 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L+ R R A+ + + + + +HL + Sbjct: 97 KPELIADHKLPGRLPGRGAIFMRYGKEDESLVFVVLHLSLG----------RRA------ 140 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 Q L ++ + VI GD N + ++ D +++ + + Sbjct: 141 QLDQL-AYVKELIADHKHVVIMGDLNTCAEKILHLSPLRDAKFQSPEGAGNTY------- 192 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R +D+ ++ + L + + Y LSDH P++++ Sbjct: 193 ------PSWRPVSNLDHILVSPD----LRVKWAEVVPYA----------LSDHLPLAVEI 232 Query: 303 DF 304 + Sbjct: 233 EM 234 >gi|15599104|ref|NP_252598.1| Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa PAO1] gi|9950092|gb|AAG07296.1|AE004808_6 Extracelullar DNA degradation protein, EddB [Pseudomonas aeruginosa PAO1] Length = 779 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 105/336 (31%), Gaps = 57/336 (16%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADI 68 P +V ++R+ S+N +N + G + T ++ + ADI Sbjct: 445 PAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADI 504 Query: 69 VFLQEMGSYN-----AVAKVFPK--------NTWCIFYSTERLINHSKRDSNNDIHTAIA 115 V L E+ + A+A + + + ++I + Sbjct: 505 VGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGS------DEIAVGLI 558 Query: 116 VRKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---FCF 169 R VR + F NR + + G+++ + HLKS C Sbjct: 559 YRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACD 618 Query: 170 LDSLENTYSPSCS-LLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D +C+ ++ AQ L W+ +I GD +N D Sbjct: 619 GDPDTGDGQGNCNLTRARAAQALVGWLAGDPTGAKEPDRLIIGD----LNSYAKEDPV-N 673 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKF-LIQESFSE 277 I ++ + + + +D+ + + + A ++ + + Sbjct: 674 VIRSAGYTDLVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRV 733 Query: 278 ILYN-------EDDIK--SRGKRLSDHCPISIDYDF 304 + YN + D + R SDH P+ I D Sbjct: 734 LDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDL 769 >gi|330969502|gb|EGH69568.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 380 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 105/320 (32%), Gaps = 58/320 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGSYN---------AVAK-----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LQ + A+ K ++P +T ++ E + N S ++ Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVTDLYPCSTQAFYWKAEFVPNPHIWGSVGRKLVTLS- 187 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R + P+ A + + A+ + +G K+ V++ L Sbjct: 188 RFHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT--------- 238 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGNN 221 T + +Q + + + + P++I GDFN +++ Y ++ Sbjct: 239 -TARHAGDTAQKQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEQQRLGYAADS 297 Query: 222 D--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + W D P +S P D + + + S S Sbjct: 298 ELHQLW------DKYPMIPNNAESSGIDRSKWLTHFPNDSRINGPDRTVDYLFYSPSLKR 351 Query: 280 YNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 352 VSARVRRDDTLLISDHLPVI 371 >gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054] Length = 270 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 65/308 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 VR+ +WNIN+++ + L ++ ++ D++ LQE Sbjct: 2 TVRIATWNINSVTAR----------------LPKLLEWLESAAPDVLCLQE---LKCATD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + +A+ + L A+ + Sbjct: 43 AFPA-------EAVAELGYESAAHGDGRWNGVALLSRIGLADVVR--DLPAQPGYRADDA 93 Query: 143 RRAVELLVEING-----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A +VE + V +++ + +D Y + L+D + Sbjct: 94 DPAEAPVVEPRAIAATCGPVRVWSVYVPNGREVDHAHYRYK------LEWMAALRDAVRD 147 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------ 245 PF + GDFN + D+ + L + + Sbjct: 148 DAAGGRPFAVLGDFN-----VAPTDEDVYDLAAFAGLTHVTAPERATLAALRELGLRDVV 202 Query: 246 -NANKNLRNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHC 296 K R DY + I +++ + + + R SDH Sbjct: 203 PRPLKYDRPYTFWDYRALAFPKNRGMRIDLTYANEPFADAVTDTYVDREARKGKGTSDHA 262 Query: 297 PISIDYDF 304 P+ +D D Sbjct: 263 PVVVDLDL 270 >gi|92117300|ref|YP_577029.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] gi|91800194|gb|ABE62569.1| Exodeoxyribonuclease III [Nitrobacter hamburgensis X14] Length = 266 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 96/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + +R L + D+V LQE+ Sbjct: 1 MRIATWNVN------------SVRQR----LDHLLAWLGETAPDVVCLQEIKCVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ N +A+ K + D SR Sbjct: 45 EAIEALGYNVVTHGQKTFN------------GVALLSKFPFDETRPRLAGDDGDVQSRF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + + ++L + ++ + Y + L ++ ++ +S Sbjct: 92 ----LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 141 Query: 202 LVPFVIAGDFN-----RKINYLGN--NDDFWK-----------TIDPNDSLIRFPKEKDS 243 FV+AGDFN R + +D ++ + D+L Sbjct: 142 EETFVLAGDFNVIPAPRDVYNPAAWVDDALFRPQTREAFQTLLGLGLTDALRAASDATGD 201 Query: 244 RC----NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 202 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSAVGI-------DRHVRGWEKASDHVPV 254 Query: 299 SIDYDF 304 ID D Sbjct: 255 WIDLDL 260 >gi|256113921|ref|ZP_05454714.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 3 str. Ether] gi|265995273|ref|ZP_06107830.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] gi|262766386|gb|EEZ12175.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] Length = 369 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 116/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGAHNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|157118577|ref|XP_001659160.1| nocturnin [Aedes aegypti] gi|108883222|gb|EAT47447.1| nocturnin [Aedes aegypti] Length = 446 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 16/162 (9%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHT 112 Y ++++ +N D DI+ LQE+ + + K+ + +F+ D+N Sbjct: 130 YQVIQEIVQN-DPDIICLQEVDHFKFLQKILATQNYEGVFFPKPDSPCLYINDNNGPDGC 188 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFL 170 A+ +K+ + +L +L S A+ + N ++I V HLK+ L Sbjct: 189 AVFYKKERLELLNHFTRILEVWRVQSNQVAIAALFRTRDTN-QEICVTTTHLKARKGALL 247 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L N +Q + L +I P ++ GDFN Sbjct: 248 SKLRN----------EQGKDLLYFIDG-VAEKRPVILCGDFN 278 >gi|254446687|ref|ZP_05060162.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198256112|gb|EDY80421.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 281 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 98/297 (32%), Gaps = 59/297 (19%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-TSDYTLLRQYAKNLDADIVFLQEMG 75 S ++++L+++NI + S RT + + + + DIV LQE+ Sbjct: 1 MESPKREIKLMTFNIAH--GRGLSLYQGFSSARTISKNLDRIAHIIREQQPDIVALQEID 58 Query: 76 S-------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + N + + + + H++RD + A K + Sbjct: 59 ASSHWNGHINLLDYLQSATDYPVSIHG----IHNRRDGRKPLAYGNAFLSKFPVKDWKVV 114 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + G + +E +G +I V+++HL S +Q Sbjct: 115 SF-----GEKKLGEKGFLEACFLADGTEIDVINLHL------------DFRSRRTRLRQV 157 Query: 189 QWLKDWITQKKESLVPF----VIAGDFNRKINYLGNNDDFWKTID---PNDSLIRFPKEK 241 L I Q+ P+ +I GDFN + ++D + I+ + FPK + Sbjct: 158 DQLIASIHQR-SLADPYHLPPIICGDFN--TSSRSSSDALHQLIERSAGEEDYHYFPKRE 214 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +D+ ++ + ++ + SDH P+ Sbjct: 215 RT----FPAHFPSRGLDFILLAA--------------PFEAENTEVIKSFASDHLPV 253 >gi|254430067|ref|ZP_05043774.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196196236|gb|EDX91195.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 300 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 77/266 (28%), Gaps = 65/266 (24%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + R+ + + + D+V LQE+ + ++ + ++ + Sbjct: 72 AHPRSVETIEQIAEVLSHF--DVVGLQEVDGGSLRSR---NMNQLVHLASMADFPFWHQQ 126 Query: 106 SNNDI------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 N ++ R + + P L R A+ + + + V Sbjct: 127 LNRNLGRLGQFSNGFLSRHQPFEITDHRLPGLPG---------RGAIVIKYGHPIQPLVV 177 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYL 218 + HL + + Q +L + + +V+ GDFN ++ +L Sbjct: 178 VVAHLALGEKVR-------------NTQLSYL-----ARLLADYKYVVMMGDFNCRLTHL 219 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFS 276 N L + N N ID+ ++ + L Sbjct: 220 -----------DNSPLAALGLQTVQADNLNTYPSWAPDRHIDHILLSPD----LESRHTR 264 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + LSDH P++ + Sbjct: 265 VLT---------DCLLSDHLPLATEI 281 >gi|163868656|ref|YP_001609865.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018312|emb|CAK01870.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 260 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 96/304 (31%), Gaps = 70/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNI R + Y L + DIV LQE+ S + + Sbjct: 1 MKIATWNI------------AGIKARHETLYQWL----QKSQPDIVCLQEIKS---IDES 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP++ + + +A+ L + P + + Sbjct: 42 FPRD-------AIENLGYHIETHGQKSFNGVAI-------LSKKTPDEVIRRLPGNDNDE 87 Query: 144 RAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + N + + ++L + ++S + +Y + + L Sbjct: 88 QTRYIEAVYSTNKGVVRIASLYLPNGNPIESEKYSYK------MEWMERLYAHTKSLLAY 141 Query: 202 LVPFVIAGDFN---RKINYLGNNDD----FWKTIDPND----------SLIRFPKEKDS- 243 P V+AGD+N ++ + + IR + S Sbjct: 142 EEPLVLAGDYNVIPTPLDAKKPQEWNQDALFLQKTRKAFQRILHLGLYDAIRNVTDTPSF 201 Query: 244 ---RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A LI +++ +++ + SDH P+ Sbjct: 202 SFWDFQAGAWPKNNGIRIDHLLLSPEAVDRLI------CAHSQTEVRGY-PKPSDHVPVW 254 Query: 300 IDYD 303 I + Sbjct: 255 IHLN 258 >gi|301632179|ref|XP_002945168.1| PREDICTED: exodeoxyribonuclease III-like [Xenopus (Silurana) tropicalis] Length = 263 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 86/306 (28%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE---MGSYNA 79 +R+ +WNIN+L+ R L + D + LQE Sbjct: 1 MRITTWNINSLA------------VRLPQVLDWLAA-----NPVDALALQELKLTDDK-- 41 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 FP + + + + +A+ + + G D +R Sbjct: 42 ----FPADAF-------AAAGYRAVVFGQKTYNGVAILSRYPMTDVVRN-IPGFADEQAR 89 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + ++ + +++ + + + + + Q L+DW+ + Sbjct: 90 V-----IAATLDTPTGPLRLVNGYFVNG----QAPGSDKFAYKMRWLQ--ALQDWLRSEL 138 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEK---------DSRCNAN 248 + GDFN ++D +TI + Sbjct: 139 ALHPRLALVGDFNVAPEDRDSHDPEGLRETIHHTTQERLHFQALLGLGLVDAFRLFVQPE 198 Query: 249 KNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 K+ ID+ ++ Q + + D + + K+ SDH Sbjct: 199 KSFSWWDYRMLGFQKNRGLRIDHILVSQMLAPLVSACAV-------DRLPRKNKQPSDHA 251 Query: 297 PISIDY 302 P+ + Sbjct: 252 PVVVTL 257 >gi|149914379|ref|ZP_01902910.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] gi|149811898|gb|EDM71731.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] Length = 343 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 104/346 (30%), Gaps = 68/346 (19%) Query: 24 VRLVSWNINT---LSEQEGVSLWKNSVKR----TTSD-YTLLRQYAKNLDAD-------- 67 +R+ ++N+ L + EG L + R T +D L LDAD Sbjct: 1 MRIATYNVEWFDALFDDEGALLADDDWSRRHGVTRADQLASLGIVFTALDADAVMVIEAP 60 Query: 68 --------IVFLQEMGSYNAVAKV-----FPKNTWC---IFYSTE--RLINHSKRDSNND 109 + L+ + + F +T + Y + + K + Sbjct: 61 DDTDRRSTVAALESFADFAQIRARRAVTGFANDTQQEIALLYDPDVLSCAHDPKGEPTGK 120 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 ++ A R V + +FS+ A G ++ HLKS Sbjct: 121 KGSSDAPRFDGVFRIDLDIDDTEDLVAFSKPPLELACT---TATGVAFRMIGAHLKSKAP 177 Query: 170 LDSLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN--------RKIN 216 + ++ ++ QA WL+ I + ++ GD N + Sbjct: 178 HKARSRDQIMRMAIANRRKQQAQAVWLRHRIEEHLAQGETLIVLGDLNDGPGLDEYEHLF 237 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKNLRNKIPIDYFVMD 263 + + + + P + + + + +DY ++ Sbjct: 238 GRSSVEIVMGEGGDAAAQLFDPHARRALTRRIGAMIATARFYLPTEKRYLQALLDYIMVS 297 Query: 264 Q----NAYKFLIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ I F + + +++ SDH P+++D D Sbjct: 298 SDLEARQPRWRIWHPFDDPGCFRIPELREALLAASDHFPVTMDVDL 343 >gi|329906029|ref|ZP_08274330.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium IMCC9480] gi|327547361|gb|EGF32191.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium IMCC9480] Length = 264 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 95/298 (31%), Gaps = 52/298 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 K+R+ ++NI +GVS + S R L+Q + A++ FLQE+ A Sbjct: 2 KIRIATYNI-----HKGVSSF-GSKPR----IVALKQALATMQANVYFLQEVQGRHDVLA 51 Query: 80 VAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 ++ + + H A+ + + Sbjct: 52 ARHAASWPGQSQHDFLAGDSHQAVYGMNAVYDHGHHGNALLSNLP-IASSRNQDVSDHKY 110 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 SR ++ ++ + +HL F +QA+ L + + Sbjct: 111 ESRGILH----CVIHLDDLPVHCYVVHL--GLFAGGRR-----------RQAEALIEAVL 153 Query: 197 QKKESLVPFVIAGDFNRKINYLGNN-------DDFWKTIDPN---DSLIRFPKEKDSRCN 246 P +IAGDFN N+L + + P+ S +R + D++ Sbjct: 154 DSAPPGAPVIIAGDFNDWGNHLSEALRSRLGVTEVFDERVPSVGMGSFLRRLRGPDAKIQ 213 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + +D+ + +S + + RLSDH PI Sbjct: 214 PART--FPAMLPFLQLDRIYVRGFAIDSAEVLH------GALWARLSDHAPIVATLQL 263 >gi|326777965|ref|ZP_08237230.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] gi|326658298|gb|EGE43144.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] Length = 295 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 71/299 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 +R+ ++NI + R T++ LR AD++ LQE+ + Sbjct: 43 PLRVATYNI----HAGAGVDGVFDLDRQTAELRALR-------ADVIGLQEVDRHWGDRS 91 Query: 78 -------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128 ++ ++ YS + R + +AV R + V Sbjct: 92 EWRDLAGELARRLRMHVSFAPIYSLDPA-----RPGDPRKEYGVAVLSRYRIVSAENHEI 146 Query: 129 PLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L +D E++V + G + V HL Y P ++ Q Sbjct: 147 TRLSTQDPNPAPAPAPGFGEVVVRVRGLPVHVYTTHL-----------DYRPDPAVRVAQ 195 Query: 188 AQWLKDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ P ++ GDFN + + W+ + D + Sbjct: 196 VA------DTRRIMAEDRGPKILLGDFNAEPSAPELA-PLWRELADADP--------GAP 240 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + ID+ + + I + + E SDH P+ D Sbjct: 241 TFPAQDPVKR--IDFVAVSRGGPGTGI--TVRKAWVPESVA-------SDHRPVVADLS 288 >gi|146297840|ref|YP_001192431.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152258|gb|ABQ03112.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 1133 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 104/325 (32%), Gaps = 48/325 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 L + + +V++N+ + + + + LDAD+ +Q Sbjct: 725 LTGSSLPKSDTFDVVTYNMEFFGAPTSAYGPADKALQMQNAV----KVINKLDADVYVVQ 780 Query: 73 EMGSYNAV--------------AKVFPKNTWCIFYSTERLINHSKRDSNNDIH------- 111 E+ S A+ KV +W + T + I+ Sbjct: 781 EISSDAAIDDLITQMNVNGKSFNKVV-STSWSYSWETNPSDPNYPPQKLVVIYDTKTTTL 839 Query: 112 --TAIAVRK--KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIH 163 T + ++ +R +S +S + R + +E N +I +D+H Sbjct: 840 KNTRVMFKEFYDELRAGTKSLTNYPGTNSNFFSSGRLPYMVTLETNLNGVKNEIKFVDLH 899 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL---GN 220 ++ D + LKD + ++ GD+N + G Sbjct: 900 ARANSGTDISRYNMR------KYDVEVLKDSLDTH-YGDSNIILLGDYNDDVKASVIAGQ 952 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + ++ E S+ A L + +D+ + + I ES +Y Sbjct: 953 PSSYQSFVTDTNNYKALTLEI-SQAGAYSFLSSGGFLDHITISNELFDQYINESI--AVY 1009 Query: 281 NE-DDIKSRGKRLSDHCPISIDYDF 304 + +DI + SDH P+ ++ Sbjct: 1010 DPRNDIANYTTTTSDHGPVIARFNL 1034 >gi|284031647|ref|YP_003381578.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283810940|gb|ADB32779.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 803 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 74/333 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 S A +V + ++N+ L +G + + + + DI+ L+E+ Sbjct: 481 TAPSSALQVSVATFNVENLDPSDGPAKFDGLAQAVVKNLAS---------PDILALEEVQ 531 Query: 75 -----------------GSYNAVAKVFPKNTW---CIFYSTERLINHSKRDSNNDIHTAI 114 + A + + I + + + +I A Sbjct: 532 DNDGATNSGSTGADLTLNTLAAAIRAAGGPKYAWRQI----DPVDGEEGGEPGGNIRVAF 587 Query: 115 AVRK------------KNVRVLQQSYPLLGAKDSFSRAGN-----------RRAVELLVE 151 R + + G + G R + Sbjct: 588 MYRTDRPVKFVDRPGGGSTTATAVTADKFGRPHLSASPGRVDPANPAWASARVPLAGEFS 647 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSP----SCSLLSQQAQWLKDWITQ--KKESLVPF 205 +G+ ++V+ H S D L P S + +QA+ ++ ++ Q K+ Sbjct: 648 WHGQSLFVVVNHFSSKGGDDPLWGRTQPPVQSSAAKRHEQARSVRGFVDQILAKDRGANV 707 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQ 264 ++ GD N + D +L P+ ++ + I D ++ Q Sbjct: 708 IVLGDIN-DFEFSTTTDIL--VGSGRTTLTSLPRTLPAKERYSYVFEGNSQILDQILISQ 764 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + S+ + N + ++SDH P Sbjct: 765 NLR---LASSYDIVHMNAE----FPDQISDHDP 790 >gi|288574052|ref|ZP_06392409.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569793|gb|EFC91350.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 341 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 39/227 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 +R++ ++ + AQ + + ++NI + + + D + L + Sbjct: 1 MRRFTKKVILGALLAVIWAAQAPALVIGTFNIEYFNVSGKKAY-------SQEDCSYLAR 53 Query: 60 YAKNLDADIVFLQEMGSYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D++ LQE+ + K P + S D+ Sbjct: 54 LIKESDVDLLALQEIEGDATMRFFVTKFLPGWAY------------SGNDTGGRQDLYFL 101 Query: 116 VRKKNVRVLQQSYP-----LLGAKDSFSRAGNRR---AVELLVEINGKKIWVLDIHLKSF 167 RK +VR+L + R +R + L +E ++ ++++HLKS Sbjct: 102 WRKDSVRILDGPVVYGANGSFRFEGKSYRLHDRPPMVGLFLDIE-GDRRFHMVNVHLKSQ 160 Query: 168 CFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKESLVPFVIAGDFN 212 + + + + Q + + P I GD+N Sbjct: 161 STRGKDDQDRAKRYNDFKRGAQIDGINGIV---GSLKGPVFILGDYN 204 >gi|241206881|ref|YP_002977977.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860771|gb|ACS58438.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 288 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 48/190 (25%) Query: 57 LRQYAKNLD-ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 L + A++L+ AD++ LQE+ A F + + ++ H + D Sbjct: 20 LARIARSLEGADVIALQEVTRGFSRNGFADMAADVAAFFPDYFWVY--GPACDMHVEADE 77 Query: 107 NNDIHT-------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 V + V ++ L ++ R A E +++ G I V Sbjct: 78 GGFQPVRGTRFQFGNMVLSRWPVVSTRTLLLPRSRTIGKINLQRGATEAVIDAPGAAIRV 137 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL----------------- 202 +HL D + +Q ++L I + Sbjct: 138 YSVHL------DHVSADERI------RQLEFLNAHINAFVQEGGSLTGGGEFDLPEPPLP 185 Query: 203 VPFVIAGDFN 212 +VI GDFN Sbjct: 186 EDYVIMGDFN 195 >gi|256824866|ref|YP_003148826.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] gi|256688259|gb|ACV06061.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] Length = 307 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 80/299 (26%), Gaps = 65/299 (21%) Query: 59 QYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + D+V LQE+ ++ + VF + + Y + A AV Sbjct: 21 HWLARRQPDVVSLQEVRCPVSLLPSGVFG--EYHLSYDPGDRAGRNGVAVLTREAPA-AV 77 Query: 117 RKKNVRVL-------QQSYPLLGAKDSFSRAGNRR---AVELLVEINGKKIWVLDIHL-K 165 R VL A + R + V++ + V ++L K Sbjct: 78 RTFGAPVLRRAPGEEHTELTEPDAGPTLPRELKEFAGEGRYIEVDLADAPVTVASLYLPK 137 Query: 166 SFCFLDSLEN-------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 D E Y L+ A+ L + FV+ GDFN Sbjct: 138 GGLPADLQEKMAKRMREAPDGGAKYDRKMRFLAGFAKQLDRSRKAAAAAGREFVVMGDFN 197 Query: 213 RKINY------------------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + + F + P + + Sbjct: 198 --VAHTERDVKNWRGNKNSEGFLPSEREWFGSILSPRTLVDVVRSQYPDTDGPYAWWSWM 255 Query: 255 ---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + + D SR +RLSDH P+ +DY Sbjct: 256 GQAFERDTGWRIDYHLATPTLARSVESAGV-------DKEPSRAERLSDHAPVVVDYRL 307 >gi|326539108|gb|ADZ87323.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M5-90] Length = 357 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 64/306 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 53 IAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRD 110 Query: 117 --RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKKIW 158 R + + + P L R R + + + I G+ + Sbjct: 111 TTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLS 170 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-- 212 + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 171 LFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFNDY 230 Query: 213 RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------RN 253 R+ +G ++ + + + + + R+ Sbjct: 231 RERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLERH 290 Query: 254 KIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHCPI 298 +DY + + + I E ++ + SDHCP+ Sbjct: 291 LCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHCPV 350 Query: 299 SIDYDF 304 S+ + Sbjct: 351 SVTLNM 356 >gi|307725679|ref|YP_003908892.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307586204|gb|ADN59601.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 258 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 46/204 (22%) Query: 15 PCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P AS A + +R+V++NI V KR+ + + + L+AD+V LQE Sbjct: 24 PAHASHAGEPLRIVTYNI-----HGAVGTDG---KRSGA---RIAEVISALNADVVALQE 72 Query: 74 M-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + S + + ++ + ++ R N + T + VR +R L S+ Sbjct: 73 VPLGGAASIDILRELQDLTG--MHAVPGPTLDGPDRRFGNAVLTNLPVRA--IRTLDLSF 128 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 A R A+++ ++ + ++ HL L + Q Sbjct: 129 GSREA---------RGALDVDIDTGNGLMRIVATHL-------GLSARERRA------QV 166 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + L + + +P ++ GD N Sbjct: 167 RLLLEAFDTPE---LPVILLGDLN 187 >gi|255536406|ref|YP_003096777.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] gi|255342602|gb|ACU08715.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] Length = 302 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 97/314 (30%), Gaps = 49/314 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R L + F C AQ ++++++NI L+ + R T LL Y Sbjct: 28 MKRLISLIMFVF---CLTVSAQNLKVMTYNIR-LALDSD--KENSWENRKTDALKLLNYY 81 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAVRK 118 D++ +QE + ++ S TA ++ Sbjct: 82 ----HPDVLGVQEAVPQQMSDLKNGLAGYNFVGVGRDDGSNKGEYSAIFFDTAKLQVLQS 137 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + D+ A+ + +K W ++H D + N Sbjct: 138 GTFWLSETPEKPSKGWDAAYNRICTFALFKT-KKGRRKFWAFNVHF------DHVGNIAR 190 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------- 231 + L L I + +P ++ GDFN L + K + N Sbjct: 191 EKSAAL-----ILSK-IKELNTKNLPVILTGDFN-----LTDKTTPMKILSENLSDTYRN 239 Query: 232 -DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 P + + NK + IDY + K L +S I +++ Sbjct: 240 CAQPSYGPTGTFTAFDVNKIPTER--IDYIFI-----KHLKCKSHRTINDRRENLLYP-- 290 Query: 291 RLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 291 --SDHFPVMAELKF 302 >gi|37993807|gb|AAR06980.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 30/234 (12%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 30 STNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVFD 83 Query: 77 YNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 +A ++ N + ++ + + D AI + +Q Sbjct: 84 NSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSPPEDGGVAIVSKWPIAEKIQ 143 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 144 YVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRT 196 Query: 186 QQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 Q + ++D+I K +V I GD N IN NND +KT++ + Sbjct: 197 NQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVP 250 >gi|87198716|ref|YP_495973.1| endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] gi|87134397|gb|ABD25139.1| Endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] Length = 245 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 91/291 (31%), Gaps = 65/291 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ S+NI +GV L + D + + +DAD++ LQE + + Sbjct: 2 KLKVASYNI-----HKGVGLDR------RRDPDRILTVLREIDADVIALQEADRRFGLRE 50 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT------AIAVRKKNVRVLQQSYPLLGAKDS 136 +S R++ D + A+ VR+ + + PL + Sbjct: 51 AVIPRAMLDDHSPWRVVEPGHYDRARTSSSMGWHGNALLVRRDIEVIDACAVPLPTLE-- 108 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + + G + VL +HL L QQ + + I Sbjct: 109 -----PRGAVCASLRLAGHVVRVLGMHL-------DLSGLRRR------QQIETICGHIE 150 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 E V+ GDFN + P+ + + ++ ++ P Sbjct: 151 DHPERGHA-VLMGDFN---------EW-----SPSGGALSAFADHLRVLAPGRSFPSRRP 195 Query: 257 I---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D V+ + + SDH P+ + Sbjct: 196 VAQLDRIVVSDGLH--VDAAGVHHSP--------LAAVGSDHLPVWAELRL 236 >gi|148255795|ref|YP_001240380.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] gi|146407968|gb|ABQ36474.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] Length = 263 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WN+N + +R L + K DIV LQE+ + +A + Sbjct: 1 MRIATWNVN------------SVRQR----IEHLVTWLKECSPDIVCLQEIKCTDDAFPR 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + ++ +A+ K +S +D +R Sbjct: 45 L-----------EIEALGYNVVTHGQKTFNGVALLSKLPFDETRSGLDGDVEDVHARF-- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +E +V + + + ++L + ++ + Y + L+D+ ++ ++ Sbjct: 92 ---LEGVVSLKHGVVRIACLYLPNGNPPNTEKYPYK------LKWMSRLRDYTRERLKTE 142 Query: 203 VPFVIAGDFNRKINYLGNN-------DDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN + D ++ +R + + Sbjct: 143 EPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESFQALLGLGLTDALRAVTDAPGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L++ D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGI-------DSYVRAWEKPSDHVPVW 255 Query: 300 IDYDF 304 D+D Sbjct: 256 ADFDL 260 >gi|325914373|ref|ZP_08176720.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] gi|325539381|gb|EGD11030.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] Length = 572 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 101/341 (29%), Gaps = 57/341 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTL-L 57 ++ L + V V +R+ S+N+ G + + RT + L Sbjct: 252 VLNPLTLPAMPTAVAPQ--VGGDLRIASFNLENFFNGNGRGGGFPTKRGARTHEQFQAQL 309 Query: 58 RQYAKN---LDADIVFLQEMGS---------------YNAVAKVFPKNTWCIFYSTERLI 99 + L AD+ L E+ + NA K W + Sbjct: 310 SKLVATIVPLQADVAALMELENDGDGADAAVAQLVAALNAAGK---DKDWQFVDTANGPG 366 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 ++ I + R V + + L G + +R + N +V Sbjct: 367 -------DDAIRVGMIYRNSQVTPVGKPATLTGGP---FDSHSRVPLAQAFRSNRGATFV 416 Query: 160 LDI-HLKS-FCFLDSLENTYS---PSC--SLLSQQAQWLKDWITQKKESLVP--FVIAGD 210 + H KS C S + +C + ++ A+ L W+ V+ GD Sbjct: 417 VVANHFKSKGCGNASGADADQQDGQACWNATRTESAKRLHQWLQTDPTGAQTKLAVLLGD 476 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 FN + + + K+ S + R +D+ ++ K L Sbjct: 477 FNAY-AMETPMRSLRASGWQDAFAVAGVKQPYSYVYDGMSGR----LDHALLSPAMAKQL 531 Query: 271 IQESFSEILYNEDDIKSRGK-------RLSDHCPISIDYDF 304 + + D K R SDH P+ + + Sbjct: 532 RGAVEWHVNADAMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] Length = 788 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLAPVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 788 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLAPVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] Length = 788 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLAPVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] Length = 738 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 439 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 489 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 490 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 548 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 549 VKLAPVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 607 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 608 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 666 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 667 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 718 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 719 HGRVSDHDPVLAQIDL 734 >gi|261332364|emb|CBH15359.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei gambiense DAL972] Length = 929 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 47/208 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMGS 76 +R+V+WN+ S G R D Y L Q + LDAD++ +QE+ Sbjct: 638 TLRVVTWNVQ-FSRHSGERTPLG---RDGIDWCTSTRYVALAQTLEGLDADVIGMQEVE- 692 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIA--VRKK--NVRVLQQS 127 WC + S + + S+ + VR+ + Sbjct: 693 ----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHAN 742 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P S +V G + V +HL + +++ N + Q Sbjct: 743 VPAFSGHTSVMPEVT------VVVSEGVPVTVGSMHLLAPYNQNNISNRTT--------Q 788 Query: 188 AQWLKDWITQK---KESLVPFVIAGDFN 212 L + + ++ GDFN Sbjct: 789 LDNLTKRLRTRPPINGKQAGLIVMGDFN 816 >gi|37993801|gb|AAR06976.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 92/235 (39%), Gaps = 30/235 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSAPDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK-INYLGNND----DFWKTIDPNDS 233 + Q + ++D+I K +V I GD N IN ND +KT++ + Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENKNDSEYASMFKTLNASVP 250 >gi|29293904|gb|AAO63566.1| RNA editing complex protein MP99 [Trypanosoma brucei] Length = 907 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 47/208 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMGS 76 +R+V+WN+ S G R D Y L Q + LDAD++ +QE+ Sbjct: 616 TLRVVTWNVQ-FSRHSGERTPLG---RDGIDWCTSTRYVALAQTLEGLDADVIGMQEVE- 670 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIA--VRKK--NVRVLQQS 127 WC + S + + S+ + VR+ + Sbjct: 671 ----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHAN 720 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P S +V G + V +HL + +++ N + Q Sbjct: 721 VPAFSGHTSVMPEVT------VVVSEGVPVTVGSMHLLAPYNQNNISNRTT--------Q 766 Query: 188 AQWLKDWITQK---KESLVPFVIAGDFN 212 L + + ++ GDFN Sbjct: 767 LDNLTKRLRTRPPINGKQAGLIVMGDFN 794 >gi|21218691|ref|NP_624470.1| secreted protein [Streptomyces coelicolor A3(2)] gi|5708245|emb|CAB52358.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 279 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 73/257 (28%), Gaps = 51/257 (19%) Query: 53 DYTLLRQYAKNLDADIVFLQEM-----------GSYNAVAKVFPKNTWCIFYSTERLINH 101 D + + AD+V LQE+ +A++ + + + + N Sbjct: 57 DLRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLG---YHVVF-GANIDNS 112 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + A+ + + L + R +++ +GKK+ + Sbjct: 113 PPAPGGHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDV----HGKKVEFYN 168 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D L QQ + D I +K P ++ GDFN Sbjct: 169 THLAAGSQADRL------------QQTAQVVDLIGTRK----PGILVGDFN--------- 203 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 P R + + A Y LI + Sbjct: 204 ------ALPAAPESRPLQNAYTDAWAKSLHARGDGATYPAQSPTERIDLIYATRRVTPLV 257 Query: 282 EDDIKSRGKRLSDHCPI 298 +K SDH P+ Sbjct: 258 AQVLKDDPAA-SDHRPL 273 >gi|71747102|ref|XP_822606.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei TREU927] gi|70832274|gb|EAN77778.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei] Length = 907 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 47/208 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD------YTLLRQYAKNLDADIVFLQEMGS 76 +R+V+WN+ S G R D Y L Q + LDAD++ +QE+ Sbjct: 616 TLRVVTWNVQ-FSRHSGERTPLG---RDGIDWCTSTRYVALAQTLEGLDADVIGMQEVE- 670 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHS-----KRDSNNDIHTAIA--VRKK--NVRVLQQS 127 WC + S + + S+ + VR+ + Sbjct: 671 ----------PAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHAN 720 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P S +V G + V +HL + +++ N + Q Sbjct: 721 VPAFSGHTSVMPEVT------VVVSEGVPVTVGSMHLLAPYNQNNISNRTT--------Q 766 Query: 188 AQWLKDWITQK---KESLVPFVIAGDFN 212 L + + ++ GDFN Sbjct: 767 LDNLTKRLRTRPPINGKQAGLIVMGDFN 794 >gi|167579454|ref|ZP_02372328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis TXDOH] gi|167617551|ref|ZP_02386182.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis Bt4] gi|257140578|ref|ZP_05588840.1| endonuclease/exonuclease/phosphatase [Burkholderia thailandensis E264] Length = 270 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 56/244 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VA ++ VSWN++ G + W +R + ++ ADI FLQE Sbjct: 9 LAEPLPVANEITAVSWNLHKGRSPLGFTAW-----------NAMRNWVESTHADIYFLQE 57 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIA----------------- 115 A+A+ P+ + S D + T IA Sbjct: 58 -----AMARRMPRP---VLASGFGTPMTEPADDIWHCQATEIAHALDWQIALGPNVFKPS 109 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R N + L G D + RR + + G + +L HL Sbjct: 110 WRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLGGGAPVTLLCAHL--------- 160 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + L +Q W+ WI ++ P V+AGDFN ++ ++ + I ++ Sbjct: 161 --ALTRAARL--RQMHWIAHWI-ERNAGAGPLVLAGDFN---DWRNDSIPLFGEIGLSEV 212 Query: 234 LIRF 237 Sbjct: 213 ATLL 216 >gi|158424436|ref|YP_001525728.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] gi|158331325|dbj|BAF88810.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] Length = 262 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 97/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +R+ +WN+N + RT L++ D+V LQE+ + Sbjct: 1 MRIATWNVN------------SVRLRTEHAVAWLKE----AQPDVVCLQEIKCQTEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + ++ N +A+ K + D +R Sbjct: 45 EPFEALGYNVAVHGQKGFN------------GVAILSKRPLEDVTNGLAGDDSDVQARF- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + G + V I+L + + + Y L A+ LK + + + Sbjct: 92 ----IEAVVSVPGGVVRVCCIYLPNGNPPQTEKYDYK-----LGFMAR-LKAFTESRLKL 141 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP--NDSLIRFPKEKDSR 244 P ++AGDFN YL ++ I +R + + Sbjct: 142 EEPLILAGDFNVIPDARDAADPAAWVEDALYLPRTRAAFREIINLGMTDALRATSDAERL 201 Query: 245 C-----NANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A R I ID+ ++ A LI D +R SDH P Sbjct: 202 FTFWDYQAGAWQRDFGIRIDHLLLSPQAADRLIGAGI-------DKHLRALERPSDHVPA 254 Query: 299 SIDYDF 304 ID Sbjct: 255 WIDLKM 260 >gi|146308751|ref|YP_001189216.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145576952|gb|ABP86484.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 362 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 44/313 (14%) Query: 21 AQKVRLVSWNINTLSEQEGV-----SLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WN+ L+ + V +R +SD + + ++ D+V Sbjct: 51 GQALKVMTWNVQYLAGKRHVFWYDLPGGDGPDERPSSDDLAATLDEVVRVLRDEQPDLVL 110 Query: 71 LQEMGSYN---------AVAKVFPKNTW----CIFYSTERLINHSKRDSNNDIHTAIAVR 117 LQE+ A+ + + + FY + H + + + R Sbjct: 111 LQELHDGAKASDYQDQLALLQERLADLYPCSSQAFYWKAAFVPHPRILGSVGMKLGTLSR 170 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + R + P + + + +RA+ + G ++ ++ H +F D Sbjct: 171 FQIARAERLQLPEIPSDPLSRQFQLKRALLVSHLPIRGGGELVAINTHFDAFAQGDD--- 227 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN 231 + +Q Q + Q + P+++ GD N + +L N W D Sbjct: 228 -------TMRRQVQMTDALLQQLQAGASPWILGGDLNLLPPGQFQHLPENQRGWYAADSE 280 Query: 232 -----DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P + + P D + + S + + Sbjct: 281 LQDLAGRYPMIPSLQQASGAQQAQWYTHYPNDPAASGPDRTLDYLFYSPRLTPFASQVRQ 340 Query: 287 SRGKRLSDHCPIS 299 +SDH P+ Sbjct: 341 HDTLGISDHLPVI 353 >gi|83649180|ref|YP_437615.1| extracellular nuclease [Hahella chejuensis KCTC 2396] gi|83637223|gb|ABC33190.1| predicted extracellular nuclease [Hahella chejuensis KCTC 2396] Length = 835 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 97/334 (29%), Gaps = 59/334 (17%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-------LDA 66 + A +++ S+N +N + + S TT+ L + A +DA Sbjct: 457 APVTTGAGNLKVASFNVLNYFNGDGQGGGFPTSRGATTA--EELERQAAKTVAALLAMDA 514 Query: 67 DIVFLQEMGSYN-----AVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D+V L E+ + A+ + + + + ++I + + Sbjct: 515 DVVGLMEIENDGYGADSAIQDLVNRLNAAGANYAVVNPGLSALG------GDEIAVGM-I 567 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLEN 175 K + + L + + A + N KI V+ H KS C +N Sbjct: 568 YKADKVTPAGAAKSLSSYPFDNFNRQPLAQTFSLNDNDGKITVVVNHFKSKGCTNAEGDN 627 Query: 176 TYSPS---CSLLSQQ--AQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 C + A L DW+ +I GD +N D Sbjct: 628 QDQGDGQGCYNAKRSEAAVALADWLASDPTGAEDADVLIIGD----LNAYAKEDPIMAL- 682 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 E + + + +D+ + ++ ++ S I +E Sbjct: 683 -QTQGYHNLLAELNGDAAYSYVFSGETGYLDHALASESLRSQVVGVSEWHINGDEPRALD 741 Query: 288 R-----------------GKRLSDHCPISIDYDF 304 R SDH P+ ++ Sbjct: 742 YNVEFKTDAQVLSLYSPDAFRSSDHDPVIVEISL 775 >gi|319954572|ref|YP_004165839.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319423232|gb|ADV50341.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 279 Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 90/308 (29%), Gaps = 43/308 (13%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K V L+ Q ++S+NI +G + W R L+ Y Sbjct: 3 KLVNFLLTIFCFSAMGYGQVTSIMSYNIRLDVASDGENAWP---LRKDFVIDQLKFY--- 56 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DI +QE + + + + + V ++N Sbjct: 57 -SPDIFGIQEGTPQQTAYLAAQLKDYKFIGVGRDGGDKGEYSAIFYNSSQFTVAEENTFW 115 Query: 124 LQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 L ++ + D+ + + +K WV + HL + + + Sbjct: 116 LSETPTEVSMGWDAACNRVCTYGLF-TNKDTKEKFWVFNTHL-------DHKGARARA-- 165 Query: 183 LLSQQAQ--WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT----IDPNDSLIR 236 Q L I + P V+ GDFN L D+ T + + Sbjct: 166 ----QGVQLILNK-IKEVNTKDYPVVLTGDFN-----LEPTDEVIATVKNVLIDAKEVAH 215 Query: 237 FPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + NA K K IDY F+ + Y K SDH Sbjct: 216 LTFGPEGTFNAFKFTTAVKRRIDYI--------FIAPNQVNVTKYAVLSDSKDLKYPSDH 267 Query: 296 CPISIDYD 303 P+ I+++ Sbjct: 268 LPVYIEFE 275 >gi|325282271|ref|YP_004254812.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] gi|324314080|gb|ADY25195.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] Length = 326 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 34/191 (17%) Query: 28 SWNINTLSEQEGVSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +W++ ++L ++ R T L + DAD+V LQE Sbjct: 93 TWHLPQPVPPGSLTLLTYNIARGTQGSAETLAAQIRAQDADLVTLQE------------T 140 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 N W ++ E L HT + P+LG+++ RR + Sbjct: 141 NGWDAEFTPELLRRLPGYH---AAHTG----AGGELLTLSRLPVLGSREVHLPETTRRFL 193 Query: 147 ELLVEINGKKIWVLDIH----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 V+ ++ V+++H + S F + T + + L + Q++ + Sbjct: 194 VTTVQTPRGQLDVVNVHFSTVMVSGVFRGQVIPTRNRRATQLDR---------LQRETAQ 244 Query: 203 VP-FVIAGDFN 212 +P ++AGDFN Sbjct: 245 LPRVLVAGDFN 255 >gi|319639504|ref|ZP_07994253.1| exodeoxyribonuclease III [Neisseria mucosa C102] gi|317399270|gb|EFV79942.1| exodeoxyribonuclease III [Neisseria mucosa C102] Length = 256 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLNVR----------------LPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAI-----ISRHEPQDVHCGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATI----NGVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRAEMAAHP 139 Query: 204 PFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + + + W + L ++ Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKVHPEGAFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + L + D +R SDH P+ Sbjct: 200 WFDYRGAMFQRKLGLRIDHILTSPELAANLTDVTV-------DLETRAQERPSDHAPVIA 252 Query: 301 DYD 303 ++D Sbjct: 253 EFD 255 >gi|269954850|ref|YP_003324639.1| endonuclease/exonuclease/phosphatase [Xylanimonas cellulosilytica DSM 15894] gi|269303531|gb|ACZ29081.1| Endonuclease/exonuclease/phosphatase [Xylanimonas cellulosilytica DSM 15894] Length = 329 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 68/223 (30%), Gaps = 47/223 (21%) Query: 94 STERLINHSKRDSNNDIHTAIA------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 S R + ++ IA VR+ L P L + R AV Sbjct: 137 SRRRAR---GDEPDDVPAYGIALISRYPVRQWRQVRLPLGSPWLFGRLQLGTDQPRVAVC 193 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFV 206 +VE + V+ HL S Q Q W+ ++ + P V Sbjct: 194 AVVETPDGPLTVVTTHLSSG---------------STWNQTQL--RWLAERLRGAPRPLV 236 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + GD N + + W+ + D+ R R I ID+ ++D A Sbjct: 237 LMGDLNLRGSVPTEL-TGWRDLVEIDTYPR--------------HRPWIGIDHVLVDDVA 281 Query: 267 YKF---LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 + + +R L SDHC + +D Sbjct: 282 PAVGEPIDPGAPHPGGRVHSLAPARAVDLGISDHCAVVVDVRL 324 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 11/55 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A +RL ++N+ +G L L AD+V LQE+ Sbjct: 3 AMSLRLATFNVQHGRMPDGRVDPPF-----------LAAAVSTLRADVVALQEVD 46 >gi|207724128|ref|YP_002254526.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] gi|206589337|emb|CAQ36299.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] Length = 269 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 92/318 (28%), Gaps = 91/318 (28%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +R+ +WN + L E+E + D++ LQ Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPI----------------------DLLCLQ 38 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK---KNVRVLQQS 127 E+ P + + + ++ + + +A+ RK R + ++ Sbjct: 39 ELK--------LPDDRYP--LAELDAAGYASLFTGQKTYNGVAILARKAAMPEGRDVIKN 88 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + V ++ G + V+ + + LDS + Y + Sbjct: 89 IPGFADEQQRI-------VAATYDVAGGPVRVISAYFPNGQALDSDKMVYK------MRW 135 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCN 246 L+DW+ + ++ ++ GDFN + +D W+ ++ R Sbjct: 136 LAALQDWLKAEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLVSPEERAAFRALESAG 195 Query: 247 ANKNLR-------------NKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDD 284 R ++ ID+ ++ + D Sbjct: 196 LVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQRCESCHI-------DR 248 Query: 285 IKSRGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 249 APRGWEQPSDHTPVVAAL 266 >gi|308504898|ref|XP_003114632.1| hypothetical protein CRE_28560 [Caenorhabditis remanei] gi|308258814|gb|EFP02767.1| hypothetical protein CRE_28560 [Caenorhabditis remanei] Length = 351 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 31/146 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--V 80 ++ ++SWNI+ L + + K + Q K+++ DI+FLQE+ + + Sbjct: 107 EINVMSWNIDGLDGRSLATRMK-----------AVAQIVKSVNPDILFLQEVVDRDLGPI 155 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K+ ++ + I+YS +TAI V K + Sbjct: 156 DKL--QSLYKIYYSNRGC----------QYYTAILVSKMFEVEKH------DVIHFQNSG 197 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKS 166 R + I G K+++L+ HL+S Sbjct: 198 MYRTLQIVEGSIGGIKVFLLNTHLES 223 >gi|170749328|ref|YP_001755588.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] gi|170655850|gb|ACB24905.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] Length = 264 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 98/305 (32%), Gaps = 70/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + + D+V LQE+ + + Sbjct: 1 MRITTWNVN------------SIKQR----LPHLLGFLEEARPDVVCLQELKCQD---ES 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSRAG 141 FP+ ++ + +A VR + A D+ + Sbjct: 42 FPRAD-------IEAAGYAVETLGQKAYNGVALLVRAPLAMSKIRRGLPGDADDAQA--- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKE 200 R L+ + + + V I+L + +DS + Y + L A+ L E Sbjct: 92 -RYIEALISGADTRPVRVASIYLPNGNPVDSPKYPYKLAFLERLRLHARAL-------LE 143 Query: 201 SLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPND-SLIRFPKEKDS--RCNA--- 247 + V+AGD+N +D + I D+ C+ Sbjct: 144 DEIAVVLAGDYNVIPEAADAADPEAWRSDALFLGTTRAAFRAILAEGYTDALRACDPRDG 203 Query: 248 ---------NKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 RN ID+ ++ A L+ S + L D + SDH P Sbjct: 204 LYTFWDYQAGCWQRNAGIRIDHLLLSPQAGDRLVSASVQKHLRGLD-------KPSDHVP 256 Query: 298 ISIDY 302 ++ + Sbjct: 257 VTAEL 261 >gi|167561163|ref|ZP_02354079.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia oklahomensis EO147] gi|167568380|ref|ZP_02361254.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia oklahomensis C6786] Length = 268 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 82/243 (33%), Gaps = 54/243 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + ++ VSWN++ G + W +R + ++ AD+ FLQE Sbjct: 9 LAEPQPAENEITAVSWNLHKGRSPLGFTAW-----------DAMRSWVESTHADVYFLQE 57 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----------------V 116 A+A+ P+ + R + D + T IA Sbjct: 58 -----AMARRMPRP--MLASGFGRPMAEPVDDVWHCQATEIARALDWQIALGPNVFKPSW 110 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R N + L G D + RR + + G + +L HL Sbjct: 111 RHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGGAPVTLLCAHL---------- 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + L +Q W+ WI + + P V+AGDFN ++ ++ + I ++ Sbjct: 161 -ALTRAARL--RQMSWIAHWIERHASTG-PLVLAGDFN---DWRNDSIPLFGEIGLSEVA 213 Query: 235 IRF 237 Sbjct: 214 TLL 216 >gi|300113189|ref|YP_003759764.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] gi|299539126|gb|ADJ27443.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 289 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 91/306 (29%), Gaps = 65/306 (21%) Query: 11 FFLVPCTASVAQ---KVRLVSWNIN----------TLSEQEGVSLWKNSVKRTTSDYTLL 57 L + S AQ +RL+S+NI L+ L R + Sbjct: 4 LALCSPSTSSAQEQHSLRLLSYNIQAGVTTTRYHHYLTRSWKHILPDG---RRHQTLASI 60 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 Q D DIV LQE S ++ F + E IA + Sbjct: 61 AQVIS--DFDIVGLQEADS-GSLRTGFVNQAKLL---AELCDFTYLHQQATRRFANIA-Q 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + N + + L R A+ + VL IHL Sbjct: 114 QSNALLSRIQPSYLRTYRLPGLVPGRGAILAHFGNPKNPLIVLMIHLALG--------RR 165 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S + QQ ++ + + P+V+ GD N +I + + + + Sbjct: 166 SRT-----QQLDFISNLV-----HNHPYVVVMGDLNCQI-HSPELRALLRKTGLKAPVTK 214 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 P + R K ID+ ++ S I + + +SDH Sbjct: 215 IPT--------YPSWRPKRHIDHILVSP---------SLEVI-----QVCALAHAVSDHL 252 Query: 297 PISIDY 302 P++ + Sbjct: 253 PLATEI 258 >gi|262371629|ref|ZP_06064908.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262311654|gb|EEY92739.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 446 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 98/297 (32%), Gaps = 44/297 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ A +++++S+NI L + +R L Y D++ LQE Sbjct: 172 PVSNSADELKVLSYNIYAL-----PMVASKISERLAELPNHLNGY------DVILLQEAF 220 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAV--RKKNVRVLQQSYPLLG 132 S + + + N H S +++ + + V R V+ + YP Sbjct: 221 SSSRTSML---NQ---LAQQYPYQTHVPVGSGYNLYDSGVLVLSRYPIVKTAEMIYPDCT 274 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-QAQWL 191 D F+ G A + NGK V H SF + L Q Q + + Sbjct: 275 GTDCFADKGVIYAEIIK---NGKAYHVTSTHTASF---------DTDEARALRQVQFKQI 322 Query: 192 KDWITQKKESLVPFVIAG-DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + I Q+ V+ G DFN +L D + N + S + N Sbjct: 323 RQLINQQNIPSFDAVLMGGDFNVN-KFLWPQDYQDMLTNLNATAPISTGYTASTFDPRVN 381 Query: 251 L---------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY V + + + IL + D LSDH P+ Sbjct: 382 KLAGAAGSGGTTVEYLDYVVSSNTHRQPIQSRNDVRILRSTADPLYMTWDLSDHFPV 438 >gi|254719412|ref|ZP_05181223.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. 83/13] gi|265984415|ref|ZP_06097150.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306839189|ref|ZP_07472006.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] gi|264663007|gb|EEZ33268.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306405736|gb|EFM61998.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] Length = 369 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLVRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + + + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAVRRIIEEKFGIDRVAERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|254694063|ref|ZP_05155891.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|261214359|ref|ZP_05928640.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|260915966|gb|EEX82827.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] Length = 369 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGQDGRPSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|306844277|ref|ZP_07476869.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] gi|306275349|gb|EFM57090.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] Length = 369 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 115/368 (31%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + + + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHVVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|311276364|ref|XP_003135157.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Sus scrofa] Length = 515 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 100/333 (30%), Gaps = 85/333 (25%) Query: 24 VRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+VSWNIN + G N R + + LDADIV LQE Sbjct: 2 LRVVSWNINGIRSHLQGAGYEEPSNCTAR------AVGRILDKLDADIVCLQET---KVT 52 Query: 81 AKVFPKN-----TWCIFYS-TERLINHSKRDSN-NDIHTAIAVRK---KNVRVLQQSYPL 130 V + + ++S + +S + D T +A + + L Sbjct: 53 RDVLTEPLAIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATLNGDVNC 112 Query: 131 LGAKDSFSRAGNRR----AVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSP 179 G D F++ R LL + + K + V++++ C + P Sbjct: 113 YGNMDEFTQEELRALDSEGRALLTQHKIRTQDGDEKSLTVINVY----C---PHADPGKP 165 Query: 180 SCSLLSQQAQWLKDWITQKK--ESLVPFVIAGDFN---RKINYLGN-----------NDD 223 + L I + + +I GD N R I++ Sbjct: 166 ERLTFKMRFYHLLQ-IRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKW 224 Query: 224 FWKTIDP------------NDSLIRFPKEKDS--RCN----ANKNLRNKIPIDYFVMDQN 265 + DS F ++ C ++L IDY + D+ Sbjct: 225 MDGLLSNLRCQAGSHMGPFIDSYRYFQPKQKGAFTCWSTVTGARHLNYGSRIDYVLGDRA 284 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Q SF SDHCP+ Sbjct: 285 LVMDTFQSSFV----------LPEVMGSDHCPV 307 >gi|260430974|ref|ZP_05784945.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414802|gb|EEX08061.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 337 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 103/340 (30%), Gaps = 62/340 (18%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKR----TTSDYTLLRQYAKNLDAD-------- 67 +RL ++NI + + + + + R + +DAD Sbjct: 1 MRLATYNIEWFANLFDRDDKLIVDDSWSGRRNVTKAQQVEAIATVLTAIDADAILIVEAP 60 Query: 68 --------IVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT- 112 + LQE + NA+ + + + + D D T Sbjct: 61 NTGKSQNTVRALQEFAETFELRTTNAIMGFANETHQELAVLYDPARLRVRHDPIGDRETD 120 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLD 171 A + + A + R ++ +EL E + + ++ HLKS Sbjct: 121 GFAGDAPRFDGEFRIDLDIDATEDIVRF-SKPPLELAAESSDGFQFRMIGAHLKSKAPHG 179 Query: 172 SLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN--------RKINYL 218 + S+ ++ QA WL + ++ P V+ GD N + Sbjct: 180 AESRDALIRISIANRRKQLAQAVWLSHRVKAHLDAGEPVVLLGDLNDGPGLDEFENLFGR 239 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQNAY-- 267 + + +T + R P +DY ++ + Sbjct: 240 SSVEILLQT--GLYDPHAAQACRRRPGWIPSTARFPRPEEGQYLEALLDYIMISPDLRAR 297 Query: 268 --KFLIQESFS-EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I F E ++ +++ SDH P+++D D Sbjct: 298 RPAWRIWHPFRDEHCWSVPELRDALVTASDHFPVTLDIDL 337 >gi|297537413|ref|YP_003673182.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] gi|297256760|gb|ADI28605.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] Length = 260 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 97/308 (31%), Gaps = 74/308 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA 79 + +L +WN+N+L+ R LR + D++ LQE ++ Sbjct: 3 SGTFKLATWNVNSLNV------------RLQHVLDWLRD-----NPIDVLCLQETKQEDS 45 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 Y+ + ++ S + +A+ + + + + + +D R Sbjct: 46 ----------KFPYTELKEAGYNAIHSGQKTYNGVAILSTH-DMTEVEHGIADFEDGQKR 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ + V+ +++ + +DS + Y + L W+ + Sbjct: 95 ---------VISATINGVRVVCVYIVNGQAVDSEKYEYK------MRWLTALNTWLAGEL 139 Query: 200 ESLVPFVIAGDFNRKINYLGNND---DFWK---------------TIDPNDSLIRFPKEK 241 + V+ GD+N +D + + +DS F + + Sbjct: 140 KKYPKLVVLGDYNIAPEDRDCHDPAAWLGQILVSPQEREHFQKLLQLGLHDSFRLFEQAE 199 Query: 242 DSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S + ID+ ++ I + D + +R SDH Sbjct: 200 KSFSWWDYRMMGFRRNFGMRIDHILVSDALKSACIAATI-------DKAPRKLERPSDHT 252 Query: 297 PISIDYDF 304 P+ ++ Sbjct: 253 PVILELGL 260 >gi|307308162|ref|ZP_07587877.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|306901365|gb|EFN31970.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 265 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 74/257 (28%), Gaps = 46/257 (17%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIH 111 D + D++ LQE+ A + + + + + D Sbjct: 39 DPARIAAVIAECQPDVIALQEVDVGRA--RTGGIDQAHMIATHLNMEAEFHPALHLEDEK 96 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 AV L ++ PL S R A+ + +++ K+ V+ HL Sbjct: 97 YGDAVLTALPMRLIKAAPLP------SSGEPRGALWVEIDVAAVKLQVIVTHL--GLRGA 148 Query: 172 SLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWK 226 +QA L W+ V+AGD N R Y + Sbjct: 149 ER-----------LRQATALLGPGWLGGMAHGDAHVVLAGDLNATGRSTAYRL----LAR 193 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + K ++ + ID+ ++ + E+ Sbjct: 194 QLS---DAQLLTGAKPRPTFPSRLPLLR--IDHVLIGKGI----------EVASCRVHGS 238 Query: 287 SRGKRLSDHCPISIDYD 303 + + SDH P+ + D Sbjct: 239 TLARSASDHLPLLAELD 255 >gi|255953047|ref|XP_002567276.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588987|emb|CAP95108.1| Pc21g02110 [Penicillium chrysogenum Wisconsin 54-1255] Length = 449 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 104/324 (32%), Gaps = 42/324 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++ +L+++ + A+ K +S+N+ L + + T + LL Y Sbjct: 1 MKTILLSVLLPALASAATTNGKFTALSFNVAGL---PSILQSNDVNGTKTENAKLLGTYF 57 Query: 62 KNLDADIVFLQEMGSYNAVAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAI-AVRK- 118 DI+ +QE+ + V N Y T+ + I + + + Sbjct: 58 SEYGYDIINMQEV----PLHPVSLDFNYHAYIYETDTHAYRTATSGGAAIGSGLNTISNY 113 Query: 119 ---KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 RV D + G +G + ++H + + Sbjct: 114 NWVDFARVKWNKCSDASGSDCLTPKG--FTFMRWNPADGVYVDFYNLHADAGTEDEDETA 171 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------------DD 223 S L Q A ++ W + V+ GD N + + D Sbjct: 172 RNSN----LQQVADYIDTW-----STGNAVVVMGDTNSRYTRAKDTAIRVFKSQNTLADP 222 Query: 224 FWKTIDPNDSLIRFPKEKDS-RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--Y 280 W ++ + + D+ C +++ +D + + L +SF + Sbjct: 223 -WVELEKDG--VYPTAGADALVCENPSSVQTCETVDKVLYRGSNVVSLKADSFVYASEKF 279 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 D K G LSDH PI +++ + Sbjct: 280 TNTDPKYLGDILSDHNPILVNFTW 303 >gi|160885982|ref|ZP_02066985.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] gi|156108795|gb|EDO10540.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] Length = 366 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 97/321 (30%), Gaps = 94/321 (29%) Query: 13 LVPCTASVAQKVRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +V A + + ++N++ + E G S + + Y +NL ADI+ Sbjct: 99 MVKMNAYTPGILTVATYNVDAFNHEHTGYSCKE------------IASYMRNLQADILCF 146 Query: 72 QE--------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 QE + S AV + + I S K + + ++++N+ V Sbjct: 147 QEFGINDEFGVDSIAAV--LSDWPYYYIPIS-----PEGKHLLQLAVFSRYPIKEENLIV 199 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLD 171 YP + +E N + I + + HL++ D Sbjct: 200 ----YPDSKNCSLWCD----------IETNARTIRLFNNHLQTTEVSQNKRKLEKGLHTD 245 Query: 172 SLENTYSPSC----------SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINY 217 + + + QA LK I S P +I GDFN + + Sbjct: 246 DSQRVERAALGLIDGLHENFRKRAVQANTLKQLI---AASPYPTIICGDFNSLPSSYVYH 302 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + + K ++ + IDY L + Sbjct: 303 TVKGDKLQDGFQTSGHGYMYT---------FKFFKHLLRIDYI---------LHSPELNS 344 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 Y D+ SDH P+ Sbjct: 345 TDYFSPDLTY-----SDHNPV 360 >gi|116072855|ref|ZP_01470120.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] gi|116064381|gb|EAU70142.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] Length = 282 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 92/313 (29%), Gaps = 81/313 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N + R + L + D++ LQE + + Sbjct: 1 MRIATWNVN------------SVRSRLDQVLSWL----EQAQPDLLCLQETKVDDPLFPS 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 K F W + + ++ N R +D+ + ++ L K Sbjct: 45 KAFEAKGWRVNFHGQKSYNGVALVSRAPLDDVRYGFV---GELEKDPEALDLGEQKRV-- 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + I+G ++ L + S D + + LK ++ Sbjct: 100 ---------ISALIDGVRVVNLYVPNGSSLTSDKYPYKLTW--------LKCLKRYLEHP 142 Query: 199 KESLVPFVIAGDFNRKINYLGNN--DDFWKTIDPNDSLIRFPKEKDSR------------ 244 + P + GDFN + + D I +D+ + + + Sbjct: 143 LKRGEPLCVVGDFNIALEARDMHAPDRLSGGIMASDAERQALQMALANGLQDVFRVFEPD 202 Query: 245 CNANKNLRNKI---------PIDYFVMDQN----AYKFLIQESFSEILYNEDDIKSRGKR 291 + ID+ + A +I +S + Sbjct: 203 AGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVR-----------GNDK 251 Query: 292 LSDHCPISIDYDF 304 SDH P+S+D D+ Sbjct: 252 PSDHAPVSVDLDW 264 >gi|330953940|gb|EGH54200.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 261 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 88/254 (34%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + +V + + S + + D Sbjct: 43 LREAVRTVSADIVFLQEVHGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 103 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 152 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 153 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRQRAD---ASLQG 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 199 SGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 247 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 248 HLSDHAPLAVELTL 261 >gi|289663812|ref|ZP_06485393.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 1195 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHM--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + S + + + I V+ Sbjct: 635 DILGTVEVENISVLQALAARVNADAVASGQSNPQYVAYLQEGNDVGGIDVGFLVKTADIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGK-----KIWVLDIHLK 165 RV S G +++ +R + L ++ + + +H + Sbjct: 695 GGVPRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|257457683|ref|ZP_05622850.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] gi|257445069|gb|EEV20145.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] Length = 350 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 99/302 (32%), Gaps = 53/302 (17%) Query: 20 VAQKVRLVSWNINTL--SEQEGVSLWK---NSVKRTTSDY---------------TLLRQ 59 + V LV++N T + ++G + + + T Y L Sbjct: 34 FKEPVTLVTYNTQTFFDAVEDGTEFKEYKGSKSQWTEQKYRTRLERLKHTVFAAGEKLTG 93 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 L DIV LQE+ + +V ++ S E ++ T + Sbjct: 94 KKDRL-PDIVVLQEIEND----RVV-EDFCKQLPSKENYPYAVCPPASKSAFTTV----- 142 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----IWVLDIHLKSFCFLDSLEN 175 + + + + R E ++ K + V +H KS + Sbjct: 143 ILSKYPVEQFFVHRLYTDQKISLRPLTEAVLNTGSKDKPQLLTVFAVHWKS-----KTGS 197 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + S + L Q+AQ ++ ++++ PFV+ GDFN+ + DD D D Sbjct: 198 SDSAAVRAL-QEAQLMQKIREHREKNPQIPFVVCGDFNQTLEEFNQLDDLAVCWDGADYR 256 Query: 235 IRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + K ID+ + A ++F Y D + + Sbjct: 257 TESEEGI----QPDGSYYFKGSWEKIDHIFYESGADGSGDSDAF----YTGDAGAAYIEP 308 Query: 292 LS 293 LS Sbjct: 309 LS 310 >gi|325919446|ref|ZP_08181471.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] gi|325550066|gb|EGD20895.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] Length = 1110 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 40/232 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNLDADI 68 P A V + ++N+ + + V T + + L DI Sbjct: 493 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNSLHTPDI 551 Query: 69 VFLQEMGSYNAVAKVF------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + E+ + + + + P + + + D + T AV Sbjct: 552 LGTVEVENISVLQTLAARINADAVAGGQPDPHYVAYLQEGNDVG--GIDVGFLVKTG-AV 608 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGKKIWVL-----DIHL 164 RV S G +++ +R + L +++ VL +H Sbjct: 609 SAGVPRVEVVSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTAKVHQADGRVLPLTAIVVHQ 668 Query: 165 KS--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 +S D T + QA++L + +++ ++ GDFN Sbjct: 669 RSLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLDPAEQVLVMGDFN 718 >gi|325982581|ref|YP_004294983.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] gi|325532100|gb|ADZ26821.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] Length = 261 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 90/309 (29%), Gaps = 86/309 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L +WN+N+L R L + D++ LQE+ K+ Sbjct: 3 MKLATWNVNSL------------KVRLPQVIDWLVAH----QPDVLCLQEI-------KL 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 +N + + + + + +A+ K+ + + P L + A Sbjct: 40 INEN---FPINEIKAAGYESVFAGQKTYNGVAILSKRQGSNIVTAIPGLADEQKRVIAAT 96 Query: 143 RRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + ++ NG+ + E C W+ Q+ Sbjct: 97 YGDLRVICAYVPNGENV--------------ESEKYEYKLCW-----LPAFTQWLKQELI 137 Query: 201 SLVPFVIAGDFNRKINYLGNND-DFWK-----------------TIDPNDSLIRFPKEKD 242 + GDFN D + WK + DS F + + Sbjct: 138 DYKRLAVLGDFNIAPEDRDVYDAELWKGKVLCSEPERSAFGNMLNLGLADSFRLFEQPEK 197 Query: 243 SRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S ++ ID+ ++ + + + D + +R S Sbjct: 198 SYTW----WDYRMLAFRRNQGLRIDHILLSEELCNACVTCAI-------DKTMRKLERPS 246 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 247 DHAPVLVEL 255 >gi|153833025|ref|ZP_01985692.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148870746|gb|EDL69652.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 317 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 93/301 (30%), Gaps = 30/301 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---RQYAKNLDADIVFLQEMGSYNAV 80 + + N+ G ++ L + L+ DI+ LQE+ S N Sbjct: 7 ITFTTANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSINET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137 F + + F + + + A+A R V L D Sbjct: 67 QTFFAEIGYQYFACVDT-PHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDS--LENTYSPSCSLLSQQ-----AQ 189 + +R+ V + I V HLKS DS E P LS Q A Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185 Query: 190 WLKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L+D + + + +P ++ GD N+ I N+ + + + +R + + + Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITQTSVNNVLVEQYGDSVTDLRLCDGWELQVAPS 245 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 R +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305 Query: 295 H 295 H Sbjct: 306 H 306 >gi|325922786|ref|ZP_08184516.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546728|gb|EGD17852.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 305 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 76/260 (29%), Gaps = 44/260 (16%) Query: 48 KRTTSDYTLLRQYAKN----LDADIVFLQEM--------GSYNAVAKVFPKNTWCIFYST 95 D+ R Y L D++ LQE+ +A+ F S Sbjct: 61 HHDREDWPARRAYIAKQLKQLAPDVIALQEVIERRGSVENQAAWLARKLGYEY--TFASV 118 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + A R N + +++ + + R A L V+++G+ Sbjct: 119 DP--------------VGAAKRYGNALLSRRNVLAMHQRLLQPLDDYRVAAHLQVDVDGQ 164 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + V HL + + + +Q L D+I P VIAGDFN Sbjct: 165 PVNVYVTHL------NERADARGTATRT--RQVADLLDFIAS-NSDQAPVVIAGDFN-TA 214 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + K + + + ID+ QN Sbjct: 215 ADALDLEALRKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARIL 274 Query: 276 SEILYNEDDIKSRGKRLSDH 295 + Y + G+ SDH Sbjct: 275 FDAPY------AEGRWASDH 288 >gi|78212211|ref|YP_380990.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] gi|78196670|gb|ABB34435.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] Length = 288 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 99/327 (30%), Gaps = 87/327 (26%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + V++ +WN+N RT D + + D++ LQ Sbjct: 1 MLRVFDATESTVQIATWNVN--------------SVRTRLD--QVLSWLDREQPDLLCLQ 44 Query: 73 E--MGSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQS 127 E + + F W + ++ N R+ D+ Sbjct: 45 ETKVDDSLFPVEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFV----GELPDDAE 100 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLL 184 LGA+ A + VL++++ + L S + Y + C Sbjct: 101 ADDLGAQKRVISALLSG------------VRVLNLYVPNGSSLKSEKYPYKLTWLGC--- 145 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEK- 241 LK ++ +++ P + GDFN + D +T I +D+ + ++ Sbjct: 146 ------LKRYLDAQQQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDAL 199 Query: 242 -----------DSRCNANKNLRNKI---------PIDYFVMDQN----AYKFLIQESFSE 277 + + ID+ + A +I + Sbjct: 200 GDRLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKGMR- 258 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ SDH P+S+D D+ Sbjct: 259 ----------GNQQPSDHAPVSVDLDW 275 >gi|212633735|ref|YP_002310260.1| endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3] gi|212555219|gb|ACJ27673.1| Endonuclease/exonuclease/phosphatase [Shewanella piezotolerans WP3] Length = 361 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 93/310 (30%), Gaps = 74/310 (23%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L + DI+ QE+ S +A+ A+ + + + + RD I + Sbjct: 50 LANFLAENQPDIIGFQEVFSADALANQAREAGLEHFAVVDEPTIVDDFICRDPVVAIASK 109 Query: 114 IA---VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCF 169 A V+ +V L +SR R V L + + +HLKS Sbjct: 110 FAFEDVQAVDVDSDYAKALGLEESFKYSRKPLRVTVVL---PDIGHCDIYVVHLKSKRAS 166 Query: 170 LDSLENTYSPSCSLLSQQAQW----------LKDW-----------------ITQKKESL 202 LD L S + + L W + ++ E+ Sbjct: 167 LDELPPAQSM---TVKHSGKANFGELLGRNVLGQWASGIQRGTEAALLFHTMMLRRIETQ 223 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTID------------PNDSLIRFPKEKDSRCNA--- 247 ++ GDFN +++ + + + P + ++++ NA Sbjct: 224 NAMILLGDFNDSLSHQPLSLLLAQELRFEREGSGELASYPLSDSYQLYYQREAEVNAENI 283 Query: 248 ----------NKNLRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSR 288 +DY ++ Q+ + Y+ +D +R Sbjct: 284 SDENSMPSQRQATHYYGAQGNVLDYILLSQDFNPHFHTSTAEVTDYHTEDRHLINPQYAR 343 Query: 289 GKRLSDHCPI 298 +DH P+ Sbjct: 344 DSHSTDHAPV 353 >gi|241765066|ref|ZP_04763058.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] gi|241365303|gb|EER60125.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] Length = 258 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 91/306 (29%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 ++L +WNIN+LS L Q L A D + LQE Sbjct: 1 MQLATWNINSLS-------------------VRLPQVVAWLAANPVDALCLQE------- 34 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + + + +A+ ++ + G D +R Sbjct: 35 ---LKLTDDKFPFAALQEAGYHAVAMGQKTYNGVAILSRSPLRDVVRN-IPGHDDQQARV 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + ++ + +++ C+ + + S + + Q L DW+ + Sbjct: 91 -----IAATMDTATGPVRLVN------CYFVNGQEPGSEKFAYKMRWLQALHDWLRTELA 139 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKD 242 + + GDFN I++ ++ + D+ F + + Sbjct: 140 AHPRLALLGDFNVAPEDRDSYDPVGLRETIHHTTEERAHFQALLALGLTDAYRMFEQPEK 199 Query: 243 SRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ ++ + + + D + + SDH P Sbjct: 200 AYSWWDYRMLGFQKNRGLRIDHILVSEALRGTVKACTI-------DRAPRKNPQPSDHAP 252 Query: 298 ISIDYD 303 + D Sbjct: 253 VVATLD 258 >gi|225077187|ref|ZP_03720386.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] gi|224951478|gb|EEG32687.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] Length = 256 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 91/303 (30%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLNVR----------------LPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAI-----ISRHEPQDVHCGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + Sbjct: 90 RVIAATI----NGVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAVHP 139 Query: 204 PFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + + + W + L ++ Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKTLLDLGLTDSLRKVHPEGAFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + L + D +R SDH P+ Sbjct: 200 WFDYRGAMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVIA 252 Query: 301 DYD 303 ++D Sbjct: 253 EFD 255 >gi|161524628|ref|YP_001579640.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189350616|ref|YP_001946244.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|160342057|gb|ABX15143.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189334638|dbj|BAG43708.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] Length = 285 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 81/212 (38%), Gaps = 39/212 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------- 73 +R++ WNI + +G ++RT + L + D++ +QE Sbjct: 1 MRMIDWNIQWGRDADGAV----DLRRTIAAARQLADF------DVLCVQEITRGFDALPG 50 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + + +A + P + + + + ++ + AIA R RVL+Q P Sbjct: 51 HPGVDQFAELAALLPG--YTVVEAIGADLPSAQPGAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCSL 183 D+ + + R A+++ + + V+ HL + +D++ + +C+ Sbjct: 109 WPA--DADAPSMPRVALDVELLTASGPLRVVTTHLEFYSERQRLAQVDAIRARHREACAH 166 Query: 184 LSQQAQWLKD---WITQKKESLVPFVIAGDFN 212 + A D ++ ++ GDFN Sbjct: 167 ADRPAPAENDTGPFVAT--AQSRDAILCGDFN 196 >gi|306843285|ref|ZP_07475893.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] gi|306286516|gb|EFM58102.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] Length = 369 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 112/368 (30%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQY-------------- 60 + ++N+ L + S ++N + RT + Y LL Q Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 61 --AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAETRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVE----------------------LLVEINGKK 156 ++ Q + + + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGLYQLELAELGIEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + + + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGLDGRASSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|153808554|ref|ZP_01961222.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185] gi|149128876|gb|EDM20093.1| hypothetical protein BACCAC_02849 [Bacteroides caccae ATCC 43185] Length = 365 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 111/360 (30%), Gaps = 79/360 (21%) Query: 3 RKYVLALVFFLVPCTASVAQKVR--LVSWNINTL------SEQEGVSLWKNSVK-----R 49 R + + F + CT S AQ++R +VSWN+ L S + ++++ R Sbjct: 24 RAAMAIIFFVMGFCTLSFAQQIRFRVVSWNVENLFDIHHDSLKNDREFLPDALRHWNYTR 83 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLIN 100 T + + + +V L E+ + + + + + + + Sbjct: 84 YKKKLTDMARVITAVGEWEPPALVGLCEVENDTVLRDLTRRSPLKELNYRYVMTDSPDLR 143 Query: 101 HSKRD--SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 D+ ++ R ++ L+Q P + + G + Sbjct: 144 GIDVALLYQRDLFKLLSFRSVSIPPLKQFRPTRDLLHVSG-----------LLLTGDTLD 192 Query: 159 VLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQ-WLKDWITQKKESLVPFVIAGDFNRKIN 216 V HL S Y + +L +A L +I GDFN Sbjct: 193 VFVCHLPSRSGGAKESEPYRLHAARILYTEADSILN------IRLHPQIIIMGDFN---- 242 Query: 217 YLGNNDDFWKTIDPNDSLIRFP-----------KEKDSRCNANKNLRNKIPIDYFVMDQN 265 N K ++ P K + + K +D+ ++ + Sbjct: 243 DYPTNKSIQKILEAESPSPTAPSPLKLYHLLARKAQSKNFGSYKYRGEWGLLDHLIVSGS 302 Query: 266 ----AYKFLIQES---FSEILYNEDDIKSRGKR--------------LSDHCPISIDYDF 304 A F E+ S + + + K G + +SDH PI +D++ Sbjct: 303 LLNPANSFSTSENKATVSNLPFLLTEDKKYGDKEPFRTYKGMKYQGGISDHLPIYVDFNL 362 >gi|289671150|ref|ZP_06492225.1| putative secreted protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 801 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 72/231 (31%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 184 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHM--P 240 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + S ++ + + I V+ Sbjct: 241 DILGTVEVENLSVLQTLAARVNADAVSSGQQDPKYVAYLQEGNDVGGIDVGFLVKTADTA 300 Query: 119 -KNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGK-----KIWVLDIHLK 165 RV S G +++ +R + L ++ + + +H + Sbjct: 301 GGVPRVDVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQVDGRTLPLTAIVVHQR 360 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 361 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 409 >gi|322420097|ref|YP_004199320.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320126484|gb|ADW14044.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 246 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 81/259 (31%), Gaps = 49/259 (18%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + +ADIV LQE+ I + E + + A Sbjct: 26 RIAEVIDRCNADIVALQELD-AGLPRTQMTDQAHLIALTLEMSFHFHSSIHMMEGGYGNA 84 Query: 116 V-RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V + +VR+++ R AV + VE+ G KI VL H F + Sbjct: 85 VLSRGDVRLIKAGAIPADPLH--PSFERRGAVWVEVELGGHKIQVLATH-----FGLNRG 137 Query: 175 NTYSPSCSLLSQQAQWLK--DWITQKKESLVPFVIAGDFN-------RKINYLGNNDDFW 225 S QA+ + +W+ + E P ++ GDFN ++ +D Sbjct: 138 ERVS--------QARAVTGHEWL-EHPECRHPAILCGDFNATAGSYVYRLLTRHMHD--- 185 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 R P+ + + ID+ + ++ + + + Sbjct: 186 ---VQRGLKGRLPRGT----WPAQFPFMR--IDHLLASRDLKVRSVSVPRTPLTRVA--- 233 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH P+ + Sbjct: 234 -------SDHLPLVATLEL 245 >gi|228469461|ref|ZP_04054469.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] gi|228309036|gb|EEK17679.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] Length = 392 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 92/274 (33%), Gaps = 64/274 (23%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D Y DADI+ LQE ++ K+ + S L + + Sbjct: 150 DQHATTDYLAKSDADIICLQE----AWLSS--NKSKY---MSERSLRHTLSNYPYYS--S 198 Query: 113 AIAVRKKNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A AV+ R++ S YP+L + + + + KK+ + ++HL+SF F Sbjct: 199 AYAVKDHGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLVLYNLHLESFGFTR 258 Query: 172 SLE--------------------NTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGD 210 + +SP+ +QQ + + I ++ P+ ++ GD Sbjct: 259 EEQAHYFQLAQEVNPKGFTQAVGGRFSPAFKRRAQQVEQIYQDINYQES---PYLLVCGD 315 Query: 211 FN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQN 265 FN I+Y + + + + N + K ID+ + Sbjct: 316 FNDTPISYTHHR------LSAGLHDAIATTGRGT----NYSYYFKSLIGVRIDHMLYSDQ 365 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ++ + R +SDH PI Sbjct: 366 ----IVARAAHV---------DRSVNISDHKPII 386 >gi|294508891|ref|YP_003572950.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294345220|emb|CBH25998.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 317 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 50/201 (24%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQY--------------AKNLDADIVFLQEMGSYNA 79 L + + +R D + Y + +D D+V LQE+ S Sbjct: 24 LGTTGAWAQETPAPQRDRPDSLTVMTYNVLYATPDTGTVRAIEAVDPDVVALQEI-SEPR 82 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + + +S E N T + R R Sbjct: 83 LRHIADELDYYFHHSDEHEANEED--------TGLLSRYPISR----------------- 117 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--------SPSCSLLSQQAQWL 191 R L + ++ I + ++HL + + + + S + + + Sbjct: 118 -PTRYGALLYLTVDD-PIRIANVHLSPYPYEPYALRDDEMTPQEAVAQARKTRSPEIKPV 175 Query: 192 KDWITQKKESLVPFVIAGDFN 212 D + + + VP + GDFN Sbjct: 176 LDALAKSVQEDVPTFLMGDFN 196 >gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|212550735|ref|YP_002309052.1| hypothetical protein CFPG_378 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548973|dbj|BAG83641.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 343 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 70/276 (25%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N ++DI+ QE ++ N + + + A+ Sbjct: 110 DSILQYVANQNSDIICFQEF-------RL--GNKQLTLSAVRNTLRATPYFFLLPCRVAV 160 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + YP+L K+ + A+ + ING+K+ +++ HL+S LDS + Sbjct: 161 FSK----------YPILSTKNIPFGSRYNGALIAELNINGRKVTLINCHLESNKILDSEK 210 Query: 175 NTYSPSCSLLS-----------------------QQAQWLKDWITQKKESLVPFVIAGDF 211 Y L+ Q+ + + I ++ +I GDF Sbjct: 211 IDYYDLIQTLNVRKLGAFTYMMFHKLTPAFKIRAMQSSIIAEII--RESKNPYTIICGDF 268 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYK 268 N ++ I + +S C + IDY +N Sbjct: 269 N-----DTPISFTYRKIKGD----LEDSFVESGCGMGISFNANYFLFRIDYIFHSKNMR- 318 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 S++ ++ +D SDH P+ F Sbjct: 319 -----SYNAMVGKGED--------SDHYPVQTYLQF 341 >gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|182417077|ref|ZP_02948455.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237667663|ref|ZP_04527647.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379086|gb|EDT76590.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237656011|gb|EEP53567.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 107/298 (35%), Gaps = 58/298 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 ++++++N L + + R Y ++ +Y DI+ QE Y + Sbjct: 1 MKVMTFN---LRCDFPLDINNRWKNRRHITYNIIDKY----KCDIIGTQEATENMYKDIK 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K + + I + +R+ I ++ +N + +++ L D+ + Sbjct: 54 K--NSDNYNIIGTPRSRKFFVERND-------ILIKNENKIIESKTFWLSDTPDTVGSSK 104 Query: 142 -----NRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R ++E++ K KI V + HL CF L + + ++ Sbjct: 105 WFSVFPRICTTAVIELSNKVKIRVCNSHLD--CFTSKAREYE------LKRLMELIE--- 153 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKN-- 250 ++ + +P +I GDFN G + K + + +E D R N Sbjct: 154 EEQIKEDLPIIIMGDFN-----SGPDSKLIKNLSSGVYGSKKVSAVQEYDKRLYMNSTMS 208 Query: 251 -LRNKI---PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K IDY + + + + YNE+ GK SDH P+ + + Sbjct: 209 MFKGKEKGLHIDYIFVSEEFKV----NNVEIVRYNEN-----GKYPSDHYPLMAEIEL 257 >gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] Length = 788 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNYFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|223634725|sp|Q5XJA0|TYDP2_DANRE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog gi|133777713|gb|AAI15077.1| Ttrap protein [Danio rerio] Length = 369 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 95/280 (33%), Gaps = 48/280 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++SWN++ L +L R L Y D+VFLQE Sbjct: 122 KLSIISWNVDGL-----DTLNLADRARG------LCSYLALYTPDVVFLQE--------- 161 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + + S++ T I +RK V+ L+ Sbjct: 162 LIPA--YVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTTQM-----M 214 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +G+K++++ HL+S C S E T +Q + + I + Sbjct: 215 RNLLIAQVTFSGQKLYLMTSHLES-CKNQSQERT---------KQLRVVLQKIKE-APED 263 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + AGD N + + N W+ + + R+ + + N ++ Sbjct: 264 AIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHC-RYTWDTKANSNKTVPYVSRC 322 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + K + + + G+ SDH Sbjct: 323 RFDRIFL--RSAKTAPPVTPDHMALIGMEKLDCGRYTSDH 360 >gi|94733763|emb|CAK05424.1| traf and tnf receptor associated protein, like [Danio rerio] Length = 383 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 95/280 (33%), Gaps = 48/280 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++SWN++ L +L R L Y D+VFLQE Sbjct: 136 KLSIISWNVDGL-----DTLNLADRARG------LCSYLALYTPDVVFLQE--------- 175 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + + S++ T I +RK V+ L+ Sbjct: 176 LIPA--YVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTTQM-----M 228 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +G+K++++ HL+S C S E T +Q + + I + Sbjct: 229 RNLLIAQVTFSGQKLYLMTSHLES-CKNQSQERT---------KQLRVVLQKIKE-APED 277 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + AGD N + + N W+ + + R+ + + N ++ Sbjct: 278 AIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHC-RYTWDTKANSNKTVPYVSRC 336 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + K + + + G+ SDH Sbjct: 337 RFDRIFL--RSAKTAPPVTPDHMALIGMEKLDCGRYTSDH 374 >gi|78185266|ref|YP_377701.1| exodeoxyribonuclease III xth [Synechococcus sp. CC9902] gi|78169560|gb|ABB26657.1| Exodeoxyribonuclease III [Synechococcus sp. CC9902] Length = 282 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 91/314 (28%), Gaps = 83/314 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N + R + L + D++ LQE + Sbjct: 1 MRIATWNVN------------SVRSRLDQVLSWL----EQAQPDLLCLQETKVDDPLFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F W + + ++ N R +D+ + +++ L K Sbjct: 45 QAFEAKGWRVHFHGQKSYNGVALVSRAPLDDVRCGFV---GELDKDPEAFELGEQKRV-- 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQ 197 + I+G ++ L + S D C LK ++ Q Sbjct: 100 ---------ISALIDGVRVVNLYVPNGSSLTSDKYPYKLKWLRC---------LKRYLEQ 141 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEK--------DS 243 + P + GDFN + +D + ++L + + Sbjct: 142 PLQRGEPLCVVGDFNIALEARDMHDPDRLSGGIMASDPEREALQMALESGLQDVFRVFEP 201 Query: 244 RCNANKNLRNK---------IPIDYFVMDQN----AYKFLIQESFSEILYNEDDIKSRGK 290 + ID+ + A +I + + Sbjct: 202 DGGHWSWWDYRTGAWDRDRGWRIDHIYLCDELLGLARSCVIHKQVR-----------GNE 250 Query: 291 RLSDHCPISIDYDF 304 + SDH P+S+D D+ Sbjct: 251 KPSDHAPVSVDLDW 264 >gi|126728921|ref|ZP_01744736.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] gi|126710851|gb|EBA09902.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] Length = 333 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 99/339 (29%), Gaps = 66/339 (19%) Query: 24 VRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R ++N+ L +G S ++ +R + L K LDAD V + E Sbjct: 1 MRFATYNVEWFDALFDDRGHLIADDGWSGRRDVTRRAQA--EALGTVFKVLDADAVMVIE 58 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-------IAVRKKNVRV 123 GS + + + + + ++ A + VR Sbjct: 59 APDTGSRRSTTRAL--TAFAQAFDLRTSATITGFTNDTQQEIALLYDPARLTVRHDPKAT 116 Query: 124 -----------LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + FS+ AV +G + ++ HLKS + Sbjct: 117 PGAPGFDTEFRIDLDVDDFPDPVRFSKPPLELAVT---TASGHAVHLIGAHLKSKAPHGA 173 Query: 173 LENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNND 222 ++ ++ QA WL+ I ++ GD N + L Sbjct: 174 RSRDDVMRLAIANRRKQLAQAIWLRARIDALLADGQSLIVMGDLNDGPGLDEFESLFGRS 233 Query: 223 DFWKTIDPNDSLIRFPK-----EKDSRCNANKNLRNKIP--------IDYFVMDQ----N 265 + D+ + P + + P +DY ++ Sbjct: 234 SVEIVLGQGDTALYDPHAAEALSRRIGAQPATSRFFIEPENRYLQALLDYVMVSPDLMAR 293 Query: 266 AYKFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYD 303 + I F + + ++ SDH P+++D + Sbjct: 294 QPDWRIWHPFDNPRCWRDPALREALLTASDHFPVTLDLE 332 >gi|227532810|ref|ZP_03962859.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630649|ref|ZP_04673680.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|227189551|gb|EEI69618.1| endonuclease/exonuclease/phosphatase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526932|gb|EEQ65933.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 355 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 96/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNL---DADIVFL 71 Q +++NI S S + + K + + Y+ + K + D+ F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSKKSVRTSINGVIKTTQAQNPDVAFY 110 Query: 72 QEMGSYNAVA------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ + K+ + + + A + Sbjct: 111 QEIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I Q + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + ID +++ N + Sbjct: 281 SKLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|319953162|ref|YP_004164429.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319421822|gb|ADV48931.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 325 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 96/326 (29%), Gaps = 65/326 (19%) Query: 25 RLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLDAD------ 67 + +N+ L + E ++ +R S L + D Sbjct: 17 TVAFYNLENLFDTEDNPDKLDTDYTPNGKLKWTPERYHSKLFKLASTISKIGFDAIGKAP 76 Query: 68 -IVFLQEMGSYNAVAK-----VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ + E+ + + V N + H I A+ K+ Sbjct: 77 VLIGVVEVENKKVLKDLLAEPVLASNAYDFI--------HYDSPDERGIDNALIFDKRFF 128 Query: 122 RVLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLDIHLKSFC-FLDSLENTYSP 179 +V+ L + + R + + ++N +++ + H S D E Sbjct: 129 QVIHSEAIPLKVFNLDGQQDMTRDILYVHGKLNEEEVHIFVNHWPSRRDGGDETEYKRIK 188 Query: 180 SCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + + L+ ++ P +++ GDFN G K + +L Sbjct: 189 AAATIINFMKVLE------EKYSEPNYIVMGDFN-----DGPQTASVKKLVGEKNLFNPM 237 Query: 239 KEKDSRCNANKNLRNK-IPIDYFVMDQNAYKF-LIQESFSE------------------I 278 ++ + + N + K D ++ + F SF+ Sbjct: 238 EKLLTPKRGSANYKFKWSLFDQILISHSFLNFEKKTHSFNSSNIFDDHFLTEFKGKFKGS 297 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ I F Sbjct: 298 PFRTYVGRRYMGGYSDHFPVYIHLKF 323 >gi|332286021|ref|YP_004417932.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7] gi|330429974|gb|AEC21308.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7] Length = 284 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 34/157 (21%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVR--K 118 L D++FLQE+ +N + T H + ++H A A+R Sbjct: 34 LHPDLLFLQEVQ---------GRNDQRLSLDT----QHEFLAAALNMHAAYGCNAIRPHT 80 Query: 119 KNVRVLQQSYPLLGAKDSFS---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + L YP+L ++ R R + L+E+ G + L +HL F Sbjct: 81 DHGNALLSRYPILEHENQDISDHRLEQRGLLHALIEVQGVSVHCLVVHL--GLFAGGRS- 137 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q L + I + P +IAGDFN Sbjct: 138 ----------RQVAALVERIKRMVPEGEPMLIAGDFN 164 >gi|127513098|ref|YP_001094295.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126638393|gb|ABO24036.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 945 Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 107/340 (31%), Gaps = 67/340 (19%) Query: 16 CTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDADIV 69 + +++ S+N +N + G + T S++ R + +DADI Sbjct: 456 PALAAGGNLKVASFNVLNYFNGDGLGGGFPTDRGADTPSEFARQRAKIISAMVSIDADIF 515 Query: 70 FLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 L E+ + + + + + + + I + I + R Sbjct: 516 GLMEIENDGFGTESAINDLVSGLNQAVGEARYQFISAPTPTIGT------DAITVGMLYR 569 Query: 118 K------KNVRVLQQSYPLLGAK------DSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 +VL + L + D +R +A E+LVE +++ V HLK Sbjct: 570 SDRVRPVGAAKVLSSANSPLDEQGEVLFNDGKNRPSLTQAFEVLVE--DQQLVVAVNHLK 627 Query: 166 SF---CF--LDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 S C D N +C+ ++ A L W+ + +P ++ GD N Sbjct: 628 SKGSDCVSLGDPDLNDGQGNCNLTRTRAATALGAWLAS-EYGELPTLVIGDMN----AYA 682 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 D + L F S + +D+ + + ++ + I Sbjct: 683 KEDPI-DALRGAGYLELFDHLGKSGAYSYVFSGETGQLDHALANTQLADRVVDVTEWHIN 741 Query: 280 YNEDDIKSR-----------------GKRLSDHCPISIDY 302 +E + R SDH P+ I Sbjct: 742 TDEPRLLDYNEEFKSAGQIESLYSSDAYRSSDHDPVVISL 781 >gi|325479466|gb|EGC82562.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 349 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 115/319 (36%), Gaps = 70/319 (21%) Query: 25 RLVSWNINT--------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++++WNI G + S + + + Q K+++AD +QE+ Sbjct: 57 KIMTWNIGYGGLDKDTDFFMDGGKMVLPISKEHVENALDGILQSIKDINADFNLIQEIDE 116 Query: 77 ---------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 N + + + Y + K +S T + K Sbjct: 117 DSKRTYNINEVEMFRENLLGNSIFAYNYKVKYVPYPIPPMGKMNSGILTQTKFKISK--A 174 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYS 178 QQ P K A +R ++ +E KK+ ++++HL D+ EN + Sbjct: 175 FRYQQPIP---HKFPTRLANLKRGFDVSYLDIESTDKKLALINVHL------DAYENGNN 225 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI--NYLGNN-DDFW------KTID 229 + Q + + ++I + + ++ GDFN+++ NY ++W I Sbjct: 226 GRIA----QIKQIFEFIQNEYDMGNYVIVGGDFNQELRENYKAERISEYWNPSDFPHEIF 281 Query: 230 PND-SLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDI 285 PND L+ SR N N ID F++ +N +D+ Sbjct: 282 PNDFKLVYGDNVNSSRLNNTPYNPNDSYECIIDGFIVSKNI--------------EVEDV 327 Query: 286 KSR--GKRLSDHCPISIDY 302 K G + SDH P+++ + Sbjct: 328 KVEDLGFKNSDHNPVTMKF 346 >gi|302566051|pdb|3I5V|A Chain A, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566052|pdb|3I5V|B Chain B, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566053|pdb|3I5V|C Chain C, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus gi|302566054|pdb|3I5V|D Chain D, Crystal Structure Of Beta Toxin 275-280 From Staphylococcus Aureus Length = 313 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 97/293 (33%), Gaps = 32/293 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVS N+ LS L+ N + +D Y K + D+V E A K+ Sbjct: 30 LKLVSHNVYMLST----VLYPNWGQYKRADLIGQSSYIK--NNDVVIFNEAFDNGASDKL 83 Query: 84 FPKNTWCIFYST----------ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 Y T ++ D AI + +Q + Sbjct: 84 LSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCG 143 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D+ S G V +E NGK + V+ H +S DS + ++Q + + D Sbjct: 144 FDNDSNKGF---VYTKIEKNGKNVHVIGTHTQS---EDSRCGAGHDR-KIRAEQMKEISD 196 Query: 194 WITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 ++ +K I GD N D K ++ ND L + + Sbjct: 197 FVKKKNIPKDETVYIGGDLNVNKGTPEFKD-MLKNLNVNDVLYAGHNSTWDPQSNSIAKY 255 Query: 253 N-----KIPIDYFVMDQNAY--KFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N +DY D++ K L+ E +E D SDH PI Sbjct: 256 NYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVDGYVYNDFSDHYPI 308 >gi|300115398|ref|YP_003761973.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] gi|299541335|gb|ADJ29652.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] Length = 254 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ +WN+N+L + ++ + + + D + LQE N Sbjct: 1 MKIATWNVNSLRVR----------------FSQVVDWLEIHQPDALALQETKLVDENFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + YS ++ + +A+ Q+ +L + + Sbjct: 45 EAFKDIGYHAVYSGQKT------------YNGVAI-----LCRQEPKDILTDLPNLVDSQ 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ + I VL++++ + + S + Y WL +E+ Sbjct: 88 RR-----ILGVTLDDIHVLNLYVPNGSEVGSEKYAYK---------LDWLGRIKDYLQEA 133 Query: 202 LVPF---VIAGDFNRKINYLGNNDD-FWKT-----------------IDPNDSLIRFPKE 240 LV + ++ GDFN D W + DS F ++ Sbjct: 134 LVEYPKLIVLGDFNVAPADQDVYDPEVWHETILCSTPEREALQEILALGFQDSFRLFEQQ 193 Query: 241 KDSRCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 S RN+ ID ++ + + D R R SDH Sbjct: 194 AQSFSWWDYRGGAFHRNRGLRIDLILISKALVSKC-------MGCVIDKEPRRLPRPSDH 246 Query: 296 CPISIDY 302 P+ + Sbjct: 247 APVIATF 253 >gi|315223415|ref|ZP_07865272.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] gi|314946588|gb|EFS98579.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] Length = 266 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 99/298 (33%), Gaps = 67/298 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+ K ++T+ T +++ ++ADI+ L E + ++ +++ Sbjct: 16 KIATWNVE---------RPKKGTEKTSLAITKIKE----VNADILVLTENATSISLTELY 62 Query: 85 ------------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 P+ W +S ++ K + ++ TA AV K + + Sbjct: 63 SFSVHSLAYERTPEEHWVSIFSKWQITQQIK--TFDNYRTACAVIK-APFGDIAVFGTII 119 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +G R + + D+H QQA+ Sbjct: 120 PYHQAGVSGVRYG---NLGYKQWEYHEKDLH----------------------QQAK--- 151 Query: 193 DWITQKKESLVPFVIAGDFN---RKINYLGNND--DFWKTIDPNDSLIRFPKEKDSRC-N 246 +W +E+ +P + GDFN + G L + S + Sbjct: 152 NWEDIIEETQIPLWVMGDFNQSRYNLQGYGTEKVRQILTNYLEKLDLSCVTEGDLSPFLH 211 Query: 247 AN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + ID+ + N K + Q D GK +SDH + I +D Sbjct: 212 PDPIKHKIRNNIDHICIANNFIKQMKQYQVG----AWDHFSEEGKYMSDHNGVFISFD 265 >gi|310819623|ref|YP_003951981.1| endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] gi|309392695|gb|ADO70154.1| Endonuclease/exonuclease/phosphatase family protein [Stigmatella aurantiaca DW4/3-1] Length = 569 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 37/216 (17%) Query: 61 AKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + D D+V +QE S +A+ + + R+ I I Sbjct: 78 FQGTDPDVVMIQEFNYGDNSASAIR--------QFVNTAFGSSFYYYREGGAQIPNGIIS 129 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + + P + +D A + K +WV+ +HL + Sbjct: 130 RWPIIASGEWDDPSVDNRD--------FAYARIDVPGPKDLWVVSVHL----LTANASTR 177 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + SL+S+ I + I GDFN F + + + Sbjct: 178 NTEAASLVSR--------IKANIPTGDYLAIGGDFNTDSRSESCFSTFSQVVVTSSP--- 226 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 +P +++ N N P D+ ++D + + Sbjct: 227 YPADRNGNTNTNAA--RAKPYDHVLVDSDLRAYQTA 260 >gi|254702100|ref|ZP_05163928.1| Endonuclease/exonuclease/phosphatase family protein [Brucella suis bv. 5 str. 513] gi|261752670|ref|ZP_05996379.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] gi|261742423|gb|EEY30349.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] Length = 369 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 119/368 (32%), Gaps = 90/368 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVK--RT--------TSDYTLLRQ-----YAKNLD---- 65 + ++N+ L + S ++N + RT + Y LL Q +A + Sbjct: 3 TIATFNVENLMRRFDFSGFRNELHQDRTLQLFEIGDETQYRLLEQARAIAHADDTRQMTA 62 Query: 66 -------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-- 116 ADI+ LQE+ + A+ F + + + D N+ +AV Sbjct: 63 LAIAENRADILCLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMM 120 Query: 117 ----RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKK 156 R + + + P L R R + + + I G+ Sbjct: 121 RDTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEP 180 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 181 LSLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 240 Query: 213 --RKINYLGNNDD-------------FWKTIDPNDSLIRFPKEKDSRCNANKNL------ 251 R+ +G ++ + + + + + Sbjct: 241 DYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLE 300 Query: 252 RNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKRLSDHC 296 R+ +DY + + + I E ++ + SDHC Sbjct: 301 RHLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDHC 360 Query: 297 PISIDYDF 304 P+S+ + Sbjct: 361 PVSVTLNM 368 >gi|115378006|ref|ZP_01465187.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|115364983|gb|EAU64037.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] Length = 587 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 37/216 (17%) Query: 61 AKNLDADIVFLQEMG----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + D D+V +QE S +A+ + + R+ I I Sbjct: 96 FQGTDPDVVMIQEFNYGDNSASAIR--------QFVNTAFGSSFYYYREGGAQIPNGIIS 147 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + + P + +D A + K +WV+ +HL + Sbjct: 148 RWPIIASGEWDDPSVDNRD--------FAYARIDVPGPKDLWVVSVHL----LTANASTR 195 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + SL+S+ I + I GDFN F + + + Sbjct: 196 NTEAASLVSR--------IKANIPTGDYLAIGGDFNTDSRSESCFSTFSQVVVTSSP--- 244 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 +P +++ N N P D+ ++D + + Sbjct: 245 YPADRNGNTNTNAA--RAKPYDHVLVDSDLRAYQTA 278 >gi|82702653|ref|YP_412219.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82410718|gb|ABB74827.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 62/211 (29%), Gaps = 52/211 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ L ++NI + + + ++ADI+ LQE+ + Sbjct: 2 QMTLATYNI-----HGCIGADGRFKP------DRIIDVLQEMNADIIALQEVEHHQV--- 47 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRK----KNVRVLQQSYPLLGAK 134 + + + TAIA VR+ N + + + Sbjct: 48 ----EGYDLL----------DYFAVKTGFTAIAGPTLVRRTHHYGNALLTKLPVLAVNRI 93 Query: 135 DSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D R A+++ + N +++ V+ HL QQ + L Sbjct: 94 DLTLPGREPRGALDVTLAWNDRRVHVVATHL--GLRPSERR-----------QQVRHLLK 140 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + +V+ GD N + Sbjct: 141 LFEIRLT--EIYVLMGDLNEWFLWGRPLRWL 169 >gi|312384628|gb|EFR29312.1| hypothetical protein AND_01852 [Anopheles darlingi] Length = 499 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 18/163 (11%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Y L+ + +N D DI+ LQE+ + + K+ + + + + N+ Sbjct: 178 YQLVEEIIQN-DPDIICLQEVDHFKFLQKILATQNYEGVFFPKPDS-PCLYINGNNGPDG 235 Query: 114 IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCF 169 AV RK + ++ +L S AV L +++ V HLK+ Sbjct: 236 CAVFYRKDRLEMVNHFTRVLEVWRVQSNQVAIAAV-LRTRDTQQELCVTTTHLKARKGAL 294 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L L N +Q + L +I P ++ GDFN Sbjct: 295 LSKLRN----------EQGKDLLHFIDG-IAQNRPVILCGDFN 326 >gi|218264352|ref|ZP_03478209.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] gi|218222083|gb|EEC94733.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] Length = 287 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 97/319 (30%), Gaps = 53/319 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQ----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K +L L L A+ ++ ++S+NI ++ +G + W+ D Sbjct: 1 MKKVLLYLFTLLFSTNVVFAKHLDNEMNVMSFNIRMSTKSDGANWWE-----YRKDLA-- 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAV 116 K D D+ QE+ + + S +V Sbjct: 54 ANVIKFYDVDMFGAQEVLHNQLTDLLDRLPDYGYVGVGREDGKTKGEYSPIFYRKDRFSV 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 K L + +G K + A R A + + + K+ + L+ HL + Sbjct: 114 VKSGNFWLAEDMNAVG-KKGWDAACERVATWAVFKDKESEKEFFFLNTHL-----DHMGQ 167 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 SL+ +Q + L +P ++ GDFN DD K + L Sbjct: 168 IARHEGASLVLEQVKLL--------AGNLPVIVTGDFN-----AVPTDDPIKVLTDEKDL 214 Query: 235 IRFPKEKDSR--CNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + C + + ++ IDY + N + E Sbjct: 215 RHLTHTRTLAPLCYGPEWTFHDYGRVPLDERVWIDYIFIKGNIKV------LRHGVLTES 268 Query: 284 DIKSRGKRLSDHCPISIDY 302 SDHCP+ Sbjct: 269 LGNLYP---SDHCPVISRL 284 >gi|315122848|ref|YP_004063337.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496250|gb|ADR52849.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 265 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 98/303 (32%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 V + +WN+N++ + + + + + DIV LQE + + K Sbjct: 4 VTIATWNVNSIRVR----------------IKNVITWIQENNPDIVCLQETKTED---KT 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + +N+ + +A+ K + + L D +A R Sbjct: 45 FP-------FEAIQSLNYHIETCGQKSYNGVAILSKYQPI--EMIKKLPGDDLDEQA--R 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E IN + + + +I+L + + S + Y S Q +Q+ E Sbjct: 94 F-IEATFTINSQILRIGNIYLPNGNPIASTKYDYKISWIKRFLQFA------SQRLELEE 146 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPN-----------------DSLIRFPKEKDS--R 244 + AGD+N +D D IR + Sbjct: 147 ALIFAGDYNIVPQPRDCHDSIMLQNDACFTLEVRQAFQKLQNMGFTDAIRATNDAHHIYS 206 Query: 245 CN---ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ++ +NK ID+ ++ A FL D + SDH P+ + Sbjct: 207 FWDYFSDSWRKNKGMRIDHVMLSPEATTFLHSAYI-------DKKPRGCVKPSDHTPVIV 259 Query: 301 DYD 303 D Sbjct: 260 ALD 262 >gi|269796627|ref|YP_003316082.1| extracellular nuclease [Sanguibacter keddieii DSM 10542] gi|269098812|gb|ACZ23248.1| predicted extracellular nuclease [Sanguibacter keddieii DSM 10542] Length = 1591 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 93/314 (29%), Gaps = 65/314 (20%) Query: 44 KNSVKRTTSDYTLLRQY-------AKNLDADIVFLQEMGSYNAVAKV------------- 83 + R D L + LDAD+V L E+ + A+ + Sbjct: 503 PGNGPRGAWDADNLERQQDKIVDAITRLDADVVGLMEIENSAALGEAPDEAVGTLVAALN 562 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNND--IHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ W S L + +D + I+ AV V L GA +F Sbjct: 563 AEAGEDRWAFVESPADLPAVADQDVISGAIIYQTAAV--TPVGESHALGTLSGAGQTFVN 620 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLK-------SFCFLDSLENTYSPSCSLLSQQAQWLK 192 A GK +V+ H K S D + ++ + QA L Sbjct: 621 AREPIGQAFEPADGGKPFFVVANHFKSKSAGGASGAERDLGQGAWNAA-RT--AQATALA 677 Query: 193 DWITQ------KKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 W+ + E+ VP ++ GDFN + D + E Sbjct: 678 TWVDETALPAVSAEAGVPVEDVLLLGDFN----AYTHEDPLLH-LYGAGYQDATTLEGRG 732 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK------------- 290 + N D+ +++++A + EI E + Sbjct: 733 ELTYSYQGLNGSL-DHVLLNESAAERFTGSDVWEINAPESIALEYSRFNVTAGDFYRADA 791 Query: 291 -RLSDHCPISIDYD 303 R SDH P+ + Sbjct: 792 FRSSDHDPVVVGLT 805 >gi|302186656|ref|ZP_07263329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 233 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + +V + + S + + D Sbjct: 15 LREAVRTVSADIVFLQEVHGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 75 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 124 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D +++ Sbjct: 125 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRQRAD---ESLQG 170 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 171 SGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 219 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 220 HLSDHAPLAVELTL 233 >gi|289625360|ref|ZP_06458314.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647509|ref|ZP_06478852.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 2250] gi|330867768|gb|EGH02477.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330875589|gb|EGH09738.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. glycinea str. race 4] gi|331011241|gb|EGH91297.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 261 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY-NAVAKVFPK----NTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + A+ + + S + + D Sbjct: 43 LREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ ++ + +HL Sbjct: 103 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEVPY---AGRVHAVCVHL------ 152 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ L + + ++ P ++AGDFN ++ D ++ Sbjct: 153 -GLRESHRR------QQLNLLAE-LMERLPEGEPVIVAGDFN---DWRQRADAL---LEG 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + + K+ + P+ +D+ + + Sbjct: 199 TGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 247 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 248 HLSDHAPLAVELTL 261 >gi|257482179|ref|ZP_05636220.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 380 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 106/321 (33%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ +E + N H + T Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 187 SRFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 238 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 239 --TARHTGDTAQKQVVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 297 SELHELWEK------YPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|145531803|ref|XP_001451668.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419323|emb|CAK84271.1| unnamed protein product [Paramecium tetraurelia] Length = 352 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 88/248 (35%), Gaps = 39/248 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEM----GS 76 ++++++N L V DY R + ++ DIV LQE+ S Sbjct: 21 IKILTYNT---------FLRPPVVNNNGDDYKNERCELIIKELMNFDIVCLQEVFGFLNS 71 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAK 134 ++ K + + ++ + + S+ + + R + + +P Sbjct: 72 RKSILK---HKAFKLGFTYQAVSPSPSFFSSQMVDGGLVTLSRYPILSHEFKEFPYGILS 128 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D+ S G + + +NG+ + + + HL++ + S + Q K + Sbjct: 129 DNLSNKGV---LYTKILVNGQMLHLFNTHLQASYVGKESNVRATVSTRI--DQLYCFKKF 183 Query: 195 I-----TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + Q+ + ++ GD+N D ++ PND L +FP + N K Sbjct: 184 VHSTLEQQQAQENDLILLVGDYN--------IDSRYEQGYPNDVLKQFPILQQQLGNPQK 235 Query: 250 NLRNKIPI 257 I Sbjct: 236 YQEYDALI 243 >gi|283853514|ref|ZP_06370755.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] gi|283571095|gb|EFC19114.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] Length = 251 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 35/190 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+ SL D + + L AD+V LQE+ V Sbjct: 9 LRVATYNV-----HGWKSLGG------RRDIGRFVETIRELAADVVALQEV--------V 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-GN 142 P + T + N + + D R Sbjct: 50 MPPLIEEECLERAVAGPLGMHAVSGPTLTRLGTEYGNALLTRFPVEQSRGHDLSVRGCEP 109 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R AVE+++ + G ++ V+ HL Q + L + ++++ Sbjct: 110 RGAVEVVLAVPGGRLRVIATHL--------GLRARER-----RIQTEALLALVRERQD-- 154 Query: 203 VPFVIAGDFN 212 VP V+ GDFN Sbjct: 155 VPTVLLGDFN 164 >gi|300771475|ref|ZP_07081350.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] gi|300761464|gb|EFK58285.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] Length = 279 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 99/312 (31%), Gaps = 47/312 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++A V + T + AQ+ R+ ++NI + + ++W L Sbjct: 1 MRKTIIATVLVALVSTMTYAQQFRIATYNIRQKNTHDTGNMWDERK-------EALTNLI 53 Query: 62 KNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K +I QE + ++ P + I + + + V K Sbjct: 54 KFHQFEIFGTQEGFNDQLADMERLLPGFKY-IGVGRDDGAEKGEYSAIFYDTKRFEVSKS 112 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTY 177 L + K + A R + + K+ +++ H F Sbjct: 113 GTFWLSATDISKPNKGWDA-ALPRICTWGIFKDKKTKKQFILMNTH-----FDHVGVTAR 166 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ +A+ +P +I GDFN + D+ + T+ + + Sbjct: 167 KESAKLMMAKAKEF--------AGNLPLIITGDFN-----VSETDEAYFTLANSGIVADS 213 Query: 238 PKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + DSR N ID+ I FS Y GK Sbjct: 214 YSKIDSRYAPNSTFNGFGKSIKPAERIDHIF---------ITPQFSVKKYGILTDTYVGK 264 Query: 291 RLSDHCPISIDY 302 SDH P+ +D Sbjct: 265 YPSDHFPVMVDL 276 >gi|254584744|ref|XP_002497940.1| ZYRO0F16984p [Zygosaccharomyces rouxii] gi|186929042|emb|CAQ43367.1| Inositol phosphosphingolipids phospholipase C [Zygosaccharomyces rouxii] gi|238940833|emb|CAR29007.1| ZYRO0F16984p [Zygosaccharomyces rouxii] Length = 462 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 82/250 (32%), Gaps = 45/250 (18%) Query: 24 VRLVSWNINTLSEQEGVSL----------WKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + +W + LS L + + + + L +++++ D+V LQE Sbjct: 28 LTFNTWGLKWLSTNRKERLRAIGDELSGRFTSVPIPGSDNIELGKRHSQFEQYDVVALQE 87 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAV--RKKNVRVLQQSYP 129 + W R + I T +A+ R +P Sbjct: 88 VWCQE---------DWDYIVMRCSENYPYHRIFYSGIITGPGLAILSRIPIESTFLYRFP 138 Query: 130 LLGAKDSFSRAGNRRA--VELL----VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L G + R V + ++ N + +++ H+ + +L+ + +C Sbjct: 139 LNGRPTAVHRGDWYVGKSVAITLLQQIDNNTPPLAIMNSHMHA---PYALQGDAAYACHR 195 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLGNNDDF-----WKTI----DPN 231 + QA K++ ++ GD N + +++ D+ W+ + DP Sbjct: 196 -ACQAWDFAKLANLYKKAGYAVIVTGDLNSRPGSLHHRLLTDETDLVDSWEQLYGQQDPE 254 Query: 232 DSLIRFPKEK 241 P E+ Sbjct: 255 TLAKLKPSEQ 264 >gi|116496201|ref|YP_807935.1| metal-dependent hydrolase [Lactobacillus casei ATCC 334] gi|116106351|gb|ABJ71493.1| Metal-dependent hydrolase [Lactobacillus casei ATCC 334] Length = 355 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 96/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNL---DADIVFL 71 Q +++NI S S + + K + + Y+ + K + D+ F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSKKSVRTSINGVIKTTQAQNPDVAFY 110 Query: 72 QEMGSYNAVA------KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ + K+ + + + A + Sbjct: 111 QEIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKAKSGILTLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I Q + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFTKLFKYIEQAYKQGNYVMVAGDYNHRLLKDTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + ID +++ N + Sbjct: 281 SKLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|108762235|ref|YP_632710.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108466115|gb|ABF91300.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 329 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 101/310 (32%), Gaps = 41/310 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL----SEQEGVSLWKNSVKRTTSDY--- 54 V A L P ++ VR+ ++N+ L + + T S++ Sbjct: 40 NEPCVGAACGPLQPPDTALEGSVRIATFNVQRLFDTVCDSDACGGSNYEALPTPSEFGLQ 99 Query: 55 -TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR-DSNNDIHT 112 L L+AD+V L E+ + ++ S +S+ ++ Sbjct: 100 ADRLASAISRLNADVVLLAEVETQASL---------DALTSRLPRFGYSELGETGAAASV 150 Query: 113 AIAVRKKNVRVLQQSYPLLGA--KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +AV + + + D + +R +E+ ++++GKK+ V H +S Sbjct: 151 DVAVLSVHPITDVRGHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRS---- 206 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWKTID 229 + + ++ + + V+ GD N + ++ Sbjct: 207 ----KSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVLGGDLN-----DVPGSEPITALE 257 Query: 230 PNDSLIRFPKEKDSR-CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + +L+R ++ + + ID+ + + + + SF Sbjct: 258 RDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTY-VPGSFRAAR-----DPRG 311 Query: 289 GKRLSDHCPI 298 G SDH + Sbjct: 312 GYGGSDHAAV 321 >gi|297203458|ref|ZP_06920855.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197716336|gb|EDY60370.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 259 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 64/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE A Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESTGTDVLCLQEAKVAEA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGN 142 + R + +AV + + P D Sbjct: 41 ------QFPFDQLREAGYEAAVHATGRWNGVAVISRVGLDDVVKGLPGDPGYDGAPEPR- 93 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++W +++ + +D Y Q + LK + Sbjct: 94 ----AISATCGPARVW--SVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGS 141 Query: 203 VPFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 PF + GD+N +DD ++ + R + + + Sbjct: 142 RPFAVLGDYN----VAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLSDVVPRPLKY 197 Query: 258 DYFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDY 302 D+ + + ++ + + + + R SDH P+ +D Sbjct: 198 DHPFTYWDYRQLCFPKNRGMRIDLVYGNESFAKAVTDAYVDREERKGKGASDHAPVVVDL 257 Query: 303 D 303 D Sbjct: 258 D 258 >gi|298488865|ref|ZP_07006890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156618|gb|EFH97713.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 363 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 104/321 (32%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLS----------EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + + + + + ++ DIV Sbjct: 52 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLSYNLDEVARVIRDEQPDIVL 111 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ +E + N H + T Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGSVGRKLAT--L 169 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 170 SRFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 221 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 222 --TARHTGDTAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 279 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 280 SELHELWEK------YPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 333 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 334 RVSARVRRDDTLLISDHLPVI 354 >gi|209885397|ref|YP_002289254.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] gi|209873593|gb|ACI93389.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] Length = 260 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 98/304 (32%), Gaps = 67/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + K + D+V LQE+ + + Sbjct: 1 MRIATWNVN------------SVRQR----LDHLVTWLKEREPDLVCLQEI---KCLDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K + D +R Sbjct: 42 FPR-------EPLEALGYNVVTHGQKTFNGVALLSKYRFEETRPQLAGDPDDLHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + ++L + +++ + Y S L + ++ +S Sbjct: 92 --LEGVVSHKDGTFRLACLYLPNGNPVNTEKYPYKLS------WMDRLITYARERIKSEE 143 Query: 204 PFVIAGDFN----------------RKINYLGNNDDFWKTID-PNDSLIRFPKEKDSR-- 244 PFV+AGDFN + D F ++ +R + + Sbjct: 144 PFVLAGDFNVIPTPADVYNPQAWLGDALFLPQTRDKFQTLLNLGLTDALRATTDAPQQYT 203 Query: 245 ---CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 A +N ID+ +M A L D ++ SDH P+ Sbjct: 204 FWDYQAGAWQKNNGIRIDHLLMSPPAADRLQAVGI-------DKHVRGWEKASDHVPVWA 256 Query: 301 DYDF 304 D DF Sbjct: 257 DLDF 260 >gi|302562602|ref|ZP_07314944.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] gi|302480220|gb|EFL43313.1| endonuclease/exonuclease/phosphatase [Streptomyces griseoflavus Tu4000] Length = 278 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 86/314 (27%), Gaps = 73/314 (23%) Query: 5 YVLALVFFLVPCT---ASVAQKV-----------RLVSWNINTLSEQEGVSLWKNSVKRT 50 ++A + L P + A A + R+++WN+ Sbjct: 13 VIVACMVLLGPSSPIGAPFAGSLPVDAVRDVVPNRVMTWNL--------------CNPCE 58 Query: 51 TSDYTLLRQYAKNLDADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINH 101 SD + A++ ++ LQE ++ + + R Sbjct: 59 ESDVDRAAEIARH-APQVIALQEACARDVERIRDHLESLHGLVYHVEYGTVL---RNWGR 114 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQ--SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 AV + YP G++D R + + E+ G+ + V Sbjct: 115 CGGAPWKPGAFGQAVLSAAPMTDRVLVEYPDGGSED-------RGYMAVTTEVGGRSVRV 167 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + HL + QA L + + + + ++ GDFN + Y Sbjct: 168 FNTHL---------AERRQEEVR--AGQAGVLAEAVARHDRA----IVLGDFN-AVPYAP 211 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 W+ + D R C + DY + A Sbjct: 212 ELARMWELAEDADPRCRPSD--AGTCEPTTDWN--SKFDYVFLRGIAPLR---HHVEHTR 264 Query: 280 YNEDDIKSRGKRLS 293 Y++ + S Sbjct: 265 YSDHHLLRTDLAPS 278 >gi|158335038|ref|YP_001516210.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Acaryochloris marina MBIC11017] gi|158305279|gb|ABW26896.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase, putative [Acaryochloris marina MBIC11017] Length = 2593 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 75/233 (32%), Gaps = 39/233 (16%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDA-DIVFL 71 + ++ + S+N+ L +G + + + L Q NL A DI+ L Sbjct: 1383 ITTLVGTDTQLTVASYNVLNLDPNDGDGSTDVANGQ----FDRLAAQIVNNLQAPDIIAL 1438 Query: 72 QEMGS------------YNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTA 113 QE+ + + T+ F + + +I A Sbjct: 1439 QEIQDNSGSVDDGTTAADQTLQMLVDAIAAAGGPTYE-FRTIDPEDGAFGGQPGGNIRNA 1497 Query: 114 IAVRKKNVRVLQQSYPLL--------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 V + S LL GA + + G+R + E NG+ + V++ H Sbjct: 1498 FLYNPDRVSIDDSSLQLLTPEVLAAAGASNPDAFEGSRTPLAANFEFNGQTVQVINNHFS 1557 Query: 166 SFCFLDSLENTYSPSCSLLSQ----QAQWLKDWITQKKESLVP--FVIAGDFN 212 S + P QAQ + D++ + ++AGD N Sbjct: 1558 SRFGSSPIFGATQPFIQAGEDAREAQAQAVNDFVDAQLADNPDANIIVAGDLN 1610 >gi|115524629|ref|YP_781540.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] gi|115518576|gb|ABJ06560.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] Length = 263 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 99/305 (32%), Gaps = 69/305 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + + DIV LQE+ V + Sbjct: 1 MRIATWNVN------------SVRQR----LDHLLTWLNDCSPDIVCLQEI---KCVDEA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K+ +D +R Sbjct: 42 FPR-------EPIEALGYNVVTHGQKTFNGVALLSKHPLDEATPRLAGDEEDVHARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E +V + + V ++L + +D+ + Y + Q L D+ ++ + Sbjct: 92 --LEGVVSLKHGVVRVACLYLPNGNPVDTEKYPYK------LKWMQRLFDYTKERLRTEE 143 Query: 204 PFVIAGDFN--------RKINYLGNNDDFWKTIDPN----------DSLIRFPKEKDSR- 244 P ++AGDFN +D +K +R + + Sbjct: 144 PLILAGDFNVIPAPADVYN-ALAWVDDALFKPQTRESFQALLGLGLTDALRASTDAAGQY 202 Query: 245 ----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 203 TFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGI-------DRHVRSWEKPSDHVPVW 255 Query: 300 IDYDF 304 D+D Sbjct: 256 ADFDL 260 >gi|289774208|ref|ZP_06533586.1| secreted protein [Streptomyces lividans TK24] gi|289704407|gb|EFD71836.1| secreted protein [Streptomyces lividans TK24] Length = 274 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 51/257 (19%) Query: 53 DYTLLRQYAKNLDADIVFLQEM-----------GSYNAVAKVFPKNTWCIFYSTERLINH 101 D + + AD+V LQE+ +A++ + + + + N Sbjct: 52 DLRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLG---YHVVF-GANIDNS 107 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + A+ + + L + R +++ +GKK+ + Sbjct: 108 PPAPGGHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDV----HGKKVEFYN 163 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D L QQ + D I +K P ++ GDFN Sbjct: 164 THLAAGSQADRL------------QQTAQVVDLIGTRK----PGILVGDFN--------- 198 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 P + + + A Y LI + Sbjct: 199 ------ALPAAPESQPLQNAYTDAWAKSLHARGDGATYPAQSPTERIDLIYATRRVTPLV 252 Query: 282 EDDIKSRGKRLSDHCPI 298 +K SDH P+ Sbjct: 253 AQVLKDDPAA-SDHRPL 268 >gi|256790330|ref|ZP_05528761.1| secreted protein [Streptomyces lividans TK24] Length = 279 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 51/257 (19%) Query: 53 DYTLLRQYAKNLDADIVFLQEM-----------GSYNAVAKVFPKNTWCIFYSTERLINH 101 D + + AD+V LQE+ +A++ + + + + N Sbjct: 57 DLRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLG---YHVVF-GANIDNS 112 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + + A+ + + L + R +++ +GKK+ + Sbjct: 113 PPAPGGHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDV----HGKKVEFYN 168 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D L QQ + D I +K P ++ GDFN Sbjct: 169 THLAAGSQADRL------------QQTAQVVDLIGTRK----PGILVGDFN--------- 203 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 P + + + A Y LI + Sbjct: 204 ------ALPAAPESQPLQNAYTDAWAKSLHARGDGATYPAQSPTERIDLIYATRRVTPLV 257 Query: 282 EDDIKSRGKRLSDHCPI 298 +K SDH P+ Sbjct: 258 AQVLKDDPAA-SDHRPL 273 >gi|210634817|ref|ZP_03298323.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] gi|210158621|gb|EEA89592.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] Length = 280 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 90/314 (28%), Gaps = 65/314 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + ++ ++L SWN+N L L K+ LDADI+ LQE Sbjct: 4 TASRTLKLASWNVNGLR----AVLKKDPS---------FTDIVSELDADILGLQETKLQE 50 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 ++ ++ ER TA+ R + + V L + + Sbjct: 51 GQVEIDLPGYHQVWSYAERKGYSG---------TAVFTRDEPLSVRHADAVLAAGRAAGL 101 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---- 194 V + V + + F F+D + L + W + Sbjct: 102 TDDQLELVAVAATEG----RVCALEFERFWFVDVYTPNAQGELARLDTRMAWDDAYRAFL 157 Query: 195 ITQKKESLVPFVIAGDFN--RK-------------INYLGNNDDFWKTIDPNDSLIRFPK 239 ++ + E+ P V GDFN + + + F Sbjct: 158 LSLEDETGKPVVTCGDFNVAHNEIDLKNPKSNRGNAGFSDEERSKFVELLDAGYTDTFRA 217 Query: 240 EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 A + IDYF++ + + ++ Sbjct: 218 ANPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDSIADRVRATGIRSDIFG--------- 268 Query: 291 RLSDHCPISIDYDF 304 SDHCP++++ Sbjct: 269 --SDHCPVTLEIGL 280 >gi|114778638|ref|ZP_01453454.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] gi|114551103|gb|EAU53664.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 107/305 (35%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + L Y ++ D++ LQE + +A V Sbjct: 1 MKITTWNVNSLNVRLPHVL----------------AYLRDEQPDVLALQETKTPDAGFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +S ++ + +A+ + +QQ L D Sbjct: 45 AELEAAGYKVIFSGQKT------------YNGVAMLAR--SSMQQVVNDLPGLD----DP 86 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + ++ + V+++++ + + S + Y + Q L D++ ++ + Sbjct: 87 QRRLLAATID----GMRVVNVYIPNGQEIGSDKYAYK------MRWLQALCDFLQEELKQ 136 Query: 202 LVPFVIAGDFNRKINYLGNND---DFWKTIDP-------NDSLIRFPKEKDSRCNANK-- 249 V+ GDFN + +D K + + L + + K Sbjct: 137 HDRLVLLGDFNIAPADIDVHDPTRWQGKILCSEPEREFFSTLLQLGLIDGVRSLHPEKEM 196 Query: 250 --NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ ++ + + + Y E D R SDH P+ Sbjct: 197 FSWWDYRMSAYRRGWGVRIDHLLVTH---ALALSAAGVAVKYRELD------RPSDHAPV 247 Query: 299 SIDYD 303 I+++ Sbjct: 248 WIEFE 252 >gi|94732377|emb|CAK05007.1| novel protein similar to vertebrate TRAF and TNF receptor associated protein (TTRAP) [Danio rerio] Length = 387 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 94/281 (33%), Gaps = 50/281 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++SWN++ L +L R L Y D+VFLQE Sbjct: 140 KLSIISWNVDGL-----DTLNLAERARG------LCSYLALYTPDVVFLQE--------- 179 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + + S++ T I +RK V+ L+ Sbjct: 180 LIPA--YVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTTQM-----M 232 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +G+K++++ HL+S C S E T +Q + + I + Sbjct: 233 RNLLIAQVTFSGQKLYLMTSHLES-CKNQSQERT---------KQLRVVLQKIKE-APED 281 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + AGD N + + N W+ + + R+ + + N ++ Sbjct: 282 AIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHC-RYTWDTKANSNKTVPYVSRC 340 Query: 256 PIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + + + I + D SDH Sbjct: 341 RFDRIFLRSAKTRPAVTPDHMALIGMEKLDCGRYT---SDH 378 >gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 788 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 99/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAVEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|330888867|gb|EGH21528.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori str. 301020] Length = 261 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY-NAVAKVFPK----NTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + A+ + + S + + D Sbjct: 43 LREAVRTVSADIVFLQEVHGEHQSHARSVKDWPKISQYEFLADSMWNDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ ++ + +HL Sbjct: 103 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEMPY---TGRVHAVCVHL------ 152 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ L + + ++ P ++AGDFN ++ D ++ Sbjct: 153 -GLRESHRR------QQLNLLAE-LMERLPEGEPVIVAGDFN---DWRQRADAL---LEG 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + + K+ + P ++ + S + + Sbjct: 199 TGLHEVFVERFGA---PAKSFPARWP----LLRLDRIYIRNATSHRPKVLSS----RPWS 247 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 248 HLSDHAPLAVELTL 261 >gi|91215919|ref|ZP_01252888.1| extracellular nuclease [Psychroflexus torquis ATCC 700755] gi|91185896|gb|EAS72270.1| extracellular nuclease [Psychroflexus torquis ATCC 700755] Length = 1215 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 23/216 (10%) Query: 14 VPCTASVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + V +++ S+N+ TL+E+ S + +R + L+ADIV Sbjct: 793 IASPEDVGGSLKVASFNVLNYFTTLNERGANSTAELDRQR-----EKIAAAICGLNADIV 847 Query: 70 FLQEM--GSYNAVAKVF-PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 L E+ A+ + N T + + + I A + L+ Sbjct: 848 GLIEIENNGTTALDDLLNGPNGINTLCGTTYVAVDAGVIGTDQIAVAF-IYNTATVSLEG 906 Query: 127 SYPLLGAK--DSFSRAGNRRAVELLV-EINGKKIWVLDI-HLK---SFCFLDSLENTYSP 179 ++ +L A F+ NR A+ EI+ + I + + HLK S C D N + Sbjct: 907 THAILDASVDPRFNDNKNRPALAQTFKEISTEGILTIVVNHLKSKGSSCSGDQDLNDGAG 966 Query: 180 SCS-LLSQQAQWLKDWITQ--KKESLVPFVIAGDFN 212 +C+ ++ A L DW+ ++I GD N Sbjct: 967 NCNLTRAEAASALVDWLATDPTDSGDSDYLIIGDLN 1002 >gi|258648749|ref|ZP_05736218.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] gi|260851066|gb|EEX70935.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] Length = 337 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 104/346 (30%), Gaps = 55/346 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNIN----TLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 K +L + F+L TA + R++++N+ T+ ++ R D R Sbjct: 2 KRLLFVFFYLCLLTAGAQSRFRVMTYNVENAFDTIHDEGKQDFDFLPTGRLHWDTPKYRA 61 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVR 117 + + I + EM VA +N I E L++H++ S N + T A R Sbjct: 62 KLSRIASVIAGVGEMQPPKLVALCEVENARVI----EDLLHHTRLHSFNYRYCMTESADR 117 Query: 118 KKNVRVL---QQSYPLL---GAKDSFSRAGNRRAVELL----VEINGKKIWVLDIHLKS- 166 + L ++ LL + + ++L + +G + V +HL S Sbjct: 118 RGIDVALLYQPSTFHLLYMDTLRVIPANKHENPTRDILHVCGLVPSGDTLSVFVVHLPSR 177 Query: 167 -FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF- 224 ++ + L Q+ L + VI GDFN + Sbjct: 178 RGGVRRTMPYRCRVA-QRLRQEIDGL-----TRNGRDRKVVIMGDFNDEHTDPSIATVLE 231 Query: 225 ---WKTIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYK---------- 268 W L + + + +D +++ Sbjct: 232 ARKWTDAIQPPFLCVLTADLKAANGIQGTHKFQGRWAQLDQIIVNDRLLTTEGLHTSPKD 291 Query: 269 ----------FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y SDH P+ +D+ + Sbjct: 292 CFIFTDAPLLKYDAGDHGVVPYRSFLGSFYQGGFSDHLPVVVDFYY 337 >gi|84686936|ref|ZP_01014820.1| hypothetical protein 1099457000247_RB2654_04259 [Maritimibacter alkaliphilus HTCC2654] gi|84665133|gb|EAQ11613.1| hypothetical protein RB2654_04259 [Rhodobacterales bacterium HTCC2654] Length = 281 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 94/308 (30%), Gaps = 63/308 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++SWN+ + S + Y DI + E+ S +V Sbjct: 7 LKVLSWNVEHFTGAGTGSRRDRV--------ARVAGYVAGEAPDIFAIMEVES----GRV 54 Query: 84 FPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F + + + + + I TA +K + + Sbjct: 55 FSEFVNRMPGYVFAITEGPQTQETLIGIRHGI-TAFMTQKNEFK--------------RN 99 Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G R + V +G + +L HLKS L + L + + + + Sbjct: 100 NPGLRPGALVTVTAPDGSHLPILFNHLKSLPSPEGFGLRDAMFEKAFGLKRTLDGVSEGL 159 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL------------IRFPKEKDS 243 Q+ V F++AGD N L ++D + I + + +R PK D+ Sbjct: 160 GQE----VRFILAGDLNTMGMTLKDSD---QDITAAEEIARLDRRFRRYGMVRLPKTHDT 212 Query: 244 RCNANKNLRN-KIPIDYF-------VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N +D+ +DQ + ++ + R SDH Sbjct: 213 TFNNGSTSSYAPADLDHVFATETLTFVDQGQGAKVHVGGWAVEAEDASR-DDWIARFSDH 271 Query: 296 CPISIDYD 303 P+ Sbjct: 272 APLMFTVT 279 >gi|299145020|ref|ZP_07038088.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] gi|298515511|gb|EFI39392.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] Length = 289 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 82/304 (26%), Gaps = 40/304 (13%) Query: 9 LVFFLVPCTASV--AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L C S+ AQ++ + S+N+ S +R L + D Sbjct: 4 LFIVLALCGVSILNAQQLNVASYNVRN-SNPNDAKAGNGWEQRCPV----LTRLITFHDF 58 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DI QE+ + + + I RK ++L+ Sbjct: 59 DIFGAQEVKHNQLEDMLNALPQYSYIGVGRDDGKTKGE------YAPIFYRKDKFKLLKS 112 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKK-------IWVLDIHLKSFCFLDSLENTYSP 179 L S G A + K W ++H+ Sbjct: 113 GNFWLSEDTSKPNKGWDAAYTRICTWGEFKDITGKFRFWFFNLHM-----DHIGVVARRE 167 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLI 235 S L+ + + + P ++ GDFN + + + L Sbjct: 168 SAKLVISKIKEM--------CGKDPVILTGDFNVDQTSESYQVLHESGILSDSYEVAQLR 219 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SD 294 + N N N+ ID+ + +N + R+ SD Sbjct: 220 YATNGTCAGWNPNTYTPNR--IDHIFVTKNFAVEKYGVLTDTYRIKNEATGKYEARIPSD 277 Query: 295 HCPI 298 H P+ Sbjct: 278 HFPV 281 >gi|86136001|ref|ZP_01054580.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] gi|85826875|gb|EAQ47071.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] Length = 403 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 81/258 (31%), Gaps = 72/258 (27%) Query: 25 RLVSWNINTL-SEQEGVSLWKNSVKRT---TSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + S+N+ L + +++ SD+ + LDADIV QE+ + Sbjct: 5 TIASFNVKNLIGPDQEYYRFQSYTPEEYAWKSDW--MADQILTLDADIVGFQEIFEEEPL 62 Query: 81 AKVFPKNTWC-IFYSTERLINHSKRDSNNDIHT--------------------------- 112 +V + I + + + SKR I Sbjct: 63 REVIAEADARGIQANAATVPDRSKRYHRKAIFRKLAYGPYGDAGLAFAPNINDTDKPGQR 122 Query: 113 --AIAVRK-----KNVRVLQQSYPLLGAK-----------DSFSRAGNRRAVELLVEING 154 +A+ V+Q+ P L R +R ++ + ING Sbjct: 123 RPGLAILSRFGFVGTPEVIQELDPPLDIPMSHLGGEEEAGHYTLRCLSRPILKARIPING 182 Query: 155 KKIWVLDIHLKS--FCFLDSL---------ENTYSPSCSLLSQQAQWL----KDWITQKK 199 + + V + HLKS F+ Y P+ L L + W+ ++ Sbjct: 183 QIVTVFNCHLKSKLGEFITPPGAPQAPETVLTAYDPAGRALGALRSALRRMGEAWVLRRA 242 Query: 200 -----ESLVPFVIAGDFN 212 E P ++ GDFN Sbjct: 243 ILDELEQDRPVLVLGDFN 260 >gi|330888794|gb|EGH21455.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. mori str. 301020] Length = 380 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 106/321 (33%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ +E + N H + T Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 187 SRFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 238 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 239 --TARHTGDTAQKQIVATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 297 SELHELWEK------YPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|325280301|ref|YP_004252843.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] gi|324312110|gb|ADY32663.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] Length = 351 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 98/341 (28%), Gaps = 52/341 (15%) Query: 4 KYVLALVFFLVPCTASVAQK-VRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY- 54 K + L V VAQ R++ +N+ L S + + T + Y Sbjct: 19 KLLGILFLLCVLTMPVVAQDHCRIMFYNVENLFDTADDPSTADDEFTPRGKKHWTKAKYT 78 Query: 55 TLLRQYAKNLDA--D-----IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 L + A+ +D+ D IV L E+ + + + I H Sbjct: 79 DKLLKIAEVIDSVGDKELPCIVGLAEVENRWVLEDL---TQKTALADGNYGIVHQDSPDR 135 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 I A+ RK +L+ + L + + R + ++ + H S Sbjct: 136 RGIDVALLYRKDCFELLETDFLRLSFPE-DTTIRTRDILYASGVLDSDTLHFFVCHFPSM 194 Query: 168 CFLDSLEN-TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 + + S + + L + + + + VI GD N K N Sbjct: 195 IGGEKQSEWRRERAASTVRHKVDSL---LAVQSRAGI--VIMGDLNGKANTPAQ-KVLGT 248 Query: 227 TIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPIDYFVMDQ----NAYKFLIQESFSE 277 + + + N ID+ ++ + + Sbjct: 249 KSSDKKPRCKDLYNTGYYLLKKNYGSYRYKGNWQTIDHLILSGALLDGHSVWKADRRLTV 308 Query: 278 ILYN---EDDIKSRGKRL-------------SDHCPISIDY 302 + E+D G + SDH PI ID Sbjct: 309 FSASFLLEEDKTYFGYKPCPTYRGPRYVGGYSDHLPIYIDL 349 >gi|85716516|ref|ZP_01047487.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] gi|85696705|gb|EAQ34592.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] Length = 279 Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+ +WN+N + +R L + D+V LQE+ Sbjct: 14 MRIATWNVN------------SIRQR----LDHLITWLGETTPDVVCLQEIKCVDEQFPR 57 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + ++ N +A+ K + D SR Sbjct: 58 EAIEALGYNVVTHGQKTFN------------GVALLSKFPFDETRPRLAGDDGDVQSRF- 104 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E +V + + + ++L + ++ + Y + L ++ ++ +S Sbjct: 105 ----LEGVVSLKQGIVRIACLYLPNGNPPNTEKYPYK------LKWISRLIEYSKERLKS 154 Query: 202 LVPFVIAGDFN-----RKINYLGN--NDDFWKTIDPN----------DSLIRFPKEKDSR 244 FV+AGDFN R + + +D ++ +R + Sbjct: 155 EEAFVLAGDFNVIPAPRDVYNPASWVDDALFRPHTRQAFQTLLGLGLTDALRAASDAAGE 214 Query: 245 -----CNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A +N ID+ ++ A L D ++ SDH P+ Sbjct: 215 YTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLGGVGI-------DRHVRGWEKASDHVPV 267 Query: 299 SIDYDF 304 ID D Sbjct: 268 WIDLDL 273 >gi|312963202|ref|ZP_07777686.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] gi|311282468|gb|EFQ61065.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] Length = 362 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 39/225 (17%) Query: 15 PCTASVAQKVRLVSWNINTL----------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 T Q +++++WN+ L + + +V+ + + ++ Sbjct: 45 APTLLPGQALKVMTWNVQYLAGKNYVFWYDTTDGSGPDDRPTVEDMAVSLDEVARVIRDE 104 Query: 65 DADIVFLQEMG---------SYNAVAK-----VFPKNTWCIFYSTERLIN-HSKRDSNND 109 DI+ LQE+ A+ + ++P + + + + N H Sbjct: 105 QPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSAQAFDWKADFVPNLHIFGSVGRK 164 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF 167 + T R + + P+ A + + A+ L +G ++ VL+ L + Sbjct: 165 LAT--LSRYQIEHAERLQLPVPDANLISRQFQPKPALLLTYLPLSDGGQLAVLNTRLDAG 222 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 S + +Q + + + + P++I GDFN Sbjct: 223 APGRSA----------VQEQVKTTVKLLDKFEGRGTPWLIGGDFN 257 >gi|148975846|ref|ZP_01812635.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] gi|145964591|gb|EDK29844.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] Length = 430 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 102/294 (34%), Gaps = 38/294 (12%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEM 74 S A + ++++N+ L G + D + A+ + + D+VF+QE+ Sbjct: 159 TPPSDANSINILTYNV-WLLPYIGEYM-------NDRDI----RIAEAVKSHDVVFMQEV 206 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ + + + ++H ++ + + +++Q+ + Sbjct: 207 FRRENELRL--NADMRLHF---QYVSHKLDGGGSNTYDGGVITYSKYPIVEQAQHVFDNC 261 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 A ++ + + + + + ++HL S +S E+ +Q + + Sbjct: 262 RGTDCAADKGVLYTKIIKDSRPYHLFNLHLGS---WNSREHRNIR-----MRQVGEILAF 313 Query: 195 ITQKK-ESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + Q P + GDFN K + + + +D + ++ N+N Sbjct: 314 VEQLGLPENEPVIFGGDFNIAKHK--FPLDFTQMLRVLDLQEPPLKGSLAHSYDPLVNQN 371 Query: 251 -----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +DY + N + +DD+ LSDH +S Sbjct: 372 LSDSDQSAQERLDYLLYSNNGSVVASSSKIEVLRNFDDDMWGV-WDLSDHLAVS 424 >gi|269963240|ref|ZP_06177574.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832045|gb|EEZ86170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 317 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 97/301 (32%), Gaps = 30/301 (9%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTT-SD-YTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + N+ N ++ ++N R D + + L+ DI+ LQE+ S Sbjct: 7 ITFATANLFNFVAPPGAYYDFENIYSRDDWQDKLAWTKSQFEQLNPDIIGLQEVFSIEET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137 F + + F + + + A+A R V L D Sbjct: 67 KTFFAEMGYEHFACVDT-PHIEGDYICSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDS--LENTYSPSCSLLSQQAQWLKDW 194 + +R+ V +V + V HLKS DS E P LS Q + + Sbjct: 126 APPFSRKPVRACVVHPIIGHLSVYVTHLKSQRPADSTTPEEASRPIARWLSTQQRGWEAA 185 Query: 195 ----ITQKKE--SLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-DSLIR-------FPKE 240 + Q++ + +P V+ GD N+ I N+ + + L Sbjct: 186 MLRDVMQRQYALNSMPTVLMGDMNQGITSTSVNNVLTEHYGDSVTDLQLNDGWELQVTPS 245 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 +SR + + +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDAHLINPSFERDKNASD 305 Query: 295 H 295 H Sbjct: 306 H 306 >gi|167917123|ref|ZP_02504214.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei BCC215] Length = 270 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 54/243 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VA ++ VSWN++ G + W +R + + AD+ FLQE Sbjct: 9 LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVASTHADVYFLQE 57 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----------------V 116 A+A+ P+ + + D + T IA Sbjct: 58 -----AMARRMPRP--VLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSW 110 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL--VEINGKKIWVLDIHLKSFCFLDSLE 174 R N + L G D + RR + + G + +L HL Sbjct: 111 RHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLTGGAPVTLLCAHL---------- 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + L +Q W+ WI + + P V+AGDFN ++ ++ + I ++ Sbjct: 161 -ALTRAARL--RQMHWIAHWIERNARTG-PLVLAGDFN---DWRNDSIPLFGEIGLSEVA 213 Query: 235 IRF 237 Sbjct: 214 TLL 216 >gi|330470654|ref|YP_004408397.1| 5'-nucleotidase domain-containing protein [Verrucosispora maris AB-18-032] gi|328813625|gb|AEB47797.1| 5'-Nucleotidase domain protein [Verrucosispora maris AB-18-032] Length = 1369 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 96/329 (29%), Gaps = 61/329 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-------AKNLDAD 67 +V +R+ S+N+ G R ++ L + LDAD Sbjct: 445 AAPVNVGGDLRVASFNVLNYFVHFGG------DARGAANEAALAKQEAKIVSAISALDAD 498 Query: 68 IVFLQEM---------GSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIH 111 +V L+E+ A+ ++ TW + L +++D I Sbjct: 499 VVALEEIENSVRFSSSDPQRALKRLVAALNTADGAGTWDYVRTPTELPGAAQQDF---IT 555 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 TAI + Q D R + V+ H KS Sbjct: 556 TAIIFK---PAKAQPKGASRSVNDESVWFNAREPIAQTFTAGPLDFVVVANHFKSKSGAG 612 Query: 172 SLENTYSPSCSLLS-----QQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNNDDF 224 S +N S +QA L ++ Q K ++ GDFN D Sbjct: 613 SGDNADSGDGQGGWNGDRVRQATALATFVDQVKADSDTDNVLLLGDFN----AYTQEDP- 667 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSEI 278 + + D K S ++ +D+ + + + + Sbjct: 668 MQVLYGKDYRNLNNTGKTSYVFNGES----GSLDHALASPSLADRVTGVDVWQINAVESY 723 Query: 279 LYNEDDIKSR----GKRLSDHCPISIDYD 303 + D + + R SDH P+ + + Sbjct: 724 AFQYDGLAAFYAPDPYRASDHNPLVVGIN 752 >gi|241957489|ref|XP_002421464.1| non-LTR, zorro-like retrotransposon family polyprotein fragment, putative [Candida dubliniensis CD36] gi|223644808|emb|CAX40801.1| non-LTR, zorro-like retrotransposon family polyprotein fragment, putative [Candida dubliniensis CD36] Length = 449 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 51/207 (24%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + L F+ +K ++ S NIN L+ D+ L K + Sbjct: 1 MYLPTFIYSAHGEFWEKFKVTSRNINRLT-----------------DFKKLADLFK--GS 41 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ LQE+ A+ ++ + + ++ + I V+KK + Sbjct: 42 DVICLQELTDSGAM-RINRFSDFKLYSIPKGEA-------------GIVVKKKWEPFVSH 87 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L G R +L++ I+G KI + CF + + +L Sbjct: 88 PMVLANIL------GTRNIADLVLSIDGVKIRFI-------CFYGPSDQQEN----ILKL 130 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNR 213 + L + + + + ++ GDFN Sbjct: 131 -LKNLNGVLGRSETNHDEIIMLGDFNH 156 >gi|71736423|ref|YP_275358.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487634|ref|ZP_07005675.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556976|gb|AAZ36187.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157726|gb|EFH98805.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 242 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY-NAVAKVFPK----NTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + A+ + + S + + D Sbjct: 24 LREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 83 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ ++ + +HL Sbjct: 84 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEVPY---AGRVHAVCVHL------ 133 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ L + + ++ P ++AGDFN ++ D ++ Sbjct: 134 -GLRESHRR------QQLNLLAE-LMERLPEGEPVIVAGDFN---DWRQRADAL---LEG 179 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + + K+ + P+ +D+ + + Sbjct: 180 TGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 228 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 229 HLSDHAPLAVELTL 242 >gi|299770919|ref|YP_003732945.1| putative extracellular nuclease [Acinetobacter sp. DR1] gi|298701007|gb|ADI91572.1| putative extracellular nuclease [Acinetobacter sp. DR1] Length = 812 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 101/332 (30%), Gaps = 62/332 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNL---DADIVFLQEMGS 76 A +R+ S+N+ + T +++ R+ L DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIAN 519 Query: 77 --------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + K + W + + R + I AI K V+ L + Sbjct: 520 NGYGPNSAIANLTKALGSD-WKYV-----VPENLDRLGGDAIAVAIIYNSKRVKPLNKPV 573 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C- 181 D + A K V+ HLKS C +T + C Sbjct: 574 ----VLDLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDANSTDADQKDGQGCW 629 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTID 229 + + W+ + + ++ GD N +++ N + Sbjct: 630 NPTRVKAVDQIVQWLAKNPTQVQKQNALLVGDMNSYAKEEPILSFEKANYKVLLNDTKVG 689 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYN 281 + S N N N +D+ + D Y ++ + + + YN Sbjct: 690 QGTQAYSYVYGVASDANGNGGAGN---LDHAIADAALYPKVVRTFAWHINADEPTVLDYN 746 Query: 282 EDDIKSRGKRL---------SDHCPISIDYDF 304 E+ K L SDH P+ +D D Sbjct: 747 EEYKTDEQKALFFGEDAYRSSDHDPVIVDLDL 778 >gi|126736926|ref|ZP_01752661.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] gi|126721511|gb|EBA18214.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. SK209-2-6] Length = 404 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 74/261 (28%), Gaps = 78/261 (29%) Query: 25 RLVSWNINTL-SEQEGVSLWKNSVKRT---TSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + S+N+ L + +++ +D+ + +DADIV QE+ + Sbjct: 5 TIASFNVKNLIGPDQEYYRFQSYTPEEYAWKADW--MADQLLTMDADIVGFQEIFDAEPL 62 Query: 81 AKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V + I + + + SKR I +A D+ Sbjct: 63 RAVISEADTRGIAANAATIPDRSKRYHRKAIFRKLAY---GPYGDAGLAFAPNVNDTGEP 119 Query: 140 AGNRRAVELL------------------------------------------------VE 151 R + +L + Sbjct: 120 GHRRPGLAILSRFGFIGEPEVIQEMEQPLDIPMSGLGGDEEEGFYTLRRLSRPILKARIP 179 Query: 152 INGKKIWVLDIHLKS--FCF---------LDSLENTYSPSCSLLSQQAQWL----KDWIT 196 + + + V + HLKS F +S+ Y P+ L L + W+ Sbjct: 180 VGDQILTVFNCHLKSKLGEFITPAGAPYAPESVLTAYDPAGRALGSLRSALRRMAEAWVL 239 Query: 197 QKK-----ESLVPFVIAGDFN 212 ++ E P ++ GDFN Sbjct: 240 RRAILEELEQDRPVMVLGDFN 260 >gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 788 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L ++ QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVSHFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|157279947|ref|NP_001098489.1| deoxyribonuclease-1-like 2 [Bos taurus] gi|148743928|gb|AAI42237.1| DNASE1L2 protein [Bos taurus] gi|296473523|gb|DAA15638.1| deoxyribonuclease I-like 2 [Bos taurus] Length = 278 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 96/304 (31%), Gaps = 41/304 (13%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L+ L AS AQ +R+ ++NI + + +L Y Sbjct: 5 LTLLAMLWALGASRAQALRIGAFNIQ---SFGDSKVSDPGCGGVIA--QILAGY------ 53 Query: 67 DIVFLQEMGSYN-AVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTA---IAVRKKNV 121 D++ +QE+ + + V + I + N + D + RK V Sbjct: 54 DVMLVQEVRDPDLSAVSVLME---QINSVSRHEYNFVSSEPLGRDQYKEMYLFVYRKDTV 110 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 V+ Y A+D+FSR V++ ++ I L + + Sbjct: 111 SVVDT-YQYPDAEDAFSREP--FVVKVSA-PGSAATELVLIPLHA---APHHAVAEIDAL 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + + W + GDFN Y+ D + ++ + Sbjct: 164 YDVY--LDVIDKW------GTDDILFLGDFNADCKYVREQDWPAIRLRSSEVFKWLIPDS 215 Query: 242 DSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298 N + D V+ K L +S + + E+ + + L SDH P+ Sbjct: 216 ADTTVGNSDCAY----DRIVVCGSRLRKSLKHQSATVHDFQEEFGLDQTQALAISDHFPV 271 Query: 299 SIDY 302 + Sbjct: 272 EVTL 275 >gi|119897775|ref|YP_932988.1| putative extracellular nuclease [Azoarcus sp. BH72] gi|119670188|emb|CAL94101.1| putative extracellular nuclease [Azoarcus sp. BH72] Length = 943 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 100/355 (28%), Gaps = 71/355 (20%) Query: 16 CTASVAQKVRLVSWNI-NTLSEQEGVSLW----------KNSVKRTTSDYTLLRQYAKN- 63 +VA +++ S N+ N + +G + R D + A Sbjct: 478 AAPAVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKT 537 Query: 64 ------LDADIVFLQEMGSYN-----AVAKVFP------KNTWCIFYSTERLINHSKRDS 106 LDAD++ L E+ + A+A + + + + Sbjct: 538 VAAILALDADVIGLMEVENDGYGADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALG 597 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR------AGNRRAVELLVEINGKKIWVL 160 + I T + R V L + GA ++ NR A+ + + Sbjct: 598 TDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRPALAQSFRAADGARFTV 657 Query: 161 DI-HLKS---FCFLDSLE-------NTYSPSC-SLLSQQAQWLKDWITQ--KKESLVPFV 206 + HLKS C + C S A+ L W+ + Sbjct: 658 AVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVL 717 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV----- 261 I GD +N D + ++ + +D+ + Sbjct: 718 IIGD----LNAYAQEDPV-TALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSL 772 Query: 262 ---MDQNAYKFLIQESFSEILYNEDDIKSRG---------KRLSDHCPISIDYDF 304 + A + + S + YN D + R SDH P+ I D Sbjct: 773 ARQVSGVAEWHINADEPSVLDYNTDYKSAAQIAGYYAADLYRASDHDPVVIGLDL 827 >gi|163800520|ref|ZP_02194421.1| hypothetical protein 1103602000595_AND4_07554 [Vibrio sp. AND4] gi|159175963|gb|EDP60757.1| hypothetical protein AND4_07554 [Vibrio sp. AND4] Length = 321 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 94/310 (30%), Gaps = 38/310 (12%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---RQYAKNLDADIVFLQEMG 75 S ++ + N+ G ++ L + + L DI+ LQE+ Sbjct: 6 STENRITFATANLLNFVAPPGAYYDFENIYSFDDWQDKLTWTKSQFEQLSPDIIGLQEVF 65 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S F + + F S + + + A+A R V ++ D Sbjct: 66 SIQETKDFFAEIGYLYFASVDT-PHIEGDYIYSRPVVALASRFPIEHVEAVTFEQ-NTLD 123 Query: 136 S--------FSRAGNRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCSLLS 185 FSR R + + + V +HLKS D E+ P LS Sbjct: 124 VFGSMSAPPFSRKPLRAHIIHPIIGHIA---VYVMHLKSQRPADSDKPEDASKPIARWLS 180 Query: 186 QQAQWLKDWI------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 Q + + + Q + +P ++ GD N+ I N+ + + + ++ Sbjct: 181 TQQRGWEAAMLRDAMQKQYALNPMPTLLMGDMNQTITPTSVNNVLVEPYGDSVTDLQLTD 240 Query: 240 EKDSRCNAN-----KNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDI------ 285 + + +DY ++ Q Y D Sbjct: 241 GWKLQVAPSLDSRPATHYYFAKGNVLDYILLSQEFDAHADVSIAEVTDYQVLDTHLINPS 300 Query: 286 KSRGKRLSDH 295 +R K SDH Sbjct: 301 FARDKNASDH 310 >gi|149199705|ref|ZP_01876737.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] gi|149137222|gb|EDM25643.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] Length = 275 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 97/315 (30%), Gaps = 73/315 (23%) Query: 1 MIRKYVLALVF---FLVPCTASVAQK-----VRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 M +LAL F + + ++ VR+ S+N+ K++ Sbjct: 1 MNSIKLLALTFAYLCIFTSNLTASEPDKSLTVRVASYNVE---------FGKSATP---- 47 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDI 110 + + K + DI+ E + A+V + ++ D Sbjct: 48 --EQIGEMFKPYNLDIIGFDEAPDGDWTARVGKVLGMKYSFV-------GKISSANHKDK 98 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + I R R ++ + D AV + +I+G I +H+ C Sbjct: 99 YKTILSRTPLERKVEHDL----SVDRRRCWNPASAVRAVTKIDGVAIAFYSLHI---CST 151 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-------DD 223 E + L +KE+ ++ GDFN I N Sbjct: 152 RDREKIG----HAYKLVGEVL------RKETTERVIVVGDFNNNIGDAAMNTFKKAGFKA 201 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 WK + + K+ NA +N ID+ + +A + E+ Sbjct: 202 TWKDLKID-------VSKEYTYNAFDPKKNLGVIDHILCKTSAGAKVTAGGIIEL----- 249 Query: 284 DIKSRGKRLSDHCPI 298 K LSDH PI Sbjct: 250 -----KKPLSDHKPI 259 >gi|186474192|ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184196524|gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 250 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 39/200 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 TA+ + +R+ +WNI V + + + + + LDADIV LQE+ Sbjct: 13 TTAAGVRALRIATWNI-----HGTVGTDRFASP------ERIGRVIRELDADIVALQEV- 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN-DIHTAIAVRKKNVRVLQQSYPLLGAK 134 + F + + + + + + A+ + ++ L Sbjct: 61 ---PLGGSFAPSALPVLREMTGMDAIAGPTLDTPERRYGNAILSRLPICATRALDL---- 113 Query: 135 DSFSRAGNRRAVELLVEINGK--KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 SF R A+++ VE +G + V+ HL L + Q + L Sbjct: 114 -SFGTREARGALDVDVETDGPGTALRVVATHL-------GLSARERRA------QIRALI 159 Query: 193 DWITQKKESLVPFVIAGDFN 212 + +P ++ GD N Sbjct: 160 AAFDT---ARMPVLLMGDIN 176 >gi|171910959|ref|ZP_02926429.1| hypothetical protein VspiD_07285 [Verrucomicrobium spinosum DSM 4136] Length = 300 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 56/291 (19%) Query: 23 KVRLVSWN---INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSY 77 K+R+V+WN ++ ++ R+ + + L DIV QE + + Sbjct: 53 KLRVVTWNVWGLHWIT-----------PLRSER-LRKVAEEVARLKPDIVGFQEAFVEAD 100 Query: 78 NA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A +V F+S + N R + A Sbjct: 101 RAELTQALQVVGLEHSRYFHSGLVGSGLLMVSRYPVLAEGFIRYASNGRPEALQHGDWWA 160 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S G+++ + HL + + + Q L Sbjct: 161 GKGLSLCTLDLG-------EGRRLSFGNTHLHA-------RYKENRYHATQLAQTAQLIP 206 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 W+ + +E+ P + GD+N + D + + ++ Sbjct: 207 WVKKVRETGAPALWTGDWN-----NTPDGDVLSPLMEAGAWKLLSTDQP----------- 250 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ +++ + + E D SDH + +D + Sbjct: 251 --RVDHVFGSGEGWEWQVVDQGKVNGKLESDPTVPW---SDHAAVWVDVEL 296 >gi|307591319|ref|YP_003900118.1| endonuclease I [Cyanothece sp. PCC 7822] gi|306986173|gb|ADN18052.1| Endonuclease I [Cyanothece sp. PCC 7822] Length = 573 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 100/345 (28%), Gaps = 79/345 (22%) Query: 5 YVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQ-------EGVSLWKNSVKRTTS 52 VL + A +AQ ++ + ++N+ L Q + Sbjct: 11 IVLYSLAQFALAPAVLAQVKDFNQLSVATFNVENLDPQKEALAKVKDKDPDNVDDDVAKG 70 Query: 53 DYTLLRQ-YAKNLDA-DIVFLQEM--GSYNAVAKVF----------------PKNTWCIF 92 ++ L + +L A DI+ LQE+ ++ V ++ ++ Sbjct: 71 KFSALAKEIVNDLQAPDIIALQEIQDNDGAELSSVVDASVTANTLIDAIKSAGGPSY-LY 129 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 + +I A L + R + + Sbjct: 130 RDIPPEKDQEGGQPGGNIRVAF---------------LFNPARVKLQKLERFSSNVAFSD 174 Query: 153 NGKKI-----------WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + +++ HLKS +QA+ + +++ E+ Sbjct: 175 SRRPLVGEFTFNNNAITIINNHLKSKSGGAVASLGQRV------EQAKLVNQFVSDLLET 228 Query: 202 L--VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPID 258 ++ GDFN + +T+ L ++ + + N+ ID Sbjct: 229 NPTASIIVLGDFN-----DTPDSPAVQTLLG-TVLENLTEKIPLAERYSFIFKGNRELID 282 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ +N + + + R SDH P+ + Sbjct: 283 QILVSEN-----LASGGQPEIKAVHVNAGKPGRASDHDPVIASFT 322 >gi|229826178|ref|ZP_04452247.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC 49176] gi|229789048|gb|EEP25162.1| hypothetical protein GCWU000182_01550 [Abiotrophia defectiva ATCC 49176] Length = 357 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 85/249 (34%), Gaps = 67/249 (26%) Query: 20 VAQKVRLVSWNINTLSE--------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 ++ ++ +SWN+ G + + + + + LDAD++ L Sbjct: 55 FSKDIKFISWNVGYCGLGKSADFFMDGGKKVVSQTKSEVDENIDKITDKLRQLDADVILL 114 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-------KKNVRVL 124 QE+ + + S + D +D+ ++ A+ + Sbjct: 115 QEVDRKS-------------YRSYDMDEEKLIGDKFSDMISSFAINLKALFIPYPIPPIR 161 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEI--------------------NGKKIWVLDIHL 164 ++ + + R ++ + + + KK+ V+++HL Sbjct: 162 NVEAGIMSLSKLKAESAERVSLPVPFKWPERTCNLKRCLLVEKLPISGSDKKLVVINLHL 221 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKIN------Y 217 ++ DS E + Q + L D I +K+ +V+A GDFN+ + + Sbjct: 222 EA---YDSGEGKVA--------QTKALLD-IMEKEYKEGNYVVAGGDFNQSFSSADLSEF 269 Query: 218 LGNNDDFWK 226 N WK Sbjct: 270 EVGNKGLWK 278 >gi|225870288|ref|YP_002746235.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] gi|225699692|emb|CAW93409.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] Length = 926 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 94/323 (29%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + V+R + DI+ L E+ Sbjct: 556 KLSIASYNIENFSANPSST-KDEKVRRIAESF-----IYDLNAPDIIGLIEVQDNNGPTD 609 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + + ++ + + N ++I T + V + Sbjct: 610 DGTTDATQSAQRLIDAIKALGGPAYQ-YVDIAPENNADGGQPGSNIRTGFLYQPGRVSLS 668 Query: 125 QQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 + +G D + A R+++ G K+ V+ HL S Sbjct: 669 DKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWNSVRKSLAAEFIFQGHKVVVVANHLNSK 728 Query: 168 CFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +SL P + A+ L + + V+ GDFN Sbjct: 729 RGDNSLYGRVQPV--TFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 K I+ D + + S + N +D ++ +N + +++ Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFD----MVHV 837 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860 >gi|114571487|ref|YP_758167.1| exodeoxyribonuclease III [Maricaulis maris MCS10] gi|114341949|gb|ABI67229.1| exodeoxyribonuclease III [Maricaulis maris MCS10] Length = 270 Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 93/308 (30%), Gaps = 69/308 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + L SWNIN++ + L+ + + D D++ LQE+ + + Sbjct: 2 TLTLASWNINSVRLRAVP---------------LIADWVQEADPDVLCLQEI---KCLEE 43 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + +A+ K LG + R Sbjct: 44 QFPEEAF------REMGFRHFHVRGQKGMHGVAIASKYP------LEDLGDVELCPRGEA 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V + G ++ + ++ + D + +P + + ++ + + Sbjct: 92 RHQ---RVGVEGIELH--NFYIPAG--GDEPDPAINPRFAHKLEFLDRIERYFAGRASEN 144 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 V+ GDFN +I G D + + P D Sbjct: 145 AALVLVGDFNIAPYEHDVWSHKQLLKVVSHTPVEVEALERIRQAGQFSDVARELIPMDEK 204 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 I ++ N + +D+ A + ED+ ++ SD Sbjct: 205 IYTWWSYRAKDWRAANRGRR--LDHIWASPAARDRALAGGRDAFRIWEDE--RSREKPSD 260 Query: 295 HCPISIDY 302 H P+++ Sbjct: 261 HAPVALTL 268 >gi|312885260|ref|ZP_07744937.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367067|gb|EFP94642.1| hypothetical protein VIBC2010_03195 [Vibrio caribbenthicus ATCC BAA-2122] Length = 452 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 83/285 (29%), Gaps = 40/285 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ ++N+ + ++ + RT+ L Y D++ QE Sbjct: 185 TLRVATYNL-WMIP----AVSSDISARTSLMDHSLSGY------DVLAFQE--------- 224 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F +F + + D ++ V +L+ Y + S Sbjct: 225 AFSNRRNRLFDDLSEEYPYQTQVLGGDSGALYDGGVVTLSRYPILEADYLVFDHCSSTDC 284 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ V +E NG+ V + HL S F L + L I + Sbjct: 285 HADKGIVYTKIEKNGQIYHVFNTHLAS--FGTRKAKRLRRL-QLGLLRTFMLTKNIPE-- 339 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------- 252 + AGDFN N + +I + F + + N Sbjct: 340 --DEAVIYAGDFNVDKNNHFSEYQLMLSILEVEP-PTFAGYTQGTFDPSINKYAAAKYSG 396 Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N +DY + + + + D LSDH Sbjct: 397 GTNTSYLDYVFTSKRHRPATQKLNTVRLKQRVSDSTWGEWHLSDH 441 >gi|302184783|ref|ZP_07261456.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 380 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 102/321 (31%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHT--A 113 LQ + VA ++P +T ++ E + N H + T Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFIPNPHIWGSVGRKLATLSR 188 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + L L ++ + L + GK L + +++ Sbjct: 189 FHIDSGERIQLPVPDANLISRQFQPKDAL-LVSYLPLRDGGK----LAV-------INTS 236 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 237 LTTARHTGDTAQRQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEQQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W D P +S P D + + + S S Sbjct: 297 SELHELW------DKYPMIPDNAESSGIDRSKWLTHFPNDSRISGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|257484686|ref|ZP_05638727.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320323872|gb|EFW79956.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328009|gb|EFW84014.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 237 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY-NAVAKVFPK----NTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + A+ + + S + + D Sbjct: 19 LREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 78 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ ++ + +HL Sbjct: 79 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEVPY---AGRVHAVCVHL------ 128 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ L + + ++ P ++AGDFN ++ D ++ Sbjct: 129 -GLRESHRR------QQLNLLAE-LMERLPEGEPVIVAGDFN---DWRQRADAL---LEG 174 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + + K+ + P+ +D+ + + Sbjct: 175 TGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 223 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 224 HLSDHAPLAVELTL 237 >gi|315498220|ref|YP_004087024.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315416232|gb|ADU12873.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 275 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 86/302 (28%), Gaps = 62/302 (20%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----M 74 A+ +RL+S+NI + Q+ + + L D++ +QE + Sbjct: 18 SAEPLRLMSYNIRYANPQDVPPWPERGP--------RMAAQIAFLAPDVLGVQEALLPMV 69 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 +++ + + S + T R + +V Sbjct: 70 DD---LSQALG--DYDHYGVGRDDGAKSGEST-----TVFWRRDRFEKVSATTQWCGQTP 119 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 P A +F R R + L + +G+ V + H D + +C++ Sbjct: 120 DTPSKDADAAFPRTITR--LILKDKRSGQVFDVRNAHF------DHVGVKARENCAVQIL 171 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + ++ GDFN + F P + Sbjct: 172 SLPPVP---------GAHLIVLGDFNTGMG-SAPYKRFTAETSPLKDSRVASTRRFGPTG 221 Query: 247 ANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ +D+ + + GK +SDH PI D Sbjct: 222 TFNGFDIRQTDGEAIDHIFVDR---------TLMVKSFATLTDSYSGKVISDHFPIVADI 272 Query: 303 DF 304 + Sbjct: 273 EL 274 >gi|167765272|ref|ZP_02437385.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] gi|167696900|gb|EDS13479.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] Length = 287 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 105/326 (32%), Gaps = 66/326 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 M + +L L F +V C Q +V ++S+NI + ++G++ W+ R T Sbjct: 1 MKKIILLFLSFGVVSCGQVKQQVSEQARVNVMSYNIRYDNPEDGMNNWQYRKDRAA---T 57 Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 +R Y D DI+ QE+ + + P + + ++A Sbjct: 58 AIRFY----DVDILGTQEVLHNQLEDLKQRLP--EYGVIGVGREDGKVKGE------YSA 105 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLK 165 + +K +L Y P + + A R A ++ +GK+ + L+ HL Sbjct: 106 LWYKKARFELLASGYFWLSETPEIAGSRGWDGACERIASWGKLKDKISGKEYFALNTHL- 164 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 SL+ + L D +P ++ GDFN +D Sbjct: 165 ----DHIGVVARREGVSLILDRVNELSD--------GLPVIVTGDFN----AEPESDVIK 208 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESF 275 D + S + + IDY + + Sbjct: 209 HMTDAENPKHLQDTRLMSPIVYGPSWSFHDFGKIPYDKRPLIDYVFV---------RNDL 259 Query: 276 SEILYNEDDIKSRGKRLSDHCPISID 301 + Y + LSDH P+ + Sbjct: 260 KVLRYGVLAETEGSEFLSDHAPVLVT 285 >gi|21106532|gb|AAM35338.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 1131 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 516 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 572 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + ++ + + I V+ Sbjct: 573 DILGTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIA 632 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ + L +H + Sbjct: 633 GGVPRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQR 692 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 693 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 741 >gi|77748525|ref|NP_640802.2| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 1193 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENLGVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ + L +H + Sbjct: 695 GGVPRVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQAEGRTLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|114321929|ref|YP_743612.1| exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] gi|114228323|gb|ABI58122.1| Exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] Length = 258 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 97/309 (31%), Gaps = 80/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 ++L SWN+N+L R L ++ D+V LQE A Sbjct: 1 MKLASWNVNSL------------KVRLPQVLDWL----ESRQPDLVGLQETKLTDERFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + + + Y+ + + +AV R + + + P L Sbjct: 45 EALNEAGYQVAYAGQPT------------YNGVAVLARGRAPEAVIRDIPGLDDPQ---- 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + V + +++++ + + S + Y L DW+ +++ Sbjct: 89 ---RRVLGVTVGD----LRFINLYVPNGSEVGSEKYAYKLD------WLARLADWLAEER 135 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-FWK------------------TIDPNDSLIRFPKE 240 V+ GDFN + +D W+ + D+ F + Sbjct: 136 RRHDKLVVVGDFNIAPDDRDVHDPELWREKVLCSTPEREALRRLTGELGLTDTFRLFDQP 195 Query: 241 KDSRCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N RN+ ID + Y+ D +R SDH Sbjct: 196 EKVWSWWDYRMNNFKRNRGLRIDLVLASPALYQACTSSYV-------DREPRTWERPSDH 248 Query: 296 CPISIDYDF 304 P +++ Sbjct: 249 APAVAEFNL 257 >gi|301067802|ref|YP_003789825.1| metal-dependent hydrolase [Lactobacillus casei str. Zhang] gi|300440209|gb|ADK19975.1| Metal-dependent hydrolase [Lactobacillus casei str. Zhang] Length = 355 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 97/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNL---DADIVFL 71 Q +++NI S S + + K + + Y+ + K + D+ F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSKKSVRTSINGVIKTTQAQNPDVAFY 110 Query: 72 QEMGSYNAVA------KVFPKNTWC---IFYSTERLINHSKRDSNNDIHTAIAV----RK 118 QE+ + K+ I+ + T + + Sbjct: 111 QEIDPDGDRSQHVNEVKMVTGAQQQYANIYGQNYDSAYLFYPFTQPIGKTKSGILTLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSSRRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFVMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I Q + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFTKLFKYIEQAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + ID +++ N + Sbjct: 281 SKLPAGFHIPTMGLAKAAVPSVRALDQPYQPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|296274120|ref|YP_003656751.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296098294|gb|ADG94244.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 325 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 110/327 (33%), Gaps = 53/327 (16%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRT--TSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ ++N+ + K+ + + ++ K LDADI+ QE+ S + Sbjct: 3 IKFTTFNLFQFTAPPFSWYFKKDRFTKEQWEQKVSWIKDQIKLLDADIIGFQEVFSIEEL 62 Query: 81 AKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + + F S + IN A+A R + Y L K + Sbjct: 63 KELCKELGYEYFLSVDKPKINKQNPTIYKTTVLALASRFPIISNKNVRYDLASIKKHNFK 122 Query: 140 AGNRRA----VELLVEINGKKIWVLDIHLKS------------FCFLDSLENTYSPS--- 180 + ++ N KI V HLKS L + Sbjct: 123 DKFAFSRVPIKAIIELPNKTKIAVYVNHLKSNRLNEFEYIFKEGTSLKEKIEKTKVALEN 182 Query: 181 --CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----NNDDFWKTIDPNDSL 234 S L Q+ KES +P + D N K + N + + ++ ++ + Sbjct: 183 DFSSALKQRLIEASSLYMDIKESKIPTIFLCDLNDKEFSMTIDALTNKAYHEELEEDEYI 242 Query: 235 IR-------------FPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + P++K+ + ++ ID+ + + ++ S ++ Sbjct: 243 LFDSYYHCEKEIYNPHPEQKEIKRTPTSYYFSDENVIDFIFVSEQLKDKIV----SYKVF 298 Query: 281 NEDDIKSRGKRL--SDH----CPISID 301 +E K+R L SDH C I ID Sbjct: 299 DEHLQKNRNGTLLESDHAQVVCEIDID 325 >gi|294651509|ref|ZP_06728821.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292822597|gb|EFF81488.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 459 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 94/292 (32%), Gaps = 44/292 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A +++++S+NI L + +R L Y D++ +QE S + Sbjct: 190 ADEIKVLSYNIYAL-----PMVASKISERLAELPQHLNGY------DVILMQEAFSSSRT 238 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + + V R V+ + YP D F+ Sbjct: 239 GMLNQLAQQYPYQTHVPIGSGYNLFD-----SGVLVLSRYPIVKTAEMIYPDCTGTDCFA 293 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-QAQWLKDWITQ 197 G A + NGK V H + + + L Q Q Q ++ I Q Sbjct: 294 DKGVIYAEIIK---NGKAYHVTSTH--------TASFDTNEA-RALRQVQFQQIRQLINQ 341 Query: 198 KKESLVPFVIAG-DFNRK-INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---- 251 + V+ G DFN + + + D ++ + S + N Sbjct: 342 QNIPSFDAVLMGGDFNVNKLLWPQDYQDMLTNLNATAPVS--TGYTASTFDPRINKLAGA 399 Query: 252 -----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY V N + + IL + D LSDH P+ Sbjct: 400 AGSGGTTVEYLDYVVSSNNHRQPTQSRNDVRILRSAADPLFMTWDLSDHFPV 451 >gi|305665675|ref|YP_003861962.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170] gi|88710433|gb|EAR02665.1| hypothetical protein FB2170_05240 [Maribacter sp. HTCC2170] Length = 324 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 91/325 (28%), Gaps = 63/325 (19%) Query: 25 RLVSWNINTLSEQEGVS-----------LWKNSVKRTTSDYTLLRQYAKNLD-------A 66 + +N+ L + K + KR L + + Sbjct: 16 TIAFYNLENLFDTIDDPETMDDDFTPEGFKKWTPKRYKKKVYKLAKTISEIGLESANRPP 75 Query: 67 DIVFLQEMGSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +V + E+ + V + K + H I T + + Sbjct: 76 ALVGIAEVENEMVVQDLINAEPLRKTAYDYV--------HYDSPDERGIDTGLLYHRDYF 127 Query: 122 RVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE-NTYSP 179 VL + L+ +R R + + ++NG+ + V H S + Sbjct: 128 EVLFSEPITLMVYNPDGARDTTRDILYVHGKLNGEVVHVFVNHWPSRRDGEEETGYKRVE 187 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + + +++ + ++I GDFN + + + + +L + Sbjct: 188 AAKTIKFKMAQIEE-----QFENPNYIIMGDFNDN-----PDSKSIQLLLEDSNLYNPME 237 Query: 240 EKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLI-------------------QESFSEIL 279 + S + N R D ++ N + + + F Sbjct: 238 KLGSPERGSANYRRSWSLFDQIMVSHNFFNYEKGTHSFAHANIFDDNLLTEWKGKFKGTP 297 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ I + Sbjct: 298 FRTYAGRKYIGGYSDHFPVYIQLKY 322 >gi|330986335|gb|EGH84438.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 233 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 86/254 (33%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY-NAVAKVFPK----NTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ + A+ + + S + + D Sbjct: 15 LREAVRTVSADIVFLQEVHGEHQSHARSVKDWPTISQYEFLADSMWNDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ ++ + +HL Sbjct: 75 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEVPY---AGRVHAVCVHL------ 124 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ L + + ++ P ++AGDFN ++ D ++ Sbjct: 125 -GLRESHRR------QQLNLLAE-LMERLPEGEPVIVAGDFN---DWRQRADAL---LEG 170 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + + K+ + P+ +D+ + + Sbjct: 171 TGLHEVFVERFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 219 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 220 HLSDHAPLAVELTL 233 >gi|312222242|emb|CBY02182.1| similar to endonuclease/exonuclease/phosphatase family protein [Leptosphaeria maculans] Length = 327 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 92/315 (29%), Gaps = 34/315 (10%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + +F + + +R+++ NI + K +R L Y Sbjct: 8 PFFFLAIFIALAMRVNATLPIRMLTHNIRYAASVP-FIGEKPWPERKQLILNQL-HYNTL 65 Query: 64 LDAD-IVFLQEMGSYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + + + LQE+ V + + W ++ I RK Sbjct: 66 HNPEAFICLQEVLHEQLVDILAGLGDEWTHIGVGRDDGKEKGE------YSPIVYRKGVW 119 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-------KKIWVLDIHLKSFCFLDSLE 174 L S + G ++ + + I + HL +S Sbjct: 120 EPTTWQTVWLNEDGSIGKKGWDAGSVRILTVGTFRHRESKEVIVGMSTHL-----DNSGM 174 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKES-----LVPFVIAGDFNRKI---NYLGNNDDFWK 226 S ++ Q + S +PF ++GD N +I Y N+ Sbjct: 175 IARRESAKIILQTIDAVTATTNLTNSSFGVRDRLPFFLSGDLNSEIDGEAYQILNNSTAS 234 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 T D D + ++ + N + ID+ + E +S + +D Sbjct: 235 TQDAKDLAKWRYGDTNTFTDFGDNEKRFTLIDFVFVGPRGGTNWDVEGYSVLPNKFEDGV 294 Query: 287 SRGKRLSDHCPISID 301 SDH + +D Sbjct: 295 FS----SDHRAVVVD 305 >gi|253569415|ref|ZP_04846825.1| metallophosphoesterase [Bacteroides sp. 1_1_6] gi|251841434|gb|EES69515.1| metallophosphoesterase [Bacteroides sp. 1_1_6] Length = 611 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 11/76 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMGSY 77 N D+V +QE+ S Sbjct: 53 NNASPDVVAVQEVDSV 68 >gi|221198087|ref|ZP_03571133.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204354|ref|ZP_03577371.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221175211|gb|EEE07641.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221182019|gb|EEE14420.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 285 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 108/310 (34%), Gaps = 58/310 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQE--------- 73 +R++ WNI + +GV D A+ L D D++ +QE Sbjct: 1 MRVIDWNIQWGRDADGVV-----------DLRRTIAVARQLADFDVLCVQEITRGFDALP 49 Query: 74 ----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSY 128 +G + +A + P + + + + ++ + AIA R RVL+Q Sbjct: 50 GRPGVGQFAELAALLPG--YTVVEAIGADLPPAQPGTPRRQFGNAIATRLPVGRVLRQLL 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSLENTYSPSCS 182 P D+ + + R A+++ + + V+ HL + +D++ + +C+ Sbjct: 108 PWPA--DADAPSMPRVALDVELLTASGPLRVVTTHLEFYSERQRLAQVDAIRARHREACA 165 Query: 183 LLSQQAQWLKDW--ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A D +S ++ GDFN + + ++P D F + Sbjct: 166 HADRPAPAENDTGPFAATAQSRDA-ILCGDFNSAFDSTAYR----RMLEPIDGAPAFV-D 219 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-------- 292 + + + + ++ + + D + R R Sbjct: 220 AWIAQHPGRTPPPTAGVY------DTAQWSDGPLACDFAFVTDTLLPRLARCEIDGAVRA 273 Query: 293 SDHCPISIDY 302 SDH PI ++ Sbjct: 274 SDHQPIVLEL 283 >gi|110835509|ref|YP_694368.1| hypothetical protein ABO_2648 [Alcanivorax borkumensis SK2] gi|110648620|emb|CAL18096.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 300 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 59/263 (22%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + R+ + Q + D+V LQE+ + ++ + ++ + Sbjct: 72 AHPRSVETIEQIAQVLSHF--DVVGLQEVDGGSLRSR---NMNQLVHLASMAGFPVWHQQ 126 Query: 106 SNNDI------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 N ++ R + + P L R A+ + + + V Sbjct: 127 LNRNLGRFGQFSNGFLSRHQPFEITDHRLPGLPG---------RGAIVIKYGHPIQPLVV 177 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + HL + + + LS A+ L D+ V+ GDFN ++N+L Sbjct: 178 VVAHLALGEKVRN---------TQLSYLARLLADY--------KYVVVMGDFNCRLNHLD 220 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + P +L + N + ID+ ++ L + Sbjct: 221 H--------SPLAALGLQTV-RADNLNTYPSWAPDRHIDHILLSP----ELESRHTRVLS 267 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 LSDH P++ + Sbjct: 268 ---------DCLLSDHLPLATEI 281 >gi|29348219|ref|NP_811722.1| hypothetical protein BT_2810 [Bacteroides thetaiotaomicron VPI-5482] gi|29340122|gb|AAO77916.1| Metallophosphoesterase [Bacteroides thetaiotaomicron VPI-5482] Length = 611 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 11/76 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQHTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMGSY 77 N D+V +QE+ S Sbjct: 53 NNASPDVVAVQEVDSV 68 >gi|312087189|ref|XP_003145373.1| hypothetical protein LOAG_09798 [Loa loa] gi|307759462|gb|EFO18696.1| hypothetical protein LOAG_09798 [Loa loa] Length = 293 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 83/304 (27%), Gaps = 80/304 (26%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIH 111 + ++ K ++ D+V LQE+ + + W ST + Sbjct: 16 LAKIAKHIKRINPDVVALQEINDIKRLQHLITEMGKGWVTAKSTYS-------------Y 62 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 T A+ K+ +++ +S+ + V++ +E + I + +HL + Sbjct: 63 TDTAILTKH-KLINRSFHQVSHG---------MGVKIEIENTNRTINIWSLHLD---YQS 109 Query: 172 SLENTYSPSCSLLSQQAQW-----------------LKDWITQKKESL--VPFVIAGDFN 212 + Q + D+ E+ P ++ GDFN Sbjct: 110 YGPYAAFNKMVTKASQIMAGEIVDGKGRFQNMRELLVDDYFQAAIENSSIEPLIVCGDFN 169 Query: 213 R-------KINYLGNNDDFW-----------------------KTIDPNDSLIRFPKEKD 242 + D + + +D ++ Sbjct: 170 SPSHLDWTNQTSFLHGDWKFQWPATHMLQNEAGMKDSYRELHPQVLDNPGITWSTVEKMT 229 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS--EILYNEDDIKSRGKRLSDHCPISI 300 S + + IDY + + ++ +Y + SDH + Sbjct: 230 SSGWSWTIPEPQDRIDYIFYRGSLLSPIQSYTYQGNVTVYPKPFHWKNDY-PSDHFAVIT 288 Query: 301 DYDF 304 + Sbjct: 289 TFRL 292 >gi|46201082|ref|ZP_00055781.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 263 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 78/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLV+WNIN++ + LL Q A ++ DI+ LQE + Sbjct: 1 MRLVTWNINSIRLR----------------IDLLSQVASVMNPDIICLQEIKVDDP---- 40 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +FP + + + +A+ + + G D R Sbjct: 41 -LFPLDQ------CREMGFGHIAFHGMKGYNGVAILSRLPIAEWRPMSRCGRDD---RRH 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E NG +I L ++ + + E + L + + W + Sbjct: 91 LMARLE-----NGVQIHCL--YIPAGGDIPDPETNDKFA-HKLDF-VREITAWAAAEIRP 141 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN------------- 248 ++AGDFN I L N+ K + S + + A+ Sbjct: 142 EDKVILAGDFN--IAPLENDVWSHKQMLKVISHTPAEVDLLNAFLASVPFVDAMRHFVPP 199 Query: 249 -----KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + P +D+ + + S +L + + S Sbjct: 200 EDKLYTWWSYRSPDWQKNDRGRRLDHVWVTPA-----LAPSLRGMLVARE--ARAWTQPS 252 Query: 294 DHCPISIDYDF 304 DH P+ +D+D Sbjct: 253 DHVPVMVDFDL 263 >gi|281312469|sp|A8XU68|TDP2_CAEBR RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase gi|309357072|emb|CAP36193.2| hypothetical protein CBG_18823 [Caenorhabditis briggsae AF16] Length = 337 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 31/156 (19%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ ++S ++ L+SWNI+ L + + K + K ++ DI+FLQ Sbjct: 83 VMGPSSSAGFELSLMSWNIDGLDGRSLATRMK-----------AVATIVKKVNPDILFLQ 131 Query: 73 EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + K+ ++ + I+YS + +TAI V K Sbjct: 132 EVVDRDLEPIDKL--QSLYKIYYSNKGC----------QYYTAILVSKMFEVEKH----- 174 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + R + I G K+++++ HL+S Sbjct: 175 -DVVHFQNSGMYRTLQIVEGSIGGMKVFLVNTHLES 209 >gi|269125611|ref|YP_003298981.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268310569|gb|ACY96943.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 573 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 98/312 (31%), Gaps = 39/312 (12%) Query: 14 VPCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 V++ S+N +N + G ++R L K +DAD+V L Sbjct: 269 AAPGPVGPATVKVASFNTLNWFTTVGG-RGATTPLERERQ-LAKLVAALKGMDADVVGLM 326 Query: 73 EM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ AV + + + I H + IH A+ R RV Sbjct: 327 EVENNGDAAVKALVDRLNAAVGAGAYSWIRHPG-PGGDAIHVALIYRPG--RVRPVGPAR 383 Query: 131 LGAKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185 A F R R A G V+ HLKS C S + Sbjct: 384 TAADAVFERPPLAQTFRHA------GGGTPFTVIVGHLKSKRCDGASGPDADQGDGQGCY 437 Query: 186 QQAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + + VP ++ GD +N G D KT+ + + + + Sbjct: 438 NARRVRQARALAELAAAVPHPLVIGD----LNSYGREDPI-KTLAASGLAGQTERFVPAG 492 Query: 245 CNANKNLRNKI-PIDYFVMDQNAYKFLI--------QESFSEILYNEDDIKSRGKRL--- 292 + + +D+ + +++ + + YN +D R R Sbjct: 493 RRYSHVFDGQAGELDHVLAPPALARWITGVTIWHINADEPPIVDYNTEDNPPRLYRPDAY 552 Query: 293 --SDHCPISIDY 302 SDH P+ + Sbjct: 553 RSSDHDPVIVGL 564 >gi|213963771|ref|ZP_03392020.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] gi|213953547|gb|EEB64880.1| endonuclease/Exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] Length = 348 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 85/284 (29%), Gaps = 59/284 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVS-----WNINTL--SEQEGVSLWKNSVKRTTSD 53 M R L + L+ + AQ+ + +N+ L + + + +D Sbjct: 1 MKRIVTLTVSLVLLAVLNAEAQQKKFSVRTIAFYNVENLFDTINDPNKFDDDRTP-EGAD 59 Query: 54 ----------YTLLRQY-------AKNLDADIVFLQEMGSYNAVAKVFPKNT-----WCI 91 + + + DIV L E+ + V + + I Sbjct: 60 RWTSKVYNDHVQKIAKVISEIGNDVTHHAPDIVGLAEIENEAVVQDLINTEYLKRYNYGI 119 Query: 92 FYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGNRRAVELLV 150 H + + A+ +K + + ++PL KD R + + Sbjct: 120 V--------HYESPDARGVDVALIYKKGVFKPISSFAHPLHLTKDDGKPLYTRDQLLVSG 171 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIA 208 E++G+ I + H S ++ + L++Q I K + + Sbjct: 172 ELDGEMIHFIVNHWPSRLGGEAKSRPSREKAAALNKQI------IDSLLKTDPNAKVIAM 225 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 GDFN +D I+ + K+K + Sbjct: 226 GDFN--------DDP----INSGFKNVLKTKDKKEDVKPGELFN 257 >gi|152983806|ref|YP_001346537.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7] gi|150958964|gb|ABR80989.1| hypothetical protein PSPA7_1151 [Pseudomonas aeruginosa PA7] Length = 361 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 91/318 (28%), Gaps = 54/318 (16%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 52 GQALKVMTWNIQYLAGKRYIFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 111 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--------------- 115 LQE+ ++ + + + +A Sbjct: 112 LQEIDDGSSAT---DDQDQLVLIQERINDLYPCSTQAYEWKSAFVPTPHIFGSVGRKQAT 168 Query: 116 -VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS 172 R + ++ P G R A+ + G + VL+ D Sbjct: 169 LSRYRIDSAERRQLPQRDGGLFDRLFGPRPAILVSHLPIDGGGALAVLNA------RFDR 222 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------RKINYLGNN 221 L +Q + + + + + P+++ GD N + Sbjct: 223 PREQDD----TLQRQVEMTRALLDELQARRTPWLLGGDLNLLPPGQYAYLLEPLRAPYRA 278 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + ++ +E D V + + S S Sbjct: 279 DSELALLSGRYPMVPSLEEAGGVDQMRWYTHFPN--DPRVHGPDRTLDYLFHSPSLTRLE 336 Query: 282 EDDIKSRGKRLSDHCPIS 299 +S ++S+H P+S Sbjct: 337 ARVRRSDTLQISNHLPLS 354 >gi|170085645|ref|XP_001874046.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor S238N-H82] gi|164651598|gb|EDR15838.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor S238N-H82] Length = 430 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 86/294 (29%), Gaps = 64/294 (21%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + RT + ++ + D DIV LQE+ VF + + S + + HSK Sbjct: 20 AKNRTER-IQAIARFLADSDHDIVALQEI-------WVF-ADYEHVLESVSKRLPHSKFF 70 Query: 106 SNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRA----GNRRAVELLVEINGKKIWV 159 + + +A+ R V Y L G+ + G A ++ + + Sbjct: 71 YSGALGAGLAIFTRFPIVTTSVNPYSLNGSPIDVAAGDWFVGKAAASVTILHPVLGHVQI 130 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----ITQKKESLVPFVI-AGDFNR- 213 + HL + D E + + + W +T++ +VI GDFN Sbjct: 131 FNTHLFAKGGEDGPEYNRAH---------RLVNAWEFAKLTRQAAERGRYVIALGDFNSI 181 Query: 214 --KINYLGNNDDF-----WKTIDPNDSLIRFP-----------------------KEKDS 243 + D W PN K + Sbjct: 182 PPTLPMTVIRDHASLTDSWVVTHPNPDATSVTNALEAITKLGITADSPLNSYSAAKGYAA 241 Query: 244 RCNANK--NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + P + + L + +L D + SDH Sbjct: 242 GSWGKRLDYVLYRQPERHQTSPGQTFPLLKAKECKVVL--TDPVPGYNFSYSDH 293 >gi|297565545|ref|YP_003684517.1| endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM 9946] gi|296849994|gb|ADH63009.1| Endonuclease/exonuclease/phosphatase [Meiothermus silvanus DSM 9946] Length = 601 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 97/319 (30%), Gaps = 60/319 (18%) Query: 20 VAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 V +R+ S+N+ TL + + + +R L + LDADIV L E+ Sbjct: 303 VGGSLRVASYNVLNYFTTLGARGASNQAELERQR-----AKLVAALRALDADIVGLIEIQ 357 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQ 125 A+ + + + + K I+ VR + R+ Sbjct: 358 NNGDAALEDLVRALNTALGSDAYAALATGSLGTDQIKVAL---IYKPARVRPEGAFRIDD 414 Query: 126 QSY---PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYS-PS 180 P L G R +V + H KS C S T + Sbjct: 415 DPIFSRPPLAQTFRDRATGGRFSVVVN-------------HFKSKGCEGASGAETDTGQG 461 Query: 181 C--SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 C +L +QAQ L +I + + ++ GD +N D K + Sbjct: 462 CWNALRVRQAQRLLTFINDLRATDPDVLVVGD----LNAYAEEDPL-KVLTGAGLENLIL 516 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNEDDIKSRGK 290 ++ + +D+ + + + + + YN + Sbjct: 517 HISAAKRYSYVFNGESGNLDHALATSSLSSQVTGITEWHINADEPRVLDYNTEFKPDDRY 576 Query: 291 -----RLSDHCPISIDYDF 304 R SDH P+ + + Sbjct: 577 APTPFRSSDHDPLLVGLNL 595 >gi|270159123|ref|ZP_06187779.1| endonuclease/exonuclease/phosphatase family protein [Legionella longbeachae D-4968] gi|289166042|ref|YP_003456180.1| hypothetical protein LLO_2719 [Legionella longbeachae NSW150] gi|269987462|gb|EEZ93717.1| endonuclease/exonuclease/phosphatase family protein [Legionella longbeachae D-4968] gi|288859215|emb|CBJ13149.1| putative conserved hypothetical proteins [Legionella longbeachae NSW150] Length = 251 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 76/210 (36%), Gaps = 32/210 (15%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYSTERLINH--SKRDSNND 109 +R +L+ D VFLQE+ + + +P + + + ++ +K Sbjct: 30 KMRDAITSLNPDFVFLQEVQGEHIKRQKRINAWPASPQSEYIAENIWPHYVYAKNAVYQS 89 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 H A+ K ++ L + R +R + ++++ I +L +HL F Sbjct: 90 GHHGNAILSKYAFERFENINL-----THIRRASRGILHAQLKLDNVTIHLLCVHL--GLF 142 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNND 222 + C+ L Q+ I P ++AGDFN + + N + Sbjct: 143 KAE----RNVQCNTLMQR-------IKDVVPQDEPLLMAGDFNDWRTIISKPLADYLNIE 191 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + + +I+ FP + S C R Sbjct: 192 EAFVSIEGQH-ARSFPAIRPSLCIDRVYFR 220 >gi|241758932|ref|ZP_04757044.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|241320753|gb|EER56986.1| exodeoxyribonuclease III [Neisseria flavescens SK114] Length = 256 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLNVR----------------LPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAI-----ISRHEPQDVHCGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATI----NGVRVINVYCINGEALDSPKFQYKE------QWFAALTEFVRNEMAAHP 139 Query: 204 PFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + + + W + L ++ Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDGLRKIHPEGAFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + L + D +R SDH P+ Sbjct: 200 WFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTV-------DLETRAQERPSDHAPVIA 252 Query: 301 DYD 303 ++D Sbjct: 253 EFD 255 >gi|213623922|gb|AAI70402.1| Deoxyribonuclease I [Xenopus laevis] gi|213625346|gb|AAI70400.1| Deoxyribonuclease I [Xenopus laevis] gi|213626040|gb|AAI70148.1| Deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 71/322 (22%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 I+ ++E+ + ++ V K + + S H R S + + A R+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISD-----HLGRSSYREKY-AYVYRE 105 Query: 119 KNVRVLQQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 V+ + + G DSF R R V + ++ IH Sbjct: 106 DIVKPTEWYHFDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH--------- 153 Query: 173 LENTYSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 SP +++ + L W+ K+ +I GD+N +Y+ + + Sbjct: 154 ----TSPDYAIM--EVDALYDAWVDAKQRLKMENILILGDYNAACSYVASRHWPIIRLRH 207 Query: 231 NDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNE 282 + L+ ++ C D V + ++ ++ Y+ Sbjct: 208 VEELVWLIGDKEDTTVSTNTNCA----------YDRMVAGGEELQRGIVPDTAKAFNYHV 257 Query: 283 DDIKSR--GKRLSDHCPISIDY 302 + K +SDH P+ ++ Sbjct: 258 AYDLTYEMAKAVSDHYPVEVEL 279 >gi|148234330|ref|NP_001081058.1| deoxyribonuclease I [Xenopus laevis] gi|12249029|dbj|BAB20384.1| deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 71/322 (22%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 I+ ++E+ + ++ V K + + S H R S + + A R+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISD-----HLGRSSYREKY-AYVYRE 105 Query: 119 KNVRVLQQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 V+ + + G DSF R R V + ++ IH Sbjct: 106 DIVKPTEWYHFDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH--------- 153 Query: 173 LENTYSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 SP +++ + L W+ K+ +I GD+N +Y+ + + Sbjct: 154 ----TSPDYAIM--EVDALYDAWVDAKQRLKMENILILGDYNAACSYVASRHWPIIRLRH 207 Query: 231 NDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNE 282 + L+ ++ C D V + ++ ++ Y+ Sbjct: 208 VEELVWLIGDKEDTTVSTNTNCA----------YDRMVAGGEELQRGIVPDTAKAFNYHV 257 Query: 283 DDIKSR--GKRLSDHCPISIDY 302 + K +SDH P+ ++ Sbjct: 258 AYDLTYEMAKAVSDHYPVEVEL 279 >gi|262382529|ref|ZP_06075666.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295407|gb|EEY83338.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 365 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 86/268 (32%), Gaps = 56/268 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N DADIV LQE + + + + S + + S I Sbjct: 123 NKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYD-ALSMYPYRSVFYQSSTKFQSFGI 181 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV YPL ++ + + V I GKK+ +++ HL+SF Sbjct: 182 AV--------FSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLINNHLESFKLTMEDR 233 Query: 175 NTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 YS P+ + ++QA+ + + I ++ GDF Sbjct: 234 TRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIK--NAKGEYVLVCGDF 291 Query: 212 N-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N I+Y +TI + + + N+N ID + N Sbjct: 292 NDTPISYAH------RTIQGDLTDAFAESGRGMGITYNQNF-FWFRIDNILHSPN----- 339 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 340 -------MTSMNCSVDKVAY--SDHYPL 358 >gi|162452973|ref|YP_001615340.1| endonuclease/exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] gi|161163555|emb|CAN94860.1| Endonuclease/Exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] Length = 343 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 80/263 (30%), Gaps = 52/263 (19%) Query: 54 YTLLRQYAKNLDADIVFLQEM-GSYNAVAKVFPK-----NTWCIFYSTERLINHSKRDSN 107 L+ + D++ LQE S + FP +T S L+ RD Sbjct: 106 IDRLKGFVAETRPDVLALQECSASEPELNAAFPGWSVHVDTGMCLVSRHPLLKAESRDRR 165 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR--RAVELLVEINGKKIWVLDIHLK 165 + + + + P S G R + L +E + I L IH Sbjct: 166 DVWDKG---GHGAILRYEIALPDALRPSSEEPRGTRVFSLLNLHLETPREAIEAL-IH-- 219 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 + E+ + + +++ + W+ + + P V+AGDFN ++ FW Sbjct: 220 -GLWKQEAEHDRVIALR--AWESELARQWVDE---APYPVVVAGDFNMPVDSAIYRR-FW 272 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQN---AYKFLIQESFSEIL 279 + S + R + ID+ + ++ + Sbjct: 273 AGFENAFS--------RAGLGFGATKRTRWFGVRIDHVLAGPGWTTERAWIGPDLG---- 320 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 SDH PI D Sbjct: 321 -------------SDHLPIVADL 330 >gi|170740918|ref|YP_001769573.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] gi|168195192|gb|ACA17139.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 97/309 (31%), Gaps = 75/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + +R L + + D+V LQE V + Sbjct: 1 MRITTWNVN------------SIRQR----LGHLLAFLEEAKPDVVCLQE---LKCVDES 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS----R 139 FP I + A + +Q PL + Sbjct: 42 FP----------RTEIEEAGYVVATHGQKAF---NGVALLARQPLPLRELRRGLPGDPED 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQK 198 A R +E L+ + V I+L + + + + + L+ A+ L + Sbjct: 89 AQARY-IEALIPTPAANLRVASIYLPNGNPVGTPKFDDKLAFLRRLTAHARQL------R 141 Query: 199 KESLVPFVIAGDFN---RKINYLGNNDDFWKTI--------------DPNDSLIRFPKEK 241 + V+AGD+N ++ + + +R E+ Sbjct: 142 ERE-EVLVLAGDYNVIPEPVDVADPAAWLGDALFRPESRAAFRALLNEGFADALRACDER 200 Query: 242 DS-----RCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A RN I ID+ ++ A L+ S + L ++ SDH Sbjct: 201 PGLYTFWDYQAGAWPRNLGIRIDHLLLSPQALDRLVSASVQKHL-------RGLEKPSDH 253 Query: 296 CPISIDYDF 304 P++++ D Sbjct: 254 VPVTVELDL 262 >gi|327189443|gb|EGE56605.1| putative metal-dependent hydrolase protein [Rhizobium etli CNPAF512] Length = 239 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 79/258 (30%), Gaps = 49/258 (18%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---HSKRDSNND 109 D + ADIV LQE+ + ++ + H + Sbjct: 24 DPGRIASVIAEAGADIVALQEV------RRRTGGIDQAYLIASLLKMQAHFHPALSVAEE 77 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + A+ ++ PL + R A+ + V + +K+ V++ HL Sbjct: 78 QY-GDAIITALPTSAVKAGPLPSIGEQ------RGALSVEVLVGDRKLLVVNTHL----- 125 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 +LL+ W+ E +P V+ GDFN I +++ Sbjct: 126 GLRGRERIRQMTTLLN------SGWLRGAMEEPLPCVLCGDFN-AIPSSATYRLVARSLK 178 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + ++ P +D+ + + L+ + + + + Sbjct: 179 D--------AQLGGTAAPRATFPSRYPLMRLDHIFVTDD----LVVKRAAVLQNRLTKVA 226 Query: 287 SRGKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 227 ------SDHLPLFAEISF 238 >gi|119477271|ref|ZP_01617507.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] gi|119449634|gb|EAW30872.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] Length = 260 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 84/265 (31%), Gaps = 61/265 (23%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVA-----KVFPKN-TW-CIFYSTERLINHSKRDSNN 108 LR + ++AD++FLQE+ +A KV + + + + H N Sbjct: 37 QLRHSIRTVNADMMFLQEVVGEKQLADLSSKKVSGAAVEYPQFEFLADEVWPHYAYGRNA 96 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSF 167 T N + + + D R R +L+ ++V+ H Sbjct: 97 LYQTG---HHGNAILSKYPFDEWDNTDVSHWRFSQRG---ILLGKLEIGLYVICTHF--G 148 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 F +Q L D + ++ P +IAGDFN ++ G+ D + Sbjct: 149 LFGRER-----------KRQLVQLLDLVAERVPDAAPLIIAGDFN---DWSGSLDRQIRH 194 Query: 228 IDPNDSLIRFPKEKDSRCNANK---------NLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + R + ++ K RN ID V+ Sbjct: 195 RIGVQDVYREAYGRRAKTFPAKFPVFSMDRIYYRNMELIDAEVLSGM------------- 241 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 ++LSDHC + ++ Sbjct: 242 ---------PWQQLSDHCALYAEFS 257 >gi|169335183|ref|ZP_02862376.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM 17244] gi|169257921|gb|EDS71887.1| hypothetical protein ANASTE_01591 [Anaerofustis stercorihominis DSM 17244] Length = 357 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 107/328 (32%), Gaps = 73/328 (22%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDADIVFLQE 73 ++ ++++N+ ++ + + KRT + + Q KN +D+VFLQE Sbjct: 54 DELSVLTYNLGYCNDSADSDFFMDGGKRTRIESKDKVIRNMKGIEQNIKNNKSDVVFLQE 113 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRVLQQ 126 + + + + N + S + + + + V V V Sbjct: 114 VDEKS--KRAYGVNEVK-YLSDNLNGSSYFAKNFSCKYIPYPFPDMIGGVEAGIVTV--S 168 Query: 127 SYPLLGAKDSFSRAGNRRAV------------ELLVEINGKKIWVLDIHLKSFCFLDSLE 174 Y + AK + + + ++ + K++ ++++H+++ D E Sbjct: 169 PYKVSDAKRYSLPVAFKYPIRVCQMKRCLLVERVKIKNSDKELVLVNLHMEA---YDDGE 225 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI------NYLGNNDDFWK-- 226 +Q + L D++ ++ + + GDFN+ Y ND ++ Sbjct: 226 GK--------KKQTKVLTDFLNKEYKKGNYCIAGGDFNQNFPNADNKKYPIINDKYFTPG 277 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKNLRNKI--------PIDYFVMDQNAYKFLIQESFS 276 +D F + + N ID F++ N ++ Sbjct: 278 TLNLDAFSKDWTFAVDDSLPTSRLLNEEYDENSKNTQLYVIDGFILSPNVKLKKVK---- 333 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ I+ Sbjct: 334 --------TIDTKFNYSDHNPVRIEVKL 353 >gi|326436925|gb|EGD82495.1| hypothetical protein PTSG_03143 [Salpingoeca sp. ATCC 50818] Length = 548 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 78/233 (33%), Gaps = 39/233 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +++ + +R+ S+NI ++E + + L + + D D++ QE+ Sbjct: 241 PHASTLRRPLRIASYNIWNINEFDDGTY--------EERLNRLAAHVRTEDPDVIAFQEV 292 Query: 75 ------GS-YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 S ++A + P + + + +AV K V Sbjct: 293 RHDALRDSQPASLAALLPTYHYV-----YQPAMTYAEQVFGRVEEGVAVFSKYPIVGIDY 347 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L + + + A R +++ +N + + + F+ + ++Q Sbjct: 348 RLLYRNRRNHADAHQR----VVLRVNVDAPHLGPVSI----FVSHYALDET------ARQ 393 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ W K+++ + GD N + + + L+ + Sbjct: 394 RGCVETWEFIKEDNSSTQLFLGDLN-----AEPDTPCIRFLSGKAPLLEATTD 441 >gi|254883467|ref|ZP_05256177.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|319641746|ref|ZP_07996428.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] gi|254836260|gb|EET16569.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|317386633|gb|EFV67530.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] Length = 251 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 102/309 (33%), Gaps = 70/309 (22%) Query: 2 IRKYVLALVFFLVP----CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 ++K +L L+F +V +++ +R++S+NI G+ + DY + Sbjct: 5 MKKLILCLLFLIVGVELHASSAHGDSLRIMSYNI-----HNGIGMDG------KVDYARI 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 +++ D+V LQE+ S S ++ + + A+ Sbjct: 54 ANVISDVNPDVVALQELDS-------------ITHRSPVNVLEEIASVTGMNYVFGPAIS 100 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + +G R + + + +L + + + FL + + Sbjct: 101 YGGGKY------GIGVMSKEKPLNVR---NVSLPGREEARTLLVVEFEKYIFLATHFS-- 149 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSLI 235 + Q + ++ + + P +AGD N + L + ++K + + Sbjct: 150 ----LTAADQIKSIEVILKEVFSKEKPVFMAGDMNSVPSSLTQKNIRKYFKVLTDD---R 202 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 CN IDY K + + ED + SDH Sbjct: 203 WIT------CNGEC-------IDYI---YGYEKKKGKFAVRRKGRIEDHVA------SDH 240 Query: 296 CPISIDYDF 304 CP+ +D + Sbjct: 241 CPVYVDVYY 249 >gi|254452861|ref|ZP_05066298.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus 238] gi|198267267|gb|EDY91537.1| endonuclease/exonuclease/phosphatase [Octadecabacter antarcticus 238] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 97/344 (28%), Gaps = 74/344 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDAD-IVFLQEM 74 +++ ++N+ S + R + L LDAD I+ ++ Sbjct: 1 MKIATYNVEWFSNLFDNAGNLYDDDRWSGRWDVTRAQQTAALGAVFAALDADGIMVIEGP 60 Query: 75 GS---------------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 S A+ I + + + + + D D Sbjct: 61 DSHAKRDGAAALEGFAARFGLRARKAIIGYVNDTQQEILFLYDPDVLNVRHDPREDG--- 117 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A R + + +S+ AV +G ++ +H KS + Sbjct: 118 -APRFDGAIKMDLNVDAEAEDVHWSKPPLELAVT---HTSGTDFRLIGVHAKSKAPHGAK 173 Query: 174 ENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINY----------- 217 + S+ ++ Q WL+ + + ++ GDFN Sbjct: 174 TDAEVMRISIANRRKQLAQCIWLRRRVEAHLAAEDNLIVLGDFNDGPGLDEYEKLFGRSG 233 Query: 218 ------LGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQN 265 G + + + + +R + R +DY ++ Q Sbjct: 234 VEIVLGEGEGEQLFDPHARMALSQRIGAVPVT----ARFTVGPDRRFLSALLDYIMVSQG 289 Query: 266 AYK----FLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I F + + + D+ + SDH P+ +D Sbjct: 290 VRTMGAEWAIMHPFDDPKCFADKDLCAALLTASDHFPVVLDIPL 333 >gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] Length = 260 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 83/272 (30%), Gaps = 53/272 (19%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L + DI LQE+ S + ++FP+ + + +A Sbjct: 17 ALLDWLSETMPDIAMLQEIKSVD---ELFPR-------EEIEALGYQIHSHGMKGFNGVA 66 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + D +R +E V N + + +++L + + Sbjct: 67 ILSKYPLEDIMRGLPGDSDDIQTRY-----IEATVITNKGPLRLCNLYLPNGNPTPGPKF 121 Query: 176 TYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKINYLG 219 Y L ++ L PF++AGDFN YL Sbjct: 122 DYKLKWMKRLYERTCALIK-------LEEPFLLAGDFNIIPQAEDCWDTKVWESDAAYLP 174 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFLI 271 + ++ I F + S N N N I ID+F++ + LI Sbjct: 175 ESRAAYRKILNLGLTDAFRVKNKSAMNYTFWDYQAGAWNKNNGIRIDHFLLSSSCADILI 234 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + SDH P+ ++ D Sbjct: 235 DCQ-------SDRECRARDKPSDHVPVWVELD 259 >gi|53734141|gb|AAH83404.1| Ttrap protein [Danio rerio] Length = 379 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 95/280 (33%), Gaps = 48/280 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++SWN++ L +L R L Y D+VFLQE Sbjct: 132 KLSIISWNVDGL-----DTLNLADRARG------LCSYLALYTPDVVFLQE--------- 171 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + + S++ T I +RK V+ L+ Sbjct: 172 LIPA--YVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTTQM-----M 224 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +G+K++++ HL+S C S E T +Q + + I + Sbjct: 225 RNLLIAQVTFSGQKLYLMTSHLES-CKNQSQERT---------KQLRVVLQKIKE-APED 273 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + AGD N + + N W+ + + R+ + + N ++ Sbjct: 274 AIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHC-RYTWDTKANSNKTVPYVSRC 332 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + K + + + G+ SDH Sbjct: 333 RFDRIFL--RSAKTGPPVTPDHMALIGMEKLDCGRYTSDH 370 >gi|53717884|ref|YP_106870.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|67641509|ref|ZP_00440286.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|76810950|ref|YP_331843.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|121598216|ref|YP_994254.1| hypothetical protein BMASAVP1_A2960 [Burkholderia mallei SAVP1] gi|124384970|ref|YP_001028092.1| hypothetical protein BMA10229_A2128 [Burkholderia mallei NCTC 10229] gi|126442096|ref|YP_001057288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|126450081|ref|YP_001082902.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|126454198|ref|YP_001064530.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|134283629|ref|ZP_01770328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|167001495|ref|ZP_02267290.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] gi|167736660|ref|ZP_02409434.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 14] gi|167813758|ref|ZP_02445438.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 91] gi|167843867|ref|ZP_02469375.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei B7210] gi|167892369|ref|ZP_02479771.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 7894] gi|167900865|ref|ZP_02488070.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei NCTC 13177] gi|217424902|ref|ZP_03456398.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|226199751|ref|ZP_03795302.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|237810425|ref|YP_002894876.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei MSHR346] gi|242317588|ref|ZP_04816604.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254174690|ref|ZP_04881351.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|254182171|ref|ZP_04888768.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|254188101|ref|ZP_04894613.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254196318|ref|ZP_04902742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|254201867|ref|ZP_04908231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254207198|ref|ZP_04913549.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|254260281|ref|ZP_04951335.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|254295783|ref|ZP_04963240.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] gi|254359702|ref|ZP_04975973.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|52208298|emb|CAH34231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|76580403|gb|ABA49878.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|121227026|gb|ABM49544.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124292990|gb|ABN02259.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229] gi|126221589|gb|ABN85095.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|126227840|gb|ABN91380.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|126242951|gb|ABO06044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|134245038|gb|EBA45133.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|147747761|gb|EDK54837.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147752740|gb|EDK59806.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|148028916|gb|EDK86848.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|157806316|gb|EDO83486.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] gi|157935781|gb|EDO91451.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160695735|gb|EDP85705.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|169653061|gb|EDS85754.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|184212709|gb|EDU09752.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|217391922|gb|EEC31948.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|225928102|gb|EEH24138.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|237506100|gb|ACQ98418.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei MSHR346] gi|238522453|gb|EEP85897.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|242140827|gb|EES27229.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|243062702|gb|EES44888.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] gi|254218970|gb|EET08354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 54/243 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VA ++ VSWN++ G + W +R + + AD+ FLQE Sbjct: 9 LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVASTHADVYFLQE 57 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----------------V 116 A+A+ P+ + + D + T IA Sbjct: 58 -----AMARRMPRP--VLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSW 110 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R N + L G D + RR + + G + +L HL Sbjct: 111 RHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGGAPVTLLCAHL---------- 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + L +Q W+ WI + + P V+AGDFN ++ ++ + I ++ Sbjct: 161 -ALTRAARL--RQMHWIAHWIERNARTG-PLVLAGDFN---DWRNDSIPLFGEIGLSEVA 213 Query: 235 IRF 237 Sbjct: 214 TLL 216 >gi|298204349|gb|ADI61823.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 997 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 85/283 (30%), Gaps = 85/283 (30%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A + L +WN+ TL+ + +L Q AD+ LQE+ Sbjct: 23 TANEFSLCTWNVRTLNRPAA--------------FQVLCQQLTQHRADVTALQEIRWVG- 67 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V + + +YS H K T V K+ ++ L + + + R Sbjct: 68 -QGVVKRADYTAYYSC-----HPKHHLFG---TGFVVGKR-LQPLIIDFQPINERMCSIR 117 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----- 194 + ++ ++H + + W Sbjct: 118 IKGKFQNYTII----------NVHA-----------------PTEESAPEEKEKWYYDVE 150 Query: 195 -ITQKKESLVPFVIAGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPK 239 + K VI GD N KI + +ND+ + ID SL Sbjct: 151 SVYSKAPKGDVKVIIGDLNAKIGREEVYRPTIGLHSLHETSNDNGTRLIDLASSLNMA-- 208 Query: 240 EKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQ 272 S C +KN+ + ID+ ++D+ Y L+ Sbjct: 209 -IGSTCFPHKNIHKVTWFSADGVTRNQIDHILIDRRHYSNLLD 250 >gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] Length = 788 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 99/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ + D Sbjct: 769 HGRVSDHDPVLVQIDL 784 >gi|14861062|dbj|BAB62090.1| deoxyribonuclease I precursor [Bufo japonicus] Length = 353 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 101/313 (32%), Gaps = 55/313 (17%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 ++ LV C +++ S+NI + V + + +LR+Y + Sbjct: 4 VILVALVACFLQAGFSLKIASFNIE----RFAVGKVDDPTVLSLL-IQILRRY------E 52 Query: 68 IVFLQEMGSYN--AVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIA---V 116 ++ +QE+ S + A+ ++ + + S H R S + + I + Sbjct: 53 LIAVQEVMSKDNTAIIRLVQELNAATGLHYNLLISD-----HLGRSSYREKYVYIYREDI 107 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 K D F R R + + K ++ IH S + Sbjct: 108 LKPTEWYHYDDGCENCGTDVFIREPFVARFSS---LTTELKDFALVSIH-------TSPD 157 Query: 175 NTYSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + L W K+ L +I GD+N +Y+ + + Sbjct: 158 YAVR--------EVDGLYDVWEDAKQRLLLEDILILGDYNAGCSYVKTSHWPNIRLRQES 209 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSR--G 289 SL + + + P D V+ ++ +I + Y+ + Sbjct: 210 SLQWLIGDTEDSTVSTNTH---CPYDRLVVGGARFQDTVIPGTAKAFNYHVAYDLTYEMA 266 Query: 290 KRLSDHCPISIDY 302 K +SDH P+ ++ Sbjct: 267 KAVSDHYPVEMEI 279 >gi|114800068|ref|YP_759642.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114740242|gb|ABI78367.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 455 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 92/316 (29%), Gaps = 57/316 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMG-SYNAV 80 + + +WNI + + +R L A+ L A D+ LQE+ + Sbjct: 48 SIIIGTWNI---RDFDNNKFRHGPRRR-----ESLHYIAEVLSAFDVCALQEVNEDLGPL 99 Query: 81 AKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--KKNVRVLQQSYPLLGAKDS 136 V W + R+ ++ + VR ++ + LL + Sbjct: 100 KDVIRLMGPGWDFIATDVTTGASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQ 159 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F+ R + + K + +H+ + Y+ S + A+ + Sbjct: 160 FA----RTPFMVSFQAGWFKFSLCTVHIYFG-ETSKGSDGYARRVSEIDYIAREMA---D 211 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----- 251 + + +++ GDFN D+ + P++ S Sbjct: 212 RAERENENYILLGDFN----IKNPVDETMSALTKAG-FQLPPEQYPSNLLGTHYYDQIAF 266 Query: 252 ------------------RNKIPIDYF-----VMDQNAYKFLIQESFSEILYNEDDIKSR 288 + D++ V+ + +++ R Sbjct: 267 RTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVLPARHRDLKPDGRPRDTGKDKEYYSKR 326 Query: 289 --GKRLSDHCPISIDY 302 ++SDH P+ ++ Sbjct: 327 WLTWQMSDHLPLWVEL 342 >gi|145220907|ref|YP_001131585.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|315442122|ref|YP_004075001.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] gi|145213393|gb|ABP42797.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|315260425|gb|ADT97166.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] Length = 249 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 76/279 (27%), Gaps = 53/279 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + ++NI Y L AD++ QE+ Sbjct: 5 LTVSTFNI-WFDAYFA-----------DERYRALADLLAAHPADVMVFQEVTDRAL---- 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +RD T V + +L + A +R Sbjct: 49 ------DVLL----AQPWIRRDYAAAAVTGRRVGNYGMLLLSRIPLSQVTYTRLPTAAHR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ G + + +HL S + + ++Q + I + Sbjct: 99 GFLTAVLISGGTETVLCSVHLDSG--------KRNSALR--ARQFRE----IDAEFAHAD 144 Query: 204 PFVIAGDFNRK--INYLGNNDD--FWKTIDPNDSLIRFPKEKDS---RCNANKNLRNKIP 256 V+ GDFN + N W + + F ++ RC+A R Sbjct: 145 DVVLLGDFNMRDDENSRITAPWCDVWPALRAPEPG--FTEDTSINHMRCDATGKERFVRF 202 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D ++ ++ +S I SDH Sbjct: 203 -DRVLVKGEQWR---PDSVELIGTEPISPAHPRVFPSDH 237 >gi|261362084|gb|ACX71474.1| sphingomyelinase [Bacillus cereus] Length = 238 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDHFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK 214 + Q + ++D+I K +V I GD N Sbjct: 196 TDQLKEIQDFIKNKNIPNNEYVLIGGDMNVN 226 >gi|220909952|ref|YP_002485263.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] gi|219866563|gb|ACL46902.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] Length = 268 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 95/315 (30%), Gaps = 85/315 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +++ +WN+N RT L Q + L A D++ LQE Sbjct: 1 MKIATWNVN--------------SIRT-----RLVQVVEWLQANPIDVLCLQE------- 34 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA---------VRKKNVRVLQQSYPLL 131 KV + S + + + +A VR VL S + Sbjct: 35 TKVIDSD---FPRSPFLDLGYQVHCYGQKSYNGVAILSRSEPDQVRSGFATVLADSPQVE 91 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A + + AV + V+++++ + + S + Y + L Sbjct: 92 AALEFDQQKRVISAVW-------GNLRVVNLYVPNGSAIGSEKYVYKLA------WLDLL 138 Query: 192 KDWITQKKES-LVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFP------ 238 +D++ + VI GDFN + +D T +L Sbjct: 139 RDYLKTLQAQAPQDMVICGDFNIALEDRDIHDPQGRETQVMATDTERQALQAILDLGFAD 198 Query: 239 --KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ + + ID+ ++Q+ Y + + D Sbjct: 199 GFRKFTAEGGHFSWWDYRAGSFRRDRGWRIDHLYLNQSLYAKAVACTI-------DKTPR 251 Query: 288 RGKRLSDHCPISIDY 302 + SDH P+ ++ Sbjct: 252 HNPQPSDHTPVILEL 266 >gi|324521956|gb|ADY47963.1| 5'-tyrosyl-DNA phosphodiesterase [Ascaris suum] Length = 322 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 92/281 (32%), Gaps = 58/281 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAK 82 ++SWN++ L N R +T + + A+ VFLQE+ + + Sbjct: 82 TVLSWNVDGL-------DKGNLKTR----FTAICYIISKVSAEAVFLQELAPELVPELRR 130 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + I ST T I ++ + + P ++ +G Sbjct: 131 NLGG-EYSILLSTPSQP----------YFTGILLKPNVEYISHKCIP-------YANSGM 172 Query: 143 RRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RA+EL+ +I ++ +L+ HL+S + + C LK+W Sbjct: 173 GRAMELVEAKIGNMEVRLLNTHLESMKESSEIRKSQLQQCFT------QLKEW-----ND 221 Query: 202 LVPFVIA-GDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 ++ GD N + N +G + +P + D++ R Sbjct: 222 GHTLIVFGGDLNIRDNEVGELPEGFLDAWVAAGSNPKCRFTWDTRLNDNKQAGGARCRF- 280 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + SF +D I+ SDH Sbjct: 281 ---DRLFFNGGGVFSSVDFSFE----GQDRIRRTLCFPSDH 314 >gi|298386087|ref|ZP_06995644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298261315|gb|EFI04182.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 611 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 11/76 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L+ + +RL+++NI + +GV D+ + Sbjct: 4 MKKIFLLISAILLIVPVQAQRTLRLMTYNIKNATGMDGVC-----------DFQRIANVI 52 Query: 62 KNLDADIVFLQEMGSY 77 N D+V +QE+ S Sbjct: 53 NNASPDVVAVQEVDSV 68 >gi|260173107|ref|ZP_05759519.1| hypothetical protein BacD2_14655 [Bacteroides sp. D2] gi|315921383|ref|ZP_07917623.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695258|gb|EFS32093.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 361 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 97/325 (29%), Gaps = 61/325 (18%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---- 56 + +Y L L+ C + + N T + EG + + S+ Sbjct: 64 VNYRYALLPAIGLLICIPQIRTYIPF---NSTTKTIPEGSIKILSYNVMSFSNLEKKDGK 120 Query: 57 --LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + Y N +ADI+ LQE + + ++ + S + Sbjct: 121 NPILSYLANSNADIICLQEYNTA-------TNKKYLTEQDVKKALKAYPYQSIHQQGKG- 172 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-------- 166 +P+L ++ ++ ++ +N + +++ HL+S Sbjct: 173 ----DVQLACFSKFPILSIHPIEYKSNYNGSMRYVLNVNNDTLTLINNHLESNKLTKEDR 228 Query: 167 FCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNR 213 + D +++ + L Q + L + + ++ GDFN Sbjct: 229 GIYEDMIKDPNAKKVKTGLRQLIRKLTEASAIRASQADSVARVIAESKYPTTIVCGDFN- 287 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + + +D F + + + ID ++ N + Sbjct: 288 DGSISYTHRILTQELDD-----AFTQSGKGLGISYNLNKFYFRIDNILISPNLKAY---- 338 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 ---------NCTVDRSIKASDHYPI 354 >gi|239928478|ref|ZP_04685431.1| hypothetical protein SghaA1_09638 [Streptomyces ghanaensis ATCC 14672] gi|291436804|ref|ZP_06576194.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339699|gb|EFE66655.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 290 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 84/301 (27%), Gaps = 77/301 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--------- 73 +R+ ++NI G + D + ++L AD++ LQE Sbjct: 43 PLRVATYNI-----HAGAGADQVF------DLDRTARAVRDLRADVIGLQEVDVHWGARS 91 Query: 74 --MGSYNAVA-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVL 124 + A+A +VF + +R +AV R + Sbjct: 92 DFVDEARALAGKLGMRVFFAPIYD--LDPATPGGERRRF-------GVAVLSRYPVLEAE 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + E+ V + G + V HL D + + Sbjct: 143 NHEITRLSTQTPDPVPAPAPGFAEVTVAVRGAHVHVYSTHL------DYRADPSIRA--- 193 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +Q A L+ + P V+ GDFN + W+ + Sbjct: 194 -AQVADMLEVLAADRG----PKVLVGDFNAE-ATAAELAPLWRRLRDAAPGGGGT----- 242 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y +D L+ S + + + +R SDH P+ D Sbjct: 243 ---------------YPAVDPVKRIDLVTVSPDITVVGAEAVATRA---SDHRPVVADLR 284 Query: 304 F 304 Sbjct: 285 L 285 >gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 788 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 103/318 (32%), Gaps = 57/318 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GAINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVIANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQ------AQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 P +L + AQ + ++ QKK + P V+ GD N + + Sbjct: 658 GKVQP--LVLKSEEKRVQLAQEVNQFVQGIQKKNTNAPVVVLGDMN-DFEFSKPLEALQG 714 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 TI D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 715 TILK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIM 766 Query: 287 SRGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 767 KEHGRVSDHDPVLAQIDL 784 >gi|255101285|ref|ZP_05330262.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-63q42] Length = 209 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 86/253 (33%), Gaps = 73/253 (28%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 T + Y K LD D++ LQE+ + F + + ++N + N Sbjct: 20 LTKMGLYLKQLDCDVICLQEV-------------LYPQFLALKAVLNMDGVFATN----- 61 Query: 114 IAVRK-----KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 V+K S+ R A+ + ++ G+ I V++ HL Sbjct: 62 --VKKVNMIYGICTFTTSKMLNSNHFFLTSKKEQRGALCITIDAYGRIINVINTHLG--- 116 Query: 169 FLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L +Q A+ L + I + + ++ GDFN K +L +D Sbjct: 117 ---------------LDRQERAKQLDEIIDYRNRLVGIVILCGDFNEKNVFLSMFNDMAI 161 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 +++ + P + S IDY +++N L + +I Sbjct: 162 SLNKS----YLPTFEKSN----------SRIDYIFVNKN--TELKGYTVEKIY------- 198 Query: 287 SRGKRLSDHCPIS 299 LSDH P+ Sbjct: 199 -----LSDHYPVI 206 >gi|145224965|ref|YP_001135643.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|145217451|gb|ABP46855.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 91/307 (29%), Gaps = 82/307 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--- 79 ++LV++NI D LDADI+ LQE+ S A Sbjct: 6 PMKLVTFNILH-----------GRTPGAEVDLDRFVDCVAGLDADILALQEVDSIQARSG 54 Query: 80 -------VAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ- 126 A+ + + + + + +A+ + V Q Sbjct: 55 LADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQV 114 Query: 127 --------SYPLL---GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +PL K R AV + ++ V + HL + Sbjct: 115 ARLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHL------SFVPG 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L P+++ GD +N W + S Sbjct: 169 WNRYQLHHLMRDVRGL----------PSPWIVTGD----LNMPAKPARRWSRLRCLASAP 214 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 FP ++ +R +D+ + D+ A F+ Y+ ++ +SDH Sbjct: 215 TFPADRPTRQ-----------LDHVLTDEPA--------FTIRSYDTPEM-----AISDH 250 Query: 296 CPISIDY 302 P+ +D Sbjct: 251 RPLVVDL 257 >gi|126699766|ref|YP_001088663.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile 630] gi|254975745|ref|ZP_05272217.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-66c26] gi|255093132|ref|ZP_05322610.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CIP 107932] gi|255307161|ref|ZP_05351332.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile ATCC 43255] gi|255314874|ref|ZP_05356457.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-76w55] gi|255517548|ref|ZP_05385224.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-97b34] gi|255650659|ref|ZP_05397561.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-37x79] gi|260683749|ref|YP_003215034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] gi|306520587|ref|ZP_07406934.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-32g58] gi|115251203|emb|CAJ69034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile] gi|260209912|emb|CBA63862.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260213426|emb|CBE05082.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] Length = 209 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 86/253 (33%), Gaps = 73/253 (28%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 T + Y K LD D++ LQE+ + F + + ++N + N Sbjct: 20 LTKMGLYLKQLDCDVICLQEV-------------LYPQFLALKAVLNMDGVFATN----- 61 Query: 114 IAVRK-----KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 V+K S+ R A+ + ++ G+ I V++ HL Sbjct: 62 --VKKVNMIYGICTFTTSKMLNSNHFFLTSKKEQRGALCITIDAYGRIINVINTHLG--- 116 Query: 169 FLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L +Q A+ L + I + + ++ GDFN K +L +D Sbjct: 117 ---------------LDRQERAKQLDEIIDYRNRLVGIVILCGDFNEKNVFLSMFNDMAI 161 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 +++ + P + S IDY +++N L + +I Sbjct: 162 SLNKS----YLPTFEKSN----------SRIDYIFVNKN--TELKGYTVEKIY------- 198 Query: 287 SRGKRLSDHCPIS 299 LSDH P+ Sbjct: 199 -----LSDHYPVI 206 >gi|330987661|gb|EGH85764.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 380 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 105/321 (32%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + ++ DIV Sbjct: 69 GQALKVMTWNIQFLAGKRYVFWCDMADGSGPDERPTHEDLAYNLDEAARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ +E + N H + T Sbjct: 129 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKSEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 187 SRFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 238 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 239 --TARHTGDTAQKQVAATEKQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 297 SELHELWEK------YPMIPDNAESSGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|116254404|ref|YP_770242.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841] gi|115259052|emb|CAK10163.1| putative phosphatase [Rhizobium leguminosarum bv. viciae 3841] Length = 288 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 48/190 (25%) Query: 57 LRQYAKNLD-ADIVFLQEM---------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 L + A++L+ AD++ LQE+ A F + + ++ H + D Sbjct: 20 LARIARSLEGADVIALQEVTRGFSRNGFADMAADIASFFPDYFWVY--GPACDMHVEADE 77 Query: 107 NNDIHT-------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 V + V ++ L ++ R A E +++ G I V Sbjct: 78 GGLQPVRGTRFQFGNMVLSRWPIVSTRTLLLPRSRTIGKINLQRGATEAVIDAPGGAIRV 137 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL----------------- 202 +HL D + +Q ++L I + Sbjct: 138 YSVHL------DHVSADERI------RQLEFLNAHINAFVQEGGSLTGGGEFDLPEPPLP 185 Query: 203 VPFVIAGDFN 212 +VI GDFN Sbjct: 186 EDYVIMGDFN 195 >gi|317061856|ref|ZP_07926341.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] gi|313687532|gb|EFS24367.1| dnase I-like protein dhp2 precursor [Fusobacterium sp. D12] Length = 260 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 39/290 (13%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + A ++ S+N L + DY L + + D D+V L+E+ Sbjct: 1 MSLYANTGKVASFNTLHLGT-------------SKKDYKLFCETIR--DFDLVGLEEVMK 45 Query: 77 YNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGA 133 AV + + N + H+ ++ + +K V++++Q YP Sbjct: 46 KEAVENLVKELNKNTGSIWEGHISQHAVGENGYNEFYGYVWKKDKVKLIKQEGFYPDPD- 104 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R +I + H + + + L+ + D Sbjct: 105 -----NKFVREPYGATFKIGNFDFTFVLQH---AVYGKKVLERKLEAAELVK-----VYD 151 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + +IAGDFN L +D + ++ + I + ++ Sbjct: 152 YFQDRDIKENDILIAGDFN-----LSASDKAFDSLYNHRDNITCTLDPKTKTTVG-TKGL 205 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D + + +S + + K++SDH PI I+ + Sbjct: 206 SSAYDNIFISKKYTTEYTGKSG-IVDFTNKKYGEARKKISDHLPIYIEVN 254 >gi|199597635|ref|ZP_03211063.1| Metal-dependent hydrolase [Lactobacillus rhamnosus HN001] gi|258509776|ref|YP_003172527.1| metal-dependent hydrolase [Lactobacillus rhamnosus GG] gi|199591442|gb|EDY99520.1| Metal-dependent hydrolase [Lactobacillus rhamnosus HN001] gi|257149703|emb|CAR88676.1| Metal-dependent hydrolase [Lactobacillus rhamnosus GG] gi|259651040|dbj|BAI43202.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 355 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 97/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNLDA---DIVFL 71 Q +++NI S S + + K + + Y+ + K A DI F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSQQAVRKSINGVIKTTQAQKPDIAFY 110 Query: 72 QEMGSYNAVAK------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ ++ + + + + + A + Sbjct: 111 QEIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + + ID +++ N + Sbjct: 281 SKLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|226944961|ref|YP_002800034.1| exonuclease III [Azotobacter vinelandii DJ] gi|226719888|gb|ACO79059.1| exodeoxyribonuclease III [Azotobacter vinelandii DJ] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 90/316 (28%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLSALIDKHRPDVIGLQETKVADEQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + + + H +A+ R+ + V Q+ +P G Sbjct: 45 EQIGELGYHV------------HYHGQKGHYGVALLSRQPPLEV-QKGFPDDG-----ED 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + + G+ + V++ F + ++ L+ + + Sbjct: 87 SQKRFIWGVYADAAGQPVTVMN-----GYFPQGESRAHPLKFPAKTRFYADLQALLESRF 141 Query: 200 ESLVPFVIAGDFN---------------RK------INYLGNNDDFWKTIDPNDSLIRFP 238 + P + GDFN R+ ++L ++ + F Sbjct: 142 DPGQPLALMGDFNIAPEDSDIGIGAENARRWLRTGKCSFLPEEREWMARLKDWGLQDSFR 201 Query: 239 KEKDSRCNANKNLRNKI-----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + C+ + ID + + L + D Sbjct: 202 ELHPQACDRFSWFDYRSRGFEDDPRRGLRIDLILTSRALRPRLRAA-------DVDYELR 254 Query: 288 RGKRLSDHCPISIDYD 303 + SDH P+ ++ D Sbjct: 255 AMDKPSDHAPVWLELD 270 >gi|256839005|ref|ZP_05544515.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739924|gb|EEU53248.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 365 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 79/270 (29%), Gaps = 60/270 (22%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N DADIV LQE + + + + S + + S I Sbjct: 123 NKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYD-ALSMYPYRSVFYQSSTKFQSFGI 181 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV YPL ++ + + V I GKK+ +++ HL+SF Sbjct: 182 AV--------FSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLINNHLESFKLTMEDR 233 Query: 175 NTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 YS P+ + ++QA+ + I ++ GDF Sbjct: 234 TRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIK--NAKGDYVLVCGDF 291 Query: 212 NRK---INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 N + D + + ++ ID + N Sbjct: 292 NDTPISYAHRTIQGDLMDAFAESGRGMGITYNQN---------FFWFRIDNILHSPN--- 339 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 340 ---------MTSMNCSVDKVAY--SDHYPL 358 >gi|239980898|ref|ZP_04703422.1| hypothetical protein SalbJ_15743 [Streptomyces albus J1074] gi|291452759|ref|ZP_06592149.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291355708|gb|EFE82610.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 290 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 96/330 (29%), Gaps = 76/330 (23%) Query: 2 IRKYV--LALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 +R++V L L LV ++ A +R+ ++NI G + Sbjct: 7 LRRHVVPLLLAVGLVLTASATAHPATPRPVPLRVATYNI-----HAGAGEDEVF------ 55 Query: 53 DYTLLRQYAKNLDADIVFLQEMG------------SYNAVAKVFPKNTWCIFYSTERLIN 100 D + ++LDAD++ LQE+ + ++ + YS + Sbjct: 56 DLDRQVRALRSLDADVIGLQEVDVHWGERSQWRDLARELAHRLGMHVAFAPIYSLDPEPA 115 Query: 101 HSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEINGKKI 157 + +AV R +RV L + ++ V + G + Sbjct: 116 AAGPTPPRREF-GVAVLSRHPVLRVRNHEITRLSTQGENPLPEPGPGFLQATVAVRGIPL 174 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 V HL D + + + ++ + + + + ++ GDFN + + Sbjct: 175 DVYATHL------DYRPDPAVRA-AQVADMLRVMDRPCPVRCPAH---LLLGDFNARPDA 224 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---YKFLIQES 274 W T+ D + + IDY + Sbjct: 225 PELT-PLWATLRDADP--------GAPTFPASAPDRR--IDYVATSAGIGLRRAWTAPTG 273 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+ D Sbjct: 274 IA----------------SDHLPVVADLHL 287 >gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 788 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNQDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ I V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNIVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P + L + Q+K + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEDKRIQLAQEVNHFVQGIQEKNTNAPVVVLGDMN-DFEFSKPLKALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|121593606|ref|YP_985502.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] gi|120605686|gb|ABM41426.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] Length = 258 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +++ +WNIN+LS L Q L+A D + LQE V Sbjct: 1 MQIATWNINSLS-------------------VRLPQVLAWLEANPVDAIGLQE---LKLV 38 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + FP + + + + +A+ PL + Sbjct: 39 DEKFPHDAFE-------AAGYHAVCFGQKTYNGVAI--------LSRTPLRDVVRNIPGH 83 Query: 141 GNRRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G+ +A + ++ + +++ + + T S LL + L+DW+ + Sbjct: 84 GDEQARVIAATLDTPEGPLRLVNCYFVNG----QAPGTEKFSYKLLW--LEALRDWLRTE 137 Query: 199 KESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKE 240 + V+ GDFN I++ ++ + D+ F + Sbjct: 138 LAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAFRLFDQP 197 Query: 241 KDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + S + ID+ ++ S D + + SDH Sbjct: 198 EKSYSWWDYRMLGFQKNRGLRIDHILVSAALR-------PSVTACRIDRAPRKNPQPSDH 250 Query: 296 CPISIDY 302 P+ + Sbjct: 251 APVVVSL 257 >gi|229551285|ref|ZP_04440010.1| endonuclease/exonuclease/phosphatase [Lactobacillus rhamnosus LMS2-1] gi|229315244|gb|EEN81217.1| endonuclease/exonuclease/phosphatase [Lactobacillus rhamnosus LMS2-1] Length = 351 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 97/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNLDA---DIVFL 71 Q +++NI S S + + K + + Y+ + K A DI F Sbjct: 48 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSQQAVRKSINGVIKTTQAQQPDIAFY 106 Query: 72 QEMGSYNAVAK------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ ++ + + + + + A + Sbjct: 107 QEIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKA 166 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 167 KVDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAF----------T 216 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I + ++AGD+N ++ + + D+ W + P Sbjct: 217 PNVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 276 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + + ID +++ N + Sbjct: 277 SKLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYILSPNIKAESV------- 329 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 330 -----HVVSTGFQYSDHNPVVLKFQL 350 >gi|238028875|ref|YP_002913106.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] gi|237878069|gb|ACR30402.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] Length = 268 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 80/247 (32%), Gaps = 56/247 (22%) Query: 12 FLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +P + VSWN++ G + W +R++ ++ ADI Sbjct: 5 GALPFAEPRTAPNEITAVSWNLHKGRSPLGFTAW-----------NAMRRWVESTHADIY 53 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------------- 115 FLQE A+A+ P+ + ++ D + T IA Sbjct: 54 FLQE-----AMARRMPRP--VLAAGFGAPMDDPVDDVWHCQATEIARALDWQIALGPNVF 106 Query: 116 ---VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 R N + L G D + RR + + I +L HL Sbjct: 107 KPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGSAPITLLCAHL------ 160 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + L +Q W+ WI + P V+AGDFN ++ ++ + I Sbjct: 161 -----ALTRAARL--RQMTWIAHWIEHHAQEG-PLVLAGDFN---DWRNDSVPLFGEIGL 209 Query: 231 NDSLIRF 237 + Sbjct: 210 AEVATLL 216 >gi|329961023|ref|ZP_08299302.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328532309|gb|EGF59113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 348 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 106/355 (29%), Gaps = 81/355 (22%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL------ 57 ++ L L + R++ +N+ L + SL +DY L Sbjct: 7 PFLFLLSTSLHAQEQADTLTFRILGYNVENLFDYRHDSL--------KNDYEFLPGATRH 58 Query: 58 ---RQYAKNLD--------------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN 100 +Y K LD IV L E+ + + + + + I + Sbjct: 59 WNYTKYKKKLDNIARAIIAAGEWNPPAIVALCEVENDSVMRDL---TCYSILKEADYRYV 115 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKK 156 ++ I A+ ++ ++L + +R ++L +N Sbjct: 116 MTQSPDERGIDVALMYQRGCFKLLSSQSLSVEKPH----KNSRPTRDILHVCGQLLNHDS 171 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFN-- 212 + V +HL S S S LL+ Q LKD + K + +I GDFN Sbjct: 172 LDVFVVHLPSR----SGGAKESEPYRLLAAQR--LKDAVDSLYKVRNRAQILIMGDFNDY 225 Query: 213 ------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQ 264 R+I +++P+ + +R + K +D+ ++ Sbjct: 226 PANKSVRQILKAEVPSSVSGSLNPHRLYHLLAGKAAARKHFGSYKYQGEWGLLDHIIVSG 285 Query: 265 NAYKFLIQESFSEI---------------------LYNEDDIKSRGKRLSDHCPI 298 N + S E + SDH P+ Sbjct: 286 NLLQAGSPLSADEKRADVFSLPFLLTEDPNYGGKQPFRTYYGMKYQAGYSDHLPV 340 >gi|258540959|ref|YP_003175458.1| metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705] gi|257152635|emb|CAR91607.1| Metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705] Length = 355 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 97/326 (29%), Gaps = 65/326 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL------LRQYAKNLDA---DIVFL 71 Q +++NI S S + + K + + Y+ + K A DI F Sbjct: 52 GQTYTAMTYNIGYGSYPPSYSFFMDGGKYSRA-YSQQAVRKSINGVIKTTQAQQPDIAFY 110 Query: 72 QEMGSYNAVAK------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-------VRK 118 QE+ ++ + + + + + A + Sbjct: 111 QEIDPDGDRSRHVNEVEMVTNAQRQYANVYGQNYDSAYLFYPFNQPIGKAKSGILTLSKA 170 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + S P+ + NGK+ +++IH+ +F + Sbjct: 171 KVDSARRYSLPVDTDFNKIIDLDRAFTATKTTVANGKQFIMVNIHMSAF----------T 220 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI-------NYLGNNDDFWKTIDPN 231 P+ + Q L +I + ++AGD+N ++ + + D+ W + P Sbjct: 221 PNVKIQQAQFAKLFKYINHAYQQGNYVMVAGDYNHRLLKNTAEIFHTKDLDETWTHLFPK 280 Query: 232 DSLIR----FPKEKDSRCNANKN---------LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 L + + ID +++ N + Sbjct: 281 SKLPAGFYIPTMGLAAAKVPSVRALDQPYKPGKSFVTLIDGYILSPNIKAESV------- 333 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + S G + SDH P+ + + Sbjct: 334 -----HVVSTGFQYSDHNPVVLKFQL 354 >gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] Length = 786 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 99/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 487 DKLTVATYNIENFSAN--------KKETTDEKVKELA-YSIKYNLKMPDIIGVEEMQDNN 537 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 538 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPSNNQDGGAPGANIRVGFFYNPSR 596 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G +++ + R+ + G+ + V+ HL S + Sbjct: 597 VKLATVPKLLDKNVVRIGDENALFDS-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPF 655 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 656 GKVQPLVLKSEEKRIQLAQEVNYFVQGIQKKNANAPVVVLGDMN-DFEFSKPLKALEGTI 714 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D L PKE + N +D+ ++ N + + + ++ +I Sbjct: 715 LK-DMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTVVDPVHLNSNIMKE 766 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 767 HGRVSDHDPVLAQIDL 782 >gi|282877907|ref|ZP_06286716.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299908|gb|EFA92268.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 283 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 91/279 (32%), Gaps = 48/279 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++S+NI S G + + ++ + + K+ +AD+V LQE+ S + Sbjct: 42 LTVMSYNIRHCSPYIGSGVP------SPAEVGNVAKVLKDKNADVVLLQEVDSMT--TRA 93 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F + +R + + A+ K ++PL D + Sbjct: 94 FNIDQAKEL--AKRAGYKYHKFFKQKDYQGGAYGAAILSKYEMKNIINHPLPKMIDGQTI 151 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G+ + GK I++ +HL T S + + L+ + Sbjct: 152 KGSNILGSAKIVFAGKDIYIATMHL---------SVTESERLKQFPKYLECLEPY----- 197 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + +I GDFN + D ++ N + ++ + N+ DY Sbjct: 198 -AHKLIIIGGDFNSR-----PTDASITMLEANGFTR--TNKDPNKFTIPSDKPNREL-DY 248 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ + G SDH PI Sbjct: 249 IAYKPSTAVDVVSHTV-----------FTGINASDHLPI 276 >gi|108761648|ref|YP_634768.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108465528|gb|ABF90713.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 287 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 71/221 (32%), Gaps = 45/221 (20%) Query: 1 MIRKYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY 54 ++ A + T SVA ++R++++NI S R Sbjct: 12 LMGPLACATGPGYLASTESVAAVRRAPGELRVMTFNIQ-------------SGARG---L 55 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--- 111 + + D+V LQE+ + + A+ + S + + D+ Sbjct: 56 ERVAHVIRAAVPDVVALQEVDAKSTRARGLDQTE---ELSRLTGLKYRAHFRTTDLFGGA 112 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 IAV + YPL G + + R V++ +G+++ V HL F Sbjct: 113 YGIAVLSRFPLEALAQYPLPGPRGAEPRTVAHAVVDV----DGREVSVYLTHLVRRPFNS 168 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 S + L Q P V+ GD N Sbjct: 169 DTRVRQSAYVARLMAQ-------------DSRPKVLMGDLN 196 >gi|260428642|ref|ZP_05782621.1| endonuclease/exonuclease/phosphatase family protein [Citreicella sp. SE45] gi|260423134|gb|EEX16385.1| endonuclease/exonuclease/phosphatase family protein [Citreicella sp. SE45] Length = 341 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 104/345 (30%), Gaps = 68/345 (19%) Query: 24 VRLVSWNINT----------LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +RL ++NI L G S + +R + L +DAD V + E Sbjct: 1 MRLATYNIEWFDALFDDSGRLLADGGWSGRHDITRRDQA--EALGIVFTAMDADAVMIIE 58 Query: 74 ---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 GS + + T R++ + + A+ + Sbjct: 59 APDTGSRRSTVRALEAFAETYELRTRRVL--TGFVNETQQEIALLYDPAFLSARHAPLGQ 116 Query: 131 LGAKDSFSRAGNRRAVELLVEIN-------------------GKKIWVLDIHLKSFCFLD 171 + R ++L ++ G + ++ HLKS Sbjct: 117 VTGSHGSPRFDGVFRIDLDIDATEDRVVFSKPPLEIEAVTATGHVLRLIGAHLKSKAPHG 176 Query: 172 SLENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN---------RKINY 217 + + ++ QA WL+ + ++ ++ GD N Sbjct: 177 AHNRDQVMRLGIANRRKQLAQAIWLRRRVETHLQAGESVIVMGDLNDGPGLDEYEHLFGR 236 Query: 218 L--------GNNDDFWKTIDPNDSL----IRFPKEKDSRCNANKNLRN-KIPIDYFVMDQ 264 G D+ + DP+ + P+ +R R + +DY ++ Sbjct: 237 SSVEIVLGEGVVDEAMRLHDPHAAQALCNRLGPQPTTARFFLKSQGRYLQAMLDYIMVSA 296 Query: 265 NAYK----FLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I F + + + +++ SDH P++ID Sbjct: 297 DLAATRPHWRIWHPFDDPVCWRTPELREALLTASDHFPVTIDLAL 341 >gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I] gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I] gi|332380997|gb|AEE65844.1| putative endonuclease [Bordetella pertussis CS] Length = 262 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 59/273 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L+ + +AD++ LQE+ KV + H ++ + + Sbjct: 20 LQPWMTAHNADVLCLQEI-------KVSHDDLTDELRHPPGYTGHFHHAEKKG-YSGVGM 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D+ R ++ + K + V+ +L S D + T Sbjct: 72 YLRAGAERVVAGFDCEEFDAEGR---------ILRADWKDLSVISAYLPSGSSGDERQQT 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI- 235 L Q WL + + +++ FVI GD+N I + + WK N + Sbjct: 123 KY---RFLDQFGPWLDGLMAEHRKTGREFVICGDWN--IAHKEIDLKNWKGNQKNSGFLP 177 Query: 236 ----RFPK------------EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 + + D R + N+ IDY + + Sbjct: 178 EERAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERA 237 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +Y ++ R SDH P+++DYD Sbjct: 238 RATS----IYKDE-------RFSDHAPLTVDYD 259 >gi|170690563|ref|ZP_02881730.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170144998|gb|EDT13159.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 258 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 47/199 (23%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----- 74 + +R+V++NI V KR+ + + + L+AD+V LQE+ Sbjct: 30 AGEPLRIVTYNI-----HGAVGTDG---KRSAA---RIAEVIAALNADVVALQEVPLGGA 78 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S + + ++ + + + R N + + Sbjct: 79 ASIDVLREL------QDLTGMHAVPGPTLDGPDR--------RFGNAVLTNLPVLAVRTL 124 Query: 135 DS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D F R A+++ ++ + ++ HL L + Q + L + Sbjct: 125 DLSFGSREARGALDVDIDTGNGLMRIVATHL-------GLSARERRA------QVRLLLE 171 Query: 194 WITQKKESLVPFVIAGDFN 212 +P ++ GD N Sbjct: 172 AFDT---PDLPVILLGDLN 187 >gi|297192706|ref|ZP_06910104.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297151462|gb|EFH31179.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 401 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 39/197 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 A +R+++WN + R LR+ DAD++ LQE+ Sbjct: 112 GTAGSLRVLTWNTLWDRYDSD---RIATAVRRPLLIDALRE----ADADVIALQEVEPEL 164 Query: 79 AVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V + + + + + RD + + +L P+ A Sbjct: 165 LVMLLRTPWVRDAYTV------ATDPGGRDVD-----------ECGLLLLSRLPVREAGH 207 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + ++ ++VE G + V HL S D + L++ A+ L I Sbjct: 208 H-ALGPHKAVTAIVVESGGGPVTVAATHLTSDHSEDGATRRDAE----LARIAEGLAG-I 261 Query: 196 TQKKESLVPFVIAGDFN 212 V+ GDFN Sbjct: 262 DG------DVVLMGDFN 272 >gi|317051122|ref|YP_004112238.1| endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum S5] gi|316946206|gb|ADU65682.1| Endonuclease/exonuclease/phosphatase [Desulfurispirillum indicum S5] Length = 554 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 98/301 (32%), Gaps = 38/301 (12%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRT-TSDYTLLRQYAKNLDADIVFLQEMGS-YNAVA 81 +R+ ++N+ G S +R + L LDAD+V L EM + A+ Sbjct: 271 LRVATFNMENYFVTPG--RRGASNQRELQRQRSRLLAAFHGLDADVVALMEMENHPRALQ 328 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 W + S + + R + A+ + + ++ L+G Sbjct: 329 ------DWQQWVSRTQSDSREYRVIAGPDPGSDAI-QVVLVYDRKRLELMGVDSLVDGVF 381 Query: 142 NRRAVELLVEI--NGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLS--QQAQWLKDWI 195 R V + ++ V+ +H KS C + C L QQA+ L + Sbjct: 382 QRHPVVGHFRDRGSDQRFSVIGVHFKSKTRC-PAEGDVDLGQGCWNLQRTQQARMLLQQL 440 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ES F+IAGD +N G D + +SL F ++ + Sbjct: 441 GSPAES--RFLIAGD----LNAYGREDPVRLLQEAGMVNSLGAFDRQTQNYTY--IFFGQ 492 Query: 254 KIPIDYFVMDQNAYKF----------LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +DY + + F + R SDH P+ D+ Sbjct: 493 SGTLDYIFRSSALNDLARGGGIWHINVDEPPFLSYQNPQHSRSDEPWRSSDHDPVWADFA 552 Query: 304 F 304 F Sbjct: 553 F 553 >gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 788 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 97/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G + S + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDESSLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + I + +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNNIAPYTIVDPVH----LNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ + D Sbjct: 769 HGRVSDHDPVLVQIDL 784 >gi|83954036|ref|ZP_00962756.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] gi|83841073|gb|EAP80243.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] Length = 341 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 99/343 (28%), Gaps = 68/343 (19%) Query: 24 VRLVSWNINTLSEQEGVSLW---------KNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ ++N+ + ++++ R L + +DAD V + E Sbjct: 1 MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQA-QALGTVFRAMDADAVMVIEA 59 Query: 75 -------GSYNAVAK------------VFP---KNTWCIFYSTERLINHSKRDSNNDIHT 112 G+ A+ + V I + + + Sbjct: 60 PDQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLFDPDRLSATHAPGGAVGQ 119 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A R + FS+ +++ V G ++ HLKS Sbjct: 120 GDAPRFDGTLDIDLDIDAREDHVVFSKPPLE--LDI-VTREGVAFHMIGAHLKS--KAPH 174 Query: 173 LENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 T + + QA WL+ I + + P ++ GD N D F Sbjct: 175 GAKTPQDALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFG 234 Query: 226 KTIDP------NDSLIRFPKEKD------------SRCNANKNLRN-KIPIDYFVMDQN- 265 ++ D + P SR R + +DY ++ Sbjct: 235 RSSVEIVMGHRQDRALVDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPAL 294 Query: 266 ---AYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 ++ I + + + ++ SDH P++ID D Sbjct: 295 TAHRPQWRIWHPLDDPECWGDATLRDALITASDHFPVTIDLDL 337 >gi|148223007|ref|NP_001081376.1| DNase I [Xenopus laevis] gi|6683039|dbj|BAA89002.1| DNase I [Xenopus laevis] Length = 350 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 71/322 (22%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 FLVLVPMTACFLQAGFAFKIASFNIQ----RFSMTKVDDPVV-----LELLMRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 I+ ++E+ + ++ V K + + S H R S + + A R+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISD-----HLGRSSYREKY-AYVYRE 105 Query: 119 KNVRVLQQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 V+ + + G DSF R R V + ++ IH Sbjct: 106 DIVKPTEWYHFDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH--------- 153 Query: 173 LENTYSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 SP +++ + L W+ K+ +I GD+N +Y+ + + Sbjct: 154 ----TSPDYAIM--EVDALYDAWVDAKQRLKMENILILGDYNAACSYVASRHWPIIRLRH 207 Query: 231 NDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNE 282 + L+ ++ C D V + ++ ++ Y+ Sbjct: 208 VEELVWLIGDKEDTTVSTNTNCA----------YDRMVAGGEELQRGIVPDTAKAFNYHV 257 Query: 283 DDIKSR--GKRLSDHCPISIDY 302 + K +SDH P+ ++ Sbjct: 258 AYDLTYEMAKAVSDHYPVEVEL 279 >gi|330876694|gb|EGH10843.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 261 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ ADIVFLQE+ + +V + + S + + D Sbjct: 43 LREAVRSVSADIVFLQEVHGEHQSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 103 DHGNALLSKYPIIQHENL-DVSIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 152 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ QQ + L + + + P ++AGDFN ++ D ++ Sbjct: 153 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN---DWRQRAD---ASLQG 198 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + F + + K+ + P+ +D+ + + Sbjct: 199 SGLHEVFVQRFGA---PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRPWS 247 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 248 HLSDHAPLAVEVTL 261 >gi|222110327|ref|YP_002552591.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY] gi|221729771|gb|ACM32591.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY] Length = 258 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 78/307 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +++ +WNIN+LS L Q L+A D + LQE V Sbjct: 1 MQIATWNINSLS-------------------VRLPQVLAWLEANPVDAIGLQE---LKLV 38 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + FP + + + + +A+ PL + Sbjct: 39 DEKFPHDAFE-------AAGYHAVCFGQKTYNGVAI--------LSRTPLRDVVRNIPGH 83 Query: 141 GNRRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 G+ +A + ++ + +++ + + T S LL + L+DW+ + Sbjct: 84 GDEQARVIAATLDTPEGPLRLVNCYFVNG----QAPGTEKFSYKLLW--LEALRDWLRTE 137 Query: 199 KESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKE 240 + V+ GDFN I++ ++ + D+ F + Sbjct: 138 LAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHFQDLLGLGLTDAFRLFDQP 197 Query: 241 KDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + S + ID+ ++ S D + + SDH Sbjct: 198 EKSYSWWDYRMLGFQKNRGLRIDHILVSTALR-------PSVTACRIDRAPRKNPQPSDH 250 Query: 296 CPISIDY 302 P+ + Sbjct: 251 APVVVSL 257 >gi|171321352|ref|ZP_02910309.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171093370|gb|EDT38560.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 286 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 42/303 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WN+ + +GV T + L ++ D++ LQE+ Sbjct: 1 MRLIDWNVQWGRDADGVVDLAG----TIAAGRRLGEF------DVLCLQEVTRGFGALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + I + + + + AIA R RVL+Q P Sbjct: 51 QPGPDQFTELAALLPG--YTIVEAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------LDSLENTYSPSCSL 183 D+ + R A+++ + + ++ HL+ + +D+L + +C+ Sbjct: 109 WPA--DAGGPSMPRVALDVELTTPSGALRIVTTHLEYYSARQRLAQVDALRARHREACAH 166 Query: 184 LSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + Q ++ + P +I GDFN + ++P F Sbjct: 167 -ADQPAPAENATGPFTATGQPRDAIICGDFNSAFGSEAYR----RLLEPIADAPSFVDAW 221 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +R N D + + + + + R SDH P+ + Sbjct: 222 VARHPGNTPPPTAGVYDTVQWSEGPLACDFVFVTATLLPRVTRCEIDGDVRASDHQPVVL 281 Query: 301 DYD 303 + + Sbjct: 282 ELE 284 >gi|307720642|ref|YP_003891782.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] gi|306978735|gb|ADN08770.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] Length = 338 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 40/204 (19%) Query: 23 KVRLVSWNINTL-SEQEGVSLWKNSVKRTTSD---------YTLLRQYAKNLDADIVFLQ 72 +++ ++N+ L Q +K + T S+ + + K+++ DI+ LQ Sbjct: 19 TLKIATYNVENLFDLQRNGHEYKEYIPYTKSNWNDTNYKVKLKNIAKVIKDMNPDIIGLQ 78 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPL 130 E+ S A+ + + + KR+S + IA R + P Sbjct: 79 EIESLQALKDL----RYAL-----------KRESIYYQYYKIANLKRTTVKVAILSKIPF 123 Query: 131 LGAKDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + + R +E +IN + ++VL H KS E+ S L ++ Sbjct: 124 VYTHEIAVTSSYRYRNILEAKFKINNEDLYVLVNHWKS---KAGPESMRIVSAKKLKKRM 180 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 Q L + GD N Sbjct: 181 QELGA--------KKNIIALGDLN 196 >gi|288574340|ref|ZP_06392697.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570081|gb|EFC91638.1| hypothetical protein Dpep_1612 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 284 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 73/212 (34%), Gaps = 17/212 (8%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + + ++ A + + + ++N+ S R+ +LL Q + Sbjct: 7 IAVTIGIMVLLILAEPSWSLTIATFNMEYFSISG-----PRGYSRSER--SLLAQKIEAS 59 Query: 65 DADIVFLQEMGSYNAVAKVFPKN--TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A+IV LQE+ + ++ W + + + I + +R Sbjct: 60 GAEIVALQEIEGDETMRTFVSEDLPGW-----SYGGNDTQGKQDLYFIWKSDKIRSIKPL 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLENTYSPS 180 + + K S + R +E E + +++HL+ + + + Sbjct: 115 RPRMVEERINWKGSIHKLFQRPPLEGTFEEISTETTFSAINVHLRGLSTRGNGNRLDAVA 174 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + +QAQ L + ++ P I GDFN Sbjct: 175 ANNGIRQAQILSLGVLS-EKHDDPLFILGDFN 205 >gi|116251798|ref|YP_767636.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] gi|115256446|emb|CAK07530.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] Length = 263 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 74/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ + DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSNPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + +A+ K + + + P + Sbjct: 38 VDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKSSPFEVNRGLPGDPLDEQ-----A 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + V I+L + +++ + Y + + L+ + ++ Sbjct: 90 RFLEAAFTLSDMRILRVCCIYLPNGNPVETEKYPYKLA------WMERLQTFAAERLAYE 143 Query: 203 VPFVIAGDFN-----RKI--NYLGNNDDFW----------KTIDPNDSLIRFPKEKD--- 242 ++AGD+N + ND + +R + Sbjct: 144 EMLILAGDYNVIPEPHDCFDPRVWENDALFLPQTREAFRRLENLGLTDAVRATTDATQFY 203 Query: 243 ------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N I ID+ ++ A + + + + ++ SDH Sbjct: 204 SFWDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDHV 253 Query: 297 PISIDYDF 304 P+ +DF Sbjct: 254 PVIAYFDF 261 >gi|261362108|gb|ACX71488.1| sphingomyelinase [Bacillus thuringiensis] Length = 225 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 25/209 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 ASTNQNDTLKVMTHNVYMLSTN----LYPNWGQTERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFN 212 + Q + ++D+I K +V I GD N Sbjct: 196 TNQLKEIQDFIKNKNIPNXEYVLIGGDMN 224 >gi|261381264|ref|ZP_05985837.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] gi|284795738|gb|EFC51085.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] Length = 256 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ + + ADI+ LQE Sbjct: 1 MKIATWNVNSLNVR----------------LPQVQNWLADHQADILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ S + +A+ + + + R Sbjct: 35 LKLDQDKFPAAALQMMGWHCVWSGQKTYNGVAI-----ISRYEPQDVHCGLPALPDDPQR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 R + + + V++++ + LDS + Y Q L +++ + + Sbjct: 90 RVIAATI----NGVRVINVYCVNGEALDSPKFQYKE------QWFAALTEFVRTEMAAHP 139 Query: 204 PFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + + + W + L ++ Sbjct: 140 KLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRKIHPEDAFYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + L + D +R SDH P+ Sbjct: 200 WFDYRGGMFQRKLGLRIDHILTSPELAATLTDVTV-------DLETRAQERPSDHAPVIA 252 Query: 301 DYD 303 ++D Sbjct: 253 EFD 255 >gi|150010182|ref|YP_001304925.1| hypothetical protein BDI_3605 [Parabacteroides distasonis ATCC 8503] gi|255012556|ref|ZP_05284682.1| hypothetical protein B2_01514 [Bacteroides sp. 2_1_7] gi|149938606|gb|ABR45303.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 365 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 85/268 (31%), Gaps = 56/268 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N DADIV LQE + + + + S + + S I Sbjct: 123 NKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYD-ALSMYPYRSVFYQSSTKFQSFGI 181 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV YPL ++ + + V I GKK+ +++ HL+SF Sbjct: 182 AV--------FSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLINNHLESFKLTMEDR 233 Query: 175 NTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 YS P+ + ++QA+ + I ++ GDF Sbjct: 234 TRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIK--NAKGDYVLVCGDF 291 Query: 212 N-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N I+Y +TI + + + N+N ID + N Sbjct: 292 NDTPISYAH------RTIQGDLTDAFAESGRGMGITYNQNF-FWFRIDNILHSPN----- 339 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 340 -------MTSMNCSVDKVAY--SDHYPL 358 >gi|149246876|ref|XP_001527863.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447817|gb|EDK42205.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 461 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 109/333 (32%), Gaps = 61/333 (18%) Query: 25 RLVSWNI---NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYN 78 ++S+N+ + + SL + + + + L+ + K ++ DI+ QEM Sbjct: 135 SVMSYNLLLRHYMWPHVYQSLPQEYLDWDSYRFPLINKTIKQMNCDIMCFQEMEYFLYKK 194 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG------ 132 +K+FP + + F+ + IN S+ D I + K +VL + Sbjct: 195 FWSKLFPTSEYESFFIQKSSINQSRSSEKIDG-VGIFINTKRFQVLDERKINFAKLVMKH 253 Query: 133 ------AKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 KD SR R V L++++ K ++V + HL S + Sbjct: 254 QTKFQFTKDFVSRLLPRNTVALILKLHDKYTDKIVYVTNTHL-----YWSPQFNDVKVLQ 308 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN-------------YLGNNDDFWKTID 229 LK++I + + GD N N + K Sbjct: 309 T-KLLLAELKNYIKE-NYKDASVIFLGDLNSNFNSDVYRLLSEGLVDFTTAKSFSGKNYG 366 Query: 230 PNDSLIRFPKEKDSRCNANKNLR----------------NKIPIDYFVMDQNAYKFLIQE 273 ++LI + S N + + +D+ + +N + + Sbjct: 367 LGNALIDHNGKIQSPFNLSSAYQTLKDTNMLNFTSFAPSFADVLDHIFVSENIHVHKVIS 426 Query: 274 SFSEILYNEDDIKSR--GKRLSDHCPISIDYDF 304 ++ + SDH PI+ + + Sbjct: 427 GVDNDYCKNLPVRGFPNDQFPSDHIPIAAEVSY 459 >gi|71737390|ref|YP_276477.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557943|gb|AAZ37154.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 363 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 105/321 (32%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 52 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 111 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ E + N H + T Sbjct: 112 LQGVDDGAKNSDYEDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGSVGRKLAT--L 169 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 170 SRFHIDSAERVQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 221 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 222 --TARHTGDTAQKQVVATEKQLDKLESCGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 279 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ + W+ P +S P D + + + S S Sbjct: 280 SELHELWEK------YPMIPDNAESGGIDRGKWLTHFPNDSRINGPDRTVDYLFYSPSLK 333 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 334 RVSARVRRDDTLLISDHLPVI 354 >gi|329770087|ref|ZP_08261482.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325] gi|328837398|gb|EGF87028.1| hypothetical protein HMPREF0433_01246 [Gemella sanguinis M325] Length = 356 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 105/313 (33%), Gaps = 57/313 (18%) Query: 29 WNI--------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76 WNI G + + + Q K+ +ADI LQE+ Sbjct: 63 WNIGYAGLDKDEDFFMDGGKMVLPLDKAHVEENIKNIAQIIKDENADITLLQEVDEDSKR 122 Query: 77 ------YNAVAKVFPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 + + K N + + N+ I+T A + R + Sbjct: 123 SYNINQVSYLDKELGLNSILAYNFKVKYIPYPWPTLGKVNSGIYT--ATKHNVDRAERYQ 180 Query: 128 YP-LLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + + +V VE + K++ +++ H + EN + Sbjct: 181 MPIPFTFPEKLANLKRGFSVIYSKVENSDKQLVIINAHFDA----YDKENKGKIA----- 231 Query: 186 QQAQWLKDWITQKKESLVPFVIAG-DFNRKINYLGNN------DDFW------KTIDPND 232 Q + L +++ QK+ +V+ G DFN+ + L +D W K++ P Sbjct: 232 -QTKQLVEFV-QKEYKKGNYVLVGADFNQSLKTLSKEEINKVPEDLWRAENFDKSLIPEG 289 Query: 233 -SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 L+ + +R N + F++D +++ ++ + + + R Sbjct: 290 FKLVYDESKNSARLNNKPYVSGSEGTYGFIIDG----YMVSDNIEVV---SVETLGQDYR 342 Query: 292 LSDHCPISIDYDF 304 SDH P+ + Y Sbjct: 343 YSDHNPVRLKYKL 355 >gi|283458671|ref|YP_003363306.1| exonuclease III [Rothia mucilaginosa DY-18] gi|283134721|dbj|BAI65486.1| exonuclease III [Rothia mucilaginosa DY-18] Length = 291 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 79/279 (28%), Gaps = 57/279 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + + D DI+ LQE+ + +A+ + + ++ W I ++ + Sbjct: 33 MAAWLASRDIDILCLQEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATR------ 86 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 R N + + + R V NGK + V+ ++ S Sbjct: 87 -RTPNSAGEVLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLTVVSAYVHSGEVGT 145 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223 ++ + + L +I GD N L + Sbjct: 146 QKQDDKYRFLERMLVRMPELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAG 198 Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMD 263 F+ I D + + IDY Sbjct: 199 FLPEERAYFDRFFGDIGYRDVARELAGQVPG---PYTWWSYRGKAFDNDAGWRIDY---- 251 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 A L + + ++ D S +R SDH P+ +DY Sbjct: 252 HMATPALAESAVEAVV---DRAASYDERFSDHAPLVVDY 287 >gi|195977910|ref|YP_002123154.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974615|gb|ACG62141.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 926 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 96/323 (29%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + V+R + DI+ L E+ Sbjct: 556 KLSIASYNIENFSANPSST-KDEKVRRIAESF-----IYDLNAPDIIGLIEVQDNNGPTD 609 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + + ++ T+ + N ++I T + + V + Sbjct: 610 DGTTDATQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPERVSLS 668 Query: 125 QQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 + +G D + A R+++ G K+ V+ HL S Sbjct: 669 DKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANHLNSK 728 Query: 168 CFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +SL P + A+ L + + V+ GDFN Sbjct: 729 RGDNSLYGRVQPV--TFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 K I+ D + + S + N +D ++ +N + +++ Sbjct: 786 ----KLIEEGDMANLVSRHELSDRYSYFYRGNNQTLDNMLVSRNLLGRYEFD----MVHV 837 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860 >gi|330818610|ref|YP_004362315.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] gi|327371003|gb|AEA62359.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] Length = 268 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 82/247 (33%), Gaps = 58/247 (23%) Query: 13 LVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 +P A A + VSWN++ G + W +R++ ++ ADI F Sbjct: 6 ALPFAAPQAAPNEITAVSWNLHKGRSPLGFTAW-----------NAMRRWVESTHADIYF 54 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIA-------------- 115 LQE A+AK P+ + S D + T IA Sbjct: 55 LQE-----AMAKRMPRP---MLASGFGAPMEDPVDDIWHCQATEIARALDWQIALGPNVF 106 Query: 116 ---VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 R N + L G D + RR + + I +L HL Sbjct: 107 KPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGAAPITLLCAHL------ 160 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + L +Q W+ WI + P V+AGDFN ++ ++ + I Sbjct: 161 -----ALTRAARL--RQMTWIAHWIEHHAQDG-PLVLAGDFN---DWRNDSVPLFGEIGL 209 Query: 231 NDSLIRF 237 ++ Sbjct: 210 SEVATLL 216 >gi|254498807|ref|ZP_05111518.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254351971|gb|EET10795.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 265 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 98/306 (32%), Gaps = 78/306 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVAK 82 +L SWN+N+L + + + + D++ LQE N A Sbjct: 10 KLASWNVNSLKIR----------------LDQVLAWMETSQMDVLALQETKLLDENFPAA 53 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAG 141 F + + I YS ++ + +A+ + P L Sbjct: 54 AFIEKGYHIVYSGQKT------------YNGVAIISRYPITDVMTDVPDLADPQ------ 95 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + V I ++D+++ + L S + Y Q + +I Q+ Sbjct: 96 -RRILAVTV----AGIRLIDLYVPNGSELTSDKYQYK------LHWLQKVTAFIQQQMSI 144 Query: 202 LVPFVIAGDFNRKINYLGNNDDF-WK-----------------TIDPNDSLIRFPKEKDS 243 + GDFN +D W+ + DS F + + S Sbjct: 145 YPKVAVVGDFNIAPEDRDVHDPLEWQDSVLVSPPEREAFAALLQLGLYDSFRNFVQAEQS 204 Query: 244 RCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A RN+ ID+ ++ Q Q D + +R SDH P+ Sbjct: 205 FSWWDYRAAGFRRNRGLRIDHVLLSQELNVLCRQSCI-------DVEPRKTERPSDHAPV 257 Query: 299 SIDYDF 304 ++ + Sbjct: 258 WVELEL 263 >gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822] gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50] gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis] gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50] Length = 262 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 88/273 (32%), Gaps = 59/273 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L+ + +AD++ LQE+ KV + H ++ + + Sbjct: 20 LQPWMTAHNADVLCLQEI-------KVSHDDLTDELRHPPGYTGHFHHAEKKG-YSGVGM 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + D+ R ++ + K + V+ +L S D + Sbjct: 72 YLRAGAERVVAGFDCEEFDAEGR---------ILRADWKDLSVISAYLPSGSSGDERQQA 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI- 235 L Q WL + + +++ FVI GD+N I + + WK N + Sbjct: 123 KY---RFLDQFGPWLDGLMAEHRKTGREFVICGDWN--IAHKEIDLKNWKGNQKNSGFLP 177 Query: 236 ----RFPK------------EKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFL 270 + + D R + N+ IDY + + Sbjct: 178 EERAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERA 237 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +Y ++ R SDH P+++DYD Sbjct: 238 RATS----IYKDE-------RFSDHAPLTVDYD 259 >gi|302556768|ref|ZP_07309110.1| secreted protein [Streptomyces griseoflavus Tu4000] gi|302474386|gb|EFL37479.1| secreted protein [Streptomyces griseoflavus Tu4000] Length = 295 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 85/292 (29%), Gaps = 61/292 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------S 76 +R+ ++NI + RT + LR AD++ LQE+ S Sbjct: 48 PLRVATYNI----HAGAGEDQVFDLDRTAAAIRGLR-------ADVIGLQEVDVHWGARS 96 Query: 77 YNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLG 132 A + + +F++ ++ + D + +AV R + L Sbjct: 97 DFADEARALADRLGMRVFFAPIYDLDPATADGERRQY-GVAVLSRHPVLAAENHEITRLS 155 Query: 133 AKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + S E++V + G ++ V HL + PS SQ A L Sbjct: 156 TQSSDPVPAPAPGFAEVVVGVRGARVHVYTTHL---------DYRADPSVRE-SQVADML 205 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + T + P V+ GDFN + W + Sbjct: 206 EVLATDRG----PKVLVGDFNAE-ATAPELSPLWGRLRDAAPAAGPTYPAAEPVK----- 255 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID + D ++ SDH P+ D Sbjct: 256 ----RIDLITVSPGI--------------GVRDARTVATEASDHRPVVADLT 289 >gi|153876175|ref|ZP_02003628.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] gi|152067361|gb|EDN66372.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] Length = 253 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 46/191 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + L + N DI+ LQE+ KV Sbjct: 2 LKIATWNVNSLRVR----------------LPHLLDWLSNHQPDIIALQEI-------KV 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + +A+ RK ++ +P Sbjct: 39 MDE---QFPLAEIEAAGYHALFAGQKTYNGVALLSRKPGNDII-TDFPDF-------NDP 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + K+ +L++++ + +DS + Y + L+++I + Sbjct: 88 QRRFLGATYD----KLRILNVYVPNGASVDSDKYQYK------LEWLTQLQNYICDNLKQ 137 Query: 202 LVPFVIAGDFN 212 ++ GDFN Sbjct: 138 YPRLIVLGDFN 148 >gi|110633851|ref|YP_674059.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110284835|gb|ABG62894.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 370 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 51/373 (13%), Positives = 105/373 (28%), Gaps = 96/373 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDYTLL--RQYAKNLD----- 65 VR+ ++N+ L + S ++N + + +Y L + + D Sbjct: 2 SVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQL 61 Query: 66 ---------ADIVFLQEMGSYNA--------VAKVFPKNTWCIFYSTERLINHSKRDSNN 108 ADI+ LQE+ + A + K+ + S Sbjct: 62 TALAIAATRADILCLQEVDNQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMM 121 Query: 109 DIHTA------IAVRKKNVRVLQQSY----PLLGAKDSFSRAG--NRRAVELLVEINGKK 156 TA + + + P L R +E+ V + GK Sbjct: 122 RRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGKP 181 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + + +H K+ + + + S + +A ++ I + + ++I GD N Sbjct: 182 LTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDLN 241 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA------------------------- 247 + R +E S N Sbjct: 242 -----DYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHT 296 Query: 248 -NKNLRNKIPIDYFVMDQNAYKF---------LIQESFSEILYNEDDIKSR------GKR 291 R+ +DY ++ + + + I +++ + Sbjct: 297 RGPEERHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPK 356 Query: 292 LSDHCPISIDYDF 304 SDHCP++I D Sbjct: 357 ASDHCPVAISLDL 369 >gi|332299279|ref|YP_004441200.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] gi|332176342|gb|AEE12032.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] Length = 360 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 104/357 (29%), Gaps = 71/357 (19%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTT 51 R +VL + Q+ +VS+N+ L + + W + + +R Sbjct: 20 RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79 Query: 52 SDYTLLRQYAKNLDA-DI---VFLQEMGSYNAVAKVF------PKNTWCIFYS-TERLIN 100 L + + A DI + LQE+ S A+ ++ N I + ++R + Sbjct: 80 RKCHQLAEVISHATAWDIPALIALQEVESVEALEQLAHHTLLRGGNYKTICATGSDRRGS 139 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIWV 159 H + D AV + +PL D + L + + + Sbjct: 140 HVALLYDADR---FAVEHT------EEWPLRITPDSIYPTRNLLFVSGRL--PSAAPLSL 188 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 + HL S + E + +L + L + V+ GDFN Sbjct: 189 IVCHLPSRRGGATAEAARAALIEMLRIRTDSL-----LRANPEQSIVVVGDFNATPEDGL 243 Query: 220 NNDD---FWKTIDPNDSLIR------FPKEKDSRCNANKNLR--NKIPIDYFVMD----- 263 + + + +DSL F E+ ID + Sbjct: 244 TDSWAVSYHAYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLLA 303 Query: 264 QNAYKFLIQESFSEILYNEDDI----------------KSRGKRLSDHCPISIDYDF 304 Y L E+ L + + S SDH P+ + Sbjct: 304 DTRYPRLELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATLLY 360 >gi|268316715|ref|YP_003290434.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262334249|gb|ACY48046.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 370 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 24/116 (20%) Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + L+ WI Q++ +P +++GDFN + F+ + + Sbjct: 258 QVRQLRAWIDQEE---LPVILSGDFN-----STPDQWFYGWLSRGLQAAGRLGGIAAPSW 309 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ ++ ++ + LSDH P+ Sbjct: 310 PAGRPLVR--IDHVLVS---REWEVLGGA-----------VPAAGLSDHRPVIARL 349 >gi|206598220|gb|ACI16023.1| RNA-editing complex protein mp100 [Bodo saltans] Length = 755 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 43/203 (21%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++ +SWN+ + S + + Y +L + + DAD++ +QE+ Sbjct: 481 TIKFLSWNVMFDRYSGKPTPLGMPGIDWCSPQRYPVLSKVMERSDADVIGMQEVEPAFWA 540 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVR--VLQQSYPLL 131 F + + + + S N AI V K+ V + + P Sbjct: 541 -----------FLADQPWVKANYMFSCNKSGPAINPWGVLMMVHKRLVVDQLTHHNVPAW 589 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S L +++NGK + V IHL + S Q L Sbjct: 590 AGHVSLLP-------VLTIKVNGKPLHVAAIHLIA------PFTKGRESART--GQDSAL 634 Query: 192 KDWITQKKESLV--PFVIAGDFN 212 Q+ + V GDFN Sbjct: 635 ----RQRLTKSISGDCVTMGDFN 653 >gi|158522340|ref|YP_001530210.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158511166|gb|ABW68133.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 248 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 90/291 (30%), Gaps = 61/291 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV-----KRTTSDYTLLRQYAKNLDADIVFLQEMG---- 75 R + +NI + G ++T + + + ++ D D+V L E+ Sbjct: 5 RFLLYNIRYGTGSGGWRFHAPVPFSGYFRKTQKAFPEIASFIRSCDPDMVGLVEVDGGSG 64 Query: 76 ---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 N +V + + + T+ + R AV + +LG Sbjct: 65 RHNGINQARQVAEELGYHCVFQTKYKPSPFSRAIPIMGKQGNAV--------LARHDILG 116 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + G +R L++E+ + + + +HL QQ L Sbjct: 117 HRYHYFEKGIKR---LIIEVELEDVVLFLVHL------SLHPGHRQ-------QQLAELG 160 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 I P ++ GDFN + G+ + S + + R Sbjct: 161 LLIR---GVGKPVIVGGDFN---AFAGSR-----ELAGFLSATGLVSANAANVRTFPSKR 209 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + +DY + +D+ + R SDH P+ D+ Sbjct: 210 PRWELDYIFHSRQVR--------------VNDMHAPSVRFSDHLPLVCDFT 246 >gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 258 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 106/292 (36%), Gaps = 48/292 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N L + +R + ++ +Y + DI+ QE A K+ Sbjct: 1 MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVMNKY----NCDIIGTQE-----ATEKM 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + I T +I + + I + KK+ + +++ L + + R+ Sbjct: 49 FKDISDNI--ETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106 Query: 144 R------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 ++ N K+I + + HL FL Y + + L ++I Sbjct: 107 SMFPRICTTAIVELKNSKRIRICNSHLD---FLLPQARAY---------ELKKLSEFIKK 154 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-- 254 ++++ +P +I GDFN N D F N L+ +K N K Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKD-FINGDVLNKRLVAVQDKKKDLYNNATMGNFKNK 213 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + YN + GK SDH P+ + + Sbjct: 214 EKGSHIDYIFVSEEFEII----DVEIVKYNVN-----GKYPSDHYPLMAEIN 256 >gi|170102771|ref|XP_001882601.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642498|gb|EDR06754.1| predicted protein [Laccaria bicolor S238N-H82] Length = 650 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 101/339 (29%), Gaps = 81/339 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +R+++WNIN + W +L+ADI+ QEM S Sbjct: 1 MRILTWNINGVRTLPQYHPWNTLKAHDD--------ILNHLEADIICFQEMKSSRPALPK 52 Query: 82 KVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVR--KKNVRVLQQSYPLLGAK---- 134 +V ++ F+S R +S + I ++ + VLQ PL A+ Sbjct: 53 QVAVPPSYDSFFSFPIRKSGYSGVATYTRHSAVIPLKAEEGLSGVLQPKPPLTAAERISD 112 Query: 135 -DSFSRAGNRRAV-----ELLVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSCSLLS 185 D++ ++ ++ G+ + + L + + +C D + Sbjct: 113 SDNYPPNAETASIEGDLDYADLDSEGRTVILDLGLFVLINVYCPNDGNGTEERDKYKMDF 172 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLI--- 235 + L+ + + ++ GD N +L + + + Sbjct: 173 H--RLLEMRVVGLIKEGREVMVVGDLNACAAIIDHCEGHLMVAKGLAEGLQGEEGFWGKD 230 Query: 236 ----------------------------RFPKEKDSRCNANK----NLRNKIPIDYFVMD 263 ++ C K + IDY ++ Sbjct: 231 SRRWMRGFLVPEDEGMPGGFMIDIVRKLWPERKGMYTCWNTKISARDSNYGTRIDYILIT 290 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ++ ++ + SDHCP+ +D Sbjct: 291 RGLLPWVKAADIQPLI-----------KGSDHCPVYVDL 318 >gi|326798228|ref|YP_004316047.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326548992|gb|ADZ77377.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 282 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 69/326 (21%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M RK + L ++ + AQ++R+ ++N+ + + +LW++ ++ Sbjct: 1 MKRKIIGVLCLLIIGISTLQAQQLRVATFNVRYANPGDTGNLWEDRAP-------VVAAL 53 Query: 61 AKNLDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 D DI QE + +A + + S AI Sbjct: 54 IDFHDFDIFGTQEALKRQLDDISAA-----LPEYQRYGLGRDDGQEGGEHS------AIY 102 Query: 116 VRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSF 167 +K +L++ P + +++ R + + + ++ +V + H Sbjct: 103 FKKDRFFLLKKGDFWLSETPDKPSFGWDAKSHKRICSWIQLRDKKSKREFFVFNAH---- 158 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 D S L L I + P + GD N G+ + W Sbjct: 159 --YDHQGIQARKESSKL-----ILNK-IKE-IAQGAPTIFTGDMN------GSEETEWYQ 203 Query: 228 IDPNDSLIRFPKEKDS----------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 +L++ ++ + K+L+ ID+ + ++ F Sbjct: 204 ALAQSALLKDTQKLVAKPYKPNASFNGFGNEKSLQATAIIDHIFVTKD---------FKA 254 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + GK SDH P+ +D + Sbjct: 255 LKWGVLTDTYHGKFPSDHFPVMVDLE 280 >gi|302341817|ref|YP_003806346.1| endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM 2075] gi|301638430|gb|ADK83752.1| Endonuclease/exonuclease/phosphatase [Desulfarculus baarsii DSM 2075] Length = 345 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 79/271 (29%), Gaps = 62/271 (22%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNT------------------WCIFYSTERLINHSKRD 105 L D + LQE+ A ++ F ++ W Y Sbjct: 93 LRPDALALQEVD--FAASRSFDQDQAVLLAQGLGLGWLTKAVGWDKKYVPYPYWPPQHHF 150 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIH 163 A+ R + + + G + A +R +E+ G+++W+ +H Sbjct: 151 GRVVSGQALLARYPLADLERHALAPRGDTPFYYNALYMDRLVQTAALELGGRRVWLACLH 210 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL----G 219 L++ D ++QA I + P ++ GDFN + G Sbjct: 211 LEA---WDRPTRERQ------ARQAAA----ILARLRERGPLIVMGDFNTTPTWARVQTG 257 Query: 220 NNDDFWKTIDPNDSLIRFPK-------EKDSRCNANKNLRNKI-----PIDYFVMDQNAY 267 D+ + +L ++ + L +D+ D Sbjct: 258 FVDEPEQDFRGEATLAAMTALSLREAFDQGGSADEAATLTFPADRPSRKLDHIFYDPTRL 317 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + + SDH P+ Sbjct: 318 ELVWRR-----------VVVEAGQASDHLPV 337 >gi|255656137|ref|ZP_05401546.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-23m63] gi|296450430|ref|ZP_06892186.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296879447|ref|ZP_06903441.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] gi|296260691|gb|EFH07530.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296429593|gb|EFH15446.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] Length = 209 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 88/250 (35%), Gaps = 67/250 (26%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYN--AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 T + Y K L+ D++ LQE+ A+ V + +F + + +N Sbjct: 20 LTKMGLYLKQLNCDVICLQEVLYPQFLALKAVLNMDG--VFATNVKKVNMIY---GICTF 74 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 T + N L S+ R A+ + ++ G+ I V++ HL Sbjct: 75 TTFKMLNSNHFFL------------TSKKEQRGALCITIDAYGRIINVINTHLG------ 116 Query: 172 SLENTYSPSCSLLSQQ--AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 L +Q A+ L + I + + V+ GDFN K +L +D +++ Sbjct: 117 ------------LDRQERAKQLDEIIDYRNRLVGIVVLCGDFNEKNVFLSMFNDMAISLN 164 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + ++ IDY +++N L + +I Sbjct: 165 KS--------------YLSTFEKSNSRIDYIFVNKN--TELKGYTVEKIY---------- 198 Query: 290 KRLSDHCPIS 299 LSDH P+ Sbjct: 199 --LSDHYPVI 206 >gi|295085529|emb|CBK67052.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 611 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 88/304 (28%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + ER H+ I + Sbjct: 53 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + C SL Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYC-----------------CTHLSLAEEDR 151 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I P +AGD N DF K + + ++ P Sbjct: 152 ------MKSLEIVKSLI---ASYKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ K IDY + S + SDH PI Sbjct: 198 EKHTYPA-----PDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|226225662|ref|YP_002759768.1| hypothetical protein GAU_0256 [Gemmatimonas aurantiaca T-27] gi|226088853|dbj|BAH37298.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 257 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 87/300 (29%), Gaps = 60/300 (20%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + S+NI +GV + RT L AD+V Sbjct: 10 AVLAATRVPPQDDAFTVASYNIRHGRGMDGVV----DLHRTGEAIA-------RLGADVV 58 Query: 70 FLQEMG-SYNAVAKVFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQS 127 LQE+ + +V + + + + +A+ Sbjct: 59 ALQEVDRNVERSGRV---DEPRVLGEQLSMSHAFGAFMPYQGGEYGMAI--------VSR 107 Query: 128 YPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 P+ ++ GN V LL E +G ++ V+++H F +T + Sbjct: 108 LPIRRSQALRLPDGNEPRVALLAELELPSGARVLVVNVH-----FDWVGNDTLRYA---- 158 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 Q + L + + +P ++ GDFN + R + +S Sbjct: 159 --QVKALGAVLDTVR---LPVILLGDFNDQPASRTLQHWQ--------PRFRVAAKPESD 205 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K ID+ ++ A + + I SDH PI Sbjct: 206 RFTFSSTEPKQEIDHILLAP-ARAWGEA-TVRVIT---------DPITSDHRPIVAQLRL 254 >gi|184157496|ref|YP_001845835.1| extracellular nuclease [Acinetobacter baumannii ACICU] gi|332872463|ref|ZP_08440434.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6014059] gi|183209090|gb|ACC56488.1| predicted extracellular nuclease [Acinetobacter baumannii ACICU] gi|322507811|gb|ADX03265.1| Putative extracellular nuclease [Acinetobacter baumannii 1656-2] gi|323517411|gb|ADX91792.1| extracellular nuclease [Acinetobacter baumannii TCDC-AB0715] gi|332739349|gb|EGJ70205.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6014059] Length = 812 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKSLNKAV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFL--DSLENTYSPS---C-- 181 D + A K V+ HLKS C + N C Sbjct: 574 ---VLDLGDKNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSNADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D + Y ++ + + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGAGN---LDHAIADADLYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYSEDAYRSSDHDPVIVDLDL 778 >gi|119226210|ref|NP_001073171.1| tyrosyl-DNA phosphodiesterase 2 [Danio rerio] gi|102230105|gb|ABF70183.1| Ttrap [Danio rerio] Length = 369 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 95/280 (33%), Gaps = 48/280 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+ ++SWN++ L +L R L Y D+VFLQE Sbjct: 122 KLSIISWNVDGL-----DTLNLADRARG------LCSYLALYTPDVVFLQE--------- 161 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P + + + S++ T I +RK V+ L+ Sbjct: 162 LIPA--YVQYLKKRAVSYLFFEGSDDGYFTGIMLRKSRVKFLESEIICFPTTQM-----M 214 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + V +G+K++++ HL+S C S E T +Q + + I + Sbjct: 215 RNLLIAQVTFSGQKLYLMTSHLES-CKNQSQERT---------KQLRVVLQKIKE-APED 263 Query: 203 VPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + AGD N + + N W+ + + R+ + + N ++ Sbjct: 264 AIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHC-RYTWDTKANSNKTVPYVSRC 322 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + + ++ E G+ SDH Sbjct: 323 RFDRIFLRFAKTRPAVTPDHMALIGMEK--LDCGRYTSDH 360 >gi|301385402|ref|ZP_07233820.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302060619|ref|ZP_07252160.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] gi|302129991|ref|ZP_07255981.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 261 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 45/256 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ ADIVFLQE+ + +V + + S + + D Sbjct: 43 LREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 102 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +L + ++ + +HL F Sbjct: 103 DHGNALLSKYPIIQHENL-DVSIDGTEQRGLLHC---ILQVPDHGQVHAVCVHL--GLFE 156 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTI 228 QQ + L + + P ++AGDFN D + Sbjct: 157 SHRR-----------QQLKLLAQLMD-RLPEGAPVIVAGDFN---------DWRQRADAL 195 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ K+ + P+ +D+ + + Sbjct: 196 LQGTGLHEVFVQRFGA--PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRP 245 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 246 WSHLSDHAPLAVEVTL 261 >gi|326789162|ref|YP_004306983.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326539926|gb|ADZ81785.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 257 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 102/292 (34%), Gaps = 46/292 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+N+ + + R+ Y ++++Y D D+V LQE+ + Sbjct: 1 MKVMSFNV---RADSILDVRNRWRHRSEIVYEVIKKY----DCDVVGLQEVTDRMYMDLN 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-----PLLGAKDSFS 138 + + I ++R++ + V++ + ++++ P + Sbjct: 54 KAIDGYYIIGKGRTKRYFNERNN-------LLVKEDYNLLEEETFWLSKTPSKTGSSVWY 106 Query: 139 RAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R ++++ N KI + + HL C L S L + +++ Sbjct: 107 SMFPRICTTAVIQLANNLKIRIYNTHLD--CLLPSAREYG------LKKIGEYVG---EC 155 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ +P ++ GDFN G + K + + K + N+ + Sbjct: 156 YQKEKLPCILMGDFN-----AGPQSKLIQQFSQGS---YSDKRFIAVQDVRKEIYNEATM 207 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCPISIDYDF 304 +F I F + D++ + SDH PI + + Sbjct: 208 GHF--KGKTRGLHIDYIFVSEEFEIKDVEIIKYQKNNKYPSDHYPILAEINL 257 >gi|260436042|ref|ZP_05790012.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] gi|260413916|gb|EEX07212.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 79/323 (24%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ + V++ +WN+N RT D + + ++ D++ LQ Sbjct: 1 MLRVFDATGSAVQIATWNVN--------------SVRTRLD--QVLSWLESEQPDLLCLQ 44 Query: 73 E--MGSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQS 127 E + + F W + ++ N R+ D+ A + ++ Sbjct: 45 ETKVDDPLFPLEAFKSAGWHVHIHGQKAYNGVALISREPLEDVRCGFA---GELPNDAEA 101 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLL 184 L K + +NG + VL++++ + L S + Y + C Sbjct: 102 NDLGAQKRV-----------ISAMLNG--VRVLNLYVPNGSSLKSEKYPYKLAWLGC--- 145 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKD 242 LK ++ +++ P + GDFN + D +T I +D+ + ++ Sbjct: 146 ------LKRYLDAQEQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQALRDAL 199 Query: 243 SR------------CNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYN 281 + ID+ + + + Sbjct: 200 GERLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHVYLCDELLGLARSCVIHKRM-- 257 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 ++ SDH P+S+ D+ Sbjct: 258 -----RGNQQPSDHAPVSVVVDW 275 >gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 650 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 76/255 (29%), Gaps = 49/255 (19%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D L + AD+V L E+ + + RL Sbjct: 436 DLAALDRAIGR--ADVVLLSEVDR----GWLLNGGHDTLHLLATRLEMPYVFAPAAGALW 489 Query: 113 AIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCF 169 AV R + ++ P +GA A+ + V+ +G ++ V+ HL Sbjct: 490 GDAVLSRWPVRQAQTRALPAVGAPTGAQ------ALGVTVDFSDGVRLAVVSTHL----- 538 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 T QA+ + + + P V+AGDFN D + + Sbjct: 539 -QPPPGTDPV------VQARAVAE-FATEYADGRPLVVAGDFN-----TEPGDPAFTALT 585 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + F + + + R + ID+ + + D + Sbjct: 586 DAGLVDAFAAVRPLPTSPADDPRTQ--IDHIFVSPD--------------LPTTDPVAIA 629 Query: 290 KRLSDHCPISIDYDF 304 SDH P+++ Sbjct: 630 STASDHLPVAVTLKL 644 >gi|325927724|ref|ZP_08188952.1| putative extracellular nuclease [Xanthomonas perforans 91-118] gi|325541925|gb|EGD13439.1| putative extracellular nuclease [Xanthomonas perforans 91-118] Length = 1193 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ VL +H + Sbjct: 695 GGVARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGMRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 353 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 81/262 (30%), Gaps = 52/262 (19%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI+ LQE+ +V N +C S + N++ + T I L Sbjct: 112 PDILILQEIEGE----RVI--NDFCRQLSRKESYNYA-------VITPIEKNAAFTTALL 158 Query: 126 QSYPLLGA---KDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSLENTYS 178 P+L + + R E+ + I + + V H KS ++ E Sbjct: 159 SKLPILDVFIHRLHTEKESVRPLCEVWINIGSEEYPEPLVVFSTHWKSKLGKNTAEIRRM 218 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + Q+ Q LK K + +VI GDFN+ + + + + + Sbjct: 219 QE-KQVFQKIQELK-----KTNPDIHYVICGDFNQPLEEFD----LLTELPNSWNRCEYL 268 Query: 239 KEKDSRCNAN---KNLRNKIPIDYFVMDQN---------------AYKFLIQESFSEILY 280 + N ID+ +N A LI + Y Sbjct: 269 RALSVNAQPGGSFCYKGNWQAIDHIFYSENLSDNKGLDIEHFAVIAIPPLITSAGKPNAY 328 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 + K SDH PI + Sbjct: 329 SVFSGKGY----SDHLPIGVRL 346 >gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7] Length = 258 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 84/308 (27%), Gaps = 84/308 (27%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 KV+L+SWN+N L G LDADI LQE Sbjct: 6 DKVKLISWNVNGLRAVVGKGFV---------------DIFNELDADIFCLQE-------- 42 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + A RK Y Sbjct: 43 ------------TKLQAGQIELDLPGYEQYWNYAERKG--------YSGTAVFTRIKPLS 82 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQK 198 R +++ V+ + SF ++ + L + +W D ++ Sbjct: 83 VRYGMDIAEHDTEG--RVITLEYDSFYLVNVYTPNSKDGLARLPYRMKWEDDFRNYLKTL 140 Query: 199 KESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +++ P V+ GD N + + + + F Sbjct: 141 EQTK-PVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTELLAAGFIDTFRYFYPD 199 Query: 244 RCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + IDYF++ + LI S + ++ SD Sbjct: 200 KTGEYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASIHQEIFG-----------SD 248 Query: 295 HCPISIDY 302 HCP+ ++ Sbjct: 249 HCPVELEL 256 >gi|237801483|ref|ZP_04589944.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024342|gb|EGI04399.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 379 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 101/319 (31%), Gaps = 57/319 (17%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + + ++P +T ++ E + N H + T Sbjct: 129 LQGVDDGAKNSDYQDQLKLLEERLTDLYPCSTQAFYWKAEFVPNPHIWGSVGRKLATLSR 188 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + LQ P + + V L +G ++ V++ SL Sbjct: 189 FHIDSAERLQLPVPDANIISRQFQPKDALLVSYLPLRDGGELAVVN---------TSLST 239 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGNND 222 +Q + + + + P++I GDFN ++ +Y +++ Sbjct: 240 AKRDG--TAQKQIAATETLLDKLESGGTPWLIGGDFNLLPLGQYQRLPEPQRQSYAADSE 297 Query: 223 --DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 W+ P +S + P D + + + S S Sbjct: 298 LHALWEK------YPMIPSNAESSGIDRSKWLTRFPNDSRINGPDRTVDYLFYSPSLKRV 351 Query: 281 NEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 352 SARVRRDDTLLISDHLPVI 370 >gi|150390789|ref|YP_001320838.1| endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] gi|149950651|gb|ABR49179.1| Endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] Length = 379 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 91/281 (32%), Gaps = 60/281 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R++S+NI + ++ R + D + + K A+++ LQE+ + K Sbjct: 151 RLRIMSYNI---------HIGRDLFGRYSLD--QIAEVIKESRAEVIGLQEVDQHFIRTK 199 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S E +N++ N +I + + N + S + Sbjct: 200 ---FQDQIKYLSEELGMNYA-YGPNLNI---VGAKYGNAVLSVHPIEDYENVMIPSGRES 252 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R ++ +++ G+ + HL N Q + ++ I + Sbjct: 253 RGLLKTTIDVEGQLVDFFVTHL--------GLNQKER-----MGQVKVIEQQIDMAQN-- 297 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDY 259 P ++ GDFN + + + + K N + IDY Sbjct: 298 -PVILVGDFNAR-----PHSQEIQKLSRG----LLDVGKRMGYNDTPTFDLPVLSGRIDY 347 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 +DQ + Y R SDH P++ Sbjct: 348 IFVDQ---------QMEILTYRV-----IKSRASDHYPVTT 374 >gi|78046033|ref|YP_362208.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034463|emb|CAJ22108.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1193 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPVPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENLSVLQTLAARVNADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTAQIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ VL +H + Sbjct: 695 GGVARVEVLSIAQEGKTTTWTEPGGGVSLLNDRPPLVLTANVHQADGRVLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGMRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|301308230|ref|ZP_07214184.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300833700|gb|EFK64316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 365 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 80/270 (29%), Gaps = 60/270 (22%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N DADIV LQE + + + + S + + S I Sbjct: 123 NKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYD-ALSMYPYRSVFYQSSTKFQSFGI 181 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV YPL ++ + + V I GKK+ +++ HL+SF Sbjct: 182 AV--------FSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLINNHLESFKLTMEDR 233 Query: 175 NTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 YS P+ + ++QA+ + + I ++ GDF Sbjct: 234 TRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIK--NAKGDYVLVCGDF 291 Query: 212 NRK---INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 N + D + + ++ ID + N Sbjct: 292 NDTPISYAHRTIQGDLMDAFAESGRGMGITYNQN---------FFWFRIDNILHSPN--- 339 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 340 ---------MTSMNCSVDKVAY--SDHYPL 358 >gi|300692524|ref|YP_003753519.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] gi|299079584|emb|CBJ52262.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] Length = 248 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 24/156 (15%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F N + Y + H+ + + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPNYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F S + Sbjct: 93 MSRYPILLSEN---LDISDH--RFEQRGLLHAVADLGFGEVHLLCAHF--GLFARSRQ-- 143 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +QA+ L + + + P ++AGDFN Sbjct: 144 ---------RQAEALIERVRSVVPTDAPLLVAGDFN 170 >gi|213626805|gb|AAI70146.1| Deoxyribonuclease I [Xenopus laevis] Length = 350 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 71/322 (22%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 FLVLVAMTACFLQAGFAFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 I+ ++E+ + ++ V K + + S H R S + + A R+ Sbjct: 53 -IIAIEEVMNADNTAIISLVKELSLATKLNYNVLISD-----HLGRSSYREKY-AYVYRE 105 Query: 119 KNVRVLQQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 V+ + + G DSF R R V + ++ IH Sbjct: 106 DTVKPTEWYHFDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH--------- 153 Query: 173 LENTYSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDP 230 SP +++ + L W+ K+ +I GD+N +Y+ + + Sbjct: 154 ----TSPDYAIM--EVDALYDAWVDAKQRLKMENILILGDYNAACSYVASRHWPIIRLRH 207 Query: 231 NDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNE 282 + L+ ++ C D V + ++ ++ Y+ Sbjct: 208 VEELVWLIGDKEDTTVSTNTNCA----------YDRMVAGGEELQRGIVPDTAKAFNYHV 257 Query: 283 DDIKSR--GKRLSDHCPISIDY 302 + K +SDH P+ ++ Sbjct: 258 AYDLTYEMAKAVSDHYPVEVEL 279 >gi|149369902|ref|ZP_01889753.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49] gi|149356393|gb|EDM44949.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49] Length = 308 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 95/294 (32%), Gaps = 59/294 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYNA 79 ++SWNI + ++ + K D DIV +QE+ G A Sbjct: 59 SIISWNI-----------RDFGQSKNDTEIKAIATIVK--DFDIVLIQEVVAKHPGGAQA 105 Query: 80 VAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 VAK+ + W S + A K RV + P L + Sbjct: 106 VAKLADQLNRMGSKWDYSISDPTKSPSAYMSER------YAYLWKTARVSLKGKPFLDKE 159 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 S L + K I V++ H S ++ P ++ + Sbjct: 160 LSSLVYREPYIAHFLFKGTSKPIAVINYH--------SRKHDDHPE--------NEIQHF 203 Query: 195 ITQKKESLVPFVIA-GDFNRKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + K ++ GDFN + N D+ +K N +C Sbjct: 204 LDYNKRLKTDNILLCGDFNLNEAHPVWNSFYDNGYKNAISNTPTTL-----KMKCKDGNY 258 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L + ID + + S I E+ K+R +LSDH P+SI+++ Sbjct: 259 LNHS--IDNMYWQGD-FTITSAGSLDFIQKCENLTKAR--QLSDHLPVSINFNL 307 >gi|325929159|ref|ZP_08190302.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|325540478|gb|EGD12077.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 287 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 94/291 (32%), Gaps = 51/291 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R++S+N+ V + KR + K D+ QE+ S A Sbjct: 35 RVMSFNVR-------VPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAE 87 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDSFS 138 + R +R ++D H + + ++V++ P ++ Sbjct: 88 QLPDY-------RWFGQGRRGDDSDEHMGVFYDARVLKVVESGNFWLSDTPERAGSITWG 140 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A L E + ++ ++ + H + D E S L+ + L Sbjct: 141 NVLPRMATWALFERRSDKRRFYLFNTHFP---YRDEDEPARERSARLILSRIAQLPA--- 194 Query: 197 QKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 VP V+ GDFN KI Y +L ++ ++ + N Sbjct: 195 -----TVPVVLTGDFNSDPDKITYP--------------TLTAVLRDARAQASKRSGPEN 235 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ +++ + D + G SDH P+ ++D+ Sbjct: 236 -TFQDFTTHPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDW 285 >gi|291513563|emb|CBK62773.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 406 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 48/267 (17%) Query: 65 DADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 D DI+ +QE + + A K + + YS S +K Sbjct: 158 DPDILGVQECSIAAQKADMKAMLGDLYD--YSENEKPTSSPGLIFW--------KKGAFE 207 Query: 123 VLQQS-YPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYS- 178 + ++ LL K + R + ++ +G I V +HL++ + + + Sbjct: 208 LEEREIVDLLNGKYPNTYEKQRYGHFVRLKHLASGSSILVYSVHLRAGSDVATADLRKEM 267 Query: 179 --PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKT---ID 229 C L ++++ E+ P ++ GD N R I + ++ +K+ +D Sbjct: 268 IDNLCPLAARKS----------AETGCPVIVLGDMNCTPNRLIGGIPSSPQVYKSHGFLD 317 Query: 230 PNDSLIRFPKEKDS----------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + E + C IDY + + + Sbjct: 318 TFTQTRQRTNENYATYSSSAAVVEECRVEVGENGSRRIDYIFTYPESR-VTTTRYATVLN 376 Query: 280 YNEDDI--KSRGKRLSDHCPISIDYDF 304 + ED K R SDH P+ + +F Sbjct: 377 FAEDGTANKLRSPLPSDHHPVRAELNF 403 >gi|261362111|gb|ACX71490.1| sphingomyelinase [Bacillus weihenstephanensis] Length = 242 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 MSTNQNDTLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIF-----YSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + ++ + + + D AI + V + Sbjct: 83 DNSASNRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ D++ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK 214 ++Q Q ++++I K +V I GD N Sbjct: 196 TKQLQEIQEFIKNKNIPNNEYVLIGGDMNVN 226 >gi|77166097|ref|YP_344622.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254435463|ref|ZP_05048970.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|76884411|gb|ABA59092.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207088574|gb|EDZ65846.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 88/289 (30%), Gaps = 60/289 (20%) Query: 24 VRLVSWNIN---------TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +RL+S+NI + + ++ R T + Q D DIV LQE Sbjct: 19 LRLLSYNIQAGVITTRYHHYLTRSWKHILPDA--RRHQTLTSIAQVIS--DFDIVGLQEA 74 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S ++ F + E IA ++ N + + L Sbjct: 75 DS-GSLRTGFVNQAKLL---AELCDFPYFHQQATRRFANIA-QQSNALLSRIQPSYLRTY 129 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R A+ + VL IHL S + QQ ++ Sbjct: 130 RLPGLVPGRGAILAHFGNPKNPLIVLLIHLALG--------RRSRT-----QQLDFISSL 176 Query: 195 ITQKKESLVPFVI-AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + P+V+ GD N ++ + + + L + + + R Sbjct: 177 V-----HNHPYVVVMGDLNCQL-----HSPELRALLRKTGLKAPVTKIAT----YPSWRP 222 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K ID+ ++ S I + + +SDH P++ + Sbjct: 223 KRHIDHILVSP---------SLEVI-----QVGALAHAVSDHLPLATEI 257 >gi|156977170|ref|YP_001448076.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116] gi|156528764|gb|ABU73849.1| hypothetical protein VIBHAR_05956 [Vibrio harveyi ATCC BAA-1116] Length = 317 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 92/301 (30%), Gaps = 30/301 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---RQYAKNLDADIVFLQEMGSYNAV 80 + + N+ G ++ L + L+ DI+ LQE+ S Sbjct: 7 ITFATANLLNFVAPPGAYYDFENIYSLDDWQDKLTWTKSQFDQLNPDIIGLQEVFSIEET 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSF 137 F + + + + + + A+A R V L D Sbjct: 67 QTFFAEIGYQ-YSACVDTPHIEGDYIYSRPVVAVASRFPIESFEAVTFDKDTLNAFGDID 125 Query: 138 SRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDS--LENTYSPSCSLLSQQ-----AQ 189 + +R+ V + I V HLKS DS E P LS Q A Sbjct: 126 APPFSRKPVRATIIHPIIGHICVYVTHLKSQRPADSETPEQASRPIARWLSTQQRGWEAA 185 Query: 190 WLKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L+D + + + +P ++ GD N+ I N+ + + + ++ + + + Sbjct: 186 MLRDAMQKHYANNPMPTLLMGDMNQAITKTSVNNVLVEQYGDSVTDLQLCDGWELQVAPS 245 Query: 249 KNLR--------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI------KSRGKRLSD 294 R +DY ++ Q Y D R K SD Sbjct: 246 LESRPATHYDFAKGNVLDYILLSQEFDAHADVSIAEVTNYQVLDTHLINPSFERDKNASD 305 Query: 295 H 295 H Sbjct: 306 H 306 >gi|225868757|ref|YP_002744705.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. zooepidemicus] gi|225702033|emb|CAW99629.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. zooepidemicus] Length = 926 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 97/323 (30%), Gaps = 59/323 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 556 KLSIASYNIENFSANPSSTKDEKVRRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 609 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + + ++ T+ + N ++I T + + V + Sbjct: 610 DGTTDARQSAQRLIDAIKALGGPTYQ-YVDIAPENNADGGQPGSNIRTGFLYQPERVSLS 668 Query: 125 QQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 + +G D + A R+++ G K+ V+ HL S Sbjct: 669 DKPRGGVNDAVKWVNGELSLSVGRIDPTNPAWKSVRKSLAAEFIFQGHKVVVVANHLNSK 728 Query: 168 CFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +SL P + A+ L + + V+ GDFN Sbjct: 729 RGDNSLYGRVQPV--TFKSEERRHVLARLLSQFTKEGASQQANIVMLGDFNDYEFTKTI- 785 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 K I+ + + S + N +D ++ +N L+ ++++ Sbjct: 786 ----KLIEEGAMANLVSRHELSDRYSYFYRGNNQTLDNMLLSRN----LLGHYEFDMVHV 837 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 838 NSPFMEAHGRASDHDPLLLQLSF 860 >gi|326801928|ref|YP_004319747.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326552692|gb|ADZ81077.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 310 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 92/314 (29%), Gaps = 56/314 (17%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSY 77 AQ+ + ++NI + +E + +R Y ++ + + DI QE Sbjct: 23 FAQRFYVATYNIRNDNNKEDAARGDGWKQR----YPIIADLIRFHEFDIFGTQEGLYHQL 78 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + P + + ++AI + +L L + + Sbjct: 79 EDLKSSLPNYNYTGVGRDDG--------KQAGEYSAIFYNTEKFDLLDHGDFWLSTQTDY 130 Query: 138 SRAGNRRAV-------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G + +L V+ NGK ++ ++H F S L+ + + Sbjct: 131 PNKGWDAVLPRICSWAKLQVKANGKTLYFFNVH-----FDHVGTTARKESAKLILSKVKE 185 Query: 191 LKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 L ++ GDFN + + + N Sbjct: 186 L--------AGNHTAILTGDFNVDQHSNSYQVLEQSHILQDAFEAAPFRYVTNGTFNNFN 237 Query: 247 ANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEILYNEDD-------------IKSRGK 290 N + ID+ + + ++ +++ L N + R + Sbjct: 238 PNS--KTDSRIDHIFLTTDFKVHKYGILTDTYRSTLQNPQEAYQSGNFPKEVRLTDHRAR 295 Query: 291 RLSDHCPISIDYDF 304 SDH P+ I D Sbjct: 296 VPSDHFPVMISLDM 309 >gi|261362100|gb|ACX71483.1| sphingomyelinase [Bacillus mycoides] Length = 244 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 NA ++ N + + ++ + + + D AI + + + Sbjct: 83 DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ HL++ D++ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK 214 ++Q Q ++++I K S +V I GD N Sbjct: 196 TKQLQEIQEFIKNKNISNNEYVLIGGDMNVN 226 >gi|319956480|ref|YP_004167743.1| endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] gi|319418884|gb|ADV45994.1| Endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] Length = 531 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 70/236 (29%), Gaps = 37/236 (15%) Query: 20 VAQKVRLVSWNINTL--SEQEGVSLWKNSVKRT-------TSDYTLLRQYAKNLDADIVF 70 ++ +++ SWN+ L +G + R Q +LDAD++ Sbjct: 18 HSRTIKIASWNVENLFDMHYQGTEYEEYVPGRHGWSEAMLRKKLEHTAQVICDLDADVIG 77 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND--IHTAIAVRKKNVRVLQQSY 128 LQE+ + ++++ + + +HTA+ R +V Sbjct: 78 LQEIENDEVLSRL------QRLLKRVGCPYPYRAVTGGRAPVHTALLSRIPLAKVRDLPV 131 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 G + A R + + H +S S +L A Sbjct: 132 TRYGRQRPILEATLRL---------DPSLKIFVNHWRS--------KRGPESERILY--A 172 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L+ + + S +++ GDFN D + + Sbjct: 173 KALRKRLMKLPPSTE-YLLLGDFNSDWEEFRIIDPKLNDTGGITGINQVMATTRDG 227 >gi|114328666|ref|YP_745823.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316840|gb|ABI62900.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 275 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 103/313 (32%), Gaps = 73/313 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 +VR+ +WNIN+L + LL + LD D++ LQE + Sbjct: 5 RVRVATWNINSLRLR----------------LPLLEKVLAELDPDVLCLQETKVPDP--- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +FP + + +H + +A+ + + ++ P AK Sbjct: 46 --LFPAD----LFPGRAAEHHGYAHVAYRGMKGYNGVAILSRIPFTVDEAAPDWCAKG-- 97 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 AV L V + + ++ + D + +P + + ++++ T Sbjct: 98 --DCRHMAVSLAVPSGPVALH--NFYVPAG--GDEPDPAINP---KFAHKLAFVEE-ATA 147 Query: 198 KKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + PF V+ GD N I L ++ K + S P+ R Sbjct: 148 YFAAQSPFTRTVLVGDLN--IAPLEHDVWSHKQLLNVVS-HTPPETTRMRQWLETG--FV 202 Query: 255 IPIDYFVMDQNAYK----------------------FLIQESFSEILYNEDDIKSRG-KR 291 I +FV + ++ + S + + ++R +R Sbjct: 203 DAIRHFVPSDRKHYTWWSYRNRDWRASDRGRRLDHVWVSPDLVSSLQGHTTLKEARDWER 262 Query: 292 LSDHCPISIDYDF 304 SDH P+S+ Sbjct: 263 TSDHVPVSVTLSL 275 >gi|255689971|ref|ZP_05413646.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] gi|260624578|gb|EEX47449.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] Length = 361 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 54/262 (20%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y KN +ADI+ LQE + + + ++ + S RK Sbjct: 125 SYLKNSNADIICLQEYNTAS-------NKKFVTEQDVKKALKAYPYQSIRQQ------RK 171 Query: 119 KNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCF 169 +V++ +P+L ++ ++ +++ ++ +N I +++ HL+S + Sbjct: 172 GDVQLACFSRFPILSSQLIEYKSDYNGSMKYVLNVNNDTITLINNHLESNKLTKEDRGIY 231 Query: 170 LDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKIN 216 D +++ + L Q + L + + ++ GDFN + Sbjct: 232 EDMIKDPNAKKVKTGLRQLIRKLGEASAIRASQADSVARIITENHYPTMIVCGDFN-DGS 290 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 + + +D F + + + ID ++ + + Sbjct: 291 ISYTHRVLTQELDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPDLKAY------- 338 Query: 277 EILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 ------NCTVDRSIKASDHYPI 354 >gi|260654366|ref|ZP_05859856.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella anthropi E3_33 E1] gi|260630999|gb|EEX49193.1| endonuclease/exonuclease/phosphatase family protein [Jonquetella anthropi E3_33 E1] Length = 282 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 81/283 (28%), Gaps = 45/283 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ L ++NI + T D L Q ++ AD++ LQE+ A+ Sbjct: 22 AEAFSLGTFNIEYFAVTGQKRY-------TPEDCAHLAQTIQDSRADLLSLQEIEGDGAM 74 Query: 81 AKVFPK--NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + W + + AV+ + + + S Sbjct: 75 TYLVARHLPGWRFAGNDTASSQDLYFLWKDS-----AVQMLSGPDVYFANASFQHDGSTF 129 Query: 139 RAGNRRAVELLVEI--NGKKIWVLDIHLKS----FCFLDSLENTYSPSCSLLSQQAQWLK 192 R +R + + +G + ++++HLKS Y+ + + Q + L Sbjct: 130 RLFDRPPLVATFKDKASGFQFTLVNVHLKSQSTRGKSDVVSAKAYNDAKR--AAQLEALD 187 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 ++ P I GDFN + P + Sbjct: 188 RLVS---SLNGPIFITGDFNYE--------------SPKTAFRLLTL----PDGLYSYDA 226 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ F + E + + DH Sbjct: 227 TRSSLDHI--GYAGLTFSRPPALREAESSIPRRSPGRSQHPDH 267 >gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|332186411|ref|ZP_08388155.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] gi|332013394|gb|EGI55455.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] Length = 276 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 90/303 (29%), Gaps = 57/303 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++A+ ++++++N+ S++ + + + D++ QE+ Sbjct: 11 PVGAMAETLKVMTFNVRYASDEGAERWAARRPV--------MVELIRRAVPDVIGTQELL 62 Query: 76 SYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------S 127 + + P W + +R+ H +D H I R + ++ Q Sbjct: 63 QRQGDDIVRALPGYRW---FGRDRMGGH------DDEHMGIFYRPDRLTLVDQGDFWLSD 113 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDI--HLKSFCFLDSLENTYSPSCSLL 184 P + S+ R A + E + K L + HL D + +L+ Sbjct: 114 TPEVVGSQSWGTDLPRMASWAVFETKDAKPRRFLFVDTHLA---HRDEDAEARDKAAALI 170 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + L +P ++AGD N + P+ + R + Sbjct: 171 LARLPTL--------AKGLPVILAGDMNAR---------------PDTAAYRRFAGALTD 207 Query: 245 CNANKNLR-NKIPIDYFVMD--QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 C R + +L F D SDH P+ Sbjct: 208 CWLGAKRREGPEMTFHDFTGTPDRRIDYLFLRGFRADAIATDTWHRGKTYPSDHFPVRAT 267 Query: 302 YDF 304 F Sbjct: 268 LSF 270 >gi|330952963|gb|EGH53223.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 380 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 104/321 (32%), Gaps = 60/321 (18%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS--------------YNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIA 115 LQ + VA ++P +T ++ E + N H + T Sbjct: 129 LQGVDDGAKNSDYQDQLALIKERVADLYPCSTQAFYWKAEFVPNPHIWGSVGRKLAT--L 186 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSL 173 R + P+ A + + A+ + +G K+ V++ L Sbjct: 187 SRFHIDSAERIQLPVPDANIISRQFQPKDALLVSYLPLRDGGKLAVINTSLT-------- 238 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------RKINYLGN 220 T + +Q + + + + P++I GDFN +++ Y + Sbjct: 239 --TARHAGDTAPKQVAATETQLDKLESGGTPWLIGGDFNLLPLGQYQRLPEEQRLGYAAD 296 Query: 221 ND--DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 ++ W+ P +S P D + + + S S Sbjct: 297 SELHALWEK------YPMIPDNAESSGIDRSKWLTHFPNDSRINGPDRTVDYLFYSPSLK 350 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 + + +SDH P+ Sbjct: 351 RVSARVRRDDTLLISDHLPVI 371 >gi|298374557|ref|ZP_06984515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298268925|gb|EFI10580.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 365 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 86/268 (32%), Gaps = 56/268 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + QY N DADIV LQE + + + + S + + S I Sbjct: 123 NKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYD-ALSMYPYRSVFYQSSTKFQSFGI 181 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 AV YPL ++ + + V I GKK+ +++ HL+SF Sbjct: 182 AV--------FSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLINNHLESFKLTMEDR 233 Query: 175 NTYS-----------------------PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 YS P+ + ++QA+ + + I ++ GDF Sbjct: 234 TRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIK--NAKGDYVLVCGDF 291 Query: 212 N-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 N I+Y +TI + + + N+N ID + N Sbjct: 292 NDTPISYAH------RTIQGDLTDAFAESGRGMGITYNQNF-FWFRIDNILHSPN----- 339 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 340 -------MTSMNCSVDKVAY--SDHYPL 358 >gi|89071355|ref|ZP_01158492.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] gi|89043144|gb|EAR49387.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] Length = 232 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 66/201 (32%), Gaps = 53/201 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-----SY 77 +RL S+NI +R + Q + DAD+V LQE+ Sbjct: 2 TLRLASYNIR--------KCLGTDRRRDP---HRILQVLRQADADVVALQEVDMRLGPRP 50 Query: 78 NAVAK--VFPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A+ + V + + + S L H + I +R+ + + PL G Sbjct: 51 AALPRALVEAETDYAPLALVTSKSSLGWHGQ---------TILLRRGLRILSEARVPLPG 101 Query: 133 AKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + R AV + VE I V+ +H +Q + + Sbjct: 102 LE-------PRGAVLVEVEDPGRGPIRVVGVH-------------LGLLRRDRLRQIRAI 141 Query: 192 KDWITQKKESLVPFVIAGDFN 212 + + +P I GDFN Sbjct: 142 LSAL--RARGPMPAAIMGDFN 160 >gi|284992406|ref|YP_003410960.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065651|gb|ADB76589.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 278 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 88/307 (28%), Gaps = 61/307 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GS 76 A +R+++WN+ W++ ++ R D+ LQE+ Sbjct: 4 ADGLRVLTWNLWW-----RFGAWQDRQTAIEAELAAAR-------PDVCALQEVWIGPEG 51 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPLLG 132 A + + + +R D A R R P Sbjct: 52 DQA-ELLAGRLGMHAVVAPSPAPGRWQRRLG-DPAIGFANAVLSRWPITRSAVHELPAHP 109 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +D G R + + G + V L DS + + C+ Q + + Sbjct: 110 GED-----GERTVLHAEIAAPGGTVDVFTTQL------DSAPDRSATRCA----QVEEVV 154 Query: 193 DWITQKKESLVPFVIAGDFN-------------RKINYLGNNDDF---WKTIDPNDSLIR 236 ++ + + P V+ GD N K + W+ P+++ Sbjct: 155 RFVAARAGTAHPPVVTGDLNAEPDSDEIRRLCGHKTAPVVPGTVLVDAWRYAGPDEAGW- 213 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++ + + IDY ++ A + D G SDH Sbjct: 214 -TWDRRNP-HVAATFEPSARIDYVLVGPPTAGGRGHVRGVRLV----GDRPVDGVWPSDH 267 Query: 296 CPISIDY 302 C + + Sbjct: 268 CGVLAEL 274 >gi|255601665|ref|XP_002537723.1| conserved hypothetical protein [Ricinus communis] gi|223515316|gb|EEF24660.1| conserved hypothetical protein [Ricinus communis] Length = 287 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 102/316 (32%), Gaps = 67/316 (21%) Query: 24 VRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL+SWN+ S V+L RT + L +D D++ +QE+ +V Sbjct: 1 MRLISWNVQWGRSAHGDVNLT-----RTLDEARRL------VDFDVLCMQEVTRGFSVLA 49 Query: 83 VFPKNTWCIFYSTE-------------------RLINHSKRDSNNDIHTAIAVRKKNVRV 123 P + + +R N AIA R RV Sbjct: 50 GHPGDDQFAEIADALPGFTVLEAIGADLPALKLDAPAAPRRQFGN----AIATRLPVERV 105 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++ S P D + + R A+E ++ G + V+ HL+ + L Sbjct: 106 IRHSLPWP--VDPEAPSMQRVALEAVLRAPGGSVRVIVTHLEFYSLKQRLAQVDRL--RQ 161 Query: 184 LSQQAQ-------WLKDWITQKKESLVPF--VIAGDFN--------RKINYLGNNDDFWK 226 L Q+A ++ I ++ P V+ GDFN R++ + Sbjct: 162 LQQEAAGHAAHPVPAENAIGPFADTGRPVSAVVCGDFNSAYDSEAYRRMLEPLEGSPSFI 221 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 P + P + + + D+ + ++ L + Sbjct: 222 DAWPTLHPGQTPPMTAGVFDKVQWADGPLTCDFVFVTEDLRMRLRRCEV----------- 270 Query: 287 SRGKRLSDHCPISIDY 302 R SDH PI ++ Sbjct: 271 DGATRASDHQPILVEL 286 >gi|190893918|ref|YP_001980460.1| phosphatase [Rhizobium etli CIAT 652] gi|190699197|gb|ACE93282.1| putative phosphatase protein [Rhizobium etli CIAT 652] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 46/189 (24%) Query: 57 LRQYAKNLD-ADIVFLQEM----------GSYNAVAKVFPKNTWCI-----FYSTERLIN 100 L + A++L+ AD++ LQE+ +A +FP W + Sbjct: 20 LPRIARSLEGADVIALQEVTRGFSRNGFADMVADIAALFPDYFWVYGPACDLHVEAPEGG 79 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 S V + ++ L ++ R A E ++ G I V Sbjct: 80 LSPVRGIRFQF-GNMVLSRWPIASTRTLLLPRSRTLGKINPQRGATEAVINAPGGAIRVY 138 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-----------------V 203 +HL + SP + +Q Q+L I + Sbjct: 139 SVHL----------DHVSPDERI--RQLQFLNAQINAFVQEGGSLTGAAEFDLPEPPLPE 186 Query: 204 PFVIAGDFN 212 +VI GDFN Sbjct: 187 DYVILGDFN 195 >gi|296124108|ref|YP_003631886.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296016448|gb|ADG69687.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 387 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 63/291 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + ++R+ S N+ V R + L D+V QE Sbjct: 137 PAPEPMTGRLRIASCNVQ------DYQPAFGDVLRD----------LEELPPDVVAFQES 180 Query: 75 GSYNAVAKVFPKNTWCI----FYSTERLINHSKRDSNNDIH---TAIAVRKKNVRVLQQS 127 S N + + + + + F+ + ++ + + V+ + + Sbjct: 181 RSINPLCEDYFADWHKVQVEYFFVASKWPLEVLGHCDDSPFERSSGLVVKVAHP---EHP 237 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + L +R G R + + + L + S++ Sbjct: 238 FALANIHLMTARPGLRELTPGSILRGDGPAELAALTL------------------MRSEE 279 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 Q L+ +I + + +P ++ GDFN + W + + C Sbjct: 280 MQQLRHFI-ENARNGLPLIVVGDFNTP-ASSHVFQEAWGDLTGGFETAAIGPSHTAPCRP 337 Query: 248 NKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P ID+ + + + + SDH Sbjct: 338 ISFWPGTWPWSRIDHIRVTPE--------------WKFHQFVTGDRNGSDH 374 >gi|209551444|ref|YP_002283361.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537200|gb|ACI57135.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 44/188 (23%) Query: 57 LRQYAKNLD-ADIVFLQEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 L + A++L+ AD++ LQE+ +A FP W + + + + Sbjct: 20 LARIARSLEGADVIALQEVTRGFSRNGFADMTADLAACFPDYFWVYGPACDIHVEAGEGG 79 Query: 106 SNNDIHTAIAVRKKNVR---VLQQSYPLLGAKDSFSRAGN-RRAVELLVEINGKKIWVLD 161 T + +L LL + + R A E ++ + G I V Sbjct: 80 RQPVRGTRFQFGNMVLSRWPILSTRTLLLPRSRTIGKINLQRGATEAVIAVPGGAIRVYS 139 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-----------------VP 204 +HL + SP + +Q Q+L I + Sbjct: 140 VHL----------DHVSPDERI--RQLQFLNAHINAFVQEGGSLTGAGEFDLPEPPLPED 187 Query: 205 FVIAGDFN 212 +VI GDFN Sbjct: 188 YVILGDFN 195 >gi|302541699|ref|ZP_07294041.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653] gi|302459317|gb|EFL22410.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653] Length = 259 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 95/305 (31%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE A Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCVQETKCAEAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + + + +AV + S L G D R Sbjct: 42 FP-------FEPLRELGYEAAVNATGRWNGVAVLSRVGLDEVVSG-LPGGPDYEGDQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + L++ + + + Sbjct: 94 A-----IAATCGPVRVWSVYVPNGREIGHPHYDYK------LRWLDTLREAVGEDAKGPR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------------ 245 PF + GDFN +DD W + KE+++ Sbjct: 143 PFAVLGDFN----VAPTDDDVWDRTRFDGLTHVTDKEREALAALRGAGLSDVVPRPLKYD 198 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID V A+ + +++ D + +GK SDH Sbjct: 199 HPFTYWDYRELCFPKNRGMRID-LVYGNGAFADAVGDAY------VDREERKGKGASDHA 251 Query: 297 PISID 301 P+ +D Sbjct: 252 PVVVD 256 >gi|241204407|ref|YP_002975503.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858297|gb|ACS55964.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 263 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 97/309 (31%), Gaps = 76/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ D DIV LQE+ K Sbjct: 1 MKIATWNIN------------GVKAR----IDNLTQWLKDSDPDIVCLQEI-------KT 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + +A+ KN D +R Sbjct: 38 VDEGFPRLEI---EALGYHVETHGQKGFNGVAILSKNSPFEVNRGLPGDPLDEQARF-LE 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A L + + + V ++L + +++ + Y + + L+ + ++ Sbjct: 94 AAFTLS---DTRILRVCCLYLPNGNPVETEKYPYKLA------WMERLRTFAAERLAYEE 144 Query: 204 PFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSLI 235 V+AGD+N R++ LG D + L Sbjct: 145 MLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREAFRRLENLGLTDAL-RATTDATQLY 203 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 F + + N I ID+ ++ A + + + + ++ SDH Sbjct: 204 SF-WDYQAGAWPK---NNGIRIDHLLLSPEAADRMTSAAIEKHV-------RAWEKPSDH 252 Query: 296 CPISIDYDF 304 P+ +DF Sbjct: 253 VPVIAYFDF 261 >gi|84385765|ref|ZP_00988795.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01] gi|84379081|gb|EAP95934.1| hypothetical protein V12B01_12100 [Vibrio splendidus 12B01] Length = 347 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 43/232 (18%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ N L ++N + + ++LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAETIRSLDCDVIGFQEIFSPQSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQ--SYPLLGAK 134 ++ + + F + S ++ ++T IA R V LL A Sbjct: 67 EQLMNELGYPYFAVVD-----SAHVEDDYLYTSPVVGIASRYPIENVQPVTPDSKLLKAF 121 Query: 135 DSFSRAG-NRRAVELLVEING-KKIWVLDIHLKS---------FCFLDSLENTYSPSCSL 183 + NR V + + +H KS D+ + P Sbjct: 122 NLSDNFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPRTESVDSDNAQQGAKPQSDT 181 Query: 184 LSQ-QAQWLKDWI-----------------TQKKESLVPFVIAGDFNRKINY 217 L++ + L W+ + ++ P V+ GDFN+ + + Sbjct: 182 LTRFHQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPLFH 233 >gi|114320344|ref|YP_742027.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114226738|gb|ABI56537.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 575 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 80/264 (30%), Gaps = 47/264 (17%) Query: 68 IVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 IV L EM A+ + + R + +++I ++ R RV + Sbjct: 328 IVGLVEMENDRAALEDLVAALNDHLGADRYRAAPGTPDTGSDEIKVSLIYRPD--RVERV 385 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLL 184 PL + R + A G V +H K+ C DS + C L Sbjct: 386 GGPLRDLEPVHHRPPVKAAFRPAA--GGAPFAVAVVHHKAKVGC-PDSDDIDRGQGCWNL 442 Query: 185 SQQAQ------WLKDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDP 230 +QAQ + W + + +P +I GD N R + G D + + P Sbjct: 443 RRQAQSEALLEAIGRWREDRAD-DLPVLIVGDVNAYGGEDPVRALLAGGKRDLLARHLPP 501 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + +D+ + + I +E + Sbjct: 502 ERRYTYVFRGESG------------YLDHALAPPRLADRVQAAGTWAINADEPRLLEYDA 549 Query: 291 RL------------SDHCPISIDY 302 R SDH P+ +D Sbjct: 550 RGIERRFRPGPWRSSDHDPVWVDL 573 >gi|284033951|ref|YP_003383882.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813244|gb|ADB35083.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 293 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 89/327 (27%), Gaps = 65/327 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQ--------KVRLVSWNINTLSEQEGVSLWKNSVKRTTS 52 M+RK + + + + A +R+ ++NI + RT + Sbjct: 1 MVRKLAVLVAALTLLTGVTPAVADGNAPPVPLRVATYNI----HAGAGHDNVFDLDRTET 56 Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST--ERLINHSK------- 103 L DAD++ LQE+ + + + W S +RL + Sbjct: 57 TLRAL-------DADVIGLQEVD-VHWSER----SQWRDLVSELAQRLGMRAGFAPIYDF 104 Query: 104 ---RDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEINGKKI 157 R +AV + + V + L +D + +E +V+ G ++ Sbjct: 105 DPLRAGEPRRQYGLAVLSKAPILEVQNHNLTRLSTQDPGAGPTPMPGFLEAVVQAKGARL 164 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 HL + + L I + V+ GD N + Sbjct: 165 HFYVTHLD---YRADPSLRRTEVDETLK---------ILADDPAGANQVLVGDLNAE-PQ 211 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 W + + + IDY + + S Sbjct: 212 AAELARLWPAMTDAWTAAPITTGNPLT-YPAATPVKR--IDYITVSDGVGVLRAEVPASP 268 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 L SDH P+ D Sbjct: 269 ALLAA----------SDHRPVVADLAL 285 >gi|307609276|emb|CBW98745.1| hypothetical protein LPW_05491 [Legionella pneumophila 130b] Length = 251 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGS--YNAVAKVF--PKNTWCIFYSTERLINH--SKRDSNNDI 110 +R L+ D VFLQE+ ++ P + C + + ++ +K Sbjct: 31 MRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSG 90 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K +S L S +R + ++++ I +L +HL F Sbjct: 91 HHGNAILSKYPFESFESINL-----SNMNRASRGILHTQLKLDNNIIHLLCVHL--GLFK 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L I P ++AGDFN Sbjct: 144 AERT-----------EQCKALIQRIKDVVPKNEPLIMAGDFN 174 >gi|194291703|ref|YP_002007610.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|193225607|emb|CAQ71553.1| putative Endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 614 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 92/330 (27%), Gaps = 58/330 (17%) Query: 14 VPCTASVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------D 65 A +R+ ++N+ + R D L + L D Sbjct: 295 AAPQRHPATALRVAAFNLQNYFNGDGQGGGLDAPGNRGAQDAAALARQQAKLVAALRGLD 354 Query: 66 ADIVFLQEM-----GSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 AD++ L E+ G A+ ++ W + + AIAV Sbjct: 355 ADVIGLMEVQNNGYGPTGAIRQLAAMLGPDWRVADPGSAALGTD----------AIAV-- 402 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS-FCFLDSLEN 175 + + + P ++ +R+ + G + V+ H KS C + Sbjct: 403 GLLFNARTALPAGRVATTWVGERSRQPLAATFRAATGGAPVTVVVNHFKSKNCVEAAGAQ 462 Query: 176 TYSPS---C--SLLSQQAQWLKDWITQKKESLVP--FVIAGDFNRKINYLGNNDDFWKTI 228 C Q A L W+ + ++ GD +N D + + Sbjct: 463 ADQRDGQGCWNPARVQAADNLARWLATAPTGVADAGVLVIGD----LNSYAMEDPI-RLL 517 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + +D+ + D A ++ I +E S Sbjct: 518 ARRGYADLVARFAGPHAYSYVYAAQAGYLDHVLGDATAAAHVVAVQAWHINADEPAALSY 577 Query: 289 G----------------KRLSDHCPISIDY 302 R SDH P+ +D+ Sbjct: 578 APAPGSRAAPAFYAPDPYRSSDHDPLVVDF 607 >gi|90420403|ref|ZP_01228310.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans SI85-9A1] gi|90335131|gb|EAS48884.1| endonuclease/exonuclease/phosphatase [Aurantimonas manganoxydans SI85-9A1] Length = 248 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 65/204 (31%), Gaps = 43/204 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK-RTTSDYTLLRQYAKNLDADIVFLQEM 74 + +R V+WN + + RT L A L DI+ LQE+ Sbjct: 8 PGTAERGVIRAVTWN-----CHGSIGADRRCDPDRT------LATIA-RLGPDILALQEV 55 Query: 75 GSYNAV---AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + + F + + I ++ D +L +P++ Sbjct: 56 DGRSHLGRRQRAFETLGQELLKTAGSQIVEARTVPREDRDYG--------HLLWSRWPIV 107 Query: 132 GAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 A R A+E +V + VL HL L + QA Sbjct: 108 SATIHTLPEPGVEPRAAIEAVVAAPSGHLRVLAFHL-------GLLRRQRRA------QA 154 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 Q+L + + + VP + GD N Sbjct: 155 QFLAERVDAR---DVPTLAMGDGN 175 >gi|120610134|ref|YP_969812.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] gi|120588598|gb|ABM32038.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] Length = 258 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 ++L +WN+N+LS R L + D + LQE V + Sbjct: 1 MKLATWNVNSLSI------------RLPQVLAWLAD-----NPVDAIGLQE---LKLVDE 40 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + + +A+ + + G +D+ +R Sbjct: 41 KFPHDAFE-------SAGYHAVSFGQKTYNGVAILSRTPVRDVVRN-IPGHEDTQARV-- 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ + ++ + + T + +L L W+ ++ + Sbjct: 91 ---IAATLDTPQGPLRFINCYFVNG----QAPGTEKFAYKMLW--LAALHRWVREELLAH 141 Query: 203 VPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSR 244 V+ GDFN I++ ++++ D+ F + + S Sbjct: 142 PRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAYRMFEQPEKSF 201 Query: 245 CN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + + D + + SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254 Query: 300 IDY 302 Sbjct: 255 ATL 257 >gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB102] gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] Length = 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|54293461|ref|YP_125876.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens] gi|53753293|emb|CAH14740.1| hypothetical protein lpl0510 [Legionella pneumophila str. Lens] Length = 257 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGS--YNAVAKVF--PKNTWCIFYSTERLINH--SKRDSNNDI 110 +R L+ D VFLQE+ ++ P + C + + ++ +K Sbjct: 37 MRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSG 96 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K +S L S +R + ++++ I +L +HL F Sbjct: 97 HHGNAILSKYPFESFESINL-----SNMNRASRGILHTQLKLDNNIIHLLCVHL--GLFK 149 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L I P ++AGDFN Sbjct: 150 AERT-----------EQCKALIQRIKDVVPKNEPLIMAGDFN 180 >gi|257468819|ref|ZP_05632913.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|317063071|ref|ZP_07927556.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|313688747|gb|EFS25582.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] Length = 285 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 123/327 (37%), Gaps = 72/327 (22%) Query: 4 KYVLALVFFLVPCTASVAQK--------------VRLVSWNINTLSEQEGVSLWKNSVKR 49 K LAL+F ++ S A+ ++++++NI V Sbjct: 2 KKALALLFVIL-SVVSFAETKVLYNKKITKNNPKMKIMTYNI-------AAGANNFKV-- 51 Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKVFPKNTWCIF--YSTERLINHSKRDS 106 D + + K ++ DIV +QE+ + N K+ + I + ++ D Sbjct: 52 ---DLKVTAETIKKVNPDIVAIQEVDRNTNRSGKI---DQAQILADLTGYNMVFGKTIDH 105 Query: 107 NNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRA-GNRRAVELLVEING--KKIWVLD 161 + + IA+ K+ + QQS P D+ S R A+ +E+ G I ++ Sbjct: 106 DGGDY-GIAILSKHPILSQQSLILPSFPNGDTTSPGYEQRIALITQIEVPGFEVPITFIN 164 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLGN 220 HL D E+ QQ + + + + + ++AGDFN +N + Sbjct: 165 THL------DWHEDPAVR-----LQQIRTINEITLDMRGIK----ILAGDFNDTVNSVIG 209 Query: 221 N--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 + +W ++ + + D R N + ID +++ + E+ + + Sbjct: 210 KEMERYWVSVFDD--------KIDHRTWPAVNPE--VAIDQIYLNKAQ----VWEAKTYV 255 Query: 279 LYNEDDIKSRG-KRLSDHCPISIDYDF 304 E++ ++SDH P+ +D Sbjct: 256 PNKENEKDGIQWNKVSDHIPVIVDLKL 282 >gi|254505117|ref|ZP_05117268.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222441188|gb|EEE47867.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 324 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 93/289 (32%), Gaps = 54/289 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 ++L ++N+ + ++ + R LR L+ADI+ LQE+ + Sbjct: 1 MKLATFNLE---SFGTDRIDEDLLARR---IDALRPKLLELEADILCLQEVNAQKIKGQS 54 Query: 80 ------VAKVFPKNTWC-IFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + ++ + F S N + + V + + P Sbjct: 55 SRQFHDLKRLIEGTPYQDFFMSGSLRPSGKGPGDRHNLVVLSRYPVLSGESLYHRHAEPP 114 Query: 131 L--------GAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKS-------FCFLDSLE 174 L G + + A +R +L +++ G+ + V ++HL++ Sbjct: 115 LWRPGTADPGYDEPQATAFDRPVQQLQIDLGTGRPLHVFNVHLRAPIAAQIRGGKDAEHN 174 Query: 175 NTYSPS------CSLLSQQAQWLKDWITQKK---ESLVPFVIA-GDFNR-------KINY 217 + S+L Q AQ L+ + + E +I GDFN ++ Sbjct: 175 WASVSAWAEGYHLSVLKQTAQALELRLGAEALFDEDPEAQIILTGDFNATGETRALRLLR 234 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQN 265 +D + L + + + +D+ + ++ Sbjct: 235 ADPHDTGVPDL-GYRQLYQLDAALPLEQRKTVLHKGRAQTLDHVLASRS 282 >gi|148360915|ref|YP_001252122.1| endonuclease/exonuclease/phosphatase family transporter protein [Legionella pneumophila str. Corby] gi|296106019|ref|YP_003617719.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila 2300/99 Alcoy] gi|148282688|gb|ABQ56776.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila str. Corby] gi|295647920|gb|ADG23767.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila 2300/99 Alcoy] Length = 251 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGS--YNAVAKVF--PKNTWCIFYSTERLINH--SKRDSNNDI 110 +R L+ D VFLQE+ ++ P + C + + ++ +K Sbjct: 31 MRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSG 90 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K +S L S +R + ++++ I +L +HL F Sbjct: 91 HHGNAILSKYPFESFESINL-----SNMNRASRGILHTQLKLDNNIIHLLCVHL--GLFK 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L I P ++AGDFN Sbjct: 144 AERT-----------EQCKALIQRIKDVVPKNEPLIMAGDFN 174 >gi|148654820|ref|YP_001275025.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] gi|148566930|gb|ABQ89075.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] Length = 348 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 53/259 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +S R++++NIN +RT +R DI+ LQE+ Sbjct: 105 FSSQGAPFRVMTFNIN------------GGNERTDRVLAAIRA----AQPDIIALQELNP 148 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRKKNVRVLQQSYPLLGAK 134 A A L N + T + + R + Sbjct: 149 SIAAAL------------ERDLKNEYPYQLLDPQWGVTGMGI---ISRFPLRPLAARLPG 193 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D + A + ++ G+ I +L+ H + + +QA+ + + Sbjct: 194 DRWIGAPQ----AVEIDTPGQTITLLNFH---AIPPVGPSEYMTAAIGERERQAEAINAF 246 Query: 195 ITQKKESLVPFVIAGDFN----RKINYLGNN---DDFWKTIDPNDSLIRFPKEKDSRCNA 247 + ++ P V+AGD N + ++ + D W+ Sbjct: 247 VQAQRT---PVVVAGDMNATPFHRAYHILEHGALSDVWRECGSGAGFTWPGNRTIGGVPV 303 Query: 248 NKNLRNKIPIDYFVMDQNA 266 + ID+ Sbjct: 304 LPWF---VRIDHLFTTNGI 319 >gi|117920043|ref|YP_869235.1| PKD domain-containing protein [Shewanella sp. ANA-3] gi|117612375|gb|ABK47829.1| PKD domain containing protein [Shewanella sp. ANA-3] Length = 948 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 109/337 (32%), Gaps = 54/337 (16%) Query: 15 PCTASVAQK--VRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDA 66 P + +A+ +++ S+N +N + G T S++ + + A Sbjct: 449 PQSPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKAKIVSAMVGTSA 508 Query: 67 DIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 D+ L E+ + + +N + N S ++ I + Sbjct: 509 DVFGLMEIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGL 567 Query: 115 AVR------KKNVRVLQQSYPLLGAKDS--FSRAGNRRAV--ELLVEINGKKIWVLDIHL 164 R + + R+L + L F + NR + ++ + + + V HL Sbjct: 568 IYRSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFVLNGSEESVVVAVNHL 627 Query: 165 KSF---CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KI 215 KS C D N +C+ ++ A WI ++ ++ GD N + Sbjct: 628 KSKGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAEQYPE-QGVLLIGDLNSYAKEDPL 686 Query: 216 NYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--------YFVMDQN 265 + L N + + ++ + + + L N +D + D+ Sbjct: 687 SALANAGFSELFAKLEKANPYSYVFSGESG--QLDHALANTALVDKVVDVTEWHINTDEP 744 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E F +D S R SDH P+ I Sbjct: 745 -RVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|320168591|gb|EFW45490.1| hypothetical protein CAOG_03474 [Capsaspora owczarzaki ATCC 30864] Length = 397 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 112/355 (31%), Gaps = 102/355 (28%) Query: 23 KVRLVSWNINTL--------SEQEGVSLWKNSVKRTTSD--------------------- 53 ++R+ S+N L +E + K S + + SD Sbjct: 68 RLRVASFNAEWLFLGQLAPTGARESGTDDKRSSQSSDSDVHRRGAISCPGDCTWTTPQEA 127 Query: 54 ---YTLLRQYAKNLDADIVFLQEMGSYNAVAKVF---PKNTWCIFYSTERLINHSKRDSN 107 + + + K+++ADI+ L E+ + + + P + + + D+ Sbjct: 128 VQHFDRVVKVLKDVNADIINLVEIENCTILYYLVNALPGFGYKPYL-------ITGTDTA 180 Query: 108 NDIHTAIAVRKKNVRVLQQS-----YPLLGAKDSFSRAGNRRAV---ELL-VEINGKKIW 158 + I R + + YP+ G + + + A V L +IN KK+ Sbjct: 181 TGQNVGILTRVDPYMAMTRDESRQNYPVPGTQCAAATASGTTGVSKHYLTAFQINNKKVG 240 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 ++ +HL S + + +C QA ++ + + GDFN Sbjct: 241 MMGLHLLSQPW-------QAENCRKREAQALVARNAADTILAGVDELIFLGDFN------ 287 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--------------RNKI--------- 255 + D I + R + + N + R Sbjct: 288 -DYDGTVLDIAGSVPTSRTLEYLKTPINPSTAHLALSNVASHVPLENRYTSWWDKDNSCV 346 Query: 256 --------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ ++ + +L++ + + +SDH P+ +D+ Sbjct: 347 DEGGDEHTSIDHMLVSAG-----LAAGIQNVLFDHEFVACCQC-VSDHWPVVVDF 395 >gi|313887293|ref|ZP_07820984.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923212|gb|EFR34030.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 360 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 101/358 (28%), Gaps = 73/358 (20%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTT 51 R +VL + Q+ +VS+N+ L + + W + + +R Sbjct: 20 RGFVLFFLLLGSGYCLVAQQRFTIVSYNVENLFDTIPSTRWDDREYLPTARKGWTAERMK 79 Query: 52 SDYTLLRQYAKNLDA-DI---VFLQEMGSYNAVAKVF------PKNTWCIFY--STERLI 99 L + + A DI + LQE+ S A+ ++ N I S R Sbjct: 80 RKCHQLAEVISHATAWDIPALLALQEVESVEALEQLAHHTLLRGGNYKTICATGSDRRGS 139 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIW 158 + + + AV + + +PL D + L + + Sbjct: 140 HVALLYDADR----FAVEQT------EEWPLRITPDSIYPTRNLLFVSGRL--PSAAPLS 187 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 + HL S + E + +L + L + V+ GDFN Sbjct: 188 FIVCHLPSRRGGATAEAARAALIEMLRMRTDSL-----LRANPEQSIVVVGDFNATPEDG 242 Query: 219 GNNDDFW---KTIDPNDSLIR------FPKEKDSRCNANKNLR--NKIPIDYFVMD---- 263 + + +DSL F E+ ID + Sbjct: 243 LTDSWAASYHTYLSQSDSLAMVDLTPPFTDEQLKTMPPGSYYYRGYWERIDRLFVSRTLL 302 Query: 264 -QNAYKFLIQESFSEILYNEDDI----------------KSRGKRLSDHCPISIDYDF 304 + Y L E+ L + + S SDH P+ + Sbjct: 303 TETRYPHLELETVRIALPPQKYMHESPAPWGRPRRTYGGDSYLAGPSDHLPLVATLLY 360 >gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 259 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 94/309 (30%), Gaps = 78/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE + Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQET---KCTEEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP E +N S R + +AV + L GA D R Sbjct: 42 FPAAQLR-ELGYESAVNASGRWN------GVAVISRVGLDDVVRG-LPGAPDYEGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + L +T + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVAHDHYGYK------LRWLEALSVAVTDDAAAGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFW-------------------KTIDPNDSLIRFPKEKDSR 244 PF + GDFN +DD W + + P+ Sbjct: 143 PFAVLGDFN----IAPTDDDVWDPSFFDGMTHVTPPERAALEALRKRGLADVVPRPLKYE 198 Query: 245 CNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID V + +++SF D + +GK SDH Sbjct: 199 -HPFTYWDYRQLCFPKNRGMRID-LVYGNEPFTAAVKDSF------VDREERKGKGASDH 250 Query: 296 CPISIDYDF 304 P+ +D D Sbjct: 251 APVVVDLDM 259 >gi|255327369|ref|ZP_05368443.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] gi|255295649|gb|EET74992.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] Length = 291 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 79/279 (28%), Gaps = 57/279 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + + D DI+ LQE+ + +A+ + + ++ W I ++ + Sbjct: 33 MAAWLASRDIDILCLQEVRAPDAIVRELLDESQWHILHAEAAAKGRAGVLVATR------ 86 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 R N + + + R V NGK + V+ ++ S Sbjct: 87 -RTPNSAGELLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLTVVSAYVHSGEVGT 145 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------- 223 ++ + + L +I GD N L + Sbjct: 146 QKQDDKYRFLERMLVRMPELAK-------HSDHVLIVGDLNVGHTELDIKNWKANQKRAG 198 Query: 224 -----------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMD 263 F+ I D + + IDY Sbjct: 199 FLPEERAYFDRFFGDIGYRDVARELAGQVPG---PYTWWSYRGKAFDNDAGWRIDY---- 251 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 A L + + ++ D S +R SDH P+ +DY Sbjct: 252 HMATPALAESAVEAVV---DRAASYDERFSDHAPLVVDY 287 >gi|54296503|ref|YP_122872.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris] gi|53750288|emb|CAH11682.1| hypothetical protein lpp0534 [Legionella pneumophila str. Paris] Length = 257 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGS--YNAVAKVF--PKNTWCIFYSTERLINH--SKRDSNNDI 110 +R L+ D VFLQE+ ++ P + C + + ++ +K Sbjct: 37 MRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSG 96 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K +S L S +R + ++++ I +L +HL F Sbjct: 97 HHGNAILSKYPFESFESINL-----SNMNRASRGILHTQLKLDNNIIHLLCVHL--GLFK 149 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L I P ++AGDFN Sbjct: 150 AERT-----------EQCKALIQRIKDVVPKNEPMIMAGDFN 180 >gi|251779644|ref|ZP_04822564.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083959|gb|EES49849.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 258 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 48/292 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N L + +R + ++ +Y + DI+ QE A K+ Sbjct: 1 MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVINKY----NCDIIGTQE-----ATKKM 48 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 F + I T +I + + I + KK+ + +++ L + + R+ Sbjct: 49 FKDISDNI--ETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWY 106 Query: 144 R------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT- 196 ++ N K+I + + HL FL Y + + L ++I Sbjct: 107 SMFPRICTTAIVELENSKRIRICNSHLD---FLLPQARAY---------ELKKLSEFIKK 154 Query: 197 QKKESLVPFVIAGDFNRK-----INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++++ +P +I GDFN I N D F K + + K + N KN Sbjct: 155 EQEKEELPLIIMGDFNSNPNSKLIKEFINGDVFNKRLVAVQDKKKELYNKATMGN-FKNK 213 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDY + + + YN + GK SDH P+ + Sbjct: 214 EKGSHIDYIFVSEEFEII----DVEIVKYNVN-----GKYPSDHYPLMAEIS 256 >gi|289580690|ref|YP_003479156.1| endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099] gi|289530243|gb|ADD04594.1| Endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099] Length = 261 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 73/263 (27%), Gaps = 47/263 (17%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF--------YSTERLINH 101 + L + D+V L E+ + + + + + + Sbjct: 36 ERQAFRRLVSLIERERPDVVSLLEVD--RGSHRTITDGQFQTLRDSLQRRGLAYDGDVAN 93 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 DS + N + + + S R +E+ + + + + Sbjct: 94 KYGDSGLVQSLPFFGQLGNAVLSRANRNRTIVPHYLSAGRKRLVLEVELAAD---VVLFM 150 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HL +Q L I + V+ GDFN Sbjct: 151 VHLSLGTRSRG-------------RQLAELATLIRDR-AGGREVVVTGDFN--------- 187 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 T D L F + + + + D+ V ++ F S Sbjct: 188 -----TFAATDELHEFTDQAALELQVPGETVPARPFDDWLVGSRSLDLFCCSPSLDVGRC 242 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + D+ +LSDH PI ++ D Sbjct: 243 DVLDV-----QLSDHRPIVLELD 260 >gi|317478482|ref|ZP_07937642.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905371|gb|EFV27165.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 98/310 (31%), Gaps = 49/310 (15%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +L L +A Q + ++++N+ + V+ W R ++ Y Sbjct: 13 ILLLGSCKSQPSAQNGQPLEVMTFNVRLDIPSDSVNNWNY---RKGDACRMIAYY----S 65 Query: 66 ADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKR----DSNNDIHTAIAVRKK 119 D++ +QE+ + + P + + D T V Sbjct: 66 PDLLGMQEVLHNQMEDLKRGLP--QYTALGVGRDDGKEAGEYCPIFFRTDRFT--LVEYG 121 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177 N + +Q P + + NR +++ NG+K + HL D+ T Sbjct: 122 NFSLSEQ--PETIGIKGWDASYNRVTTWAILQEKNNGQKFVYFNTHL------DNDGKTA 173 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 L L I + +P +I GDFN ++ +T++ Sbjct: 174 RKEGVQL-----ILDK-IKE-IAPDMPAIITGDFN-----CTPGEEPLQTLEKGG----- 216 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL----IQESFSEILYNEDDIKSRGKRLS 293 E ++ A + D+ + L + + Y K LS Sbjct: 217 -MENAAKTAAVTYGPSWSFHDFGRLPVEERVLLDYVFVTKGAKIDRYRVIQDKPENSYLS 275 Query: 294 DHCPISIDYD 303 DHCPI ++ Sbjct: 276 DHCPILVELT 285 >gi|52840714|ref|YP_094513.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627825|gb|AAU26566.1| endonuclease/exonuclease/phosphatase family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 257 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGS--YNAVAKVF--PKNTWCIFYSTERLINH--SKRDSNNDI 110 +R L+ D VFLQE+ ++ P + C + + ++ +K Sbjct: 37 MRDAIAGLNPDFVFLQEVQGKHRKREKRIVSWPDSPQCEYIAENIWPHYVYAKNAVYQSG 96 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K +S L S +R + ++++ I +L +HL F Sbjct: 97 HHGNAILSKYPFESFESINL-----SNMNRASRGILHTQLKLDNNIIHLLCVHL--GLFK 149 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q + L I P ++AGDFN Sbjct: 150 AERT-----------EQCKALIQRIKDVVPKNEPLIMAGDFN 180 >gi|83746623|ref|ZP_00943673.1| dioxygenase [Ralstonia solanacearum UW551] gi|207727912|ref|YP_002256306.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|207742318|ref|YP_002258710.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] gi|83726757|gb|EAP73885.1| dioxygenase [Ralstonia solanacearum UW551] gi|206591154|emb|CAQ56766.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|206593706|emb|CAQ60633.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] Length = 248 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 24/156 (15%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F + + Y + H+ + + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F S + Sbjct: 93 MSRYPILLSEN---LDISDH--RFEQRGLLHAVTDLGFGEVHLLCAHF--GLFARSRQ-- 143 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +QA+ L + + + VP V+AGDFN Sbjct: 144 ---------RQAEALIERVRSVVPTDVPLVVAGDFN 170 >gi|239814644|ref|YP_002943554.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239801221|gb|ACS18288.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 261 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 97/306 (31%), Gaps = 74/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +++ +WN+N+L+ L+ L A D++ LQE Sbjct: 1 MKIATWNVNSLT-------------------ARLQHVLDWLIANPVDVLCLQE------- 34 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + +A+ + G D SR Sbjct: 35 ---LKMSDDKFPLDVLKSAGYEAAVFGQKTYNGVAILSLAPMRDVARN-IGGFTDDQSRV 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + VE + +++ + + + + Y + L++W+ + Sbjct: 91 -----IAATVETPAGPLRIVNGYFVNGQAPGTDKFEYK------MGWLRALREWLRAEMA 139 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKD 242 + V+ GDFN I++ + +K + DS F + + Sbjct: 140 AHPNLVLLGDFNIAPEDRDSFDPVGLAETIHHTTEEREHFKALLQLGLVDSFRLFEQPEK 199 Query: 243 SRCNAN----KNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 S + +N+ ID+ ++ + L+ D + + ++ SDH P Sbjct: 200 SFSWWDYRMLGYQKNRGLRIDHILVSEP----LVP---RVKGCIIDRVPRKWEKPSDHAP 252 Query: 298 ISIDYD 303 + +D D Sbjct: 253 VVLDLD 258 >gi|254441056|ref|ZP_05054549.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198251134|gb|EDY75449.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 333 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 103/342 (30%), Gaps = 74/342 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTT--------SDYTLLRQYAKNLDAD-IVFLQEM 74 +++ ++N+ S + R + T L LDAD I+ ++ Sbjct: 1 MKIATYNVEWFSNLFDNAGKLYDDDRWSGRWDVTRAQHTTALGAVFAALDADGIMVIEGP 60 Query: 75 GSYN------------------AVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTA 113 S+ A V I + + + + + D D Sbjct: 61 DSHAKRDGAAALEGFAARFGIRARQAVIGYVNDTQQEILFLYDPDVLNVRHDPRIDG--- 117 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A R L +S+ +E+ I+G ++ +H KS + Sbjct: 118 -APRFDGAIKLDLDVDAQPDDVRWSKPPLE--LEVT-HISGTVFRLIGVHAKSKAPHGAK 173 Query: 174 ENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRKINY----------- 217 + S+ ++ Q WL+ + + + ++ GDFN Sbjct: 174 TDAQVMRISIENRRKQLAQCIWLRRRVEAQLAAGDNLIVLGDFNDGPGLDEYEKLFGRSG 233 Query: 218 ------LGNNDDFWK-----TIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQN 265 G + + + +R + R +DY ++ Q+ Sbjct: 234 VEIVLGEGQGEQLFDPHARMALSQQIGAAPVT----ARFTVGPDRRFLSALLDYIMVSQS 289 Query: 266 AY----KFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDY 302 K++I F + + + D+ + SDH P+ +D Sbjct: 290 VRAMGAKWVIMHPFDDPKCFADKDLCAALLTASDHFPVVLDI 331 >gi|167909082|ref|ZP_02496173.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 112] Length = 270 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 54/243 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + VA ++ VSWN++ G + W +R + + AD+ FLQE Sbjct: 9 LAEPLPVADEITAVSWNLHKGRSPLGFTAW-----------EAMRSWVVSTHADVYFLQE 57 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-----------------V 116 A+A+ P+ + + D + T IA Sbjct: 58 -----AMARRMPRP--VLAAGFGAPMAEPVDDIWHCQATEIARALDWQIALGPNVFKPSW 110 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE 174 R N + L G D + RR + + G + +L HL Sbjct: 111 RHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGGAPVTLLCAHL---------- 160 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + L +Q W+ WI + + P V+AGDFN ++ ++ + I ++ Sbjct: 161 -ALTRAARL--RQMHWIAHWIERNARTG-PLVLAGDFN---DWRNDSIPLFGEIGLSEVA 213 Query: 235 IRF 237 Sbjct: 214 TLL 216 >gi|160900429|ref|YP_001566011.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] gi|160366013|gb|ABX37626.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] Length = 258 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 92/306 (30%), Gaps = 76/306 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +++ +WN+N+LS L Q L A D + LQE Sbjct: 1 MQIATWNVNSLS-------------------VRLPQVLAWLQANPVDALALQE------- 34 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR 139 + + + +A + + VR + ++ P L + + Sbjct: 35 ---LKLTDDKFPLQALQEAGYHAVSHGQKTYNGVAWLTRTPVRDVVRNIPGLDDEQARII 91 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A ++ G + +++ + + T + + Q L+DW+ + Sbjct: 92 AA-------TLDAEGGPVRLINGYFVNG----QAPGTDKFAYKMRWLQ--ALQDWVKSEM 138 Query: 200 ESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEK 241 V+ GDFN I++ ++ + D+ F + + Sbjct: 139 AIHPRLVLVGDFNVAPEDRDSYDPIGLKDTIHHTVEERTHFQALLQLGLTDAFRMFDQPE 198 Query: 242 DSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S + ID+ ++ + + S D + + SDH Sbjct: 199 KSYSWWDYRMLGFQKNRGLRIDHILVSEALRPSVSACSV-------DRAPRKNPQPSDHA 251 Query: 297 PISIDY 302 P+ + Sbjct: 252 PVVVTL 257 >gi|33239934|ref|NP_874876.1| exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237460|gb|AAP99528.1| Exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 276 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 100/304 (32%), Gaps = 67/304 (22%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 +WN+N RT + + ++ D++ LQE + + Sbjct: 3 FATWNVN--------------SIRTR--LSQVEEFLDETQPDLLCLQETKVEDKLFPRES 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 K + + + ++ N SN + ++R+ + +F R Sbjct: 47 IEKRGYQVSFYGQKAYNGVALISNQKL--------DDIRLGISGELVNNQVSTFLDEQKR 98 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ I V+++++ + LDS + Y + LK + ++E Sbjct: 99 IISALI-----NGIRVVNVYVPNGSSLDSEKYIYK------LKWLDHLKKYFESQEERSE 147 Query: 204 PFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEK--------DSRCNANK 249 P + GDFN + ++ ++ ++L + ++ Sbjct: 148 PLCLMGDFNIVLEEKDIHNPKRFNNGIMASLSEREALQNVLGTRLEDVFRLFEADTGHWS 207 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ + + LI + S +++ + + SDH P+ + Sbjct: 208 WWDYRSGAWQKDQGWRIDHIYLSE----ELINNARSCVIHKK---ARGNIQPSDHAPVLV 260 Query: 301 DYDF 304 D ++ Sbjct: 261 DINW 264 >gi|121602111|ref|YP_988433.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614288|gb|ABM44889.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 271 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 104/305 (34%), Gaps = 66/305 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 R+ +WNIN++ + + + +Y + DI+ LQE + +F Sbjct: 4 RIATWNINSIRFR----------------FEQVLRYLELCAPDILCLQET---KCLDNLF 44 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P+ +F S + + +A+ + V + + + R Sbjct: 45 PR---EVFLS---AGYKHIALNGQKAYHGVAILSRLPFVSVE------KRFFCQKEECRY 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV- 203 + ++V+ + I + + ++ + D + + + +L++ + + + Sbjct: 93 -LSVVVKPYQQAIRIHNFYVPAG--GDEPDVQVNE---KFRHKLDFLEEMSSIRADQGDG 146 Query: 204 -PFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRCNANKN-----LRNK 254 ++ GD +N DD W + ++ + + C+ ++ Sbjct: 147 LSSLLMGD----LNIAPLEDDVWSHKQLLNVVSHTPIETERLKALCHEGGWVDLMRMKFP 202 Query: 255 IPI-----------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR----LSDHCPIS 299 +PI D+ + D+ I S + ED R R SDH P+ Sbjct: 203 VPIKLYTWWSYRARDWALADRGRRLDHIWSSPDLAPFVEDLSIFREARGWSKPSDHVPVQ 262 Query: 300 IDYDF 304 ++F Sbjct: 263 SVFNF 267 >gi|288928925|ref|ZP_06422771.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329909|gb|EFC68494.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 298 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 58/292 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76 VR++++N + + T+D+ K L+ D+V +QE+ S Sbjct: 54 VRIMTYNCFYCKSNTSNKTFSDEH---TADFAK---VIKALNPDVVVIQELDSGTTERAK 107 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + + + F S + + +++ Sbjct: 108 RYLLDDIRRATGLDYDLFFGSAAPYSEG---------------KIGPGVLYKRAMQPTSI 152 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K RA+ +L + +L HL D S +++ + L Sbjct: 153 KKVALPGKETRALMVLTFP---RFTLLGTHL------DLDATARKTSAEIVNHELTTLAT 203 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 P AGD N + WK +I + + + Sbjct: 204 ---------QPVFFAGDLN--------DSPSWKPELTAFPIITKAFDIITPQTGTSVDQP 246 Query: 254 KIPIDYFVMDQNAY-KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY ++D+ + ++ + + +SDH P+ +D F Sbjct: 247 NETIDYILVDKAHKGAVKVVQTAVVKQLEINGKVTETGTISDHFPVFVDVRF 298 >gi|223996013|ref|XP_002287680.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976796|gb|EED95123.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 453 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 94/296 (31%), Gaps = 51/296 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A + +VSWNI S + L N R+ L+R D++ LQE N Sbjct: 33 ALSLSVVSWNI---SSAQPSQLAPNIALRSQRAPGLIRDECIRSLPDVIALQETSHPNQG 89 Query: 81 AKVF--PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +F + ++ +H+ + + V+++ L + Sbjct: 90 TDMFGTGSTGYSYVSIGTQVAHHTAE------YVDLLVKRE-----------LYSHCQTI 132 Query: 139 RAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 N AV + NG +I V +HL C + + I Sbjct: 133 NLQNLPAVAATINLPNGTRIAVASLHLP---HTSQAAPERKRMC-------EAIMKGIVS 182 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFPKEKDSRC-NAN 248 + + + ++ GDFN + + WK + +D F + Sbjct: 183 QVGNNI--ILLGDFNMRKAEDKPTEGLVGGGWMDAWKVVTNSDKSRNFTWNSHDNLYHGP 240 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILY-NEDDIKSRGKRLSDHCPISIDYD 303 N + D Y + + E + ++ +G LSDH +++ D Sbjct: 241 DNFQFTCRFD------RCYARGAKLALREFQLIGNNTVEGKGDYLSDHFGLAVRLD 290 >gi|269966663|ref|ZP_06180742.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B] gi|269828730|gb|EEZ82985.1| hypothetical protein VMC_21720 [Vibrio alginolyticus 40B] Length = 320 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 93/308 (30%), Gaps = 30/308 (9%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---RQYAKNLDADIVFLQE 73 T S ++ V+ N+ ++ L ++ + L+ D++ LQE Sbjct: 3 TLSQPSRITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQE 62 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132 + S F + F + + + + AIA R +V + L Sbjct: 63 VFSIEETQAFFSTIGYPYFATVDT-PHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATL 121 Query: 133 ---AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--SLLSQQ 187 + ++ I V HLKS DS + S + LS Q Sbjct: 122 EPFGVSVVPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQ 181 Query: 188 -----AQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLI 235 A L+D + ++ ++ +P V+ GD N+ I + N + Sbjct: 182 QRGWEAAMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDGW 241 Query: 236 RFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDD------IKS 287 + +DY ++ Q + Y + I Sbjct: 242 LLQSAPLKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYD 301 Query: 288 RGKRLSDH 295 R K SDH Sbjct: 302 RDKNASDH 309 >gi|160884084|ref|ZP_02065087.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] gi|156110426|gb|EDO12171.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] Length = 611 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLIFVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + ER H+ I + Sbjct: 53 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + HL E Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYCCT----------HL------SLTEGDRM 152 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S + +K I P +AGD N DF K + + ++ P Sbjct: 153 KS-------LEIVKSLI---ASYKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ K IDY + + S + SDH PI Sbjct: 198 EKHTYPA-----PDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|237749180|ref|ZP_04579660.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] gi|229380542|gb|EEO30633.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] Length = 264 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 60/300 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++NI +G S+ + L++ ++L AD++FLQE+ + + Sbjct: 2 ELRIATYNI-----HKGASIDHRPI------IQELKRSIRSLGADVIFLQEVQGRHDLQ- 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG- 141 N + + + H+ + + ++ A + LL S+ Sbjct: 50 ---VNRQALLWQEQ--GQHA-YLAGDSLYCAYG-KNSVYNYGHHGNALLSTYPIVSQFNQ 102 Query: 142 --------NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +R + +++ K++ IHL F S +Q + L Sbjct: 103 DVSDHALESRGILHCVLQTPETKVYCYVIHL--GLFNGSRI-----------RQTRALIR 149 Query: 194 WITQKKESLVPFVIAGDFN-----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + P +IAGDFN R + D+ + N FP+ Sbjct: 150 TVQASAPKDAPVIIAGDFNDWNNKLSGFLMRTLQVKEVFDEL--DMKQNGKRSYFPRLTG 207 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +F +D+ + +S S + S LSDH P+ Sbjct: 208 QVPKPVAARTFPALFPFFRLDRIYVRGFEVDSASVMQ------GSPWTSLSDHAPLVASL 261 >gi|291614973|ref|YP_003525130.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] gi|291585085|gb|ADE12743.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] Length = 271 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 95/297 (31%), Gaps = 61/297 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P S+ + R++ +N+ G + D L ++ DADI+ LQE+ Sbjct: 9 PDHVSLMSRFRVMQFNMQ-----FGQIWDEAEGDHAPIDLDLTIAEIQSHDADIIILQEV 63 Query: 75 G--SYNAVAKVFPKNT---------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 V P N + ++S + R+ I AI R Sbjct: 64 EHAQPGGVQLQPPPNYTRLKAAFRGYDSYFSYPKADP---RELPFGIGLAIFSRTPLRDT 120 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTYSP 179 + P + F LL+ ++G+++ + + HL ++ L+S + Sbjct: 121 FRMELPSSPVEFEFDGKKRTPTDRLLIGAKTTLDGQEVQLFNTHLLAYFMLNSSSEQH-- 178 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 QQ Q + + Q ++S P +I GDFN + N D Sbjct: 179 -----LQQRQLV---VEQLRKSTGPTLIGGDFN-----VSNRDSLVHQFADAGYQPVQTT 225 Query: 240 EKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 E R + + D+ + + Y K+ SDH Sbjct: 226 EV--------TWRYRPFVLDHIFHSPH---------LQSVRYTVKPTKA-----SDH 260 >gi|118589109|ref|ZP_01546516.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118438438|gb|EAV45072.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 260 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 87/305 (28%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R + L++ D+ LQE+ S + + Sbjct: 1 MKIATWNIN------------GVKARIDTVLEWLKE----ASPDVACLQEIKSVD---EN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + ++ +A + G + + R Sbjct: 42 FPRQPFE-------DLGYAVETHGQKGFNGVA----LLSKTPLDDIQRGLPGNDADEQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI---TQKKE 200 +E + + + C L N S + +W+ I ++ E Sbjct: 91 Y-IEARLATEKGPVRI-------GCL--YLPNGNPLGTEKFSYKLEWMDRLITHAQKRLE 140 Query: 201 SLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------FPKEKDSRCNANK 249 PF++ GD+N ++ + + +S R + S A + Sbjct: 141 EETPFLLLGDYNVIPDPVDAKNPQNWLEDALFQPESRQRFRALTHLGLTEAVRSCTEAPE 200 Query: 250 NLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ +M A D ++ SDH P Sbjct: 201 TFTFWDYQAGAWQKNNGIRIDHILMSPQATDRFSGCGI-------DKHVRGWEKPSDHVP 253 Query: 298 ISIDY 302 + + Sbjct: 254 VWVKL 258 >gi|254509674|ref|ZP_05121741.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533385|gb|EEE36373.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 333 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 102/335 (30%), Gaps = 56/335 (16%) Query: 24 VRLVSWNINTLS----EQEGVSLWKNSVKRTT----SDYTLLRQYAKNLDADIVFLQEM- 74 +RL ++NI + + + + R + + LDAD + + E Sbjct: 1 MRLATYNIEWFANLFDTDDNLLADDSWSGRHDVTRAQQIEAIAKVLTALDADALLIVEAP 60 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAIAVRKKNVRVLQQ 126 + A+ + ++ N++ ++ D T A + Sbjct: 61 NTGKRQNTVRALQRFAEAFDLRTTHAVMGFANNTHQELALLFDPGTLKARHEPVGHPDDD 120 Query: 127 SYPLLGA-----KDSFSRAG----NRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 P D + ++ +EL VE G ++ HLKS + Sbjct: 121 DAPRFDGVFRIDLDVDATEDRVQFSKPPMELTVETAKGTAFRLIGAHLKSKAPHGAKSRD 180 Query: 177 YSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRK----------------- 214 S+ ++ QA WL + E+ P ++ GD N Sbjct: 181 ELIRLSIANRRKQLAQAIWLSRRVEALVEAKEPVILLGDLNDGPGLDEFEHLFGRSSVEI 240 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD----QNAYKFL 270 + G D + +R ++ + +DY ++ + Sbjct: 241 LLQAGLYDPHAAQAHGPRPGSVPATARFAR--PDEGRYLEALLDYIMISTDLRDRHPNWR 298 Query: 271 IQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYDF 304 I F + + +++ SDH P+++D D Sbjct: 299 IWHPFRDTDCWGNPELREALLTASDHFPVTLDIDL 333 >gi|110598414|ref|ZP_01386686.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM 13031] gi|110339948|gb|EAT58451.1| Endonuclease/exonuclease/phosphatase [Chlorobium ferrooxidans DSM 13031] Length = 339 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 103/344 (29%), Gaps = 68/344 (19%) Query: 5 YVLALVFFLVPCTASVA----QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTL-- 56 +++++ PC A+ A +++ L+ WNI L + + V+ + + ++T Sbjct: 9 FLVSMALSWSPCHAAGAPSGRKEIVLLWWNIENLFDTHDDPVTDDDEFTPQGSRNWTAKK 68 Query: 57 -------LRQYAKNLDA--------DIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERL 98 +R ++A DIV E+ + + P T+ Y Sbjct: 69 LLLKEMRIRHTLMAVEAHPDYGKFPDIVAFAEVENRQVFQQTLSGLPGITYKTVYYDSPD 128 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I +A K V + + R+ + +G Sbjct: 129 P--------RGIDIGLAYNPKGVTLK----ASRAYSVTLDEKPTRKIIIAEFSDSGDSFH 176 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINY 217 ++ H S F + + +++ L + + + +I GDFN + Sbjct: 177 LILNHWPSRAFDTGWSEPKRLAAAKVTR--HILD---SLRSSNPTADIITMGDFNDEPAN 231 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKF- 269 ++ + D + R K C + R ID ++ Sbjct: 232 RSLSEGLGSSFDA-AQVRRNSKTLLYNCWSGYQGIGSYYYHRKWERIDQILLSAGMLDKE 290 Query: 270 ---LIQESFSEILYN------------EDDIKSRGKRLSDHCPI 298 + + F ++ + + SDH P+ Sbjct: 291 GFSVSGDPFRCFTFSRMLLYPDNKPWPTYEKREYRGGYSDHLPL 334 >gi|325293378|ref|YP_004279242.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] gi|325061231|gb|ADY64922.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] Length = 369 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/374 (13%), Positives = 100/374 (26%), Gaps = 99/374 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRT----------TSDYTLLRQYAKNLDAD----- 67 +RL ++NI L + + ++N +R + Y L D Sbjct: 2 SLRLATFNIENLLTRFDFTGFRNQTRRDRAIQLFDIRDEATYQALESARAVSSTDDTRQL 61 Query: 68 -----------IVFLQEMGSYNAVA--------KVFPKNTWC---------------IFY 93 I+ LQE+ + A+ ++ + Sbjct: 62 SALAIADADADILCLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVM 121 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLVEI 152 + + H A+ R ++ P L A + + R +E+ + + Sbjct: 122 REQTRDGDKIEVIDIKSHAALTYRNLDLF-----NPALAATNQIDDKIFKRDCLEIDLRV 176 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIA 208 GK + + H KS + + + +A ++ I + F I Sbjct: 177 GGKPLTLYVTHFKSMTNARDAIDARLATMPIREAEAMAVRRIIENRWGANNTRNKNFAIC 236 Query: 209 GDFN-----------RKINYL--------------GNNDDFWKTIDPNDSLIRFPK---- 239 GD N R+ Y +D + D + R+ Sbjct: 237 GDMNDYQERISISGDRRSGYSFTPVEEERSALDIFTADDFVTNPMSRRDVMDRWTLYHSR 296 Query: 240 --EKDSRCN-------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ C + N + + Y+ + Y Sbjct: 297 GPQEQHLCQLDYIWLSPHLAHINATRVPEIIRAGQPYRTVFPPGQEVDRYPRTGWDRPKA 356 Query: 291 RLSDHCPISIDYDF 304 SDHCP+ + D Sbjct: 357 --SDHCPVVMTLDL 368 >gi|238063778|ref|ZP_04608487.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] gi|237885589|gb|EEP74417.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] Length = 271 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 85/305 (27%), Gaps = 65/305 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ +RL +WN+N K + R L + D+V LQE + Sbjct: 4 ARGMRLATWNVN---------SVKARLPR-------LLDWLATTGPDVVCLQETKCPDGA 47 Query: 81 AKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDS 136 V + + + ++ N +A+ R V G + Sbjct: 48 FPVAEVGELGYTVASHSDGRWN------------GVAILSRAGLADVTVGFPGEPGFPEP 95 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +RA + + V +++ + Y + L+D + Sbjct: 96 EARA---------ISATCAGLRVWSVYVPNGRAPGDPHYAYKLA------WFAALRDALE 140 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIR--------------FPKEK 241 Q+ +P + GDFN D + T R P Sbjct: 141 QELTGGLPLAVCGDFNVAPTDADVWDPALFATSTHVTPAERDALAALRDLELSDVVPTPM 200 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPIS 299 + + + + F+ + D +GK SDH P+ Sbjct: 201 KGP-HPYTYWDYRAGMFHQNKGMRIDLVYASAPFARAVRAAYVDREARKGKAPSDHAPVV 259 Query: 300 IDYDF 304 +D D Sbjct: 260 VDADL 264 >gi|325510164|gb|ADZ21800.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018] Length = 374 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 33/199 (16%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K+ + S L +S+ V + + +H + D Sbjct: 50 NKRYGTITDGSDQLTPKGFMYSQYEFEPGVYV---------DIYTLHADAG--DDEGSYE 98 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-----------DDFW 225 + L +I + ++ GD N + +N D W Sbjct: 99 ARRD------NIEQLAAYINE-NSKGNAVIVMGDTNTRYTRQQDNIKQALVDACNLKDAW 151 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +D N + + N+N N +D + + L S+ L + + Sbjct: 152 VKLDRNG--VYPSTGEPLMDETNRNSANFEVVDKILFRGSKSLTLDALSYR--LEDTKFV 207 Query: 286 KSRGKRLSDHCPISIDYDF 304 GK+LSDH PI +++ Sbjct: 208 DKSGKQLSDHYPIIAQFNY 226 >gi|261329150|emb|CBH12129.1| RNA-editing complex protein MP100 [Trypanosoma brucei gambiense DAL972] Length = 894 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 96/300 (32%), Gaps = 35/300 (11%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 V ++L++WN+ + S + + Y ++ + + DAD+V +QE+ Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVEP 672 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 VF + F S LI S + AIA + + ++ P+ Sbjct: 673 ------VFWE-----FLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721 Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A + +++ + + HL + + S EN + Q L+ Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAP-YTKSHENARTS-------QDTALRH 773 Query: 194 WITQKKESLVPFVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + K V GDFN + + D W + PND + ++ C Sbjct: 774 HM-TKTLGGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNDPGKTMDE-TNTFCKL 831 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 D + + + ++ + SDH +SI + Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFSL 891 >gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] Length = 255 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 83/255 (32%), Gaps = 58/255 (22%) Query: 57 LRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L + A+ L D+V LQE+ + + + + + +T+ H R N ++ A Sbjct: 41 LARIAQLLRQFDVVGLQEVDAGSLRSSYVDQTQY---LATQGAFPHWYRQINRNLAP-FA 96 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLE 174 + + P + R V ++ ++ + +HL L Sbjct: 97 QHSNGLLARPR--PACITEHRLPGLPGRGVVVAEFALDDGEVLAIGIVHLALGWNARRL- 153 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDS 233 Q +L + P+++ GDFN N G + Sbjct: 154 ------------QLDYLS-----RLAQTYPYLVLMGDFNCGCNSKGLRN----------- 185 Query: 234 LIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--G 289 ++R + C + R + +D+ ++ + + + +R Sbjct: 186 MVRRSGMRGLDCELKTFPSWRPRHNLDHILVSRPI----------------EVVAARVLD 229 Query: 290 KRLSDHCPISIDYDF 304 LSDH PIS+ + Sbjct: 230 YALSDHLPISMRIEL 244 >gi|320163021|gb|EFW39920.1| apurinic/apyrimidinic endonuclease 2 [Capsaspora owczarzaki ATCC 30864] Length = 734 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 70/317 (22%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-----VAKVFPKNT 88 L + +R++ + LL L ADIV QE A +A V + Sbjct: 188 LDGAQASGFGPVRSQRSSLLFQLL----DALQADIVCFQETKLTAAQVTEEMALV---DG 240 Query: 89 WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + F+S +D + I T IA + P + S + + Sbjct: 241 YDAFFSF-----SIAKDGYSGIATPIAAQDGLTGRRVVKPPEPSSASVTS-VPLQTGDVI 294 Query: 149 ----LVEI--NGKKIWVLDIHLKSFCFLDSLENT--YSPSCS----------LLSQQA-Q 189 L+ + + + + C + + ++ C Q+ + Sbjct: 295 KPDGLLPDYSDMDPTVLDALDSEGRCVVTDHDRFVLFNLYCPRADSAEGERMTFKQEFYR 354 Query: 190 WLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPND------SLIRFPKE 240 L+ + + + ++AGDFN R+I++ + T D R+ + Sbjct: 355 VLQLRVNALRTAGRCVIVAGDFNLTHRRIDHCDPENY---TTDDGSVDFEAHPSRRWMES 411 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRL------ 292 + + + ++ + + E Y D I + L Sbjct: 412 FLAEGRVDCFRHF-----HPLLSSRYTCWRVDTRARETNYGTRIDYIVTDQALLPDISGC 466 Query: 293 --------SDHCPISID 301 SDHCP+ I Sbjct: 467 YHLTRFPGSDHCPVVIT 483 >gi|254450713|ref|ZP_05064150.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] gi|198265119|gb|EDY89389.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] Length = 348 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 88/331 (26%), Gaps = 66/331 (19%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--- 76 ++ L WNI R+ + LL D++ +QE+ Sbjct: 35 AQDRLLLACWNIANF----------GVQNRSDNALDLLAHICGRF--DLIAVQEVNENWH 82 Query: 77 -YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + K TW S + + V + + +P Sbjct: 83 PLADMVKHMGP-TWDFIMSDTAGNSERLAFVFDRDRVTPKQLFGEVALRARDFPKRDVTV 141 Query: 136 SF---SRAGNRRAVELLVEI------------NGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ ++R +L E + + + HL + + Sbjct: 142 HYTYYNKPKSKRFDDLAFEPFDRNPYIGSFACGSVDLTLANCHLYYGKGGNPTTQAKRQA 201 Query: 181 CSLLSQQAQWLKDWITQKKESLVPF----VIAGDFN------RKINYLGNNDDFWKTIDP 230 + + L W ++ + + ++ GD N ++ +Y + + Sbjct: 202 YARRVMEVHALARWADKRSQKDTTYDQDIILLGDMNVPDMTLKQASYRALIEYGMQ---- 257 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFVMDQNAYKF-----LIQESFS 276 L + S + IDY V D + F + + Sbjct: 258 --PLKYASRVGGSNLSGKNTYDQMAFAPGRLQTRIIDYDVFDFDNAVFAGLWDKLDTTAD 315 Query: 277 EILYNEDDIKSR----GKRLSDHCPISIDYD 303 + + LSDH P+ + D Sbjct: 316 PDPNPDKRVSEFRSHVNYHLSDHRPLWVQLD 346 >gi|307592282|ref|YP_003899873.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] gi|306985927|gb|ADN17807.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7822] Length = 798 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 108/343 (31%), Gaps = 77/343 (22%) Query: 16 CTASVAQKVRLVSWNIN----TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 A V +++ +N+ TL + + ++ ++ L L+AD++ L Sbjct: 449 TPAEVGGDIKIGDFNLENYFTTLGSRGAQTEFEFQRQQD-----KLVSAILGLNADVLGL 503 Query: 72 QEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +E+ + +A+ V T+ N D A+ + K Sbjct: 504 EEVQNNGYGPNSAIASLVDALNTVAGAGTYAYI-------NPGVAQLGTDQ-IAVGLLYK 555 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKS---------FC 168 RV + F+ NR A+ + ++ ++ + H KS C Sbjct: 556 PSRVNPVGNAAILDTGIFNPTINRPALAQTFKGLLDSEQFTIAVSHFKSKGGTASAAGSC 615 Query: 169 FL----DSLENTYSPSC-SLLSQQAQWLKDWITQKKES-LVPF-VIAGDFNRKINYLGNN 221 D + + +C L QA L W+ + + +I GD +N Sbjct: 616 TAAQNADQGDGQGAFNCTRTL--QAIQLSQWLATNPTNSKTNYQIILGD----LNSYAKE 669 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSEI 278 D I +S +K N + + + +DY + F+ + I Sbjct: 670 DP----ITTIESAGYINLDKQFGGNNTYSYQFQGQFGTLDYGFSSASLLPFVTGATPWHI 725 Query: 279 LYNEDDIKSRGKRL-----------------SDHCPISIDYDF 304 +E D+ SDH P+ I +F Sbjct: 726 NSDEPDVLGYSTAFKSPSQIDSIYSPDAFASSDHDPLLIGLNF 768 >gi|32472775|ref|NP_865769.1| signal peptide [Rhodopirellula baltica SH 1] gi|32444012|emb|CAD73454.1| hypothetical protein-signal peptide prediction [Rhodopirellula baltica SH 1] Length = 284 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 90/277 (32%), Gaps = 32/277 (11%) Query: 23 KVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R+V++NI L L + +V R L D DI+ E S Sbjct: 32 PLRVVAYNIYNLKGWPSQSPLAQQAVARGQMA-KRLAMELALYDPDIINFSESPSEKLTK 90 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + +NH + S + + + K K+ F+R Sbjct: 91 EV----------AELLGMNHVRFPSGGNWPGTLLSKSKISDSQNAPMNGERPKELFTRHW 140 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VEL N + + V HL +P ++ ++ + + + +S Sbjct: 141 GRALVEL---PNDEPLIVHSAHL-----------YPTPEPTIRLREIRAMIKSMKSDLDS 186 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GD N + + WK D+ + + K + IDY Sbjct: 187 GRSMLLIGDLNH--SPDTDEYKLWKDAGWIDTFAKVGEGNGFT---IKADNPEWRIDYVF 241 Query: 262 MDQNAYKFLIQE-SFSEILYNEDDIKSRGKRLSDHCP 297 K + + E + ++ + LSDH P Sbjct: 242 ATGPIAKRVGESRPLFEGAFRVNNEDEKSYALSDHLP 278 >gi|325915043|ref|ZP_08177372.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325538741|gb|EGD10408.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 288 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 45/307 (14%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V L L A+ + +R++S+N+ V + + KR + + Sbjct: 17 VAVLCIVLPALAATPSAPLRVMSFNVR-------VPVDTDGDKRWQVRRDAMVALIRQTH 69 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSNNDIHTAIAVRKKNVR 122 D+ QE+ A T+ F H ++ + T V + Sbjct: 70 PDVFGTQELVQEQAQYLATHLPTYRWFGKGRNADGGGEHMGVFYDSRVLT--VVESGDFW 127 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + P S+ R L E + ++ ++ + HL + P+ Sbjct: 128 LSET--PGTPGSSSWGTDLPRLVTWALFERRGDKRRFYLFNTHL-------PHRDQDEPA 178 Query: 181 CSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 +QA L I + +P V+ GDFN + D K+ P + Sbjct: 179 ----REQAARL---ILSRIAKLPADIPVVLTGDFN------SDPD---KSTYPTLTAALG 222 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + +++ + + D + G SDH P Sbjct: 223 DARTHAPKRNGPENTFQDFSTH---PTRRIDWILFRGLTPTRFTTLDERPGGILPSDHYP 279 Query: 298 ISIDYDF 304 + ++D+ Sbjct: 280 VLAEFDW 286 >gi|301612064|ref|XP_002935555.1| PREDICTED: deoxyribonuclease-1-like isoform 2 [Xenopus (Silurana) tropicalis] Length = 350 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 95/318 (29%), Gaps = 63/318 (19%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 LLVLVAVTACFLQAGFSFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ ++E+ + ++ V K + + S + L S R+ I+ V K Sbjct: 53 -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLIS-DHLGRSSYREKYAYIYREDIV-K 109 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 DSF R R V + ++ IH S + Sbjct: 110 PVEWYHYDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH-------TSPDYA 159 Query: 177 YSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L W+ K+ +I GD+N +Y+ + + L Sbjct: 160 VM--------EVDALYDAWVDAKQRLKMENILILGDYNAACSYVAARHWPIIRLRHAEEL 211 Query: 235 IRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIK 286 ++ C D V + +I + Y+ Sbjct: 212 AWLIGDKEDTTVSTNTNCA----------YDRMVAGGQQLQSGIIPGTAKAFNYHVAYDL 261 Query: 287 SR--GKRLSDHCPISIDY 302 + K +SDH PI ++ Sbjct: 262 TYEMAKAVSDHYPIEVEL 279 >gi|301612062|ref|XP_002935554.1| PREDICTED: deoxyribonuclease-1-like isoform 1 [Xenopus (Silurana) tropicalis] Length = 353 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 95/318 (29%), Gaps = 63/318 (19%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L ++ + C ++ S+NI + ++ + V LL + + Sbjct: 3 LLVLVAVTACFLQAGFSFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE- 52 Query: 67 DIVFLQEM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ ++E+ + ++ V K + + S + L S R+ I+ V K Sbjct: 53 -VIAIEEVMNADNTAIISLVKELSLATKLNYNVLIS-DHLGRSSYREKYAYIYREDIV-K 109 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 DSF R R V + ++ IH S + Sbjct: 110 PVEWYHYDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH-------TSPDYA 159 Query: 177 YSPSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L W+ K+ +I GD+N +Y+ + + L Sbjct: 160 VM--------EVDALYDAWVDAKQRLKMENILILGDYNAACSYVAARHWPIIRLRHAEEL 211 Query: 235 IRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIK 286 ++ C D V + +I + Y+ Sbjct: 212 AWLIGDKEDTTVSTNTNCA----------YDRMVAGGQQLQSGIIPGTAKAFNYHVAYDL 261 Query: 287 SR--GKRLSDHCPISIDY 302 + K +SDH PI ++ Sbjct: 262 TYEMAKAVSDHYPIEVEL 279 >gi|297539130|ref|YP_003674899.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] gi|297258477|gb|ADI30322.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] Length = 250 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 41/211 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 +R+ ++NI+ + ++R + L AD++FLQE+ + Sbjct: 4 TLRIATFNIHKGFTHFNARFSLH-LQRDM---------LRKLQADVIFLQEVQDVHTKHT 53 Query: 82 ---KVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + F + E ++S K H AV K +++ + + A + Sbjct: 54 ERFASMSTSGQMEFLADEVWSDYSYGKNSVYPAGHHGNAVLSKFP-IIKTNNQDISAHAT 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E+ + + + + +HL F QQ + ++I Sbjct: 113 EQRGMLH--CEINIPTWDEPLHAVCVHL--GLFAQWRR-----------QQLVSVSEYIE 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 Q + P +IAGDFN D +T Sbjct: 158 QHIPANAPLIIAGDFN---------DWGMRT 179 >gi|254481760|ref|ZP_05095003.1| endonuclease/exonuclease/phosphatase family protein [marine gamma proteobacterium HTCC2148] gi|214037889|gb|EEB78553.1| endonuclease/exonuclease/phosphatase family protein [marine gamma proteobacterium HTCC2148] Length = 255 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNN 108 +R+ ADIVFLQE+ S K + Y ++ H N Sbjct: 28 LESMRERITETGADIVFLQEIHGTAIKSEAKKRKFSYPDQPHFEYLADQAWPHFAYGQNA 87 Query: 109 DIHTA---IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 A+ + + ++ + SR+ + + ++ L +HL Sbjct: 88 IYRKGDHGNAILSMHPFISWENI-DVSIFPRSSRSILHG--VIELPHKKTRLHTLCVHL- 143 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDD 223 +Q Q L + I Q P +IAGDFN R+ +DD Sbjct: 144 -GLLEQERR-----------EQLQTLTERIDQHVPRDEPMIIAGDFNDWRRRAENHLHDD 191 Query: 224 F 224 Sbjct: 192 L 192 >gi|254409485|ref|ZP_05023266.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196183482|gb|EDX78465.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 287 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 98/283 (34%), Gaps = 54/283 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ LV++NI S+ + +R + L++ DAD + LQE+ + ++ K Sbjct: 39 ELTLVTYNI-WFSDY-------HRQQRHEAILKLIQD----CDADAIALQEV-TPTSL-K 84 Query: 83 VFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRK-KNVRVLQQSYPLLGAKDSFSR 139 + + W +YS++ T + V + + + L D S+ Sbjct: 85 LILEQDWVRKNYYSSDT--------------TGVTVNPYGVLLLSKLPIDRLFFCDLISQ 130 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + + +++NG+ + +HL+S + + L+ L+ Sbjct: 131 MSRKF-LCAELQLNGQNFNIATVHLES-----KKKFASIRTIQ-LADIFPLLE------- 176 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLR 252 V+ GDFN ++ N + W + ++ + + K Sbjct: 177 -HADHAVLMGDFNFCSSWKSENRNLDPRYQDMWAVLRGDEPGYTEDTDINLMRLQQKQKH 235 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K+ D ++ + + ES + S SDH Sbjct: 236 KKVRFDRILLRSASQSWQ-PESIERLGLKPISRNSPNVFPSDH 277 >gi|149922030|ref|ZP_01910471.1| hypothetical protein PPSIR1_24184 [Plesiocystis pacifica SIR-1] gi|149817082|gb|EDM76563.1| hypothetical protein PPSIR1_24184 [Plesiocystis pacifica SIR-1] Length = 202 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 61/225 (27%), Gaps = 61/225 (27%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ T KR T LL L D++ L E S A++ Sbjct: 5 SWNLGT------------KGKRETRALELLPGLVSGLQPDLLVLAE--SPEDGARLEGFE 50 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 S L H + TA++VR + + A E Sbjct: 51 RADPMPSARGLETHYRE-------TALSVRA------------------LGQGSHYSAYE 85 Query: 148 LLVEINGKKIWVLDIHLKSFCF---LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 L + ++ +HL+S + + C + + Sbjct: 86 LAAPRTRSSLNLVTVHLQSPLRDRGEQARARKRAQRCREFIEDL--------EHAAGNTR 137 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS---RCN 246 +I GDFN D F + D L + C Sbjct: 138 TIILGDFN--------MDPFAVAMLDIDGLNAVSTTTRTLYNPCW 174 >gi|56756625|gb|AAW26485.1| SJCHGC05406 protein [Schistosoma japonicum] Length = 198 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 14/157 (8%) Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---- 212 + ++ +HLK+ +S L +L + + S +IAGDFN Sbjct: 44 LVIISVHLKASGLRNSQIGKTIAEIESLG----YLVQAFYETQPSGTHLIIAGDFNLFPT 99 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + W + E S + + D + + ++ Sbjct: 100 HEAYRVLREHGLWPVLKGEHQTTLNHSEGRSN-HLRAYDNAWLSADLSISSGSTARWTGD 158 Query: 273 E-----SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L E+ +SDH PI D + Sbjct: 159 SGVILKGLRHPLIPEETGSGANGLVSDHAPIWFDINL 195 >gi|323530343|ref|YP_004232495.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323387345|gb|ADX59435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 258 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 45/200 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--- 74 + + +R+V++NI V + R ++ + + L+AD+V LQE+ Sbjct: 28 SHTGEPLRIVTYNI-----HGAV----GTDGRRSA--ARIAEVITALNADVVALQEVPLG 76 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + + ++ + ++ R N + T + VR VR L S+ Sbjct: 77 GAASIDVLRELQDLTG--MHAVPGPTLDGPDRRFGNAVLTNLPVRA--VRTLDLSFGSRE 132 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A R A+++ ++ + ++ HL L + Q + L Sbjct: 133 A---------RGALDVDIDTGNGLMRIVATHL-------GLSARERRA------QVRLLL 170 Query: 193 DWITQKKESLVPFVIAGDFN 212 + +P ++ GD N Sbjct: 171 EAFDT---PDLPVILLGDLN 187 >gi|326335669|ref|ZP_08201855.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692098|gb|EGD34051.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 253 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 47/280 (16%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+ K T ++ + K ++ADI+ L E ++A+++ Sbjct: 3 KIATWNVE------------RPKKGTEKTALVMEEI-KEVNADILVLTESAVSISLAELY 49 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P F + + I + + K+ + F + Sbjct: 50 P------FSIHSLAYERTPEEHWVSIFSKWKITKQIETFDNFRTTCAVVETPFGKVIV-F 102 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + G ++ C + L QQA+ +W ++ +P Sbjct: 103 GTIIPYHQAGVS------GVRYGCLGYKQWEYHEKD---LHQQAK---EWGRILEQEGLP 150 Query: 205 FVIAGDFN--RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK-------NLRNKI 255 +I GDFN R N + + + S + C+ + + + Sbjct: 151 ILIKGDFNQSRYNNQGYGTEKVRQILSDYLSQLDLTCIT--ECDLSSFLHIDPIKHKVRN 208 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ + + + + D GK +SDH Sbjct: 209 NIDHICISNSLIRKVKGYQVG----AWDHFSEEGKYMSDH 244 >gi|302686738|ref|XP_003033049.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] gi|300106743|gb|EFI98146.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] Length = 697 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 97/345 (28%), Gaps = 87/345 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +++++WNIN + W + D LDADI+ QEM S N Sbjct: 1 MKIMTWNINGIRTIPQYHPWNGLK--SHKDI------LDKLDADIICFQEMKSSRQNLPK 52 Query: 82 KVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVLQ--QSYPLLGAKDSF 137 V + F+S T++ D +T V + S + Sbjct: 53 DVAVPPGYTSFFSFPTKKAGYSGVAIYVKDQYTPFKVEDHLCGLANATASDADRISPALS 112 Query: 138 SRAGNRRAVEL----------LVEINGKKIWV---LDIHLKSFCFLDSLENTYSPSCSLL 184 S +R A ++ G+ + L + + +C D E + Sbjct: 113 SYPMHRFADLDDDEDDPIDFKSLDAEGRTLVADFGLFVLINVYCPNDGSEAQERMKYKMD 172 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN---------------RKI-------------- 215 + L + + ++ GD N RKI Sbjct: 173 FH--RMLSVRVRGLIDEGREVIVVGDLNAVSDVGDHCEGALTVRKIIDEARKEGQEVGEK 230 Query: 216 -------NYLGNNDDFWKTI-DPNDSLI------RFPKEKDSRCNANKN----LRNKIPI 257 + + ++ + L+ ++ C K I Sbjct: 231 EAEEMFYDTMPARRWLRDSLVEHGGPLVDVCKRFWPERKGMYTCWNTKISARASNYGARI 290 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 D+ ++ + D+K SDHCP+ +++ Sbjct: 291 DFILVTPYLLPLIKHADIQ------PDVKG-----SDHCPVIVEF 324 >gi|148240155|ref|YP_001225542.1| exodeoxyribonuclease III [Synechococcus sp. WH 7803] gi|147848694|emb|CAK24245.1| Exodeoxyribonuclease III [Synechococcus sp. WH 7803] Length = 276 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 91/316 (28%), Gaps = 91/316 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQE--MGSYN 78 +R+ SWN+N RT L LD D++ LQE + Sbjct: 1 MRIASWNVN--------------SVRT-----RLEHVLGWLDRNTIDVLALQETKVDDPL 41 Query: 79 AVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K F + + + ++ N R D+ LG + Sbjct: 42 FPLKPFQERGYHLSIHGQKSYNGVALISRQPLEDVRLGF----TGELPGDADAEALGTQK 97 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLLSQQAQWLK 192 + ++G I V+++++ + LDS + +Y + C L+ Sbjct: 98 RV----------ISALVDG--IRVVNLYVPNGSSLDSEKYSYKLNWMGC---------LE 136 Query: 193 DWITQKKESLVPFVIAGDFN--------RK--------INYLGNNDDFWKTIDPN----- 231 ++ + P + GDFN + + + N Sbjct: 137 RYLRAAETRDEPLCVVGDFNIGPEARDLHDPERLTGGIMASEAERKALVQVLGSNLGDAF 196 Query: 232 -----DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 S + S + ID+ + + + S D + Sbjct: 197 RLFEPGSGHWSWWDYRSGAWNRDS---GWRIDHIYISSDLQELARSCSI-------DKEE 246 Query: 287 SRGKRLSDHCPISIDY 302 ++ SDH P+ +D Sbjct: 247 RGREQPSDHAPVVVDL 262 >gi|90577495|ref|ZP_01233306.1| endonuclease/exonuclease/phosphatase family protein [Vibrio angustum S14] gi|90440581|gb|EAS65761.1| endonuclease/exonuclease/phosphatase family protein [Vibrio angustum S14] Length = 352 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 31/227 (13%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVF 70 P ++++ S+N+ N L+ ++N L + DI+ Sbjct: 9 FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILEAQQPDIIG 68 Query: 71 LQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 QE+ ++ + + + + R I + + + Sbjct: 69 FQEVFSADDLQSLLRDIGYPYFAVVDEPIVEGDFIYRSPVVAIASKFPITEVIAVEADIE 128 Query: 128 YPLLG--AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSL 183 L A+ SFSR R V++ + HLKS F D L T + S S Sbjct: 129 AAQLMGWAEFSFSRKPLRATVDI---PHIGATDCYVTHLKSKRSLFDDPLPETITKSGSA 185 Query: 184 L-SQQAQWLKDW-----------------ITQKKESLVPFVIAGDFN 212 L S Q L +W + +++++ P V+ GD+N Sbjct: 186 LASFLGQRLGNWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYN 232 >gi|119898073|ref|YP_933286.1| hypothetical protein azo1782 [Azoarcus sp. BH72] gi|119670486|emb|CAL94399.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 280 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 38/211 (18%) Query: 26 LVSW-NINTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQEMG---- 75 L SW N++ ++ + + +V R D + + L DIV LQE+ Sbjct: 8 LASWRNLDHALGEDCLRISSYNVHRCVGRDGRMDVARVARVIDELGCDIVGLQEVDNLAN 67 Query: 76 -SYNAVAKVF-PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 S+ ++ F T + ++NH N A+ R+ + V + Sbjct: 68 GSHESMQLDFLASATGMEAIAGHTIVNHEGSFGN-----ALLTRRPVLAVRRHDL----- 117 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S+ R R A+++ +E+ + + V+ HL + Q + L D Sbjct: 118 --SYHRREPRGAIDVDLEVKDEVVRVIVTHL--GLRPAERRF-------QVRQMLKLLHD 166 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++ V+ GD N + Sbjct: 167 IPPERN-----VVVLGDINEWLPLGRPLRWL 192 >gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC 10987] Length = 788 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|332978781|gb|EGK15471.1| exodeoxyribonuclease III [Psychrobacter sp. 1501(2011)] Length = 271 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 78/285 (27%), Gaps = 67/285 (23%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L +D D++ +QE KV + + + H +A Sbjct: 18 QLEAVRDIIDPDVMGIQE-------TKVHDE---QFPLQDVESLGYHVEYFGQKAHYGVA 67 Query: 116 -VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V K +Q+ +P + R +GK+I VL+ F Sbjct: 68 LVSKVKPIFVQKGFPGESEEAQKRFIHARYIF------DGKEIDVLN-----GYFPQGES 116 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----------DF 224 + + + L +++ Q K+ +I GD N +ND Sbjct: 117 RDHETKFPMKREYYASLNEYVDQLKDEGRTLIIMGDMN---IAPEDNDIGIGEKNAQRWL 173 Query: 225 -------------WKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKI-----------PIDY 259 W + + L + + CN + ID+ Sbjct: 174 KNGKTSFLPEEREWYSALMSRDLFDTYRIHNPDCNEKFSWFDYRSRGFNDDPKRGLRIDH 233 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + I S ++ SDH PI + F Sbjct: 234 ILCTDDIKDQCIDAGIS-------YELRAMEKPSDHAPIWASFKF 271 >gi|262202978|ref|YP_003274186.1| endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM 43247] gi|262086325|gb|ACY22293.1| Endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM 43247] Length = 318 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 82/292 (28%), Gaps = 67/292 (22%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V +A Q + +VS N+ +D L + DAD+V LQE Sbjct: 85 VAHSAPSGQPITVVSANLLF----------------GEADVDALSKLIAESDADLVSLQE 128 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + A+A++ I +L + TA+ + + Sbjct: 129 V-TPEALARIRGS---QIV---RQLPHEYAIPYPLAAGTAL--------LSRTPLTEPFN 173 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D + +L VL +H LD + + +L+ + L Sbjct: 174 IDGTVLHNLAASTDL---PGAPGTRVLAVH--PGAPLDGKADVWVRDMDILTAHLRSLPA 228 Query: 194 WITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 P ++AGDFN Y D + P R Sbjct: 229 ---------GPVIVAGDFNVTWDNARYRALLDLGFADAAEQAGAGFLPTYPTDRFGGQPV 279 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ + + +++ SDH + + Sbjct: 280 ----VAIDHVITRG---------------FVATSMRTAALPGSDHRAVVVTL 312 >gi|318042025|ref|ZP_07973981.1| exodeoxyribonuclease III [Synechococcus sp. CB0101] Length = 276 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 97/308 (31%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N RT D + + + D++ LQE ++ Sbjct: 1 MRIASWNVN--------------SVRTRLD--QVLAWLETEQPDVLCLQET---KVADQL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 FP + + + S + +A+ + Q + L D + + Sbjct: 42 FPSAAFE-------QMGYHCAISGQKAYNGVALISRLPLDDVQIGFSALLPDDPDAPELS 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLLSQQAQWLKDWITQKK 199 + + ++G + VL++++ + L S + TY + C LK ++ + Sbjct: 95 EQKRVISALVDG--VRVLNLYVPNGSSLSSDKYTYKLAWLAC---------LKRYLAVQH 143 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN----------- 248 + P + GDFN +D + ++ S A Sbjct: 144 DQGDPLCMVGDFNIGPEARDLHDP--DRLSGGIMATDAERQALSDALAGRLTDVFRVFEP 201 Query: 249 -----KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + ID+ + + + L + I D + SD Sbjct: 202 GSGHWSWWDYRSGAWDRDQGWRIDHIYLSE---ELLDCATGCVI----DKTPRGNTQPSD 254 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 255 HAPVVVNL 262 >gi|315126420|ref|YP_004068423.1| hypothetical protein PSM_A1337 [Pseudoalteromonas sp. SM9913] gi|315014934|gb|ADT68272.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 337 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 28/186 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L Y D++ QE+ S ++ ++ + F + A+A Sbjct: 30 LINYLTEYQPDVIGFQEVFSIESLKELVKDQGYTYFGVVDE-PQVIDDFIYKRPVVALAA 88 Query: 117 RKKNVRV-----LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 + V V + LG + F+ + + + G +H KS + Sbjct: 89 KYPIVEVATVELDHELADTLGLTEDFTFSRKVLRATITLPHIGN-TDCYVVHFKSKRSMI 147 Query: 172 SLENTYSPSCSLLS----QQAQWLKDW-----------------ITQKKESLVPFVIAGD 210 L+ + +A W I +++ + P V+ GD Sbjct: 148 ELDEQNKNLTPEKNIIELLKADIAGSWGSTIQRGSEATLLMIDIIARRESTQNPMVLMGD 207 Query: 211 FNRKIN 216 FN + Sbjct: 208 FNNDLA 213 >gi|284034261|ref|YP_003384192.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813554|gb|ADB35393.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 252 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 94/286 (32%), Gaps = 42/286 (14%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 ++R+ ++NI S Q+G + W V+R + LDA++V LQE+ + Sbjct: 4 QLRVATFNIRNSSAQDGDNSWP--VRREVA-----VAAIAALDAEVVGLQEVLPDQLADL 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKNVRVLQQSYPLLGAKDSFSR 139 +P W I + + S + +V R L P + Sbjct: 57 RTAYP--DWTIVGAGRDDGVAAGEHSVVMVRPGDWSVESDETRWLSAD-PATPGSVGWDA 113 Query: 140 AGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A + + ++G ++ VL+ H + E S ++ L W + Sbjct: 114 ELTRIATLVRLRHVSGVRVGVLNTH-----YDHVGELAQVES-------SRLLDRWAAAE 161 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + P+V+ GDFN + + P + + ID Sbjct: 162 PD--RPWVLLGDFN-----AEPGSPPLQVLTEAGWTDAIPAAAGGTWHDFTGATDGQRID 214 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ + + + + + SDH P++ Sbjct: 215 HILVS---------KPWQVVEAAVSYHRPANRLPSDHWPVAATLHL 251 >gi|159042976|ref|YP_001531770.1| endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] gi|157910736|gb|ABV92169.1| endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] Length = 236 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 66/209 (31%), Gaps = 48/209 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-----SYNA 79 L SWNI + RT LDADI+ LQE A Sbjct: 4 TLASWNIR----AGLGRDLRRRPLRTIE-------VITGLDADILVLQEADFRMQPRPAA 52 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFS 138 + P I R+I+ + H IAV + V+V L A + Sbjct: 53 L----PAPRGRI--GPFRVIDLTPDAVGLGWH-GIAVLKHPAVKVDGIRRYDLPALE--- 102 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R AV + + + + V+ +HL L + +++Q L Sbjct: 103 ---PRGAVVVDIRVRQCPLRVVGVHL------GLLRGNRRKQIAYIAEQLAALDQ----- 148 Query: 199 KESLVPFVIAGDFN---RKINYLGNNDDF 224 P +IAGDFN + D Sbjct: 149 ----RPTIIAGDFNEWRERKGLETLPDWL 173 >gi|114569380|ref|YP_756060.1| endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10] gi|114339842|gb|ABI65122.1| Endonuclease/exonuclease/phosphatase [Maricaulis maris MCS10] Length = 356 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 92/292 (31%), Gaps = 40/292 (13%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 +V + L +WNI + L R Y + + D+V +QE+ Sbjct: 36 TVDDTLLLATWNIREF-DSPAYGL------RGVEPYHYIAEIISRF--DLVAIQEVRRDT 86 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR----KKNVRVLQQSYPL 130 + ++ + W + + ++ ++ + VR V + Sbjct: 87 EPLEKLRRLLGR-WWKYLVTDVTGGSEGNKERMAFLYDSRKVRFGGLAGEVVIPPIETRD 145 Query: 131 LGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 K ++ + R + E K + +H+ + +S + + Sbjct: 146 ENRKLVYTPSKQLARTPYLVGFETGWFKFMLSTVHI---VYGESKADDPKR-----EAEI 197 Query: 189 QWLKDWITQKKESLVPF----VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + ++ + + + ++ GDFN D +K + P+ Sbjct: 198 RAIARFMAARAKEDHAWAENLILLGDFN----IFDPGDVTFKALTEAG--FVIPEGLQQV 251 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFS--EILYNEDDIKSRGKRLSD 294 N K R + + + + L +F+ + +Y +D + + D Sbjct: 252 TNVGKEERFFDQMAFMTPNLRKDQILASGAFNFYDHVYRPEDEATYISDMGD 303 >gi|114047106|ref|YP_737656.1| PKD domain-containing protein [Shewanella sp. MR-7] gi|113888548|gb|ABI42599.1| PKD domain containing protein [Shewanella sp. MR-7] Length = 948 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 109/337 (32%), Gaps = 54/337 (16%) Query: 15 PCTASVAQK--VRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDA 66 P + +A+ +++ S+N +N + G T S++ + + + A Sbjct: 449 PQSPVLAEGGNLKVASFNVLNYFNGDGQGGGFPTARGANTLSEFERQKAKIVSAMVGISA 508 Query: 67 DIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 D+ L E+ + + +N + N S ++ I + Sbjct: 509 DVFGLMEIENDGFGANSAIADLVAGLNAAVGENRYDYVIPKVNGSNLSAIGTD-AITVGL 567 Query: 115 AVR------KKNVRVLQQSYPLLGAKDS--FSRAGNRRAVELLVEING--KKIWVLDIHL 164 R + + R+L + L F + NR + +NG + + V HL Sbjct: 568 IYRSDKVSPQGDARILSSANSPLDDAGQPLFDDSKNRPMLTQAFALNGSEESVVVAVNHL 627 Query: 165 KSF---CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KI 215 KS C D N +C+ ++ A WI + ++ GD N + Sbjct: 628 KSKGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDPL 686 Query: 216 NYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--------YFVMDQN 265 + L N + + ++ + + + L N +D + D+ Sbjct: 687 SALANAGFSELFAKLEKANPYSYVFSGESG--QLDHALANAALVDKVLDVTEWHINTDEP 744 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E F +D S R SDH P+ I Sbjct: 745 -RVLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|260557567|ref|ZP_05829782.1| nuclease [Acinetobacter baumannii ATCC 19606] gi|260409193|gb|EEX02496.1| nuclease [Acinetobacter baumannii ATCC 19606] Length = 812 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 104/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKPLNKAV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 574 ---VLDLGDKNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D + Y ++ + + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGAGN---LDHAIADADLYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|187932631|ref|YP_001886154.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] gi|187720784|gb|ACD22005.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] Length = 258 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 66/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++N+ + + R L+ D DI+ QE A K+ Sbjct: 1 MKVMTFNLR-------CDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQE-----ATEKM 48 Query: 84 FPK-----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F + + I + S+R+ I + KK+ +++ L D Sbjct: 49 FNDISNNIDAFNIIGNPRSKKLFSERND-------ILISKKHKVNDYRTFWLRDNYDKIG 101 Query: 139 RAGNRR------AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R+ ++ N K+I + + HL FL Y + + L Sbjct: 102 RSKWYSMFPRICTTAIIELENSKRIRICNSHLD---FLLPQARAY---------ELKKLS 149 Query: 193 DWIT-QKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDPNDSLIRFPKEKD 242 ++I ++++ +P +I GDFN N N D N L Sbjct: 150 EFIKKEQEKEDLPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELY-----TK 204 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + KN IDY + + + YN + GK SDH P+ + Sbjct: 205 ATMGHFKNKEKGSHIDYIFVSEEFEII----DVEIVKYNVN-----GKYPSDHYPLMAEI 255 Query: 303 D 303 + Sbjct: 256 N 256 >gi|302552172|ref|ZP_07304514.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302469790|gb|EFL32883.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 32/198 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++R+V+WN+ + R + T LR+ L D+V LQE+ N Sbjct: 2 RMRIVTWNLWW--------RFGPWQTRQKAILTALRE----LRPDVVGLQEVWAADGENL 49 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ +R + + AV + V + PL ++ Sbjct: 50 AEWLAGELGLHCAWAPSPAPERWRRRIGDATVDIGNAVLSRWPVVDRDVLPLPAPAETDD 109 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A+ + G + H S + + + C QA L ++ + Sbjct: 110 ---GRLALYARLAAPGHDVPFFTAHFTS------VPHGSAVRCG----QAAALAGFV-AR 155 Query: 199 KESLVPF--VIAGDFNRK 214 PF V+ GD N + Sbjct: 156 HRGGTPFPPVVTGDLNAR 173 >gi|254491099|ref|ZP_05104280.1| exodeoxyribonuclease III [Methylophaga thiooxidans DMS010] gi|224463612|gb|EEF79880.1| exodeoxyribonuclease III [Methylophaga thiooxydans DMS010] Length = 259 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 89/271 (32%), Gaps = 73/271 (26%) Query: 65 DADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR---KK 119 +AD+V +QE + VF + FY D+ ++ +A+ + Sbjct: 27 NADVVCIQETKAQIHQLEDAVFTPQGYHCFY----------HDAEKKGYSGVALYCRSEP 76 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + ++ P + + A R K+ V+ +++ S + + Sbjct: 77 DEVIVGMDNPEFDVEGRYIEA--RFG----------KLSVISLYMPSGSSKEERQQVKYR 124 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------------------ 221 C + + + + K S +VI GD+N I + + Sbjct: 125 -C------MDFFEIKMQEMKASGRDYVITGDWN--IAHKNEDIRNWKGNLKNSGFLPEER 175 Query: 222 ---DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQE 273 D + + D+ P+++ + + IDY ++ + + Sbjct: 176 AWLDKLFDEMGFVDAFRELPQQEHEYTWWSNRGQAWANNVGWRIDYHILSPSMKGTVKAT 235 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 R +R SDH P++IDYD+ Sbjct: 236 DI-----------YRDERFSDHAPLTIDYDY 255 >gi|148908559|gb|ABR17389.1| unknown [Picea sitchensis] Length = 303 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 14/85 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ +SWN N+L L + RT L + + LD D++ +QE+ A Sbjct: 51 EPLKFMSWNANSL-------LLRLKKNRTE-----LADFVQRLDPDVIAIQEVRIPAAGG 98 Query: 82 KVFPKNTWCIFYSTERLINHSKRDS 106 K + + ++ + Sbjct: 99 K--GGSKNQGELKDDTSSAREEKQT 121 >gi|298207487|ref|YP_003715666.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus HTCC2559] gi|83850123|gb|EAP87991.1| hypothetical protein CA2559_04510 [Croceibacter atlanticus HTCC2559] Length = 324 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 95/319 (29%), Gaps = 53/319 (16%) Query: 25 RLVSWNINTLSEQE-----------GVSLWKNSVKRTTSDYTLLRQYAKNLD-AD----- 67 + +N+ L + S K R + + ++ +D Sbjct: 16 TIAFYNVENLFDHIQDTNILDTDFIPTSDRKWDQNRYEKKLNKIAKVIASIGTSDTHKHP 75 Query: 68 --IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 I+ L E+ + + + S + H I TA+ RK V + Q Sbjct: 76 PLIIGLAEVENKKVLKDLVNTEA---LSSLKYDFVHYNSPDERGIDTALLYRKNYVNITQ 132 Query: 126 QSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSPSCSL 183 L + R R +++ + ++I L H S L E + S Sbjct: 133 SKSHELYIETPEGIRDFTRDILQVSCTLLQEQITFLVNHWPSRRDGSGLTEYKRVNAASK 192 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + L K++ F++ GDFN +D+ K++ Sbjct: 193 NKAILRALS-----KEQPNQRFIVMGDFN-----DDPHDNSIKSLIEFGLYNPMETLLTK 242 Query: 244 RCNANKNLRNKIPIDYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGKR---------- 291 K + D ++ + Y+ S +Y+ + +K R + Sbjct: 243 SKGTTKYKGHWNLFDQVIISHSFLKYQKKKLNFKSASIYDPEFLKQRHGKYKGTPHRTFG 302 Query: 292 -------LSDHCPISIDYD 303 SDH P+ + + Sbjct: 303 GRNYTGGYSDHFPVYVTLE 321 >gi|319411745|emb|CBQ73789.1| conserved hypothetical protein [Sporisorium reilianum] Length = 300 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 93/304 (30%), Gaps = 38/304 (12%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + + V+ N+ L L N ++ + + + D++ +QE Sbjct: 19 VSTAPTSTDSLTAVTMNVAGL----PAILNGNGEGDKQANSVAIGKKFVEYNYDVINVQE 74 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 +N A ++ + R + ++T + N+ ++ S L Sbjct: 75 --DFNYHAYIYNNDD-----HPYRTPTSGGVPFGSGLNTLSTIAFTNLDRVKWSKCNLNE 127 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 D + G V L G ++ V ++H+ + + + + + Sbjct: 128 GDCLTPKG--YTVVTLQLPTGGEVDVYNLHMDAG------SDDGDSAARTSN--FAQVAQ 177 Query: 194 WITQKKES-LVPFVIAGDFNRKINYLGNNDDF------------WKTIDPNDSLIRFPKE 240 I + ++ ++ GD N + Y D W + Sbjct: 178 AIASRSDAAGRAVIVMGDTNSR--YTRPKDGLVQFLAETKLTDTWVELVRGGKAPASTDA 235 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + + +D + ++ L + S+GK LSDH PI + Sbjct: 236 ALLCADPIPTTTDCEVVDKVLYKNSSTVTLRPSDWQ--YLGTQFTDSQGKPLSDHTPILV 293 Query: 301 DYDF 304 + + Sbjct: 294 KFAY 297 >gi|163756803|ref|ZP_02163912.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] gi|161323192|gb|EDP94532.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] Length = 344 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 94/310 (30%), Gaps = 77/310 (24%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNI------NTLSEQEGVSLWKNSVKRTTSDYTLL 57 +V +L F TA + ++S+N+ N + E + V +D+ Sbjct: 84 SHVTSLYKFSRNTTAPSQNSISVMSYNVRLFNIYNWIKETHVDKKIVDLVH---ADF--- 137 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D+V QE A F + + T A+ Sbjct: 138 --------PDVVAFQEFHKNQQAAFNFYTYKHVVL-------------KGKNKKTGQAIF 176 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENT 176 K V + S ++ A+ + + N I V ++HL+S E T Sbjct: 177 SKYPIVHKGSLEFPNTPNN--------AIYIDIVKNKDTIRVYNLHLQSLRINPQKEELT 228 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPF-----------VIAGDFNRKINYLGNNDDFW 225 S LL + A+ ++ F +I GDFN + + Sbjct: 229 QENSERLLKRMAKT----FKMQQSQAELFEINRKNCTYKKIILGDFN-----NSQFSNVY 279 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 KTI + + + ID+ ++D++ + + Sbjct: 280 KTIKGSMKDAFVEAGSGFGKTLD-YPFFPMRIDFVLVDES--------------FTVNKF 324 Query: 286 KSRGKRLSDH 295 K+ + SDH Sbjct: 325 KTFTEHYSDH 334 >gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-064] gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J1-175] gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] Length = 256 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 27/159 (16%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + +GK++++ + HL + S L + Q K I P ++ G Sbjct: 120 ADSDGKQVYIFNTHL----------DHISEEARLFASQLLLKKAAI---IAENSPVIVLG 166 Query: 210 DFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 DFN + N N + + + IDY + Sbjct: 167 DFNTQPNTPTYNYITEKYQDAQLISQKPAKGPT-GSFHDFHPLRPQNELEKIDYIFVS-- 223 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F Y + G SDH P++ + D+ Sbjct: 224 -------NEFKVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|37993825|gb|AAR06992.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 22/218 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFN-RKINYLGNND 222 Q + ++D+I K +V+ GD N +KIN N+D Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVKKINAENNSD 235 >gi|320334572|ref|YP_004171283.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319755861|gb|ADV67618.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 1195 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 58/280 (20%) Query: 64 LDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI----AVR 117 L+AD+V L E+ A+A + T+ L + + IHT A+ Sbjct: 564 LNADVVTLMEVQNNGDKALANL-----------TDALNAAVGAGTYDYIHTGTIGTDAIH 612 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKS-FCFLDSLEN 175 + P+ + + +R + + N + V+ HLKS S + Sbjct: 613 VAMIYKPANVTPVGAYRIDNNNVYSRPPLAQTFKDNHGGVFTVVANHLKSKGSCPTSGDI 672 Query: 176 TYSPSC-SLLS-QQAQWLKDWITQKKES--LVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 C + L QQAQ L +++ K + ++ GDFN GN D TI Sbjct: 673 DNGQGCWNTLRVQQAQALLNFVDTLKTATGDQDVLLMGDFN----AYGNEDPI-NTIVAG 727 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K + + +D+ + + + I +E + Sbjct: 728 G---FESLNKRIPAEDRYSYQFGSLFGYLDHALATNTLAGQVTGITEWHINSDEPTVADY 784 Query: 289 G------------------------KRLSDHCPISIDYDF 304 R SDH P+ + + Sbjct: 785 NVEFKNVPGCTSASCTGLDLYGPGPFRASDHDPVLVGLNL 824 >gi|187927447|ref|YP_001897934.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|309779851|ref|ZP_07674606.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] gi|187724337|gb|ACD25502.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|308921428|gb|EFP67070.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] Length = 248 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 45/249 (18%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 ++DADIVFLQE+ A++F N + Y + H+ + H A+ Sbjct: 33 SMDADIVFLQEVQDRNDRLVAAELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F S + Sbjct: 93 LSRFPILLSEN---LDISDH--RFEQRGLLHAVTDLGFGEVHLLCAHF--GLFARSRQ-- 143 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +QA+ L D + P V+AGDFN N+ +TI Sbjct: 144 ---------RQAEALVDRVRSVVPPDAPLVVAGDFN------DWNNRLDRTICQALGATE 188 Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +K + + + +P +D + + + + S Sbjct: 189 V-ADKAANARPVRTFPSHMPWLRLDRIYV--RGFDIERAHAL---------TGREWAQRS 236 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 237 DHVPLLAEL 245 >gi|150377362|ref|YP_001313957.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150031909|gb|ABR64024.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 353 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 100/336 (29%), Gaps = 74/336 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 ++ + ++N+ L+E G+S++ + + +Y + + L DI QE+ Sbjct: 5 RLSIGTFNLYNLNE-PGLSMYTDKTGWSQEEYDRKIEWTSRTIRLLHPDIFGFQELWHSA 63 Query: 79 AVAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 ++ + ++ + + I A VRK + Q Sbjct: 64 SIERALTQSGIAGDYDLIVPENADGKR--------IVCAAIVRKGLMISEPQWLKRFPEK 115 Query: 127 -------SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS----------- 166 P A + +R + V + + I V H KS Sbjct: 116 FTLKSSGDDPQTPAITVSIPSFSRPVLHFSVRPREDHEPIHVYVCHFKSKGPTKVFQEDW 175 Query: 167 ----FCFLDSLENTYSPSCSLLSQQAQWLK-DWITQKKESL--VPFVIAGDFNRKINYLG 219 + + S + + A+ +I ++ P ++ GD N + Sbjct: 176 FEADGALYKKHATSIGAAISTIRRTAEAAALRFILTEQMKGTRTPVIVLGDINDGQHSNT 235 Query: 220 NN------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNA 266 N + + + + +++ +D+ ++ + Sbjct: 236 ANILTEQPRYLVGDSLGGGDVSLYTAQTLQEYRSTRDVYYTHVHQDIMESLDHILVSEEF 295 Query: 267 YK------FLIQE-SFSEILYNEDDIKSRGKRLSDH 295 Y ++ + + N DD K G SDH Sbjct: 296 YDNSRRRVWMFDGMTVNNDHLNSDDHKEAGT--SDH 329 >gi|78189393|ref|YP_379731.1| hypothetical protein Cag_1431 [Chlorobium chlorochromatii CaD3] gi|78171592|gb|ABB28688.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 331 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 88/297 (29%), Gaps = 57/297 (19%) Query: 22 QKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-------------- 65 QK+ ++ WN+ L ++ + ++ ++ + Y K + Sbjct: 21 QKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQM 80 Query: 66 ---ADIVFLQEMGS----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 DI+ E+ + + V + ++Y++ I A+A Sbjct: 81 GSLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDPR---------GIDVALAYNS 131 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +++ + K R V + + +L H S F L Sbjct: 132 ATLKLQHSKAYSVPLKH-----PTRPVVVASFMVGRHPLHLLLNHWPSRAFDAELSEPNR 186 Query: 179 PSCSLLSQQA--QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + +++ L V+ GD N + + ++D + Sbjct: 187 IAAATIARHIVDSLLTA------NPKADVVVMGDMNDEATNRSLANTLGSSMDGV-QVKA 239 Query: 237 FPKEKDSRCNANKN----LRNKI---PIDYFVMDQNAYK----FLIQESFSEILYNE 282 + C + N + ID+ ++ ++ +E+F I Y Sbjct: 240 AKGKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPA 296 >gi|56460629|ref|YP_155910.1| extracellular nuclease [Idiomarina loihiensis L2TR] gi|56179639|gb|AAV82361.1| Extracellular nuclease [Idiomarina loihiensis L2TR] Length = 589 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 98/325 (30%), Gaps = 72/325 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEMGS 76 +R+ S+N+ R +++ K + DAD++ L E+ + Sbjct: 288 LRIASFNVLNF-FNGNGVGQGFPTPRGADTPEQMQRQQKKIVAALTAIDADVIGLMEIEN 346 Query: 77 ------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKNVRV 123 A+ K K+ + D T I + + V+ Sbjct: 347 DGFGERSAIMQLVKALEKASGKDY--------AIAEPRAEKIGTDQITVGIIYQPQRVKP 398 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSP-- 179 + S+ + GK+ V+ H KS C DS + Sbjct: 399 NSHAIFTRQGPFSWGSRPPLAQSFIDANT-GKEFSVVVNHFKSKGSCPEDSESPNSNQND 457 Query: 180 --SC-SLLSQQA-QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 +C + L Q+ + L WI + + V+ GDFN Y D + Sbjct: 458 GQACWNDLRLQSSRELIQWIQSESLANS--VLLGDFN---AYY-----------QEDPVR 501 Query: 236 RFPKEKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 F + K+ +D+ + + + + + +N D+ + Sbjct: 502 YFADNGFYNPSGAKDYSYVYDSQAGALDHVFVTDSLKDAI--QEVYHLPFNADEPQLYDY 559 Query: 291 R-----------LSDHCPISIDYDF 304 R SDH P+ +D F Sbjct: 560 RDEAYFAEGPFRSSDHDPLVLDLVF 584 >gi|330960959|gb|EGH61219.1| exonuclease III [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ + + H +A+ +N + +D+ R R Sbjct: 38 ---SDEQFPHADIEALGYHVHFHGQKGHYGVALLSRNPPLELHKGFEGDNEDAQKRF-IR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A + NG+ I +++ F + + + L+ + + + Sbjct: 94 GAYA---DSNGQPIIIMN-----GYFPQGESRDHPTKFPAKQRFYEDLQQLLESRFSNEQ 145 Query: 204 PFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLIR 236 P ++ GD N R + + W +D L Sbjct: 146 PLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGMVDSFRYLHP 205 Query: 237 FPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ S + + + ID + + D ++ Sbjct: 206 EVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|28870665|ref|NP_793284.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213969036|ref|ZP_03397176.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|28853913|gb|AAO56979.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213926335|gb|EEB59890.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 237 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 45/256 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ ADIVFLQE+ + +V + + S + + D Sbjct: 19 LREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 78 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +L + ++ + +HL F Sbjct: 79 DHGNALLSKYPIIQHENL-DVSIDGTEQRGLLHC---ILQVPDHGQVHAVCVHL--GLFE 132 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTI 228 QQ + L + + P ++AGDFN D + Sbjct: 133 SHRR-----------QQLKLLAQLMD-RLPEGAPVIVAGDFN---------DWRQRADAL 171 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ K+ + P+ +D+ + + Sbjct: 172 LQGTGLHEVFVQRFGA--PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRP 221 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 222 WSHLSDHAPLAVEVTL 237 >gi|33861041|ref|NP_892602.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639773|emb|CAE18943.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 281 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 92/306 (30%), Gaps = 73/306 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + +WN+N RT + + + K ++ DI+ LQE + + Sbjct: 3 IATWNVN--------------SVRTR--LSQIINWIKEVNPDILCLQETKVIDDAFPSSH 46 Query: 84 FPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + + ++ N + ++ K G Sbjct: 47 FEELGYEVIIHGQKSYNGVAIISKFKIENVKKGFTNENKT-----------GGISIDINE 95 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + EING + ++++++ + +DS + Y Q +L ++ + + Sbjct: 96 QKRL---ISAEING--LKIINVYVPNGSSIDSEKYDYKI------QWLNYLSAFLDDQVK 144 Query: 201 SLVPFVIAGDFN--------RK--------INYLGNNDDFWKTIDPN--DSLIRFPKEKD 242 + + GDFN + + + DS F K Sbjct: 145 NDDLVCLVGDFNIAPSEIDIHTPQKYEGGIMASKIEREALNNVLKGRFIDSFRIFEKNTG 204 Query: 243 SRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N NK ID+ + +N L + SDH P Sbjct: 205 HWSWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSCVIERNQ-------RENLQPSDHAP 257 Query: 298 ISIDYD 303 + I+ + Sbjct: 258 VLINLE 263 >gi|299144741|ref|ZP_07037809.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515232|gb|EFI39113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 611 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 90/304 (29%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S ++ + + ER H+ I + Sbjct: 53 NNASPDVVAIQEVDSMTRRSR----QKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + C SL Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYC-----------------CTHLSLTEEDR 151 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I P +AGD N DF K + + ++ P Sbjct: 152 ------MKSLEIVKSLI---ASYKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ A K IDY + S + SDH PI Sbjct: 198 EKHTYPAPAPK-----ETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|331015775|gb|EGH95831.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 233 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 81/256 (31%), Gaps = 45/256 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSY--NAVAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ ADIVFLQE+ + +V + + S + + D Sbjct: 15 LREAVRSVSADIVFLQEVHGEHHSHARRVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +L + ++ + +HL F Sbjct: 75 DHGNALLSKYPIIQHENL-DVSIDGTEQRGLLHC---ILQVPDHGQVHAVCVHL--GLFE 128 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTI 228 QQ + L + + P ++AGDFN D + Sbjct: 129 SHRR-----------QQLKLLAQLMD-RLPEGAPVIVAGDFN---------DWRQRADAL 167 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ K+ + P+ +D+ + + Sbjct: 168 LQGTGLHEVFVQRFGA--PAKSFPARWPL--LRLDRIYVRNATSHRPKVLS------SRP 217 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 218 WSHLSDHAPLAVEVTL 233 >gi|239979144|ref|ZP_04701668.1| hypothetical protein SalbJ_06897 [Streptomyces albus J1074] gi|291451021|ref|ZP_06590411.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291353970|gb|EFE80872.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 341 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 89/305 (29%), Gaps = 80/305 (26%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L LV ++ + + + N+N + T D A Sbjct: 109 LNLFGGLVTDKSATGGDLTVATHNVNADNPDPAA---------TARDLAA-------SGA 152 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V L+E+ S AV + R++ + AV + L Sbjct: 153 DVVALEEL-SPEAV--------------------PAFREALAATYPHHAV--EGTVGLWS 189 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLS 185 YPL + G RA+ V+ + V HL S +D+ S Sbjct: 190 KYPLSATAPVDIKLGWTRALRSTVDTPSGPLAVYVAHLPSVRVKVDAGFTAGQRDSS--- 246 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ L I + E L V+ GD N +N + P S +R + Sbjct: 247 --AEALGLAI--RGEELDRVVLLGDLNGTMNDRA--------LSPVTSQMRSTQGAAGNG 294 Query: 246 ----NANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID ++ + + + SDH PI+ Sbjct: 295 FGFSWPASFPMAR--IDQIMVQGVEPVSSWTLPRTA-----------------SDHLPIA 335 Query: 300 IDYDF 304 F Sbjct: 336 ARISF 340 >gi|330501089|ref|YP_004377958.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328915375|gb|AEB56206.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 290 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 83/249 (33%), Gaps = 48/249 (19%) Query: 57 LRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L++ A L D D+V LQE+ + + + + + + + + N ++ A Sbjct: 71 LQRIADLLADFDLVALQEVDGGSLRSGYVNQVEY---LAQQGAFPYWYQQLNRNLGR-FA 126 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V + P L R A+ L + + + V+ +HL Sbjct: 127 QHSNGVLSRLR--PTLLEDHPLPGPPGRGAIFLRLGEGEQALGVVMMHLALGA------- 177 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 ++Q +I ++ V+ GD N L N L Sbjct: 178 ------RTRTRQL----AYIRERVSEFRHLVLMGDMNTHAVDLLENSPL-------RDLG 220 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ++ + R + +D+ ++ SE+ D+ S+ +SDH Sbjct: 221 LLAPQVEATF---PSWRPQRCLDHILLS------------SELELGRVDVLSQP--ISDH 263 Query: 296 CPISIDYDF 304 P++++ Sbjct: 264 LPVAVEIRL 272 >gi|146310939|ref|YP_001176013.1| endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] gi|145317815|gb|ABP59962.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] Length = 253 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 53/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + + + +P T F + +++ + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEIHPMHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV + + + +S R + I V +HL Sbjct: 93 HHGNAVLSRFP-IEHYENRDVSVGESEKRGLLY--CRITPPELAFPIHVGCVHL------ 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKINYLGNNDD 223 L + + Q + W+ P V+AGDF N + D+ Sbjct: 144 -GLREAHRQA------QLNMMAKWVNAL-PEGEPVVVAGDFNDWRQRANHPLKAQAGLDE 195 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + P+ +D+ K S + + Sbjct: 196 IF---------------TRAHGRPARTFPVSFPV--LRLDRIYVKNAHASSPTAL----- 233 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 234 -ALRTWRHLSDHAPLSAEIHL 253 >gi|24373409|ref|NP_717452.1| extracellular nuclease, putative [Shewanella oneidensis MR-1] gi|24347681|gb|AAN54896.1|AE015627_14 extracellular nuclease, putative [Shewanella oneidensis MR-1] Length = 948 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 105/339 (30%), Gaps = 58/339 (17%) Query: 15 PCTASVAQK--VRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDA 66 P + +A+ +++ S+N +N + G T S++ + + + A Sbjct: 449 PQSPVLAEGGNLKVASFNVLNYFNGDGQGSGFPTARGANTLSEFERQKTKIISAMVGIGA 508 Query: 67 DIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 D+ L E+ + + +N + + N+ + I + Sbjct: 509 DVFGLMEIENDGFGANSAIADLVAGLNTAVGENRYAYVI-PKINGNNLSAIGTDAITVGL 567 Query: 115 AVR------KKNVRVLQQSYPLLGAKDS--FSRAGNRRAV--ELLVEINGKKIWVLDIHL 164 R + + R+L + L F NR + ++ + + + V HL Sbjct: 568 IYRSDKVSPQGDARILSSTNSPLDETGQPLFDDGKNRPMLTQAFVLNGSEEALVVAVNHL 627 Query: 165 KSF---CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 KS C D N +C+ ++ A WI + ++ GD +N Sbjct: 628 KSKGSECAGDPDVNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGD----LNAYAK 682 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + F K + + + +D+ + + ++ + I Sbjct: 683 EDPL-TALANTGFSELFAKLEKANAYSYVFSGESGQLDHALANAALVDKVVDVTEWHINT 741 Query: 281 NEDDIKSR-----------------GKRLSDHCPISIDY 302 +E + R SDH P+ I Sbjct: 742 DEPRVLDYNEEFKTPTQVQDLYASDAYRSSDHDPVVISL 780 >gi|228995734|ref|ZP_04155396.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228764016|gb|EEM12901.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 263 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 61/194 (31%), Gaps = 31/194 (15%) Query: 50 TTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAVAKVFPKNTWC----IFYSTERLINHS 102 + +R AK + D++ LQE+ V + + + Sbjct: 13 EENQIEKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSG 72 Query: 103 KR-------DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 DI+ A+ K+ V Q S+ + +KD+ R+ V V G Sbjct: 73 NYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSY-WKARKIVSATVSYKG 131 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 K + HL + D E Q L + +K+ S ++ GDFN Sbjct: 132 KNMTFYSCHL--GWWNDEEE--------TFQGQVDCLTQHVNEKELS----ILMGDFNNN 177 Query: 215 INYLGNN-DDFWKT 227 G D + Sbjct: 178 ARLQGEGYDYLMQK 191 >gi|37993822|gb|AAR06990.1| sphingomyelinase [Bacillus cereus W] gi|37993843|gb|AAR07004.1| sphingomyelinase [Bacillus anthracis] gi|37993846|gb|AAR07006.1| sphingomyelinase [Bacillus anthracis] gi|37993848|gb|AAR07007.1| sphingomyelinase [Bacillus anthracis] Length = 252 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 76/209 (36%), Gaps = 21/209 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK 214 Q + ++D+I K +V+ GD N Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVN 226 >gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 120 -----NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLTAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|227536399|ref|ZP_03966448.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243775|gb|EEI93790.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 279 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 101/312 (32%), Gaps = 47/312 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++A VF + T + AQ+ R+ ++NI + + ++W L Sbjct: 1 MRKTIIATVFVALVSTMTYAQQFRIATYNIRQKNTHDIGNMWDERK-------EALTNLI 53 Query: 62 KNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 K + +I QE + ++ P + I + + + V K Sbjct: 54 KFHEFEIFGTQEGFNDQLVDMERLLPGFKY-IGVGRDDGAEKGEYSAIFYDTKRFEVSKS 112 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTY 177 L + K + A R + + K+ +++ H F Sbjct: 113 GTFWLSATDISKPNKGWDA-ALPRICTWGIFKDKKTKKQFILMNTH-----FDHVGVTAR 166 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S L+ +A+ +P +I GDFN + D+ + T+ + + Sbjct: 167 KESAKLMMAKAKEF--------AGNLPLIITGDFN-----VSETDEAYFTLANSGIVADS 213 Query: 238 PKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + DSR N ID+ I FS Y GK Sbjct: 214 YSKIDSRYAPNSTFNGFGKSIKPTERIDHIF---------ITPQFSVKKYGILTDTYVGK 264 Query: 291 RLSDHCPISIDY 302 SDH P+ +D Sbjct: 265 YPSDHFPVMVDL 276 >gi|311900561|dbj|BAJ32969.1| hypothetical protein KSE_72140 [Kitasatospora setae KM-6054] Length = 296 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 72/288 (25%), Gaps = 72/288 (25%) Query: 61 AKNLDADIVFLQEMGSYN----------AVAKVFPKNTWCIF--YSTERLINHSKR---- 104 A LDAD++ LQE+ AVA+ W Sbjct: 37 ATALDADVLALQELDRRQDRTGHTDQARAVAEATGATDWRYATALHARAAPGRRWEPDPA 96 Query: 105 -------------DSNNDIHTAIAVRKKNVRV-----------LQQSYPLLGAKDSFS-R 139 +A+ + + L P+ G R Sbjct: 97 EPGLRLYGPPGTGHDGQSPSHGVALITRLPVLAWHAHRLPASPLAAPLPMPGRPGLTVVR 156 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+ ++ + +HL L N +Q ++ WI Sbjct: 157 DRPRAALAAVLRGRRGPFTAVVLHL----SLFPGSNV---------RQLLAVRRWI---A 200 Query: 200 ESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P ++ GDFN R D +R R ++ Sbjct: 201 DLPRPHLLLGDFNLGGRLPATALRAADLLTPAGAGTPGGPAGWHDLARARTFPAHRPRLQ 260 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ + + + LSDH P+ +D Sbjct: 261 LDHILASGLPRD--HPHTAHYLRLP----------LSDHRPLVVDLPL 296 >gi|71083659|ref|YP_266379.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] gi|71062772|gb|AAZ21775.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] Length = 258 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 78/305 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N++ + +++Y + D+V +QE+ + + + FP Sbjct: 3 ITSWNVNSVRAR----------------IENIKEYLQKFSPDVVMMQEIKTQD---ETFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + +++ + +A+ + L K + +++ Sbjct: 44 YDDF-------SALDYESHVFGQKSYNGVAI--------ISKHKLENVKIDLIKDKLKQS 88 Query: 146 VELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---E 200 + E+ KK I +++I+ + +D+ + TY + WL I Q K + Sbjct: 89 RIISAELKHKKKNIQLINIYTPNGNPVDTDKYTYKKN---------WLDKLIKQLKTLSK 139 Query: 201 SLVPFVIAGDFN--------RKIN-------YLGNNDDFWKTIDPND--SLIRFPKEKDS 243 ++AGDFN I Y ++ + R + Sbjct: 140 KNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKE 199 Query: 244 R------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + ID+F++ + + + ++ + SDH P Sbjct: 200 GYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINKDP-------RGKGKPSDHTP 252 Query: 298 ISIDY 302 I I+ Sbjct: 253 IEIEL 257 >gi|148539953|ref|NP_079994.2| deoxyribonuclease-1-like 2 precursor [Mus musculus] gi|59797962|sp|Q9D1G0|DNSL2_MOUSE RecName: Full=Deoxyribonuclease-1-like 2; AltName: Full=Deoxyribonuclease I-like 2; Short=DNase I-like 2; Flags: Precursor gi|12834394|dbj|BAB22893.1| unnamed protein product [Mus musculus] gi|76779307|gb|AAI06189.1| Dnase1l2 protein [Mus musculus] Length = 278 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 77/248 (31%), Gaps = 38/248 (15%) Query: 67 DIVFLQEMGSYN--AVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 DI +QE+ + AV+ + K+ + S RD +++ RK Sbjct: 54 DIALVQEVRDPDLSAVSLLMEQINRVSKHEYGFVSSK-----PLGRDQYKEMYL-FVYRK 107 Query: 119 KNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V+ YP S + +V K++ ++ +H Sbjct: 108 DVASVVSTYQYPDPEDAFSREPFVVKFSVP---SCATKELVLIPLH-----AAPHQAVAE 159 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + W + + GDFN Y+ +D + ++ Sbjct: 160 IDALYDVY--LDVIDKW------NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSEVFKWL 211 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--SD 294 + N + D V+ + L S S + E+ + + L SD Sbjct: 212 IPDSADTTVGNSDCAY----DRIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISD 267 Query: 295 HCPISIDY 302 H P+ + + Sbjct: 268 HFPVEVTF 275 >gi|91225419|ref|ZP_01260541.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01] gi|91189782|gb|EAS76055.1| hypothetical protein V12G01_08830 [Vibrio alginolyticus 12G01] Length = 317 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 30/302 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---RQYAKNLDADIVFLQEMGSYNA 79 ++ V+ N+ ++ L ++ + L+ D++ LQE+ S Sbjct: 6 RITFVTANLFNFVAPPNAYYDFENIYSLEQWRDKLSWTQRQVEKLEGDVIGLQEVFSIEK 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG----AKD 135 F + F + + + + AIA R +V + L Sbjct: 66 TQAFFSTIGYPYFATVDT-PHVEDEYIYSSPVVAIASRFPIEKVQAVEFDLATLEPFGVS 124 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC--SLLSQQ-----A 188 + ++ I V HLKS DS + S + LS Q A Sbjct: 125 VAPEFSRKPIYAQVIHPVLGHIAVYVTHLKSQRPADSEQPETSSTIIGRWLSTQQRGWEA 184 Query: 189 QWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 L+D + ++ ++ +P V+ GD N+ I + N + + ++ + Sbjct: 185 AMLRDAMQKRYRKEPMPTVLMGDMNQPITPISVNSALVSNTGDSVTELQLKDGWLLQSAP 244 Query: 248 NK--------NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD------IKSRGKRLS 293 K + +DY ++ Q + Y + I R K S Sbjct: 245 LKDERPATHYHFSTGNVLDYILLSQEFDTLSDISVAEVVDYQVSNQHLINPIYDRDKNAS 304 Query: 294 DH 295 DH Sbjct: 305 DH 306 >gi|324511094|gb|ADY44630.1| 5'-tyrosyl-DNA phosphodiesterase [Ascaris suum] Length = 322 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 91/280 (32%), Gaps = 56/280 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAK 82 ++SWN++ L N R +T + + A+ VFLQE+ + + Sbjct: 82 TVLSWNVDGL-------DKGNLKTR----FTAICYIISKVSAEAVFLQELAPELVPELRR 130 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + I ST T I ++ + + P ++ +G Sbjct: 131 NLGG-EYSILLSTPSQP----------YFTGILLKPNVEYISHKCIP-------YANSGM 172 Query: 143 RRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RA+EL+ +I + +L+ HL+S + + C LK+W + Sbjct: 173 GRAMELVEAKIGNMDVRLLNTHLESMKESSEIRKSQLQQCFT------QLKEWNDGRT-- 224 Query: 202 LVPFVIAGDFNRKINYLGN------NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V GD N + N +G + +P + D++ R Sbjct: 225 --LIVFGGDLNIRDNEVGELPEGFLDAWVAAGSNPKCRFTWDTRLNDNKQAGGARCRF-- 280 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + + SF +D I+ SDH Sbjct: 281 --DRLFFNGGGVFSSVDFSFE----GQDRIRRTLCFPSDH 314 >gi|313109395|ref|ZP_07795356.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016] gi|310881858|gb|EFQ40452.1| putative nuclease or phosphatase [Pseudomonas aeruginosa 39016] Length = 379 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 97/327 (29%), Gaps = 60/327 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKN 63 V Q +++++WNI L+ + + + +R T++ + + ++ Sbjct: 63 VAPALKPGQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRD 122 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN-------------------HSKR 104 D+V LQE+ ++ + + ER+ + H Sbjct: 123 EQPDLVLLQEIDDGSSA----TDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFG 178 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDI 162 T R + ++ P G R A+ + G ++ VL+ Sbjct: 179 SVGRKQAT--LSRYRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLNA 236 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------- 212 F N L +Q + + + + + P+++ GD N Sbjct: 237 R-----FDRPQANDD-----TLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYL 286 Query: 213 -RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 + D + ++ +E D V + + Sbjct: 287 LAPLRAPYREDSELAVLSGRFPMVPSLEEASGVDQVRWYTHFPN--DPRVQGPDRTLDYL 344 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 S S + +S ++S+H P+ Sbjct: 345 FHSPSLTRLDARVRRSDTLQISNHLPL 371 >gi|86610191|ref|YP_478953.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558733|gb|ABD03690.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 840 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 96/340 (28%), Gaps = 74/340 (21%) Query: 18 ASVAQKVRLVSWNI-------------NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 SV +R+ S+N+ N S Q + + + +R L + + + Sbjct: 335 PSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRD-----KLIEAIRRM 389 Query: 65 DADIVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 DADIV L E+ + N + +V T+ + + I Sbjct: 390 DADIVGLNELENDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLG------GDAITN 443 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR---AVELLV--EINGKKIWVLDIHLKSF 167 + V + + P F++ R + + N V+ H KS Sbjct: 444 GFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPLAVTFRQRSNNATFTVVVNHFKSK 503 Query: 168 CFLDSLENTY--SPSC---SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------ 214 + +C + AQ L W+ + +I GD N Sbjct: 504 VSPCDPIDNDPFQGNCNGNRT--RAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDPI 561 Query: 215 --------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI--DYFVMDQ 264 IN G N + SL S K I D V Sbjct: 562 KTLEAGGFINLNGPNSYSFSFQGQWGSLDHALAN--SSLRPQVTGSAKWHINADEPVSLD 619 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F + Y D +S SDH P+ + + Sbjct: 620 YTLSFKSPSQ-QSLFYASDPFRS-----SDHDPVLVGLNL 653 >gi|88854827|ref|ZP_01129493.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] gi|88815988|gb|EAR25844.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] Length = 1422 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 48/324 (14%) Query: 14 VPCTASVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 V V ++ ++N+ TL ++ + ++ ++ + + +LDAD+V Sbjct: 306 VASAPLVGGDFKVSAFNVFNYFTTLKSEDPDARGASTAEQFAIQQSKIVAAINSLDADVV 365 Query: 70 FLQEMGS--------YNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LQE+ + A+ + TW + L + + D + Sbjct: 366 GLQEIENSIKLGGGLDEALMDLVGALNAAAGAGTWDYVRTPAELNDAAITDFITN----- 420 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK----SFCFL 170 A+ K V D R + + NG+ I V+ H K S Sbjct: 421 AIIFKPASVTPVGD-SFTQVDETVWDIAREPIAQTFDSNGELITVIANHFKSKGGSGAEP 479 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTI 228 + ++ + + L D I+ V+ GDFN D + + Sbjct: 480 ADGQGRFNTERVEQATAVKALVDTISADSAKSDQVVLVGDFN----SYSEEDPVQVFTSA 535 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 D+L + + + +D+ ++ + + + I E + Sbjct: 536 GYVDTLAASTDGQYTYTFDGEL----GSLDHIIVSPSLADKVTDAAVWNINSPEWGDRGY 591 Query: 289 G---------KRLSDHCPISIDYD 303 R SDH PISI Sbjct: 592 AFGATEAGTVFRSSDHDPISIGLS 615 >gi|182678385|ref|YP_001832531.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] gi|182634268|gb|ACB95042.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] Length = 258 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 95/312 (30%), Gaps = 88/312 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN + +RT L +Y + DIV LQE Sbjct: 1 MQIATWNIN------------SIRQRTE----HLLRYLDEVAPDIVCLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + +A+ K ++ P + R Sbjct: 35 LKCTDDAFPFAAIEAKGYHAAVHGQKGFNGVAILSKQPIEVKCGLPGDSTDEH-----AR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES-- 201 VE +++ ++ ++ ++L + D+ + TY + W+ + Sbjct: 90 Y-VEGVIDSEIGRLRIVSLYLPNGNPPDTDKYTYKLA-------------WMDRLIAHAS 135 Query: 202 -----LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----------- 245 V+AGD+N D + + D+L P R Sbjct: 136 TLLQCEELLVLAGDYN---VIPMPGDCYDPAVWATDALFLPPTRARFRSLLNLGFTNALR 192 Query: 246 --------------NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 A RNK ID+ ++ A L ++ +++ + Sbjct: 193 AVSDEPGLYTFWDYQAGAWQRNKGICIDHLLLSPQAVDHL-----QHVVIDKE--RRGED 245 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 246 KPSDHVPVRVTL 257 >gi|116051998|ref|YP_789159.1| hypothetical protein PA14_12670 [Pseudomonas aeruginosa UCBPP-PA14] gi|254242644|ref|ZP_04935966.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192] gi|296387516|ref|ZP_06876991.1| hypothetical protein PaerPAb_05157 [Pseudomonas aeruginosa PAb1] gi|115587219|gb|ABJ13234.1| possible nuclease or phosphatase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196022|gb|EAZ60085.1| hypothetical protein PA2G_03405 [Pseudomonas aeruginosa 2192] Length = 379 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 96/320 (30%), Gaps = 60/320 (18%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLIN-------------------HSKRDSNNDIH 111 LQE+ ++ + + ER+ + H Sbjct: 130 LQEIDDGSSA----TDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQA 185 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 T R + ++ P G R A+ + G ++ VL+ F Sbjct: 186 T--LSRYRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLNAR-----F 238 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------RKINYL 218 N L +Q + + + + + P+++ GD N + Sbjct: 239 DRPQANDD-----TLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAP 293 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ++ +E D V + + S S Sbjct: 294 YREDSELAVLSGRFPMVPSLEEASGVDQVRWYTHFPN--DPRVQGPDRTLDYLFHSPSLT 351 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 + +S ++S+H P+ Sbjct: 352 RLDARVRRSDTLQISNHLPL 371 >gi|254251164|ref|ZP_04944482.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124893773|gb|EAY67653.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 271 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 72/217 (33%), Gaps = 43/217 (19%) Query: 12 FLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +P A + VSWN++ G + W +R + ++ AD+ Sbjct: 6 LSLPFAEPQAAPDEITAVSWNLHKGRSPLGFTAW-----------NAMRNWMQSTHADVY 54 Query: 70 FLQEMGSYNAVAKVFPK-------NTWCIFYSTERLINHSKRDSNNDIHTAIAV-----R 117 FLQE + V + + + + R + I V R Sbjct: 55 FLQEAMARRMPRPVLAPGFGAPMDDAYDDVWHCQAT--EIARALDWQIALGPNVFKPSWR 112 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 N + L G D + RR + + + + +L HL Sbjct: 113 HGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHL----------- 161 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + L +Q W+ WI ++ S P V+AGDFN Sbjct: 162 ALTRAARL--RQMNWIAHWI-ERNASDGPLVLAGDFN 195 >gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTLNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. 'Ames Ancestor'] Length = 583 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 284 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 334 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 335 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 393 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 394 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 452 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 453 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 511 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 512 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 563 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 564 HGRVSDHDPVLAQIDL 579 >gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str. A2012] gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. CDC 684] gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. Sterne] gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 788 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|255033851|ref|YP_003084472.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254946607|gb|ACT91307.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 365 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 71/315 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A A++ ++++N++ G WK+ VKR + ++ + + AD++ + E Sbjct: 93 TAAEGAKEFSVMNYNVHVFQRNSGA--WKSEVKR---EIRKMKSWIIDSQADVICMPEYF 147 Query: 76 SYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + + V F N + ++ K+ + +AV YP Sbjct: 148 NDDELKGVLDTRNYFSANGYQ-----YNALHSQKKQGKRKGYWGLAV--------FSKYP 194 Query: 130 LLGAKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-----FCFLDSLE--------- 174 ++ +D F ++ V + + VL +HL S + E Sbjct: 195 IVAVRDTVFEEQNGMIQTDIKVGED--TVRVLALHLYSMTLQLGALVAQKEMDGIKREGR 252 Query: 175 ---NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTI 228 + + + + ++ W+ Q S P ++ GDFN Y + Sbjct: 253 ITFGKMKNGFTRRAAEYEIVQSWVDQ---SPYPLIVCGDFNEVPYGYVYGKLRKHLRNSF 309 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + F + + I ID+ D + +FS++ Y Sbjct: 310 EEKGRGFGFTYNQ---------IPYFIRIDHQFYDDSRLSLHAFRTFSKVPY-------- 352 Query: 289 GKRLSDHCPISIDYD 303 SDH PI Y Sbjct: 353 ----SDHNPIMGTYT 363 >gi|114764770|ref|ZP_01443953.1| alkaline phosphatase [Pelagibaca bermudensis HTCC2601] gi|114542819|gb|EAU45841.1| alkaline phosphatase [Roseovarius sp. HTCC2601] Length = 2191 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 105/337 (31%), Gaps = 70/337 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSD-----YTLLR-QYAKNLD 65 V + ++ + S+N+ L ++ ++ + D + + Q NL+ Sbjct: 1609 VSTLTAGEGELLIASYNVLNLDPVIEDEANILPGTYNAVDDDLGDGRFDAIANQIVSNLN 1668 Query: 66 -ADIVFLQEM-----------------------GSYNAVAKVFPKNTWCIFYSTERLINH 101 DI+ LQE+ S A T+ +T + Sbjct: 1669 TPDIIGLQEIQDNTGAEGTDDVTSASDTLQQLIDSIAAA----GGPTYAYIDNTFIADDT 1724 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVL 160 S +I TA + V V++ S + ++D+ + G R + +++ V+ Sbjct: 1725 SGGIPGGNIRTAYLYNPERVSVVEGSVRTISSQDAGAAFEGGRLPLVASFAFGDEEVTVV 1784 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV--------------- 203 + H KS + Q+ + + +++ Sbjct: 1785 NNHFSSKSGSAPIMGIDQEFAD----LQEDPSVNGAVDERQAQSAEVQGFVDELLAEDGA 1840 Query: 204 -PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFV 261 V+ GDFN + ++ ++ L+ + + + N +D+ + Sbjct: 1841 ANVVVLGDFN-EFEFVSPLEEL-----EGSGLVNLTNSLPEDERYSYSFQGNSQSLDHIL 1894 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + N ++ + + SDH P+ Sbjct: 1895 VSNNLGLDAEFDAVHV----NSEFAVTDESASDHDPV 1927 >gi|34500277|gb|AAQ73759.1| deoxyribonuclease I-like 2 short form [Homo sapiens] gi|34500279|gb|AAQ73760.1| deoxyribonuclease I-like 2 short form [Homo sapiens] gi|119605934|gb|EAW85528.1| deoxyribonuclease I-like 2, isoform CRA_b [Homo sapiens] Length = 278 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 78/249 (31%), Gaps = 37/249 (14%) Query: 67 DIVFLQEMGSYN--AVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D+ +QE+ + AV+ + ++ + S RD +++ RK Sbjct: 54 DLALVQEVRDPDLSAVSALMEQINSVSEHEYSFVSS-----QPLGRDQYKEMYL-FVYRK 107 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V V+ Y +D FSR V+ + + ++ +H Sbjct: 108 DAVSVVDT-YLYPDPEDVFSREP--FVVKFSAPGTAQNLVLIPLH-----AAPHQAVAEI 159 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + + W + GDFN +Y+ D + ++ Sbjct: 160 DALYDVY--LDVIDKW------GTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLI 211 Query: 239 KEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 + N + D V + L +S + + E+ + + L SDH Sbjct: 212 PDSADTTVGNSDCAY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDH 267 Query: 296 CPISIDYDF 304 P+ + F Sbjct: 268 FPVEVTLKF 276 >gi|21232876|ref|NP_638793.1| hypothetical protein XCC3447 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767053|ref|YP_241815.1| hypothetical protein XC_0717 [Xanthomonas campestris pv. campestris str. 8004] gi|21114707|gb|AAM42717.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572385|gb|AAY47795.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 288 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 86/279 (30%), Gaps = 35/279 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N+ V + + KR + + K D+ QE+ S A Sbjct: 34 PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86 Query: 83 VFPKNTWCIFYSTERLINHSKRD-SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F R + + D T V N + P + ++ Sbjct: 87 AAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWL--SDTPEVAGSITWGNVL 144 Query: 142 NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R L E + ++ ++ + H + D E S L+ + L Sbjct: 145 PRMVTWALFERRSDKRRFYLFNTHFP---YRDEDEPAREHSARLILSRIAQLPA------ 195 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 +P V+ GDFN + D K P + + + + + + Sbjct: 196 --DIPVVLTGDFN------SDPD---KITYPTLTAVLGDARARAPKRSGPENTFQDFSTH 244 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +++ + + D + G SDH P+ Sbjct: 245 ---PTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPV 280 >gi|13472690|ref|NP_104257.1| hypothetical protein mll3063 [Mesorhizobium loti MAFF303099] gi|14023437|dbj|BAB50043.1| mll3063 [Mesorhizobium loti MAFF303099] Length = 302 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 97/317 (30%), Gaps = 60/317 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LVS+NI S R D + + ADI+ LQE+ Sbjct: 1 MKLVSYNIQY---------GFGSDGR--YDLSRAARIVD--GADIIALQEVERHWQRSRF 47 Query: 75 -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 ++++ W + + R N V K V L Sbjct: 48 DDQPELLSRLLSGYHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIV-WSRLHAL 106 Query: 132 GAKDSFSRAGNR-RAVELLVEINGKKIWVLDIHL---KSFCFLDSLENTYSPSCSLLSQQ 187 + + R A+E ++ + VL +HL + L+ ++ + S+ Sbjct: 107 PMRRTLRPLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSEG 166 Query: 188 AQWLK-------DWITQKK--ESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDP 230 W +W + + E+ + + GDFN R+I +D Sbjct: 167 GPWSGIDDEPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDG 226 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-- 288 E + ++ ++D K + F ++ R Sbjct: 227 FVDAAAVAIELAGDFHTHEK----------IIDGRLAKRRLDHCFVGGVFARRVRSVRSD 276 Query: 289 -GKRLSDHCPISIDYDF 304 G+ SDH P+ +D D Sbjct: 277 IGEMASDHFPVRVDIDL 293 >gi|313886230|ref|ZP_07819959.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924301|gb|EFR35081.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 390 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 64/268 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y DADI+ LQE ++ + + S L H + +A AV+ Sbjct: 154 DYLAESDADIICLQE----AWLS-----DNDSKYMSERSL--HHTMQAYPYYSSAYAVKD 202 Query: 119 KNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-- 175 R++ S YP+L + + + + KK+ + ++HL+SF F + Sbjct: 203 HGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLVLYNLHLESFGFTKEEQKLY 262 Query: 176 ------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFN-RKI 215 +SP ++Q + + + ++ P+V I GDFN I Sbjct: 263 FQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQES---PYVLICGDFNDTPI 319 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLI 271 +Y + S + N + K ID+ + + Sbjct: 320 SYTHHR----------LSTGLHDAIATTGRGVNYSYYFKSLIGVRIDHMLYSDHIEARAA 369 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPIS 299 R +SDH PI Sbjct: 370 -------------YVDRTAEISDHKPII 384 >gi|224023659|ref|ZP_03642025.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] gi|224016881|gb|EEF74893.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] Length = 637 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 86/280 (30%), Gaps = 57/280 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 V ++++S+NI +DY + + + AD+V LQE+ S Sbjct: 34 PVENDLKIISYNIRH-----------GEGLDGKTDYVRIARMFREQQADVVALQEVDSVT 82 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + N + + V +L + +P L + Sbjct: 83 G-----RSHKKDVL---REVANEALMYPVFAKAISFDGGSYGVGLLAREHP-LSVERIAL 133 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V LL E + I C SL Q L Sbjct: 134 PGREEARVLLLAEFDDYYI---------GCTHLSL---------TPEDQLASLDVIRKIA 175 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 PF++AGD+N + I + +L+ K+ N + + ID Sbjct: 176 SRLNKPFLLAGDWN-----ALPESQTIQEIRKDFTLLNNLKQATYPAN-----KPEDVID 225 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Y + + K ++Q+ + + SDH P+ Sbjct: 226 YIAVWKATGKSVVQKGGTVLPDTVS---------SDHRPV 256 >gi|123440323|ref|XP_001310923.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121892713|gb|EAX97993.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 339 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 107/305 (35%), Gaps = 36/305 (11%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSY 77 +K++++ +N + + R+ + Y D+V L+E GS Sbjct: 49 TKKLKILDYNAFWRPTMLHMGREEWMRLRSKLLLEKIESY------DVVCLEEGFQFGSD 102 Query: 78 NAVAKVFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 +AK F + + +++ ++ + ++ + I + + Y + Sbjct: 103 --IAKNFIEGAKSLGFKYVLTSKLPPIYTHQVIDSGLI--ILSKFPIIESDTIRYTVFCG 158 Query: 134 KDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 DSF+ G+ A ++++ K + + HL++ + + + +Q L Sbjct: 159 VDSFAAKGSIYA---KIQLDSKNHVHLFSTHLQAS--YQNGQEPTVVDVLVRQKQFDQLS 213 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-----DPNDSLIRFPKEKDSRCNA 247 ++ K P V+ GD N + D+L+ E C Sbjct: 214 AFMATKVTDGYPAVLVGDLNVNSRLGDEYKSLLDHLKIPEYSCVDTLLTTHGEHPVTCGG 273 Query: 248 NKNLRNKIP--------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + P +DY + + K ++ S+ + + +LSDH + Sbjct: 274 DDDKVLPEPGDVGTHQSLDYIYLFEKHDKPQLKVSYKPEVNKMLVNGQKFFQLSDHFAVE 333 Query: 300 IDYDF 304 +++F Sbjct: 334 CEFEF 338 >gi|119114058|ref|XP_319013.3| AGAP009893-PA [Anopheles gambiae str. PEST] gi|116118234|gb|EAA14395.3| AGAP009893-PA [Anopheles gambiae str. PEST] Length = 413 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 18/163 (11%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Y ++ + +N D DI+ LQE+ + + K+ + + + + N+ Sbjct: 129 YQVIEEIVQN-DPDIICLQEVDHFKFLQKILSTQNYEGVFFPKPDS-PCLYINGNNGPDG 186 Query: 114 IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCF 169 AV +K + ++ +L S AV ++ ++ V HLK+ Sbjct: 187 CAVFYKKDRLEMVNHFTRVLEVWRVQSNQVAIAAVLRTLDT-QQEFCVTTTHLKARKGAL 245 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L L N +Q + L +I P ++ GDFN Sbjct: 246 LSKLRN----------EQGKDLLYFIDG-VAENRPVILCGDFN 277 >gi|53715705|ref|YP_101697.1| hypothetical protein BF4425 [Bacteroides fragilis YCH46] gi|60683643|ref|YP_213787.1| hypothetical protein BF4223 [Bacteroides fragilis NCTC 9343] gi|253566481|ref|ZP_04843934.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52218570|dbj|BAD51163.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60495077|emb|CAH09896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251944653|gb|EES85128.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301165155|emb|CBW24725.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 365 Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 88/280 (31%), Gaps = 87/280 (31%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y KN +ADIV +QE I S + + K ++I Sbjct: 125 NYIKNSNADIVCMQEYAGSETAK---------IHLSNKEIRQALKDYPYHNIKQVGKTGA 175 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-------------- 164 + +P+L A+ R+ ++ ++I + +++ HL Sbjct: 176 GSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYE 235 Query: 165 -----------KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF---VIAGD 210 KS + L N + + ++ S QA+ + + + P+ ++ GD Sbjct: 236 DMLKDPKAGKVKSG--VRQLVNKLAEASAIRSAQARTIAQ-----EIAHSPYPSVIVCGD 288 Query: 211 FN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYF 260 FN ++ +D F +S C + + ID Sbjct: 289 FNDSPISYAHRVISQDMDDAF----------------TESGCGLGISYNQNKFYFRIDNI 332 Query: 261 VMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ +N A + S + SDH PI Sbjct: 333 LVSKNLKASGCTVDNSIKD---------------SDHYPI 357 >gi|294667686|ref|ZP_06732898.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602526|gb|EFF45965.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1193 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 72/231 (31%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGK-----KIWVLDIHLK 165 RV S G +++ +R + L ++ + + +H + Sbjct: 695 GGVPRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|294627209|ref|ZP_06705796.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598448|gb|EFF42598.1| nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 1193 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 72/231 (31%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPMPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENLSVLQTLAARVNADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTADIA 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGK-----KIWVLDIHLK 165 RV S G +++ +R + L ++ + + +H + Sbjct: 695 GGVPRVEVLSIAQEGKTATWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA++L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQLNPDEKVLVMGDFN 803 >gi|194306040|dbj|BAG55474.1| hypothetical protein [uncultured bacterium] Length = 329 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 71/241 (29%), Gaps = 47/241 (19%) Query: 65 DADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +D++ LQE+ N +A+V + Y ++ R+ N I + + Sbjct: 120 QSDVILLQEVDEHGTNRMARVLG---YNFVYFP-ASVHRHGRNFGNAILSRWPILNPTKF 175 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 +L + P R A + + ++ +H E + S Sbjct: 176 ILPRRAP--------GTRQLRLATRAEIALGSTRLLAYSVH---------TEVYHLTSRK 218 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNR-KINYLGNNDDFWKTIDPNDSLIRFPKEK 241 QQ + + + + P ++ GDFN + ++ + + +I + R + Sbjct: 219 HRRQQVEAI---VEDIQPGRQPVIVGGDFNTVRRAHIKRLEQQFGSIG----MARVTRGI 271 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 K D+ + SDH P+ + Sbjct: 272 GP--TIRKYRVQPSAADHIFARGI--------EVEARGKIPQVLS------SDHFPVWVR 315 Query: 302 Y 302 Sbjct: 316 L 316 >gi|293339924|ref|XP_002724703.1| PREDICTED: rCG35247-like isoform 2 [Rattus norvegicus] gi|293351343|ref|XP_001057412.2| PREDICTED: rCG35247-like isoform 1 [Rattus norvegicus] Length = 340 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 53/296 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV +L Y DI +QE+ + Sbjct: 81 ATALRIGAFNVQSFGDHKASDPDCGSVI-----AQILAGY------DIALVQEVRDPDLS 129 Query: 79 AVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 AV+ + K+ + S RD +++ RK V V+ Y Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSK-----PLGRDQYKEMYL-FVYRKDVVSVVST-YQYPD 182 Query: 133 AKDSFSRAGNRRAVELLVEING---KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +D+FS R + G K++ ++ +H + + + Sbjct: 183 PEDAFS----REPFVVKFSAPGCAAKELVLIPLH-----AAPNQAVAEIDALYDVY--LD 231 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + W + + GDFN Y+ +D + + + N Sbjct: 232 VIDKW------NTDDMLFLGDFNADCKYVKAHDWPSIRLRSSQVFKWLIPDSADTTVGNS 285 Query: 250 NLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + D V+ K + +S S + E+ + + L SDH P+ + + Sbjct: 286 DCAY----DRIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQALAISDHFPVEVTF 337 >gi|294670922|ref|ZP_06735778.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307409|gb|EFE48652.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 261 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 90/299 (30%), Gaps = 73/299 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + R DI+ LQE Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHR----------------PDILALQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ S + +A+ + + + P L Sbjct: 35 LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRGEPQDVHTGLPTLPDD------PQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V + +++++ + LDS + Y Q L +++ + Sbjct: 89 RRVIAATV----NGVRIVNVYCVNGEALDSPKFQYKE------QWFAALTEFLRNELSRH 138 Query: 203 VPFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ GDFN + + + W + L ++ Sbjct: 139 EKLILLGDFNIAPADADCYAPEKWHEKILCSSIERQWFQNLLDLGLTDSLRQIHPEGAFY 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID+ + + L ++ Y+ + +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKQGLRIDHILTSRTMASALQD---MQVDYDTRAL----ERPSDHAPV 250 >gi|260549985|ref|ZP_05824200.1| nuclease [Acinetobacter sp. RUH2624] gi|260406977|gb|EEX00455.1| nuclease [Acinetobacter sp. RUH2624] Length = 812 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 101/331 (30%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNL---DADIVFLQEMGS 76 A +R+ S+N+ + T +++ R+ L DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHRKIVSALKAIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R + I AI K V+ L + Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGGDVIAVAIIYNSKRVKPLNKPV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C +T + C Sbjct: 574 ---VLDLGDKNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCTGVDANSTDADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D + Y ++ + + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGAGN---LDHAIADADLYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|323705197|ref|ZP_08116773.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535623|gb|EGB25398.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] Length = 231 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 96/285 (33%), Gaps = 66/285 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++++NI G + N + + + DIV LQE+ V Sbjct: 3 IKVMTYNI-----HGGKDIEGNLT------LYGISNLIREIGVDIVGLQEVD-------V 44 Query: 84 FPKNTW---CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK--DSFS 138 F K ++ I Y +RL H ++ + YP++ K +S Sbjct: 45 FLKRSYFLNEIKYLAKRLKMH--YAFGPNLRIGFG---SFGNGILSRYPIVKKKNHHIYS 99 Query: 139 RAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R + L+++N KKIW L HL N L Q + L Sbjct: 100 KGERRGVLTALIQLNENKKIWFLTTHL--------GLNRKER----LVQSQEIL----KI 143 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P ++ GDFN ++ + TI L ++S + + + I Sbjct: 144 VSNLEYPVIMTGDFN-----ETPGEEAYSTIIRV--LKDAVNTQNSAFHTYVDGCENVRI 196 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 DY + + + IK+ LSDH P+ Sbjct: 197 DYIMHSKGMR--------------VESIKAIDSTLSDHLPVVASL 227 >gi|114046513|ref|YP_737063.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] gi|113887955|gb|ABI42006.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-7] Length = 377 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 45/242 (18%) Query: 15 PCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIV 69 +A+ Q +++ + N+ E + + + + Q+ L DIV Sbjct: 9 SSSANTTQSNIKIATVNLFNFIEPPS-AFYDFENIYSHGQWQKKCQWFSELLDQHHPDIV 67 Query: 70 FLQEMGSYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRV 123 QE+ S + ++ + + S + ++ + + + V V Sbjct: 68 GFQEVFSPEPLRQLALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEV 127 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLD 171 + L ++ SFSR R V + +H KS L+ Sbjct: 128 HLVAAMGLSSEFSFSRKVLRATVAV---PQIGPCDCYVVHFKSKRPGLALEPHPMGLSLN 184 Query: 172 SLENTYSPSCSLLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 + + + + L + Q L W + +++ + P ++ GDFN Sbjct: 185 APSDLKLHAETKLLTE-QALGRWASTMQRGAEAALLFHAILARRQSAKHPVILMGDFNDS 243 Query: 215 IN 216 ++ Sbjct: 244 LS 245 >gi|167762675|ref|ZP_02434802.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] gi|167699015|gb|EDS15594.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] Length = 370 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 32/177 (18%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + +Y + D++ QE F +N S R ++H + Sbjct: 134 KQIAKYMQQQHVDVLCFQE----------FGENKHFTADSLRRALSHWQYAIIPADD--- 180 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS-- 172 ++R + YPL+G + ++ + +N I +L+ HL++ + Sbjct: 181 SIRGILPIAVFSRYPLIGGRFITYPHSANCSMLCDIILNTDTIRLLNNHLQTTSVSQNRK 240 Query: 173 ------LENTYSPSCSLLSQQAQWLKDWITQKK-----------ESLVPFVIAGDFN 212 + + A+ L + ++ S P ++ GDFN Sbjct: 241 KWERELAADNTRREAQAVQDAAETLHENFVKRAFQTDSICQLATASPHPVLVCGDFN 297 >gi|167569725|ref|ZP_02362599.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia oklahomensis C6786] Length = 286 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 97/318 (30%), Gaps = 72/318 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RL+SWNI + +G T D A+ L D D++ +QE+ Sbjct: 1 MRLISWNIQWGRDADG-----------TVDLARTIDAARRLVDFDVLCMQEVTRGFRALP 49 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSY 128 Y +A + P + +F + + + + A+A R RV++ + Sbjct: 50 GGPSDDQYAELAALLPG--YSVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERVMRHAL 107 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P + + + + R A+E+ + + V+ HL+ + + L ++A Sbjct: 108 PWPAS--AAAPSMPRCALEVTLRAPLGALRVVVTHLEY--YSAEQRLAQVDALRRLHREA 163 Query: 189 QWLKDWITQKKESLVPF---------VIAGDFN--------RKINYLGN------NDDFW 225 + PF ++ GDFN R+ + Sbjct: 164 AAHTRASAPPETPTGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLA 223 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + + + D + + I + Sbjct: 224 RHPGETPPMTAGVYDTEQWKEGPLTCDFAFVTDTLI--GRLSRCEIDGAVRA-------- 273 Query: 286 KSRGKRLSDHCPISIDYD 303 SDH PI+++ Sbjct: 274 -------SDHQPIALELS 284 >gi|332671352|ref|YP_004454360.1| endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] gi|332340390|gb|AEE46973.1| Endonuclease/exonuclease/phosphatase [Cellulomonas fimi ATCC 484] Length = 668 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 22/153 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP A+ + +V WN++ T D + + + D D+V LQE Sbjct: 427 VPAAAADDGTLTVVDWNLHY-----------GVSPLTAVDLEAVARTIEEQDPDVVTLQE 475 Query: 74 MGSYNAVAK--VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + + VF + + RL + D AV ++ +PL Sbjct: 476 V------QRGWVFGGGSDMATWLAHRLGMTVRFAPAADRQFGNAVLARSGLTDVAVHPLP 529 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + R+ L +G + V +HL Sbjct: 530 YGQGPQERSAL---SATLTTADGGTVRVTSVHL 559 >gi|265767350|ref|ZP_06095016.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252655|gb|EEZ24167.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 87/280 (31%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y KN +ADIV +QE I S + + K +++I Sbjct: 125 NYIKNSNADIVCMQEYAGSETAK---------IHLSNKEIRQALKDYPHHNIKQVGKTGA 175 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-------------- 164 + +P+L A+ R+ ++ ++I + +++ HL Sbjct: 176 GSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLINNHLESNKLTREDKVVYE 235 Query: 165 -----------KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF---VIAGD 210 KS + L N + + ++ S QA+ + + + P+ ++ GD Sbjct: 236 DMLKDPKAGKVKSG--VRQLVNKLAEASAIRSAQARTIAQ-----EIAHSPYPSVIVCGD 288 Query: 211 FN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL---RNKIPIDYF 260 FN ++ +D F +S C + + ID Sbjct: 289 FNDSPISYAHRVISQDMDDAF----------------TESGCGLGISYNQNKFYFRIDNI 332 Query: 261 VMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ +N A + S + SDH PI Sbjct: 333 LVSKNLKASGCTVDNSIKD---------------SDHYPI 357 >gi|260220884|emb|CBA28896.1| hypothetical protein Csp_A09430 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 257 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 89/314 (28%), Gaps = 94/314 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE---MGSYNA 79 ++L +WNIN+L R L + D++ LQE Sbjct: 1 MKLATWNINSLG------------VRLPQVLDWLAA-----NPVDVLALQELKLTDDK-- 41 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 FP + + I + + + +A L P + Sbjct: 42 ----FPADAFE-------AIGYHAQWFGQKTYNGVA--------LLSRTPASDVIKNIPG 82 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WIT 196 + + + ++G ++ N P + +WL W+ Sbjct: 83 FDDDMSRVITGTVDGVRV-----------IGAYFPNGQEPGSDKFEYKMEWLSALRRWVK 131 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK--------DSRCNAN 248 + + V+ GD+N + DD W ++ ++ +E+ C++ Sbjct: 132 DELATHPNLVLMGDYN----ITFDEDDVWDPVNLEGTIHCTEEERYHLRALIALGLCDSY 187 Query: 249 KNLRNKIP-------------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + ID+ ++ + + D + Sbjct: 188 RLFPYPPKSFSWWDYRDAGFRRNRGLRIDHILVSNALKPQVTACTI-------DKTPRKN 240 Query: 290 KRLSDHCPISIDYD 303 +R SDH P+ +D Sbjct: 241 ERPSDHAPVVVDIS 254 >gi|113969876|ref|YP_733669.1| PKD domain-containing protein [Shewanella sp. MR-4] gi|113884560|gb|ABI38612.1| PKD domain containing protein [Shewanella sp. MR-4] Length = 948 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 107/335 (31%), Gaps = 52/335 (15%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDADI 68 + +++ S+N +N + G + T S++ + + + AD+ Sbjct: 451 SPELAEGGNLKVASFNVLNYFNGDGQGGGFPTSRGANTLSEFERQKAKIVSAMVGISADV 510 Query: 69 VFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L E+ + + +N + N S ++ I + Sbjct: 511 FGLMEIENDGFGANSAIADLVAGLNAAVGENRYAYVIPKVNGSNLSAIGTD-AITVGLIY 569 Query: 117 R------KKNVRVLQQSYPLLG--AKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKS 166 R + + R+L + L + F + NR + +NG + + V HLKS Sbjct: 570 RSDKVSPQGDARILSSANSPLDDAGQPQFDDSKNRPMLTQAFALNGSEESVVVAVNHLKS 629 Query: 167 F---CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----KINY 217 C D N +C+ ++ A WI + ++ GD N ++ Sbjct: 630 KGSECAGDPDMNDGQGNCNITRTRAATAAGQWIAAQYPE-QGVLLIGDLNSYAKEDPLSA 688 Query: 218 LGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--------YFVMDQNAY 267 L N + + ++ + + + L N +D + D+ Sbjct: 689 LANAGFSELFAKLEKANPYSYVFSGESG--QLDHALANAALVDKVLDVTEWHINTDEP-R 745 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E F +D S R SDH P+ I Sbjct: 746 VLDYNEEFKTAAQVQDLYASDAYRSSDHDPVVISL 780 >gi|145589433|ref|YP_001156030.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047839|gb|ABP34466.1| Exodeoxyribonuclease III [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 282 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 96/312 (30%), Gaps = 64/312 (20%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R+ +WN+N+L + V R D Q D + LQE+ Sbjct: 2 TDSIRIAAWNVNSL------KVRLPHVIRWLKDQEQANQPI-----DALCLQELK----- 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFS 138 + + + + + + +A VRK + + K + + Sbjct: 46 ---LTDDKYP--HQELEDEGYVSLAAGQKTYNGVAIIVRKAALAPIASDESTTFLKQARN 100 Query: 139 RAG----NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 G +R + + G + I ++ + + DS + Y + Q+ L+D Sbjct: 101 IPGFEDEQQRILAATIPFAGMQPIRLISAYFPNGQSPDSDKFAYKLN----WMQS--LED 154 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRF---PKEKDSRC---- 245 W+ Q+ +S + GDFN +D W+ + R K C Sbjct: 155 WLVQELQSNTRLALLGDFNIAPADADVHDPKAWEGQNLVSPPERAAFESLIKLGLCDSFR 214 Query: 246 ------NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ ID+ ++ + D + + Sbjct: 215 IFEQTPKTYSWWDYRMMGFRRNAGMRIDHILLSDPLKEKCSAS-------FVDKLPRSWE 267 Query: 291 RLSDHCPISIDY 302 + SDH P+ + Sbjct: 268 QPSDHAPVVAEI 279 >gi|300705174|ref|YP_003746777.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] gi|299072838|emb|CBJ44194.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] Length = 248 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 24/156 (15%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F + + Y + H+ + + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPSYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F S + Sbjct: 93 MSRYPILLSEN---LDISDH--RFEQRGLLHAVTDLGFGEVHLLCAHF--GLFARSRQ-- 143 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +QA+ L + + + P V+AGDFN Sbjct: 144 ---------RQAEALIERVRSVVPTDAPLVVAGDFN 170 >gi|329937752|ref|ZP_08287271.1| secreted protein [Streptomyces griseoaurantiacus M045] gi|329303151|gb|EGG47039.1| secreted protein [Streptomyces griseoaurantiacus M045] Length = 285 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 58/274 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MG 75 A R+++WN+ N K +D L +V LQE + Sbjct: 43 AVPNRVMTWNL------------CNPCKSGDAD---LAAEIAASAPQVVGLQESCTGQVE 87 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH---TAIAV--RKKNVRVLQQSYPL 130 + + + + Y T +++ R A+ + YP Sbjct: 88 RIRTLLRNRHGLDYHVEYGT--VLHRWGRCGGAPWKPGGYGEAILSAAPMTDAVAVEYPD 145 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G++D R + + + G+++ V + HL S ++Q Sbjct: 146 GGSED-------RGYMAVTTTVGGRELRVFNTHL---------AERRQESVR--AKQVDV 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + + + V+ GDFN + Y D W + D R C + Sbjct: 188 LAKVVARYDRA----VVMGDFN-AVPYAAELDAMWPLVKDADP--RCGPSAGGACEPTTD 240 Query: 251 LRNKIPIDYFVMDQ----NAYKFLIQESFSEILY 280 ++ DY + S +LY Sbjct: 241 WHSRF--DYVFLRGVGASGHRVRASTHSDHHMLY 272 >gi|15599153|ref|NP_252647.1| hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1] gi|107103475|ref|ZP_01367393.1| hypothetical protein PaerPA_01004545 [Pseudomonas aeruginosa PACS2] gi|218889759|ref|YP_002438623.1| putative nuclease or phosphatase [Pseudomonas aeruginosa LESB58] gi|9950146|gb|AAG07345.1|AE004813_12 hypothetical protein PA3958 [Pseudomonas aeruginosa PAO1] gi|218769982|emb|CAW25744.1| possible nuclease or phosphatase [Pseudomonas aeruginosa LESB58] Length = 379 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 96/320 (30%), Gaps = 60/320 (18%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLIN-------------------HSKRDSNNDIH 111 LQE+ ++ + + ER+ + H Sbjct: 130 LQEIDDGSSA----TDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQA 185 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 T R + ++ P G R A+ + G ++ VL+ F Sbjct: 186 T--LSRYRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLNAR-----F 238 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------RKINYL 218 N L +Q + + + + + P+++ GD N + Sbjct: 239 DRPQANDD-----TLERQVETTRTLLDELQARRTPWLLGGDLNLLPPGQYPYLLAPLRAP 293 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + ++ +E D V + + S S Sbjct: 294 YREDSELAILSGRFPMVPSLEEASGVDQVRWYTHFPN--DPRVQGPDRTLDYLFHSPSLT 351 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 + +S ++S+H P+ Sbjct: 352 RLDARVRRSDTLQISNHLPL 371 >gi|302336142|ref|YP_003801349.1| Endonuclease/exonuclease/phosphatase [Olsenella uli DSM 7084] gi|301319982|gb|ADK68469.1| Endonuclease/exonuclease/phosphatase [Olsenella uli DSM 7084] Length = 427 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 86/297 (28%), Gaps = 75/297 (25%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLI 99 T D +R A + D + QE + A+A FP +F S Sbjct: 162 TAGDIATMRAAAGGMAPDFMLFQEVDVDSDRSYHVDQRTALADAFP-TYQSVFAS----- 215 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR--RAVELLVEI----- 152 + H + S LL D + R V+ Sbjct: 216 ---------NFHAGFLAWPPTSPHGRVSSGLLTLADVDVTSALRRSYPVDESFPTKFFDL 266 Query: 153 ------------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +G+++ +++ HL + D ++Q L ++ ++ Sbjct: 267 DRCFEVLRVPVSDGRELVLINSHLSA---YDEGGTVR-------ARQLSMLGAALSAERA 316 Query: 201 SLVPFVIAGDFNRKI--------NYLGNNDDFWKTIDPNDS-----LIRFPKEKDSRCNA 247 + + GD+N + + D D + + E+ + C Sbjct: 317 AGNYVIAGGDWNHALCGSLELYPSQQQVPDWVATLDDEDLPEGFSVVRAGNLEEVASCRG 376 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +D F++ ++ S N D G SDH P+ + + Sbjct: 377 DDIPYERDVTYTVTVDG----FVVSDNVSATATNIDT----GFATSDHNPVLLSFAL 425 >gi|254516326|ref|ZP_05128385.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium NOR5-3] gi|219674749|gb|EED31116.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium NOR5-3] Length = 312 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 91/271 (33%), Gaps = 25/271 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ NI ++ S RT + + ++ ++V LQE + + Sbjct: 37 TIKVMTLNIAH-GRNSALNQLFVSKARTFENLDYIAALLADIAPNVVALQEADGRSRWSG 95 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F T+ S + H + + A+ + + S + S + Sbjct: 96 NFDHVTYIAEKSGLPCVVHGLHSRSWISNYGTALLSRGKPIASSSVSFSPSWPSKQKGFV 155 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ V+ + ++ +H D L +Q + + Q + Sbjct: 156 TTTIDWPVDQQRIPVTLVSVHF------DFLRKKVRD------RQVSEM---VAQLVDID 200 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P V+ GD N + ++ +++ L F EK+ K + +D+ ++ Sbjct: 201 GPLVLMGDLNSHWSQKSSH---VRSLVDELDLQAFSPEKNGLGTYKKTTGKR--LDWILI 255 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + L E++ + D + +S Sbjct: 256 S----QELAFEAYEVLPDIVADHLAVVAEIS 282 >gi|71280189|ref|YP_268051.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71145929|gb|AAZ26402.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 410 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 35/231 (15%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFLQ 72 + ++++ ++N+ E + + +Y DI+ Q Sbjct: 34 SVSVANTQLKVATFNLFNYLEPPNAYYEFERIYSAEQWAKKQKWVAEYLSEFQPDIIGFQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------- 125 E+ S +++ ++ + F ++ AIA R V Sbjct: 94 EVFSADSLKELVAAQGYAYFAVVDQ-PTVIDDFIYRSPVVAIASRYPITEVAAVKANTEL 152 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF---CFLDSLENTYSPSCS 182 L SFSR R VEL + K +H KS +D +N +SP + Sbjct: 153 AQTLGLANDFSFSRKVIRATVEL---PHMGKCDCYVVHFKSKRSMIEIDEKKNHWSPEKT 209 Query: 183 LL-SQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKI 215 ++ S +A W I +++ + P V+ GDFN + Sbjct: 210 IIESLKANVAGGWGSTIQRGSEATLLMIDMIERREATGNPMVLMGDFNNTL 260 >gi|323126982|gb|ADX24279.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 941 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 90/324 (27%), Gaps = 61/324 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 563 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 616 Query: 77 -------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +A+ K+ T+ + N +I T + V + Sbjct: 617 DGTTDATQSAQRLIDAIQKL-GGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVSL 674 Query: 124 LQQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKS 166 + +G D + A R+++ G K+ V+ HL S Sbjct: 675 SDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLNS 734 Query: 167 FCFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 ++L P + A L + + V+ GDFN Sbjct: 735 KRGDNALYGRVQPV--TFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI 792 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I+ D + + + N +D ++ N + Sbjct: 793 -----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHVNSP 847 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + F Sbjct: 848 FMEV----HGRASDHDPLLLQLSF 867 >gi|251782127|ref|YP_002996429.1| extracellular nuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390756|dbj|BAH81215.1| extracellular nuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 941 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 90/324 (27%), Gaps = 61/324 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 563 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 616 Query: 77 -------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +A+ K+ T+ + N +I T + V + Sbjct: 617 DGTTDATQSAQRLIDAIQKL-GGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVSL 674 Query: 124 LQQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKS 166 + +G D + A R+++ G K+ V+ HL S Sbjct: 675 SDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLNS 734 Query: 167 FCFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 ++L P + A L + + V+ GDFN Sbjct: 735 KRGDNALYGRVQPV--TFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI 792 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I+ D + + + N +D ++ N + Sbjct: 793 -----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVSHNLLGQYEFDMVHVNSP 847 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + F Sbjct: 848 FMEV----HGRASDHDPLLLQLSF 867 >gi|108759762|ref|YP_633331.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] gi|108463642|gb|ABF88827.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] Length = 256 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 98/305 (32%), Gaps = 77/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSYNAV 80 +++ +WN+N++ ++ L + K D++ LQE + + Sbjct: 1 MKIATWNVNSVRARQ----------------ERLLAWLKKAQPDVLCLQELKCVDDDFPM 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V R + + + +A+ K G DS +R Sbjct: 45 EAV-------------RELGYHAAVHGQKTYNGVAILAKEEPKDVVKGLSDGVDDSHAR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 L+ I V+ + + +DS + Y L + L+ ++ + + Sbjct: 91 --------LIAATVGGIRVVSAYAPNGQSVDSPQYQYK-----LEWYGR-LRRYLDTRHK 136 Query: 201 SLVPFVIAGDFNRKINYLGNNDD-FWK-----TIDPNDSLIRF----PKEKDSRCNANKN 250 P V+ GD+N + D W+ T+ D+L R + R + Sbjct: 137 PDEPLVLGGDWNVAPEDIDTYDPKLWEGQTLFTLKERDALQRLGAFGLSDAFRRLHPGVQ 196 Query: 251 LRNKI-------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ + + L + + D + +GK+ SDH P Sbjct: 197 KFTWWDYRMLGFPKNLGLRIDHLYVTAPVAERL-------TVVDVDREERKGKQPSDHAP 249 Query: 298 ISIDY 302 + ++ Sbjct: 250 VWLEL 254 >gi|298481016|ref|ZP_06999211.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|298273039|gb|EFI14605.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 365 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 93/318 (29%), Gaps = 88/318 (27%) Query: 13 LVPCTASVAQKVRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +V + + ++N++ + E G S + + Y +NL ADI+ Sbjct: 99 MVKMNVYTPGVLTVATYNVDAFNHEHTGYSCKE------------IASYMRNLQADILCF 146 Query: 72 QEMG-----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 QE G ++++ + S+ N + + Sbjct: 147 QEFGINDEFGIDSISAALSNWPYHYIPSSPEGKNLLQLAVFS------------------ 188 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLDSLE 174 YP+ ++ +EING+ I + + HL++ D + Sbjct: 189 RYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQTTEVSQNKRKLEKGLRTDDSQ 248 Query: 175 NTYSPSC----------SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGN 220 + + QA LK I S P ++ GDFN + + Sbjct: 249 RVEHAALGLIDGLHENFQKRAVQADLLKQLI---AASPYPTLVCGDFNSLPSSYVYHTIK 305 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 D + + K ++ + IDY L + Y Sbjct: 306 GDKLQDGFQRSGHGYMYT---------FKYFKHLLRIDYI---------LHSPELNSTDY 347 Query: 281 NEDDIKSRGKRLSDHCPI 298 D+ SDH P+ Sbjct: 348 FSPDL-----NYSDHNPV 360 >gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 788 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWITQ------KKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + Q KK + P V+ GD N + TI Sbjct: 658 GKVQPLVLKSEEKRIQLAQEVNQFVQDIQKKNTNAPVVVLGDMN-DFEFAKPLKALEGTI 716 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L PKE + N +D+ ++ N + + + ++ +I Sbjct: 717 LKN-MLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|72390874|ref|XP_845731.1| RNA-editing complex protein MP100 [Trypanosoma brucei TREU927] gi|62175829|gb|AAX69956.1| RNA-editing complex protein MP100 [Trypanosoma brucei] gi|70802267|gb|AAZ12172.1| RNA-editing complex protein MP100 [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 894 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 96/300 (32%), Gaps = 35/300 (11%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 V ++L++WN+ + S + + Y ++ + + DAD+V +QE+ Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVEP 672 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 VF + F S LI S + AIA + + ++ P+ Sbjct: 673 ------VFWE-----FLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721 Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A + +++ + + HL + + S EN + Q L+ Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAP-YTKSHENARTS-------QDTALRH 773 Query: 194 WITQKKESLVPFVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + K V GDFN + + D W + PN+ + ++ C Sbjct: 774 HM-TKTLGGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTMDE-TNTFCKL 831 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 D + + + ++ + SDH +SI + Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFSL 891 >gi|254236851|ref|ZP_04930174.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719] gi|126168782|gb|EAZ54293.1| hypothetical protein PACG_02871 [Pseudomonas aeruginosa C3719] Length = 379 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 73/223 (32%), Gaps = 47/223 (21%) Query: 21 AQKVRLVSWNINTLSEQ-----EGVSLWKNSVKRTTSD-----YTLLRQYAKNLDADIVF 70 Q +++++WNI L+ + + + +R T++ + + ++ D+V Sbjct: 70 GQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQRPTAEDLAFTLDEVVRVIRDEQPDLVL 129 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLIN-------------------HSKRDSNNDIH 111 LQE+ ++ + + ER+ + H Sbjct: 130 LQEIDDGSSA----TDDQDQLALIQERINDLYHCSAQAYEWKSAFVPTPHIFGSVGRKQA 185 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 T R + ++ P G R A+ + G ++ VL+ F Sbjct: 186 T--LSRYRIDSAERRQLPPRDGGLFDRLFGPRPAILVSHLPIDGGGELAVLNAR-----F 238 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 N L +Q + + + + + P+++ GD N Sbjct: 239 DRPQANDD-----TLERQVETTRTLLDELQARRTPWLLGGDLN 276 >gi|213964132|ref|ZP_03392371.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] gi|213953225|gb|EEB64568.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] Length = 253 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 93/288 (32%), Gaps = 63/288 (21%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++ +WN+ K ++T + + L+AD++ L E + ++ +++ Sbjct: 3 KIATWNVE---------RPKKGTQKTALAIVKI----EELNADVLVLTENATSISLTELY 49 Query: 85 PKNTWCIFYSTERLIN----------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 P + + Y + + + ++ TA AV K + G Sbjct: 50 PFSVHSLSYERTPEEHWVSIFSKWQITEQIQTFDNYRTACAVIKS----PFGDITVFGTI 105 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + +AG + + D+H QQA+ DW Sbjct: 106 IPYHQAGVSGIKYGNLGYKQWEYHEKDLH----------------------QQAK---DW 140 Query: 195 ITQKKESLVPFVIAGDFNR-KINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANK 249 K++ P + GDFN+ + N+ G +L + S Sbjct: 141 ERITKKTQNPLWVMGDFNQSRYNHQGYGTEKVRQLLSDYLKKLNLTCVTEGDLSPFLHPD 200 Query: 250 NLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ++NKI ID+ + + + D GK +SDH Sbjct: 201 PIKNKIRNNIDHICISNSFMLKMKAYQVG----AWDHFNEEGKYMSDH 244 >gi|119356848|ref|YP_911492.1| endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides DSM 266] gi|119354197|gb|ABL65068.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeobacteroides DSM 266] Length = 342 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 94/339 (27%), Gaps = 64/339 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDYT--- 55 V+ F A + ++ WN L + + + + T Sbjct: 14 VILFTAFSSSAKAGAGDSLLVMWWNAENLFDSINDPAVDDDDFTPEGKFRWTEKKLQLKL 73 Query: 56 -LLRQYAKNLD--------ADIVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSK 103 ++ ++ DI+ E + AK V + + Y + S Sbjct: 74 MRVQHLFNAINSHPQYSAYPDIIAFAETENKKVFAKAIGVIKSGGYKMVY------HESG 127 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 DI A RK + + + K +R + + ++ H Sbjct: 128 DPRGIDIGLAFNSRKVVFKASKAYQIPVDDK------PSRPVIVAEFSVFSHPFHIVLNH 181 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S F + + + + D + QK +I GDFN + Sbjct: 182 WPSRAFDIRWTEPKRIGAATV---VRHIADSLLQKNS-KADIIIMGDFNDEPENRSLKKV 237 Query: 224 FWKTIDPNDSLIRFPKEKD-SRCNANK-------NLRNKIPIDYFVMDQNAYK----FLI 271 + D S ++ + + C A+ + ID ++ + +L Sbjct: 238 LGSSFDA--SAVQASRGRLFYNCWADCRGIGSYFYRGHWEKIDQILVSGGLFDRKGLWLP 295 Query: 272 QESFSEILYN------------EDDIKSRGKRLSDHCPI 298 + +F ++ + SDH P+ Sbjct: 296 ENAFHCFAFSGMMDEGGKKLWPTYEKGVYKGGYSDHLPL 334 >gi|315023440|gb|EFT36448.1| AP endonuclease domain protein [Riemerella anatipestifer RA-YM] Length = 325 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 93/271 (34%), Gaps = 68/271 (25%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + ++ DI+ +QE G + E +++ + Sbjct: 106 EAGIANIDHHLESFSPDIILIQEKGD----------------FKEEIESMPYRKEIDILE 149 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK----- 165 P++ + A N A + EI GK+I ++++LK Sbjct: 150 F-------------YSKTPIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFELN 196 Query: 166 ------SFCFLDSLENTYSPSCSLL------SQQAQWLKDWITQKKESLVPFVIAGDFNR 213 S S E S L Q + ++ + ++S P ++ GDFN Sbjct: 197 KDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAV---EKSPYPVILGGDFN- 252 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + ++ + + DS + K + + + + I IDY + K + Sbjct: 253 --AVPNSYEYYYLSQNMTDSFLEVGKGLGTTFH---DYKFPIRIDYLF----STKEIKPV 303 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 S R ++LSDHCPI ++ + Sbjct: 304 SLDT---------DRSRQLSDHCPIIGEFKY 325 >gi|313206564|ref|YP_004045741.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312445880|gb|ADQ82235.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|325335988|gb|ADZ12262.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-GD] Length = 326 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 93/271 (34%), Gaps = 68/271 (25%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + + + ++ DI+ +QE G + E +++ + Sbjct: 107 EAGIANIDHHLESFSPDIILIQEKGD----------------FKEEIESMPYRKEIDILE 150 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK----- 165 P++ + A N A + EI GK+I ++++LK Sbjct: 151 F-------------YSKTPIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFELN 197 Query: 166 ------SFCFLDSLENTYSPSCSLL------SQQAQWLKDWITQKKESLVPFVIAGDFNR 213 S S E S L Q + ++ + ++S P ++ GDFN Sbjct: 198 KDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAV---EKSPYPVILGGDFN- 253 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 + + ++ + + DS + K + + + + I IDY + K + Sbjct: 254 --AVPNSYEYYYLSQNMTDSFLEVGKGLGTTFH---DYKFPIRIDYLF----STKEIKPV 304 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 S R ++LSDHCPI ++ + Sbjct: 305 SLDT---------DRSRQLSDHCPIIGEFKY 326 >gi|311113023|ref|YP_003984245.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] gi|310944517|gb|ADP40811.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] Length = 282 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 96/320 (30%), Gaps = 70/320 (21%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-LRQYAKNLDADIVFLQEMG 75 + A+ +R+ S N+N + + Y + + D DI+ LQE+ Sbjct: 1 MSRAAKTLRVASVNVNGIR----------------AAYRKDMATWLAGRDVDILCLQEVR 44 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA- 133 + + + + + ++ W I ++ + H + Q Sbjct: 45 APDKIVRELLNEDDWNILHAEAAAKGRAGVLVATRKHP----NANGELLKNQPVATRSTI 100 Query: 134 -KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +D F+ AG + + G+ + V+ ++ S ++ L + L Sbjct: 101 GEDYFADAGRWVEADYTLPT-GETLTVVSAYVHSGEVGTPRQDDKY---RFLDRMLVRL- 155 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD-------------------FWKTIDPNDS 233 + + +I GD N L + F+ I D Sbjct: 156 ---PELAQHSDHVLIVGDLNVGHTELDIKNWKANQKRAGFLPEERAYFDKFFGEIGYEDV 212 Query: 234 LIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + E + IDY A L ++ + D Sbjct: 213 ARKLAGEVPG---PYTWWSYRGKAFDNDAGWRIDY----HMATPALAAKAVEATV---DR 262 Query: 285 IKSRGKRLSDHCPISIDYDF 304 S +R SDH P+ +DY F Sbjct: 263 AASYDERFSDHAPLVVDYQF 282 >gi|253702348|ref|YP_003023537.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251777198|gb|ACT19779.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 249 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 62/294 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++N++ L + +S R + + ADIV LQE+ A Sbjct: 6 RSFTIMTYNVHRLIGND----RHSSAPR-------IAEVIHTYQADIVCLQEL--PGARV 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----GAKDSF 137 + L+ R + R++ +V+ +P+ G Sbjct: 53 RPEVGGACQNLMHELALLESGGRHFFLE-------RERWGKVVLSRFPMRLVQAGGLHPQ 105 Query: 138 SRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-- 192 +R R + + +++ G+K+ V+++HL Q + L Sbjct: 106 NRYRTVVPRGVLWVEIDLFGQKLQVVNVHL--GLTPQERNY-----------QVRVLTGP 152 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +W++ + P + GDFN + + + ++F + + +K Sbjct: 153 EWLS-HPDCRPPVALCGDFN-TLPSSTIHKQLKNALMDEQEKLKFGHNQFT--FPSKLPM 208 Query: 253 NKIPIDYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D+ + + LI + SDH P+ + Sbjct: 209 VRF--DHIFVSPDLVVENELIPRT------------KLTGAASDHLPLVVRLRL 248 >gi|108761532|ref|YP_629832.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108465412|gb|ABF90597.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 596 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 75/242 (30%), Gaps = 39/242 (16%) Query: 59 QYAKNLDADIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + DAD+V +QE S + F H R+ I I Sbjct: 100 RIFQGTDADVVMIQEFNYKSNSAADIRGFVDTTFGTQF--------HYYREGGAQIPNGI 151 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 R + + P + +D A + K +W + +H FL + Sbjct: 152 ISRYPIIASGEWDDPYVSNRD--------FAWARIDVPGPKDLWAVSVH-----FLTTGS 198 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + +A L I + VI GD +N N+ + T+ Sbjct: 199 SNRNS-------EASNLVSRIKANIPAGDYLVIGGD----LNTGSRNESAFSTLSQVVR- 246 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED-DIKSRGKR-L 292 P D N N N P D+ ++D + + + + + +R L Sbjct: 247 TAGPHPADKNGNTNTNAGRNAPYDHVLVDSDLFAYQTPVVIGGSTFTNGLVVDTRVYSPL 306 Query: 293 SD 294 SD Sbjct: 307 SD 308 >gi|297197975|ref|ZP_06915372.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197715024|gb|EDY59058.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 279 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 77/281 (27%), Gaps = 65/281 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 R+++WN+ + R ++ LQE +G + Sbjct: 46 PNRVMTWNLCN-------PCKTGNDDR--------AAEIATFAPQVIGLQEACVGDVEKI 90 Query: 81 AKVFPKNTWCIFYSTERLI----NHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAK 134 +++ + N A+ V+ + YP G++ Sbjct: 91 RDYLENLHGLVYHVEYGAVLQSWGRCGGAPWNPGGYGEAILSAAPMTDVVTEEYPDGGSE 150 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 D R +E+ + G+ + V + HL + + Q L Sbjct: 151 D-------RGYMEVTTTVGGRPVRVFNTHL---------AERRQEAVR--ADQVGVLAKE 192 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + + ++ GDFN + W+ D R + C + + Sbjct: 193 VARHDRA----IVIGDFN-AVPDAYELTKMWRLATDADPHCRP--GAATTCEPTTDWQ-- 243 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 DY + Y + ++SDH Sbjct: 244 SKFDYVFLRG---------------YVPARHRVHPNQVSDH 269 >gi|327191270|gb|EGE58313.1| putative phosphatase protein [Rhizobium etli CNPAF512] Length = 659 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 46/189 (24%) Query: 57 LRQYAKNLD-ADIVFLQEM---------GSYNA-VAKVFPKNTWCIF-----YSTERLIN 100 L + A++L+ AD++ LQE+ A +A +FP + + ++ E Sbjct: 391 LPRIARSLEGADVIALQEVTRGFSRNGFADMAADIAALFP-DYFWVYGPACDLHVEAPEG 449 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 V + ++ L ++ R A E ++ G I V Sbjct: 450 VLSPVRGIRFQFGNMVLSRWPIASTRTLLLPRSRTLGKINPQRGATEAVINAPGGAIRVY 509 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-----------------V 203 +HL + SP + +Q Q+L I Sbjct: 510 SVHL----------DHVSPDERI--RQLQFLNAQINAFVREGGSLTGAAEFDLPEPPLPE 557 Query: 204 PFVIAGDFN 212 +VI GDFN Sbjct: 558 DYVILGDFN 566 >gi|261362093|gb|ACX71479.1| sphingomyelinase [Bacillus mycoides] Length = 239 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 25/204 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNASNR 89 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + + D AI + + +Q + Sbjct: 90 LLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKIQYVFEKG 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q + Sbjct: 150 CGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQEI 202 Query: 192 KDWITQKKESLVPFV-IAGDFNRK 214 +++I K +V I GD N Sbjct: 203 QEFIKNKNIPNNEYVLIGGDMNVN 226 >gi|83311632|ref|YP_421896.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82946473|dbj|BAE51337.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 440 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 91/312 (29%), Gaps = 82/312 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ +WN+N + R + L +A D+V LQE+ Sbjct: 182 SMGLRIATWNVN------------SVRARLGNVLDWLGSFA----PDVVLLQEIKCQ--- 222 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + +A+ ++ ++ D +R Sbjct: 223 -------DQDFPLLEIQAAGYHAAVHGQKSYNGVAILSRHPMSDVRTRLSGDDSDEQAR- 274 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKK 199 + I G + ++L + + Y + + L AQ L Sbjct: 275 ------YIEATIGGW--RLASLYLPNGNPAPGDKFDYKLAWMARLRTHAQAL-------L 319 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR--------------C 245 +PFV+ GDFN +DD + D + P + + Sbjct: 320 AQGIPFVLGGDFN----ICPTDDDVYDPPKWRDDALCRPDSRAAWRSIVNLGLTEAFRAL 375 Query: 246 NANKNLRNKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + R ID+F++ A L D ++ Sbjct: 376 HPGEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPQAADCLHACEI-------DKAPRGKEK 428 Query: 292 LSDHCPISIDYD 303 SDH P+ I+ + Sbjct: 429 ASDHTPVWIELE 440 >gi|317969204|ref|ZP_07970594.1| exodeoxyribonuclease III [Synechococcus sp. CB0205] Length = 273 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 92/310 (29%), Gaps = 82/310 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N + R L+ + + D++ LQE + Sbjct: 1 MRIASWNVN------------SVRTRLDQVLAWLQTH----EPDVLCLQETKVSDDLFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + S ++ N R+ D+ P G Sbjct: 45 QAFEQIGYHCAISGQKAYNGVALISREPLEDVQVGF----------DALLPDAGPLSEQK 94 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP---SCSLLSQQAQWLKDWI 195 R ++ + +L++++ + L S + Y +C L+ ++ Sbjct: 95 R---------VISGMLDGVRILNLYVPNGSSLKSEKYHYKLEWLAC---------LQRYL 136 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEKDS---------- 243 ++E P + GDFN + D TI +D + + Sbjct: 137 AVQEEQGDPLCMVGDFNIGLEDRDLPDPQRLSGTIMASDPERSALRAALADRLTDVFRVF 196 Query: 244 --RCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ID+ + + + L + I D + Sbjct: 197 EPGSGHWSWWDYRSGAWDRDLGWRIDHIYLSE---ELLGCATGCVI----DKQPRGNVQP 249 Query: 293 SDHCPISIDY 302 SDH P+ ++ Sbjct: 250 SDHAPVVVNL 259 >gi|149175039|ref|ZP_01853662.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] gi|148846017|gb|EDL60357.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] Length = 321 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 97/306 (31%), Gaps = 63/306 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 + ++ + +R+++ NI +E + + LLR+ L D++ QE Sbjct: 32 SSETLDRPLRVLTANIWNYAEPYELRMK------------LLREQITALQPDLIGFQEAG 79 Query: 75 ---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + V ++ + I + ++ N +R + A+A R R S P Sbjct: 80 WKPEEEHQVKQLLQGLNYHIEHESDGSDNKERRLLD----VAVASRWPLKRKAFHSLP-- 133 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 +G AVE+ ++ + + D + L Sbjct: 134 -------GSGKALAVEITAPQPIGRLLFVSTFGTARWQFDRELQRERDA--------VAL 178 Query: 192 KDWITQKKE-SLVPFVIAGDFN--------RKINYLGNND-------DFWKTIDPNDSLI 235 +I + + + P +IAGDF+ R + L + D D WK + Sbjct: 179 DRFIREISDPNGFPPIIAGDFDATPDSAGIRYLTGLQSLDGHSTHYYDAWKAAGNRGAGP 238 Query: 236 RFP------KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + K+ + + + IDY + + S + + Sbjct: 239 TWTTQNHYAKKTTEQFWHLSDHHRR--IDYIFLGSPHHFRGYARVVSTRVVLNQPVGKDW 296 Query: 290 KRLSDH 295 SDH Sbjct: 297 P--SDH 300 >gi|37993840|gb|AAR07002.1| sphingomyelinase [Bacillus thuringiensis] Length = 252 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 76/209 (36%), Gaps = 21/209 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK 214 Q + ++D+I K +V+ GD N Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVN 226 >gi|260460592|ref|ZP_05808843.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259033697|gb|EEW34957.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 92/321 (28%), Gaps = 63/321 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LVS+NI S R D + + ADI+ LQE+ Sbjct: 1 MKLVSYNIQY---------GFGSDGR--YDLSRAARIVA--GADIIALQEVERHWQRSNF 47 Query: 75 -GSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 ++++ P W + + R N V K + L Sbjct: 48 DDQPELLSRLLPDYHWVYGPAFDMDASERRDGRLVNRRRQFGTMVLSKLP-IAWSRLHAL 106 Query: 132 GAKDSFSRAGNR-RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + R A+E ++ + VL +HL + LE LL+Q + Sbjct: 107 PMRRTLRPLNTRNAALECMIRTPAGPLRVLSLHLAHIAAEERLEQID----YLLAQHRRA 162 Query: 191 LKD--------------WI--TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWK 226 + W + E+ + + GDFN R+I Sbjct: 163 PSEGGPWSGADDEPSRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAA 222 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN---ED 283 +D E + + ID + F ++ Sbjct: 223 YLDGFVDAAAVASEPVLDFHTRDFHTHVKTID-----GKLTNRRLDHCFVGGMFAGRVRS 277 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 G+ SDH P+ ID D Sbjct: 278 VGADIGEVASDHFPLRIDIDL 298 >gi|218676698|ref|YP_002395517.1| hypothetical protein VS_II0936 [Vibrio splendidus LGP32] gi|218324966|emb|CAV26802.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 347 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 43/230 (18%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ N L ++N + + ++LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFEEWQKKQHWMAEAIRSLDCDVIGFQEIFSPKSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQ--SYPLLGAK 134 ++ K + F + ++ ++T IA R V LL A Sbjct: 67 EQLMNKLGYPYFAVVDSAD-----VEDDYLYTSPVVGIASRYPIENVQPVTPDSELLSAF 121 Query: 135 DSFSRAG-NRRAVELLVEING-KKIWVLDIHLKS---------FCFLDSLENTYSPSCSL 183 + + NR V + + +HLKS +D+ + P Sbjct: 122 NLGDKFSFNRTPVHATITLPHLGSTDCYVVHLKSQRPTEPRIESIDVDNAQQGEKPQSDT 181 Query: 184 LSQ-QAQWLKDWI-----------------TQKKESLVPFVIAGDFNRKI 215 L++ + L W+ + ++ P V+ GDFN+ + Sbjct: 182 LTRFHQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPL 231 >gi|190346925|gb|EDK39113.2| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 90/315 (28%), Gaps = 41/315 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSW--NINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ K+++ L + ASV + + + NI T S V K +R ++ Sbjct: 4 LVEKFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGN-LVPGEKPWSERKAGVIDSIK 62 Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 Y IV LQE G + + K W F + + Sbjct: 63 NYTSQ-HPTIVGLQEALRGQLDDIMKGLGP-EWKFFGVGGSGDTKGEYCPIIYKSNEWEL 120 Query: 117 RKKNVRVLQQ--SYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + L + P G + R A R +G+ I + HL Sbjct: 121 VNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVS------SGRTIHYFNTHLDP--HD 172 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 D + P + GDFN K + P Sbjct: 173 DHVRYESVRDIIT-----------YVNHTRQGSPVFLGGDFNAK-RTSAPYKYVATQMTP 220 Query: 231 ND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + K+ N+ + ID+ + K + S+ + ++ Sbjct: 221 ASIAPDPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDHGSKVKVD-SYEILSSTSGNVV-- 277 Query: 289 GKRLSDHCPISIDYD 303 +SDH P+ D+ Sbjct: 278 ---ISDHSPVIADFS 289 >gi|213156292|ref|YP_002318712.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] gi|213055452|gb|ACJ40354.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] Length = 783 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ K++DAD+ L E+ + Sbjct: 432 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIAN 490 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 491 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKPLNKAV- 544 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 545 ---VLDLGDKNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWN 601 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 602 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 661 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N + N +D+ + D + Y ++ + + YNE Sbjct: 662 GAQAYSYVFGVASDANGNGGVGN---LDHAIADADLYPKVVRTFAWHINADEPMVLDYNE 718 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 719 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 749 >gi|147898516|ref|NP_001079795.1| hypothetical protein LOC379485 [Xenopus laevis] gi|32450236|gb|AAH54251.1| MGC64462 protein [Xenopus laevis] Length = 345 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 102/316 (32%), Gaps = 71/316 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + C ++ S+NI + ++ + V LL + + I+ ++ Sbjct: 1 MTACFLQAGFAFKIASFNIQ----RFSMTKVDDPVV-----LELLIRILSRYE--IIAIE 49 Query: 73 EM---GSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 E+ + ++ V K + + S H R S + + A R+ V+ Sbjct: 50 EVMNADNTAIISLVKELSLATKLNYNVLISD-----HLGRSSYREKY-AYVYREDIVKPT 103 Query: 125 QQSYPLLG----AKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + G DSF R R V + ++ IH S Sbjct: 104 EWYHFDDGCENCGTDSFIREPFVARFTSLTTVVKDFA---LISIH-------------TS 147 Query: 179 PSCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 P +++ + L W+ K+ +I GD+N +Y+ + + + L+ Sbjct: 148 PDYAIM--EVDALYDAWVDAKQRLKMENILILGDYNAACSYVASRHWPIIRLRHVEELVW 205 Query: 237 F-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSR 288 ++ C D V + ++ ++ Y+ + Sbjct: 206 LIGDKEDTTVSTNTNCA----------YDRMVAGGEELQRGIVPDTAKAFNYHVAYDLTY 255 Query: 289 --GKRLSDHCPISIDY 302 K +SDH P+ ++ Sbjct: 256 EMAKAVSDHYPVEVEL 271 >gi|241661977|ref|YP_002980337.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864004|gb|ACS61665.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 248 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 85/249 (34%), Gaps = 45/249 (18%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F N + Y + H+ + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPNYTQLRYLATDVYPHTVYGRNAVYEHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F S + Sbjct: 93 LSRFPILLSEN---LDISDH--RFEQRGLLHAVTDLGFGEVHLLCAHF--GLFARSRQ-- 143 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +QA+ L D + P V+AGDFN N+ + I Sbjct: 144 ---------RQAEALVDRVRSVVPPDAPLVVAGDFN------DWNNRLDRMICQALGATE 188 Query: 237 FPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +K + + +++P +D + + + + S Sbjct: 189 V-ADKAADARPVRTFPSQMPWLRLDRIYV--RGFDIERAHAL---------TGREWAQRS 236 Query: 294 DHCPISIDY 302 DH P+ + Sbjct: 237 DHVPLLAEL 245 >gi|282877908|ref|ZP_06286717.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299909|gb|EFA92269.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 228 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 81/259 (31%), Gaps = 53/259 (20%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD------ 105 + L + K D V LQE+ + PK F S L H+ Sbjct: 11 ASLEELAYHIKAFKPDFVALQEVDCNTHRERA-PKQNGKNFISE--LAYHTGMFGLYGKT 67 Query: 106 -SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + + I + + + + L S++ R + E+ + HL Sbjct: 68 IDYSGGYYGIGMLARYPCIDMKKVMLPNP----SKSEQRAVMYATYEVGTDTLVFAVTHL 123 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD- 223 + + +QA+++ + + ++ P +I GDFN G + Sbjct: 124 -------DISGKDAR-----KEQAEFI---VQELQKCNYPVLIGGDFN-----AGPTEPA 163 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 K +D + + S KI IDY + ++ S + Y Sbjct: 164 IEKVMDKWGRNMTIMDQTYSSTTP------KIKIDYIYAYPKNR-WEVKTSQTVRSY--- 213 Query: 284 DIKSRGKRLSDHCPISIDY 302 LSDH PI + Sbjct: 214 --------LSDHFPIVSEI 224 >gi|260172862|ref|ZP_05759274.1| hypothetical protein BacD2_13418 [Bacteroides sp. D2] gi|315921145|ref|ZP_07917385.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695020|gb|EFS31855.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 290 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 84/315 (26%), Gaps = 40/315 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK ++ L + AQ++ + S+N+ S +R L Q Sbjct: 1 MRKLLIVLTLC--GVSILNAQQLNVASYNVRN-SNPNDAKAGNGWEQRCPV----LTQLI 53 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D DI QE+ + + + I RK Sbjct: 54 TFHDFDIFGAQEVKHNQLEDMLNALPAYNYIGVGRDDGKTKGE------YAPIFYRKDKF 107 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAV-------ELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L+ L + G A E + K W ++H+ Sbjct: 108 KLLKSGNFWLSEDTTKPNKGWDAAYTRICTWGEFKDKTGKFKFWFFNLHM-----DHIGV 162 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDP 230 S L+ + + + P ++ GDFN + + + Sbjct: 163 VARRESAKLVISKIKEM--------CGKDPVILTGDFNVDQTSESYQVLHESGILSDSYE 214 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + N N N+ ID+ + N + Sbjct: 215 VAQMRYATNGTCTGWNPNTYTPNR--IDHIFVTPNFTVEKYGVLTDTYRTKNETTGKYES 272 Query: 291 RL-SDHCPISIDYDF 304 + SDH P+ F Sbjct: 273 HIPSDHFPVKAVLRF 287 >gi|169796594|ref|YP_001714387.1| putative extracellular nuclease [Acinetobacter baumannii AYE] gi|215484055|ref|YP_002326280.1| nuclease [Acinetobacter baumannii AB307-0294] gi|301510758|ref|ZP_07235995.1| nuclease [Acinetobacter baumannii AB058] gi|301595167|ref|ZP_07240175.1| nuclease [Acinetobacter baumannii AB059] gi|332853534|ref|ZP_08434798.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] gi|169149521|emb|CAM87410.1| putative extracellular nuclease [Acinetobacter baumannii AYE] gi|213986940|gb|ACJ57239.1| nuclease [Acinetobacter baumannii AB307-0294] gi|332728567|gb|EGJ59939.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] Length = 812 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKPLNKAV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 574 ---VLDLGDKNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N + N +D+ + D + Y ++ + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGVGN---LDHAIADADLYPKVVRTFAWHINADEPMVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|119470140|ref|ZP_01612906.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7] gi|119446561|gb|EAW27835.1| hypothetical protein ATW7_13643 [Alteromonadales bacterium TW-7] Length = 394 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 37/226 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFLQEMGSYNA 79 ++++ ++N+ E + + +Y D++ QE+ S + Sbjct: 41 ELKIATFNLFNYLEPPNAYYEFERIYTAEQWARKQRWITEYINEQQPDVIGFQEIFSIES 100 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL-------LG 132 + ++ + F ++ + IA + V V+ + L Sbjct: 101 LKELMLNQGYNHFAVVDK-PHVIDDFIFKHPVVGIASKYPIVDVIAVEHDEELACSLGLT 159 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 SFSR R V L + +H KS + ++ + + LK Sbjct: 160 QAFSFSRKVLRATVTL---PHLGDTDCYVVHFKSK-RGMLEVDEHNKAVTAEQNIIDILK 215 Query: 193 D-----W-----------------ITQKKESLVPFVIAGDFNRKIN 216 W IT+++ + P V+ GDFN + Sbjct: 216 ANVAGSWGSTIQRGSEATLLMIQMITRREATQNPMVLMGDFNNDLA 261 >gi|117919422|ref|YP_868614.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] gi|117611754|gb|ABK47208.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] Length = 377 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 80/243 (32%), Gaps = 44/243 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADI 68 L T S +++ + N+ E + + + + Q+ L DI Sbjct: 8 LSSLTESTQSNIKIATVNLFNFIEPPS-AFYDFENIYSHGQWQKKCQWFSELLNQHHPDI 66 Query: 69 VFLQEMGSYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 V QE+ S + ++ + + S + ++ + + + + + + + Sbjct: 67 VGFQEVFSPEPLRQLALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPE 126 Query: 126 QSYPL---LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFL 170 + L ++ SFSR R V + +H KS L Sbjct: 127 ANLVAAMGLSSEFSFSRKVLRATVAV---PQIGPCDCYVVHFKSKRAGLALEPHPLGLSL 183 Query: 171 DSLENTYSPSCSLLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNR 213 ++ + + + L + Q L W + +++ + P ++ GDFN Sbjct: 184 NAPSDLKLHAETKLLTE-QALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFND 242 Query: 214 KIN 216 ++ Sbjct: 243 SLS 245 >gi|332868399|ref|ZP_08438130.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] gi|332733398|gb|EGJ64581.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] Length = 812 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKPLNKAV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 574 ---VLDLGDKNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N + N +D+ + D + Y ++ + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGVGN---LDHAIADADLYPKVVRTFAWHINADEPMVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|300743782|ref|ZP_07072802.1| exodeoxyribonuclease III [Rothia dentocariosa M567] gi|300380143|gb|EFJ76706.1| exodeoxyribonuclease III [Rothia dentocariosa M567] Length = 275 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 83/279 (29%), Gaps = 53/279 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + D DI+ LQE+ + + + + + ++ W I ++ + H Sbjct: 19 MATWLAGRDVDILCLQEVRAPDKIVRELLNEDDWNILHAEAAAKGRAGVLVATRKHP--- 75 Query: 116 VRKKNVRVLQQSYPLLGA--KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + Q +D F+ AG + + G+ + V+ ++ S Sbjct: 76 -NANGELLKNQPVATRSTIGEDYFADAGRWVEADYTLPT-GETLTVVSAYVHSGEVGTPR 133 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD---------- 223 ++ L + L + + +I GD N L + Sbjct: 134 QDDKY---RFLDRMLVRL----PELAQHSDHVLIVGDLNVGHTELDIKNWKANQKRAGFL 186 Query: 224 ---------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQN 265 F+ I D + E + IDY Sbjct: 187 PEERAYFDKFFGEIGYEDVARKLAGEVPG---PYTWWSYRGKAFDNDAGWRIDY----HM 239 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A L ++ + D S +R SDH P+ +DY F Sbjct: 240 ATPALAAKAVEATV---DRAASYDERFSDHAPLVVDYQF 275 >gi|261362103|gb|ACX71485.1| sphingomyelinase [Bacillus mycoides] Length = 244 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 25/204 (12%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +++++ N+ LS L+ N + +D Y K + D+V L E+ NA + Sbjct: 36 TLKVMTHNVYMLSTN----LYPNWGQNERADLIGAADYMK--NQDVVILNEVFDNNASNR 89 Query: 83 VFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 + N + + ++ + + + D AI + V +Q + Sbjct: 90 LLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIVEKIQYVFEKG 149 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D+ S G V V+ N + + V+ HL++ D++ SP+ S+ ++Q Q + Sbjct: 150 CGPDNLSNKGF---VYTKVKKNDRFVHVIGTHLQA---EDNMCGQTSPA-SVRTKQLQEI 202 Query: 192 KDWITQKKESLVPFV-IAGDFNRK 214 +++I K +V I GD N Sbjct: 203 QEFIKNKNIPNNEYVLIGGDMNVN 226 >gi|218463283|ref|ZP_03503374.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5] Length = 263 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 85/283 (30%), Gaps = 62/283 (21%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 + L Q+ K+ D DIV LQE+ K + + + + Sbjct: 12 KARIDNLTQWLKDSDPDIVCLQEI-------KTIDEGFPRLEI---EALGYHVETHGQKG 61 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 +A+ K A D S R + N + + V I+L + + Sbjct: 62 FNGVAILSKTSPSEVNRGLPGDALDEQS----RFLEAVFTLPNTRILRVCCIYLPNGNPV 117 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----DFWK 226 ++ + Y + + L+ + ++ V+AGD+N +D W+ Sbjct: 118 ETEKYPYKLA------WMERLRSFAAERLAYEEMLVLAGDYN---VIPEPHDCFDPKVWE 168 Query: 227 ----------------TIDPNDSLIRFPKEKD---------SRCNANKNLRNKIPIDYFV 261 +R + + N I ID+ + Sbjct: 169 NDALFLPQTREAFRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPK---NNGIRIDHLL 225 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + A + + + + ++ SDH P+ +DF Sbjct: 226 LSPEAADRMTSAAIEKHV-------RAWEKPSDHVPVIAYFDF 261 >gi|168700428|ref|ZP_02732705.1| probable secreted protein [Gemmata obscuriglobus UQM 2246] Length = 263 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 89/314 (28%), Gaps = 87/314 (27%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 +L L + +R++++NI+ +G D + + K Sbjct: 8 VLLGLAGLVPADDKPERNVLRVLTYNIHHGEGTDG-----------KLDLARIAEVIKAA 56 Query: 65 DADIVFLQEMG---------SYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 D+V LQE+ A +AK+ N K + Sbjct: 57 KPDVVALQEVDRNTTRTGKVDQAAELAKLTGLN-----------AEFGKAIDLQGGGYGL 105 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK------IWVLDIHLKSFC 168 AV +PL GAK R+ +++++ + + L+ HL Sbjct: 106 AV--------LSRFPLKGAKVHSLPGKERQEARIVLQVTVEPGGPFPALTFLNTHL---- 153 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG----NNDDF 224 +Q + + FV+AGD N + Sbjct: 154 --------QHDDGPTREKQIAKIDELFGTAAG---AFVLAGDLNAAPASAPIKALAKNWA 202 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + T L+ P + + IDY + + + + E+ Sbjct: 203 FATEPGRKGLLTIPSDTP-----------RQQIDYILFRPADRFRVAEANV-----IEEK 246 Query: 285 IKSRGKRLSDHCPI 298 + SDH P+ Sbjct: 247 VA------SDHRPV 254 >gi|113867383|ref|YP_725872.1| exonuclease III [Ralstonia eutropha H16] gi|113526159|emb|CAJ92504.1| Exonuclease III [Ralstonia eutropha H16] Length = 276 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 88/315 (27%), Gaps = 65/315 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFL 71 + + +R+ SWN+N+L R L + + D + L Sbjct: 1 MSAAALPASGPLRIASWNVNSL------------KVRLPQVLQWLAEQDQTGAPIDALCL 48 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ P + + + + + I+T + + + Sbjct: 49 QELK--------LPDDKY--------PLAELENAGFHSIYTGQKTYNGVAILARDASMPG 92 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A + G A + ++ + ++ + + DS + Y + + Sbjct: 93 PADVVRNIPGFEDAQQRVIAATYGDLRLVCAYFPNGQAPDSDKFVYK------LKWLDAM 146 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFP------------ 238 W+ ++ + + GDFN +D W+ + R Sbjct: 147 TAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPQERAAFAALVELGLADA 206 Query: 239 -KEKDSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 ++ + A ++ ID+ ++ D + Sbjct: 207 FRQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILLSPALTSGCSACVI-------DRVPRT 259 Query: 289 GKRLSDHCPISIDYD 303 ++ SDH P+ Sbjct: 260 WEQPSDHTPVVATLS 274 >gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis 12822] gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis] gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] Length = 286 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 24/152 (15%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 L D+VFLQE+ N V+ V S + N I T + Sbjct: 34 LRPDLVFLQEVQGRNEVSSVLHAQ----HESLAAALRLQAAYGRNAIRTG----TDHGNA 85 Query: 124 LQQSYPLLGAKDSFS---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L + +L ++ R R + +++ G ++ +HL F S Sbjct: 86 LLSRFDILDHENQDISDHRLEQRGLLHARIDVGGTEVHCFVVHL--GLFAGSRG------ 137 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q Q L D I Q P +IAGDFN Sbjct: 138 -----RQIQALTDRIRQSVPDGAPLLIAGDFN 164 >gi|118379737|ref|XP_001023034.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89304801|gb|EAS02789.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 345 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 21/172 (12%) Query: 65 DADIVFLQEM----------GSYNAVAKVFPKN-TWCI-FYSTERLINHSKRDSNNDIHT 112 DAD++ L E+ +A+ F + + + F + + Sbjct: 112 DADVIILSEVARDCPQWGSYNGAEEIARAFKMDWAYSVEFLELDNSLFKLGYQCTIGN-- 169 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 AI + ++Q+ + RAG R V + I I ++ HL+S + Sbjct: 170 AILSNRPLSNIIQKQFKTQCCM-FSGRAGGR--VAIKATIESYNITLISSHLESG----T 222 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + + +Q+Q L D I +E +I GDFN + F Sbjct: 223 GFEDFIDAMITREKQSQELVDMIDPIEEENKLIIIGGDFNSPLRQFNKGKPF 274 >gi|73540991|ref|YP_295511.1| exodeoxyribonuclease III [Ralstonia eutropha JMP134] gi|72118404|gb|AAZ60667.1| Exodeoxyribonuclease III [Ralstonia eutropha JMP134] Length = 275 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 90/326 (27%), Gaps = 89/326 (27%) Query: 14 VPCTASVAQKVRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + + +R+ SWN + L+EQE Sbjct: 1 MSAVLPTSGPLRIASWNVNSLKVRLPQVLQWLTEQEQAGAPI------------------ 42 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKN 120 D + LQE+ P + + + L N T +A+ ++ Sbjct: 43 ----DALCLQELK--------LPDDKYPLA----ELENAGFHSVYTGQKTYNGVAILARD 86 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + ++ F A R +V I ++ + + DS + Y Sbjct: 87 AS-MPGPVDVVRNIPGFEDAQQR-----VVAATYGDIRLVCAYFPNGQAPDSDKFVYK-- 138 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFP- 238 + + W+ ++ + GDFN +D W+ + R Sbjct: 139 ----LKWLDAMTAWLREELAKYPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAAF 194 Query: 239 ------------KEKDSRCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSE 277 ++ + A ++ ID+ ++ + S S Sbjct: 195 TALVELGLADAFRKFEQPEKAFSWWDYRMFAFRRNAGLRIDHILLSPE-----LASSCSA 249 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 + D ++ SDH P+ + Sbjct: 250 CV--IDRAPRTWEQPSDHTPVVATLN 273 >gi|74318453|ref|YP_316193.1| exodeoxyribonuclease III [Thiobacillus denitrificans ATCC 25259] gi|74057948|gb|AAZ98388.1| exodeoxyribonuclease III xth [Thiobacillus denitrificans ATCC 25259] Length = 255 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 74/299 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L + L D+ R+ D+V LQE Sbjct: 1 MKIAAWNVNSLKVRLPQLL----------DFLATRR------PDVVCLQETK-------- 36 Query: 84 FPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + + + S + S + +A+ + + S + G D R Sbjct: 37 VPDDAFPSVELS---AAGYRAVFSGQKTYNGVAILSR-SQATDVSVGIPGFGDEQKR--- 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 ++ + V+ ++ + DS + Y + L W+ ++ Sbjct: 90 ------VIAATVEGTRVVCVYCPNGQSPDSDKYFYKLA------WFDALSLWLMEELARH 137 Query: 203 VPFVIAGDFNRKINYLGNNDD-FWK-----------------TIDPNDSLIRFPKEKDSR 244 + GDFN +D W+ + DS F + + S Sbjct: 138 PRLAVLGDFNIAPEDRDVHDPKAWEGSVHVSPRERERFQALLQLGLKDSFRLFEQPEKSF 197 Query: 245 CN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ID+ ++ + D + +R SDH P+ Sbjct: 198 SWWDYRMMGFRRNHGLRIDHILLTDALAASCTSSTI-------DRDMRKLERPSDHAPV 249 >gi|83816161|ref|YP_446950.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber DSM 13855] gi|83757555|gb|ABC45668.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM 13855] Length = 270 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 36/160 (22%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + +D D+V LQE+ S + + + + +S E N T + R Sbjct: 18 IEAVDPDVVALQEI-SEPRLRHIADELDYYFHHSDEHEANEED--------TGLLSRYPI 68 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY--- 177 R R L + ++ I + ++HL + + Sbjct: 69 SR------------------PTRYGALLYLTVDD-PIRIANVHLSPYPYEPYALRDDEMT 109 Query: 178 -----SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + S + + + D +++ + VP + GDFN Sbjct: 110 PREAVAQARKTRSPEIKPVLDALSKSVQEDVPTFLMGDFN 149 >gi|313158737|gb|EFR58124.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 318 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 107/322 (33%), Gaps = 58/322 (18%) Query: 1 MIRKYVLALVFFLVPC----TASVAQK------VRLVSWNINTLSEQEGVSLWKNSVKRT 50 M + ++L L L C +A+ A+ R+++ N+ E + + Sbjct: 18 MKKSFMLCLAGCLAACVTAVSATAARPASGQPATRVMTCNVRITGLPEDETAGRRWEDCR 77 Query: 51 TSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSN 107 + +R Y D++ +QE+ SYN + F + + + ++ + +++ Sbjct: 78 DACLKAIRMY----RPDVICMQEVIYDSYNYFKEKF--SDYVAYGFAGPEMDPYTEGYHF 131 Query: 108 NDIHTAIAVRKKNVRVLQ-----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVL 160 + +K+ V PL S++ R + + +G + VL Sbjct: 132 IGKNVIFFSKKRYEFVSSGCYWLSETPLAAGSCSWNTMRARHCNWVRLRDRKSGAEFRVL 191 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 DIHL D + +Q + + Q + P +I GDFN I Sbjct: 192 DIHL------DHKSDDARR------EQMKMIVGECAQYAD-GFPQIICGDFNSGIENAPV 238 Query: 221 ---NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLIQE 273 D W+ + P E + K + ID+ + N L Sbjct: 239 ACLRDAGWQE---AYEAVHGPGEAGFTYHGFKGPDYRKKNARRIDFIFVRGN----LQPV 291 Query: 274 SFSEILYNEDDIKSRGKRLSDH 295 + + D + SDH Sbjct: 292 AAEILRDKVDGLYP-----SDH 308 >gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + L+ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPLHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|242208449|ref|XP_002470075.1| predicted protein [Postia placenta Mad-698-R] gi|220730827|gb|EED84678.1| predicted protein [Postia placenta Mad-698-R] Length = 1134 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 104/331 (31%), Gaps = 61/331 (18%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINT----LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L + T+ + R++SWN+ T L+ + + +LLR+ Sbjct: 808 LPLTSMATTSMATRATRILSWNVETPVPFLNLPPRKVGTSSVPPGSR--LSLLRELIARH 865 Query: 65 D-ADIVFLQE-----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D D V LQE + A K + + S R + R + Sbjct: 866 DFPDFVCLQEVRARQSDKEWIVALKAAANKSDSGPKYTAYMSLNRAL-RGPRHFGVITYV 924 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A K + + G + + + W + + + Sbjct: 925 KDA--HKIAVSREVDWDAEGRVIILEMKSGWALLNVYALNGSEYFWRDPLGQNAPKTRNE 982 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------------RKI 215 + ++ LL Q+ Q + + + V+ GDFN + Sbjct: 983 RKRDFN---RLLMQECQAM-------RARGLRLVLIGDFNISLTKKDCVPRLRTEYPHSL 1032 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMDQNAYKFLI 271 N++F T+D D + R + + + +DY ++ + +I Sbjct: 1033 ARKEFNEEFIPTLDVVD-VYREVHGQKAAFSWFVKGKPQGADAARVDYALVQRTLMDRVI 1091 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E +Y+ED ++ SDH P+++ Sbjct: 1092 -----ETMYHEDSVERAH---SDHAPLTLAL 1114 >gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + L+ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPLHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + L+ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPLHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|306827643|ref|ZP_07460923.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC 10782] gi|304430206|gb|EFM33235.1| endonuclease/exonuclease/phosphatase [Streptococcus pyogenes ATCC 10782] Length = 910 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|139474060|ref|YP_001128776.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes str. Manfredo] gi|134272307|emb|CAM30561.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus pyogenes str. Manfredo] Length = 910 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|94990135|ref|YP_598235.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] gi|94543643|gb|ABF33691.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] Length = 910 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|94988256|ref|YP_596357.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94992130|ref|YP_600229.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] gi|94541764|gb|ABF31813.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94545638|gb|ABF35685.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] Length = 910 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|50913934|ref|YP_059906.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10394] gi|50903008|gb|AAT86723.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10394] Length = 910 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|239503516|ref|ZP_04662826.1| putative extracellular nuclease [Acinetobacter baumannii AB900] Length = 812 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 104/333 (31%), Gaps = 64/333 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEM-- 74 A +R+ S+N+ + T +++ + K++DAD+ L E+ Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEITN 519 Query: 75 -----GSYNA-VAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 S A + + + I + R ++ I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-------PENLDRLGSDVIAVAIIYNSKRVKPLNKA 572 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C 181 D + A K V+ HLKS C ++ + C Sbjct: 573 V----VLDLGDKNRTTLAQTFQAVRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGC 628 Query: 182 --SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTI 228 + + W+ + + ++ GD N + + N + Sbjct: 629 WNPTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKV 688 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILY 280 + S N N N +D+ + D + Y ++ + + + Y Sbjct: 689 GQGTQAYSYVFGVASDANGNGGAGN---LDHAIADADLYPKVVRTFAWHINADEPTVLDY 745 Query: 281 NEDDIKSRGKRL---------SDHCPISIDYDF 304 NE+ K L SDH P+ +D D Sbjct: 746 NEEYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|254420582|ref|ZP_05034306.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] gi|196186759|gb|EDX81735.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] Length = 265 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 87/314 (27%), Gaps = 84/314 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +RL +WNIN + R + ++ D++ LQE+ Sbjct: 2 TLRLATWNIN------------SVRLR----IDQVARFVAERAPDVLLLQEI---KCTTD 42 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP+ + + + H + H +A+ + ++ + + + Sbjct: 43 QFPRAAF-----EDMGMPHLRVAGQKGWH-GVAIASRLPLEDSDTFQVCKLGHARCVSAQ 96 Query: 143 RRAVEL---LVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +++ + G L+ + + +Q I + Sbjct: 97 VAGIDVQNFYIPAGGDVPDRTLN-----------PKFDHKMD---FYEQLTA----IVAR 138 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF----WKTIDPNDSLIRFPKEK------------- 241 ++ P V+AGDFN G D F I + + + Sbjct: 139 QDKSRPLVMAGDFN---IAPGEGDVFNHRYMSKIVSHTPIEVETLNRLQATGGFADVLRD 195 Query: 242 --DSRCNANKNLRNKI----------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + +D+ + +++ D Sbjct: 196 RFPEPQKLASWWSYRAADFRKSNRGLRLDHIWTSPGLTPAVAKDTARI-----HDDVREW 250 Query: 290 KRLSDHCPISIDYD 303 R SDH P+++D D Sbjct: 251 DRPSDHAPVTVDLD 264 >gi|169633174|ref|YP_001706910.1| putative extracellular nuclease [Acinetobacter baumannii SDF] gi|169151966|emb|CAP00827.1| putative extracellular nuclease [Acinetobacter baumannii] Length = 812 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ + K++DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R + I AI K V+ L ++ Sbjct: 520 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGTDVIAVAIIYNSKRVKPLNKAV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 574 ---VLDLGEKNRTTLAQTFQAIRGNKTFTVIPNHLKSKGCSGVDANSSDADQNDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDTKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D + Y ++ + + + YNE Sbjct: 691 GAQAYSYVFGVASDANGNGGAGN---LDHAIADADLYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|326316303|ref|YP_004233975.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373139|gb|ADX45408.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] Length = 258 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 70/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 ++L +WN+N+LS R L + D + LQE V + Sbjct: 1 MKLATWNVNSLS------------VRLPQVLAWLAD-----NPVDAIGLQE---LKLVDE 40 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + + +A+ + + G +D+ +R Sbjct: 41 KFPHDAFE-------AAGYHAVTFGQKTYNGVAILSRAPVRDVVRN-IPGHEDAQARV-- 90 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + ++ + ++ + + T + +L L W+ ++ + Sbjct: 91 ---IAATLDTPQGPLRFINCYFVNG----QAPGTEKFAYKMLW--LDALHRWVREELLAH 141 Query: 203 VPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSR 244 V+ GDFN I++ ++++ D+ F + + S Sbjct: 142 PRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHFQSLLQLGLTDAYRMFDQPEKSF 201 Query: 245 CN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + + + D + + SDH P+ Sbjct: 202 SWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTI-------DRQPRKNPQPSDHAPVV 254 Query: 300 IDY 302 Sbjct: 255 ATL 257 >gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes L99] Length = 256 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 27/159 (16%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + +GK+ ++ + HL + S L + Q K I P ++ G Sbjct: 120 ADSDGKQFYLFNTHL----------DHISEEARLFASQLLLKKAAI---IAENSPVIVLG 166 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC----NANKNLRNKIPIDYFVMDQN 265 DFN + N N + + + P + + C + + IDY + Sbjct: 167 DFNTQPNTPTYN-YITEKYQDAQLISQKPAKGPTGCFHDFHPLRPENELEKIDYIFVS-- 223 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F Y + G SDH P++ + D+ Sbjct: 224 -------NEFQVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNIVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRIQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] Length = 237 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 98/288 (34%), Gaps = 66/288 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------GSY 77 R+V++NI G+ K DY + Q+ + AD+V LQEM + Sbjct: 3 RIVTYNI-----HSGIGRDK------KQDYKRIGQFLASSGADVVLLQEMDTRPPERDTA 51 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V + +NT+ + S + R+++ AI R + G + Sbjct: 52 QDVRDICAENTFKLIPS------PAIREADGWYGNAILTRYDVLSNDTVDVSQSGRQ--- 102 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + ++ + V++ H L+ S Q L + ++Q Sbjct: 103 ----PRNVQIVELKTEKTPLTVVNTH-------KGLKKLERRS------QFSLLHEHLSQ 145 Query: 198 KKESLV-PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + P V+AGDFN + + + ++K + Sbjct: 146 RLKEKQTPLVLAGDFN---------EWQFFSKAFKGLNSLLFQQKVGATFPS-------- 188 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +F + ++ + + + K+R SDH P+ ID + Sbjct: 189 --HFPVFSLDRVWVTDDIKVKACRKLKNAKTRVY--SDHLPVLIDIEL 232 >gi|325283015|ref|YP_004255556.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP] gi|324314824|gb|ADY25939.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP] Length = 264 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 41/254 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + D++ LQE+ + A+ +V + + + + ++ +A+ Sbjct: 33 LEDWLTRHAPDVLLLQEVRAP-AMPEVLEALGY----------HSAWHPAQKAGYSGVAI 81 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + LG A R L+ + ++L S + ++ Sbjct: 82 ASRLPLQDVR----LGMGHEAMDAEGR-----LISAQVAGVRFASVYLPSGSSGEVRQSF 132 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI- 235 LL Q W ++ + P VI GD+N I + + W++ N + Sbjct: 133 KDR--LLLDYQI-----WTD-RQRTQGPLVIGGDYN--IAHQPIDLKNWRSNQNNSGFLP 182 Query: 236 ----RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS---- 287 S + + L +Y + + +++ Sbjct: 183 HEREWMTAHLASGLSDSHRLHLGERAEYTWWSNRGQAYTNDTGWRIDYLLTSQVQTADVW 242 Query: 288 --RGKRLSDHCPIS 299 R RLSDH P++ Sbjct: 243 VDRPARLSDHAPLT 256 >gi|304410326|ref|ZP_07391945.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183] gi|307301963|ref|ZP_07581721.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175] gi|304351735|gb|EFM16134.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS183] gi|306914001|gb|EFN44422.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica BA175] Length = 398 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 62/204 (30%), Gaps = 49/204 (24%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L ++ + DIV QE+ S + ++ + ++ A+A Sbjct: 66 LSEFLAHRQPDIVGFQEVFSPEPLKRI-ASEQGLVHFAVIDAPTLISDYIYRSPVVALAS 124 Query: 117 RKKNVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--- 166 R V + L ++ +FSR R VE+ + K +H KS Sbjct: 125 RYPIVEISSVEPDARLVAAMGLSSEFTFSRKVLRATVEV---PHIGKCDFYVVHFKSKRA 181 Query: 167 FCFLDSLENTYSP----------------SCSLLSQQAQWLKDWITQ------------- 197 L+ P LL++Q L W + Sbjct: 182 GLALEPKRFENQPLGFDNSAPAASMKLHSETQLLTEQ--ALGRWASTMQRGAEAALLFNG 239 Query: 198 ----KKESLVPFVIAGDFNRKINY 217 ++ S P ++ GDFN + Sbjct: 240 ILVRRQASKHPVIVMGDFNDSLTM 263 >gi|262373770|ref|ZP_06067048.1| exodeoxyribonuclease III [Acinetobacter junii SH205] gi|262311523|gb|EEY92609.1| exodeoxyribonuclease III [Acinetobacter junii SH205] Length = 280 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 88/275 (32%), Gaps = 65/275 (23%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + + ER + Sbjct: 38 LLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFPAERAG-----------YAGT 86 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + + ++ DS R + E + + + ++L S Sbjct: 87 AIYSRLPFITVKNGLGFELADSQGRF-------ITAEFDLGLSHPVHIASLYLPSG---S 136 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RKINY 217 S E+ + L + A+ LK W ++ ++ GD+N +K + Sbjct: 137 SGEDAQARKDLFLLEYAKILKQW----RDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSG 192 Query: 218 LGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAY 267 ++ W I + + +E N+ IDY + Sbjct: 193 CLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYQACSPDWK 252 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +Y E SDH P+ IDY Sbjct: 253 ----ARTTNAWVYKEQWF-------SDHAPVIIDY 276 >gi|163802061|ref|ZP_02195957.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] gi|159174202|gb|EDP59010.1| aspartyl-tRNA synthetase [Vibrio sp. AND4] Length = 428 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 42/293 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++++N+ + G ++ D R + D DIVF+QE+ Sbjct: 163 DSLKVLTYNV-WMLPHVGSNM----------DIRATRIAEEVKDHDIVFMQEV-----FR 206 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSN---NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + KN I+++ ++ + ++ + V ++ QS + Sbjct: 207 R---KNEEDIYFTMNEHFDYISDKLDGGGSNTYDGGVVTFSKFPIITQSQYVFNNCIGTD 263 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A ++ + + + +L++HL S + +L Q +K ++ Q Sbjct: 264 CAADKGVLYTKILKDDHNFHLLNLHLGS------WNSRSHRDVRIL--QIYEIKAFLEQL 315 Query: 199 KE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR----- 252 P ++ GDFN Y D N + N+ Sbjct: 316 SIPDGEPIILGGDFN-IAKYKFPLDFSMLLDSLNLLEPELTGPLKYSYDPLVNINLAGGD 374 Query: 253 --NKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +DY + +D A + E+L N D G LSDH +S + Sbjct: 375 AAERERLDYLLYVDNGAIASSTAK--IEVLRNFDAAMWGGWDLSDHHAVSSTF 425 >gi|229917919|ref|YP_002886565.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229469348|gb|ACQ71120.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 247 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 104/295 (35%), Gaps = 65/295 (22%) Query: 24 VRLVS---WNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 +R+ + WN +TL KR + Q K ++AD++ LQE+ SY Sbjct: 1 MRIATYNIWNHDTL-----------WQKR----IDAICQEVKRINADVIALQEVRSYEKG 45 Query: 79 AVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 +VA + T +C+F++ + +A K ++ ++ Sbjct: 46 SVAHDIAEATGYPYCVFHAYPDSPDE-----------GLAFLSKVPFSSVEAIWEEDVEE 94 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S A + + G++ + ++HL + ++ C Q + ++DW+ Sbjct: 95 SNFC-----ATRVTLIFGGQEWGLTNVHL-------NWRSSSIREC-----QMEVVRDWL 137 Query: 196 TQKKESLVPFVIAGDFN-RKIN--YLGNNDDFWKTIDP-NDSLIRFPKEKDSRCNANKNL 251 + K V+ GDFN + Y +D W + R + + Sbjct: 138 S-KGHQKAIEVLCGDFNDHPQSTIYDDVSDAGWLDVTTFVGEEARPTLDVKHNPYLQSSH 196 Query: 252 -RNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 D+ + + +Q F ++ + D + SDH + +D+ Sbjct: 197 LEQPERYDWILFRSEWSELEVQHVDVFGDMRTSRDVVP------SDHYGVVVDFT 245 >gi|169116575|gb|ACA42592.1| Mpc [Enterobacter sp. Ceibso-001] Length = 253 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 83/257 (32%), Gaps = 45/257 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P F + +++ + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPMHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV + + + +S R + I V +HL Sbjct: 93 HHGNAVLSRFP-IEHYENRDVSVGESEKRGLLY--CRITPPALDFPIHVGCVHL------ 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKT 227 L + + Q Q L DW P V+AGDFN ++ N+ + Sbjct: 144 -GLREAHRQA------QLQMLADWTNAL-PEGEPVVVAGDFNDWRQRANHPLKVKAGLEE 195 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 I SR + + P+ +D+ K S + + Sbjct: 196 IF-----------TRSRGRPARTFPVRFPL--LRLDRIYVKNAHASSPTAL------ALL 236 Query: 288 RGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 237 NWRHLSDHAPLSAEIHL 253 >gi|269124631|ref|YP_003298001.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268309589|gb|ACY95963.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 268 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 95/291 (32%), Gaps = 42/291 (14%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + V + S+N + N +R Y + + ++ D D+V QE+ ++ Sbjct: 5 AGRGVTVASFN-----TRGLPLFGSNLAER----YRAIAAFFESSDIDVVNFQEVFTHRH 55 Query: 80 VAKV-FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ L+ + R + + +PLL + Sbjct: 56 LRLLSAGMPSFRHLAYRRALVGPAGGLVTLS-------RLPTGKSGYRRFPLLPSSPGLP 108 Query: 139 RAGNRRAV----ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R R L+ + + + V++ H + + + +S + Q L Sbjct: 109 RT-VRFKAALKGALITPLRDQGVCVINTH-----PVANGDGDWSDANRFRPLQQGQLTAL 162 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRN 253 +E P V+ GDFN + + D T + + P + + Sbjct: 163 ARLVQEIEDPVVVCGDFNVARDSTLHRDFLATTGLVDAFAGSCPPTFHSAYLKPG---QR 219 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH-------CP 297 ID+ ++ K + ES + + + + LSDH CP Sbjct: 220 PHCIDFILV----AKSIGVESTGTLFTDREPLAGGPSYLSDHIGLYARLCP 266 >gi|293368736|ref|ZP_06615341.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298480109|ref|ZP_06998308.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|292636201|gb|EFF54688.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298273918|gb|EFI15480.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 611 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + ER H+ I + Sbjct: 53 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + HL E Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYCCT----------HL------SLTEGDRM 152 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S + +K I P +AGD N DF K + + ++ P Sbjct: 153 KS-------LEIVKSLI---ASYKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ K IDY + + S + SDH PI Sbjct: 198 EKHTYPA-----PDPKEAIDYIAVSKQNATGFAVISAKVVN---------ELMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|29293902|gb|AAO63565.1| RNA editing complex protein MP100 [Trypanosoma brucei] Length = 902 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 96/300 (32%), Gaps = 35/300 (11%) Query: 19 SVAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 V ++L++WN+ + S + + Y ++ + + DAD+V +QE+ Sbjct: 613 PVKASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPKRYPVIAKIIEEEDADVVGMQEVEP 672 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 VF + F S LI S + AIA + + ++ P+ Sbjct: 673 ------VFWE-----FLSKRALIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYL 721 Query: 137 FSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A + +++ + + HL + + S EN + Q L+ Sbjct: 722 NVPAWTNHVSLMPVVGLKMVHGTVHIAAAHLLAP-YTKSHENARTS-------QDTALRH 773 Query: 194 WITQKKESLVPFVIAGDFNRK------INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + K V GDFN + + D W + PN+ + ++ C Sbjct: 774 HM-TKTLGGGDVVTMGDFNDWPTNEFIMPHESQYVDCWPVLHPNNPGKTMDE-TNTFCKL 831 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 D + + + ++ + SDH +SI + Sbjct: 832 KVEEMFFGRSDKVFLRSRRLVPVEAHLVGTRSVNDENNNADAPAYLFPSDHYGVSITFSL 891 >gi|317401442|gb|EFV82074.1| hypothetical protein HMPREF0005_00913 [Achromobacter xylosoxidans C54] Length = 288 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 69/197 (35%), Gaps = 44/197 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI +R + + L Y L D+VFLQE+ Sbjct: 4 IRVVSYNI--------HKGRSALGRRDSLNELRLGLY--GLRPDLVFLQEVQ-------- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRK--KNVRVLQQSYPLLGAKDSFS 138 +N H + + A A+R + L +P+L ++ Sbjct: 46 -GRNEQKSLLD----AQHESLAAALKLDVAYGRNAIRHETDHGNALLSRFPILDHENQDI 100 Query: 139 ---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + +E++G+ + +HL F S +Q L + I Sbjct: 101 SDHRLEQRGLLHATIELDGRSVHCFVVHL--GLFAGSRS-----------RQILALTERI 147 Query: 196 TQKKESLVPFVIAGDFN 212 + P +IAGDFN Sbjct: 148 RRMVPDGEPILIAGDFN 164 >gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|167615248|ref|ZP_02383883.1| extracellular nuclease, putative [Burkholderia thailandensis Bt4] Length = 622 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 104/325 (32%), Gaps = 67/325 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R + ++ + K LDAD++ L E+ Sbjct: 292 LRVASFNVLNYFNSDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ ++W + D + A+ + ++ Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVV------------DPGSARLGGDAIAVALIYDSRKVK 399 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FC---FLDSLENTYSPSC- 181 P+ A NR+ + + + + V HLKS C D L+ C Sbjct: 400 PVGNAATLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCW 459 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A + DW+ + ++ GD +N D +T++ + Sbjct: 460 NATRSRAAAKVADWLARNPTGAHSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVS 514 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSE 277 + + + +D+ + Y + + + Sbjct: 515 SKIGAPAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQ 574 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 575 RTYYAPD----AYRSSDHDPVLIDI 595 >gi|170726264|ref|YP_001760290.1| endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] gi|169811611|gb|ACA86195.1| Endonuclease/exonuclease/phosphatase [Shewanella woodyi ATCC 51908] Length = 940 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 102/337 (30%), Gaps = 55/337 (16%) Query: 13 LVPCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTS-DYTLLRQYAKN----LDA 66 + + + + S+N +N + + T+ ++ R + +DA Sbjct: 446 TLAPELAAGGNLTVASFNVLNYFNGDGAGGGFPTPRGADTATEFERQRAKIISAMVGIDA 505 Query: 67 DIVFLQEMG-----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVR--- 117 D+ L E+ S +A+A + I + +N D I + R Sbjct: 506 DLFGLMEIENDGFGSDSAIADLVSGLNTAIGETRYGYVNAGGSSIGTDAIAVGMIYRLDK 565 Query: 118 ------KKNVRVLQQSYPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKS--- 166 K + GA F+ NR + V + + V H KS Sbjct: 566 VSPQGAAKILSTANSPLDDAGAP-LFNDGKNRPMLTQSFSVNDSDESFVVAVNHFKSKGS 624 Query: 167 FC--FLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-- 221 C D N +C+ ++ AQ + W+ + P ++ GD N Y N Sbjct: 625 NCDSLGDPNLNDGQGNCNVTRTRAAQAVGTWLAA-EYPQAPVLLIGDLN---AYAQENPL 680 Query: 222 --------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--------YFVMDQN 265 + + +D + + + L N ID + D+ Sbjct: 681 TALKDAGFTELFDHLDKVGAYSYVFSGETG--QLDHALANSELIDSVVDVTEWHINTDEP 738 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E F E+ R SDH P+ + Sbjct: 739 -RILDYNEEFKSASQIENLYSDSAYRSSDHDPVVVSL 774 >gi|307546855|ref|YP_003899334.1| hypothetical protein HELO_4265 [Halomonas elongata DSM 2581] gi|307218879|emb|CBV44149.1| K06896 [Halomonas elongata DSM 2581] Length = 273 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 77/238 (32%), Gaps = 49/238 (20%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ + + + + ++ H + + + N + + Sbjct: 66 DVVGLQEVDGGSFRSSRVNQVEY---LASRAGFPH--HFQQLNRNLGQLAQHSNGLLSRL 120 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 S + R A+ + + HL +L + + Sbjct: 121 SPQSIEEHSLPGPMPGRGAIHARFGDGPDALHLFVAHL-------ALSHRARV------R 167 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT--IDPNDSLIRFPKEKDSR 244 Q +L + + + L V+ GD N + L ++ F K+ + P + +P Sbjct: 168 QLDYLSELV----QPLRHVVVMGDLNCTPDQLHAHERFRKSLPLHPVRPPLSYP------ 217 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + +D+ ++ + D ++ SDH P++ID Sbjct: 218 -----SWQPRRALDHILLSDS--------------LQADRVEVLEHLFSDHLPVAIDI 256 >gi|302557371|ref|ZP_07309713.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] gi|302474989|gb|EFL38082.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] Length = 259 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 89/307 (28%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE AKV Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQE-------AKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 38 ---AEDQFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + ++ Y Q + L ++ Sbjct: 94 A-----IAATCGPVRVWSVYVPNGREVEHPHYAYK------LQWFEALTAAVSGDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------------ 245 PF + GD+N +DD + S P E+ + Sbjct: 143 PFAVLGDYN----VAPTDDDVYDRSAFEGSTHVTPAERAALASLREAGLSDVVPRPLKYE 198 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + ID V + + +S+ D + +GK SDH Sbjct: 199 HPYTYWDYRQLCFPKNRGMRID-LVYGNAPFAKAVTDSY------VDREERKGKGASDHA 251 Query: 297 PISIDYD 303 P+ +D D Sbjct: 252 PVVVDLD 258 >gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] Length = 788 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 99/317 (31%), Gaps = 55/317 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIA----- 115 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V+ V L + +S R+ + G+ + V+ HL S + Sbjct: 599 VKLAVVPKLLDKNVVRIGDESSLFESTRKPLAAEFTFQGQNVVVVANHLNSKIGDATPFG 658 Query: 176 TYSPSCSLLSQQ------AQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 P +L + AQ + ++ QKK + P V+ GD N + + Sbjct: 659 KVQP--LVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-EG 714 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 715 TNLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMK 767 Query: 288 RGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 768 EHGRVSDHDPVLAQIDL 784 >gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] gi|332381313|gb|AEE66160.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis CS] Length = 286 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 24/152 (15%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 L D+VFLQE+ N V+ V S + N I T + Sbjct: 34 LRPDLVFLQEVQGRNEVSSVLHAQ----HESLAAALRLQAAYGRNAIRTG----TDHGNA 85 Query: 124 LQQSYPLLGAKDSFS---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 L + +L ++ R R + +++ G ++ +HL F S Sbjct: 86 LLSRFDILDHENQDISDHRLEQRGLLHARIDVGGTEVHCFVVHL--GLFAGSRG------ 137 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q Q L D I Q P +I GDFN Sbjct: 138 -----RQIQALTDRIRQSVPDGAPLLIVGDFN 164 >gi|325121513|gb|ADY81036.1| putative extracellular nuclease [Acinetobacter calcoaceticus PHEA-2] Length = 812 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNL---DADIVFLQEMGS 76 A +R+ S+N+ + T +++ R+ L DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + + W + + R + I AI K V+ L + Sbjct: 520 NGYGPNSAIAHLTSALGSDWKYV-----VPENLDRLGGDAIAVAIIYNSKRVKPLNKPV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C +T + C Sbjct: 574 ---VLDLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSTDADQKDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N +++ N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEEPILSFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D Y ++ + + + YNE Sbjct: 691 GTQAYSYVFGVASDANGNGGAGN---LDHAIADAALYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 778 >gi|269929041|ref|YP_003321362.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] gi|269788398|gb|ACZ40540.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] Length = 635 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 60/292 (20%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 V + + ++++NI + L + + + D+V LQE Sbjct: 399 VTAGPPLGPDITVITYNIQNGFSIDNYFA-----------LDALARTIEEVHPDVVVLQE 447 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLL 131 + V+ + W +S + + + +D A+ R + V + Y Sbjct: 448 VSRGWLVSSGVDELRW---FSHRLGMPYVFGTNADDGIWGNAILTRAPILEVAHRQY--- 501 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + ++ R + + + +WV HL + + + + Q L Sbjct: 502 ----TTTQNLKRGVIGVRLATERGDLWVFGTHL----------DDPTEAGQVRMTQVTEL 547 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D+ + P ++ GD N + + + + + + +++ Sbjct: 548 IDFWGGRT----PALLLGDLN-----AEPDSEVLQALAEAGFVDLG-EVLGPEAWTSEDH 597 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 R IDY + DI+ R SDH P+ Sbjct: 598 RR---IDYILATTGIELR--------------DIEILDSRASDHRPVVARLT 632 >gi|293339926|ref|XP_002724704.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus] gi|293351345|ref|XP_002727798.1| PREDICTED: rCG35247-like isoform 3 [Rattus norvegicus] Length = 363 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 96/314 (30%), Gaps = 66/314 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN-- 78 A +R+ ++N+ + + + SV +L Y DI +QE+ + Sbjct: 81 ATALRIGAFNVQSFGDHKASDPDCGSVI-----AQILAGY------DIALVQEVRDPDLS 129 Query: 79 AVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLL 131 AV+ + K+ + S RD +++ RK V V+ YP Sbjct: 130 AVSLLMEQINSVSKHEYGFVSSK-----PLGRDQYKEMYL-FVYRKDVVSVVSTYQYPDP 183 Query: 132 ----------------GAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLD 171 G + + L + K++ ++ +H Sbjct: 184 EDAFSREPFVVKFSAPGCGELIPPPPPSYRLSLTLTSPLSTAAKELVLIPLH-----AAP 238 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + + + W + + GDFN Y+ +D + + Sbjct: 239 NQAVAEIDALYDVY--LDVIDKW------NTDDMLFLGDFNADCKYVKAHDWPSIRLRSS 290 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGK 290 + N + D V+ K + +S S + E+ + + Sbjct: 291 QVFKWLIPDSADTTVGNSDCAY----DRIVVSGAHMRKSVKPQSASVHNFQEEFDLDQTQ 346 Query: 291 RL--SDHCPISIDY 302 L SDH P+ + + Sbjct: 347 ALAISDHFPVEVTF 360 >gi|196046040|ref|ZP_03113268.1| putative secreted protein [Bacillus cereus 03BB108] gi|196023095|gb|EDX61774.1| putative secreted protein [Bacillus cereus 03BB108] Length = 264 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 95/301 (31%), Gaps = 66/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI E + + + + +++ I+ LQE+ S + Sbjct: 8 LRIATFNI-W--NHESLWFER---------LEAICEEIRSISPHILALQEVRSSVNL--- 52 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK--------- 134 + + I + K+ + L Sbjct: 53 -------------NSKKNVAQYIAGRIGYPFCIFKEYPDSPDEGLAFLSKIPIIAEEAIW 99 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 ++ N A+ + G K V ++HL S + +Q + +W Sbjct: 100 ETDIEESNYCAIRITFTYKGCKFGVTNVHL------------NWKSSRIRQEQMNTVNNW 147 Query: 195 ITQKKESLVPFVIAGDFN-------RKINYLGNNDDF----WKTIDPNDSLIRFPKEKDS 243 I + ++ GDFN + YL +K I+ N + Sbjct: 148 IENRASDYE--LLCGDFNDDPFSMVHQ--YLIRKHWIDVAQFKEIEENMIAQ-PTLDYRK 202 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +++ + D+ ++ +NA F + ++ E + S G SDH + +D Sbjct: 203 NPNLKDDVKQEKRYDWIMIQENA-AFEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLK 261 Query: 304 F 304 F Sbjct: 262 F 262 >gi|308806584|ref|XP_003080603.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] gi|116059064|emb|CAL54771.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] Length = 546 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 108/302 (35%), Gaps = 42/302 (13%) Query: 19 SVAQKVRLVSWNINTL----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + ++R+ ++N L S+ ++ + + +DAD+V L E Sbjct: 40 AGSARLRVGAFNARWLFDGVSDVSASPYANGEANAAREHGRMVNEVIRAIDADVVVLTET 99 Query: 75 GSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + A+ N + +++ + V + R + Y Sbjct: 100 ETCETLDWAREGTPNVARALV--KGTDTATQQQIGILSKISF-VEEPWRREDRADYDAAT 156 Query: 133 AKDSFSRAGN----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + +S + N + AV ++ + + ++ HLK+ T S SC+ QA Sbjct: 157 SACGYSGSKNSGVSKHAVA-RFKVGARTVALIGAHLKA-------NPTQSSSCAQREAQA 208 Query: 189 QWLKDWITQKKESLVPFVIAGDFN--RKINYLGNND-------DFWKTIDPNDSLIRFPK 239 + L+ ++ E+ ++AGD N ++ N+ + ++ + Sbjct: 209 EVLRSIARERFEAGDAVIVAGDLNDYSDLHVDAGNNSPTSRVLRMLRDLNNDGVDELQEV 268 Query: 240 EKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + R +K +DY ++ ++ + + + D+ +SDH Sbjct: 269 GELVAVSDRYTWRSGSSKAKLDYILVSRSDFDLVSAS-------IQHDL--VNASVSDHF 319 Query: 297 PI 298 P+ Sbjct: 320 PL 321 >gi|118477610|ref|YP_894761.1| hypothetical protein BALH_1938 [Bacillus thuringiensis str. Al Hakam] gi|118416835|gb|ABK85254.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 264 Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 100/299 (33%), Gaps = 62/299 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76 +R+ ++NI E + + + + +++ I+ LQE+ S Sbjct: 8 LRIATFNI-W--NHESLWFER---------LEAICEEIRSISPHILALQEVRSSVNLNSK 55 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 N + + + ++ + +A K + +++ ++S Sbjct: 56 KNVAQYIAGQIGYPFCI---------FKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEES 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A+ + G K V ++HL S + +Q + +WI Sbjct: 107 NYC-----AIRITFTYKGCKFGVTNVHL------------NWKSSRIRQEQMNTVNNWIE 149 Query: 197 QKKESLVPFVIAGDFN-------RKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRC 245 + ++ GDFN + YL +K I+ N + Sbjct: 150 NRASDYE--LLCGDFNDDPFSMVHQ--YLIRKHWIDVAQFKEIEENMIAQ-PTLDYRKNP 204 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N +++ + D+ ++ +NA F + ++ E + S G SDH + +D F Sbjct: 205 NLKDDVKQEKRYDWIMIQENA-AFEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262 >gi|332374334|gb|AEE62308.1| unknown [Dendroctonus ponderosae] Length = 410 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 100/300 (33%), Gaps = 40/300 (13%) Query: 18 ASVAQKVRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + +RL WNI L ++ + ++ Y ++ + + D++ LQE Sbjct: 104 TTSPHSLRLFQWNILSQALGKENDNFARCPEEALDWNHRKYLIVEEIIE-YCPDVICLQE 162 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLL 131 + ++ + V + + + N+ A+ R +L+ +L Sbjct: 163 VDHFHFLKHVLETQGYTGMFFPKPDS-PCFYIDGNNGPDGCAIFFRTDKFELLRAETRIL 221 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL-SQQAQW 190 S + L V+ G++I V+ HLK+ S + L ++Q + Sbjct: 222 EIWRIQSNQVA-LLMILKVKQTGQEICVVTTHLKA---------RRSALLATLRNEQGKD 271 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSR 244 L +++ Q P +++GDFN + LG+ P +K Sbjct: 272 LLEFVRQ-NCGDRPTILSGDFNAEPAEPIYGTVLGSGQHLASAYAECAGNGWIPSDKREP 330 Query: 245 CNANKNLRNK------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL---SDH 295 + + IDY L + E+ +D R L SDH Sbjct: 331 --PYTTWKIRDEGEVCHTIDYIFYS---KNKLDVDGVLELPTEKDIGPDRVPSLRYPSDH 385 >gi|298244699|ref|ZP_06968505.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] gi|297552180|gb|EFH86045.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] Length = 343 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 81/295 (27%), Gaps = 83/295 (28%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYN 78 + + ++WN + + G +RQ D++ LQE + Sbjct: 105 GRTITAMTWNFLGDNTRGGY----------------VRQLINTHHPDLIALQEADWNGID 148 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + + ++ S E VL + P+L + Sbjct: 149 EAQDILRQYPYHLYGSGEAPPGE---------------------VLLSTLPILDHGQVTA 187 Query: 139 RAGNRRAVELL------VEIN-GKKIWVLDIHLKS------FCFLDSLENTYSPSCSLLS 185 G+R ++ +++ G+ + V++ H S C Sbjct: 188 PDGSRSVWDIPRILWARLDLGHGQTLLVVNAHPISSINTVYGCLFCPQRRDS-------- 239 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFPKEKDS 243 Q + L ++ + ++ GD N + + ++ + D+ + K Sbjct: 240 -QVKALHQFLQPFIQHGERLLMLGDMN-----TTDREPAYQDLSAGLQDTHLLVGKGSGH 293 Query: 244 RCNANKNLRNKIP--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + IDY + + R SDHC Sbjct: 294 SWGIRGLNQYWAFLRIDYMFVTPKVKPLNLDT-------------DCTSRGSDHC 335 >gi|294055186|ref|YP_003548844.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614519|gb|ADE54674.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 261 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 91/296 (30%), Gaps = 51/296 (17%) Query: 21 AQKVRLVSWNINT---LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R ++ NI LS +G+ ++++R + + + D+V +QE+ Sbjct: 3 GRALRFLTLNIAHGRGLSLYQGLH-RASTIERN---LQRIVRLLEREQPDVVAMQEVDGS 58 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAK 134 + K + + ++ +A + P A Sbjct: 59 SHWNKHIN----LLEFLAREAGYAYHHLGVHNRRLGKLPLAYGNALLSRYPIENPDTQAF 114 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + G + + + + + V+++HL D Q + L + Sbjct: 115 G-SAELGEKGFLYSELRLPAGHLPVVNLHL------DFRSRQRRLD------QVERLIGY 161 Query: 195 ITQ--KKESLVPF---VIAGDFNRKIN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + +++ + +I GDFN ++ + + P + + Sbjct: 162 LEARHREKGGETYFSPIICGDFNSSATKQRDAVKHLIGYLEGHCAYQLLPSGGKT--FPS 219 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ + S + +KS +SDH P+ D + Sbjct: 220 ILPM--QSLDFIFV---------PPSHEVR--RCEVLKSY---VSDHRPVVADLEL 259 >gi|309366995|emb|CAP20464.2| hypothetical protein CBG_23668 [Caenorhabditis briggsae AF16] Length = 439 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 88/330 (26%), Gaps = 65/330 (19%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + F + +++R+V+ N Q + V R + +Y + Sbjct: 22 EPVIRRESFAALRRNNVAPRQLRIVTLN-AWCLPQPWPIGSTDRVHR----LQKIGEYMR 76 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RK 118 N DIV LQE+ SYN + S + + + T V R Sbjct: 77 NETYDIVGLQELWSYNDFVR----------LSEQVKDAYPYFHYFHSGFTGSGVCVFSRH 126 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLE 174 V L Y L G R + + ++ HL + E Sbjct: 127 PIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHA-------E 179 Query: 175 NTYSPSCSLLSQ--QAQWLKDWITQKKESLVPFVIAGDFN-------------------- 212 L + Q+ L ++ ++ GD N Sbjct: 180 YDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDA 239 Query: 213 ----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQN 265 ++ +D + + ++ C + K LR K IDY + Sbjct: 240 WRMSHEVETTDGDDG--ELLKFRGIAKGGTCDRPDNCYSKKALREKDDSKRIDYMLFKSG 297 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 E + I SDH Sbjct: 298 RCNVK----LEECEITLNQIPGEDLNYSDH 323 >gi|302555181|ref|ZP_07307523.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] gi|302472799|gb|EFL35892.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] Length = 259 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 86/300 (28%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE + Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQE---AKVAEEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP R + + +AV + L G R Sbjct: 42 FPSEQL-------RELGYESAVHATGRWNGVAVLSRVGIEDVVKG-LPGDPGFDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + LK + Sbjct: 94 A-----ISATCGPLRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------NANKNL 251 PF + GD+N +DD + DS P E+ + K Sbjct: 143 PFAVMGDYN----VAPTDDDVFDPAAFADSTHVTPAERAALASLREAGLSDVVPRPLKYE 198 Query: 252 RNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 DY + I ++ + + + R SDH P+ +D D Sbjct: 199 HPFTYWDYRQLCFPKNRGMRIDLVYANEPFTKAVEDAYVDREERKGKGASDHAPVVVDLD 258 >gi|21231641|ref|NP_637558.1| hypothetical protein XCC2202 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768237|ref|YP_242999.1| hypothetical protein XC_1916 [Xanthomonas campestris pv. campestris str. 8004] gi|21113335|gb|AAM41482.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573569|gb|AAY48979.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 253 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 77/269 (28%), Gaps = 44/269 (16%) Query: 48 KRTTSDYTLLRQYAKN----LDADIVFLQEM--------GSYNAVAKVFPKNTWCIFYST 95 D+ R Y L D++ LQE+ +A F S Sbjct: 9 HHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYAY--TFASV 66 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + + N + ++S + R A L V+++G+ Sbjct: 67 DPPGAPKRY--------------GNALLSKRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQ 112 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + V HL + + + +Q L D+I + P VIAGDFN Sbjct: 113 PVNVYVTHL------NERSDARGAATRT--RQVADLLDFIAS-NSNQAPVVIAGDFN-TA 162 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 + + K + + + ID+ QN Sbjct: 163 ADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARIL 222 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y + G+ SDH + + F Sbjct: 223 FDTPY------AEGRWASDHYGVWVRLQF 245 >gi|323213902|gb|EFZ98672.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 191 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 31/166 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + + + + + Sbjct: 33 LRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 H AV R + + G++ R + + + + I V+ +HL Sbjct: 93 HHGNAVLSRYPIEHYENRDVSVGGSEK-------RGVLYCRITPPMLNRPIHVMCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L ++ + Q L W+ P ++AGDFN Sbjct: 144 -----GLRESHRQA------QLTMLAGWVNAL-PESEPVLVAGDFN 177 >gi|291234351|ref|XP_002737114.1| PREDICTED: deoxyribonuclease I-like [Saccoglossus kowalevskii] Length = 472 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 53/310 (17%) Query: 5 YVLALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 Y+L L+ + + + ++N+ ++ S + +L Q Sbjct: 25 YLLILISCCFAPNLVCGEIDDLYIAAFNVE---------MFGQSKMSDSDVVDVLTQIVH 75 Query: 63 NLDADIVFLQEMGSYNAVAKV--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 DI+ +QE+ A + + + I S N R S+ + + A Sbjct: 76 RY--DIILIQEIRDIAGTAILDLLSEVNSVSDSEYLIATS-----NRLGRSSSKEQY-AF 127 Query: 115 AVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 R V + Y + K R + V + ++ IH+K Sbjct: 128 LYRSDKVTITDTYHYDDVDDKFEREPFIVRVSSASTVITDFA---MVAIHVK-------P 177 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +LL + W +L +I GDFN +Y+ + D+ + ++ Sbjct: 178 SDAVQEIDTLLDVYDDTVTRW------NLEDVIILGDFNAGCDYVTSWDNI--RLRTDNR 229 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRGKR- 291 ++ R P D V+ + S +++ S + Sbjct: 230 FTWLISDRAD----TTVSRLNCPYDRIVVAGATMLQSVWPGSSDVFYFDQAYGLSYDQTN 285 Query: 292 -LSDHCPISI 300 +SDH P+ + Sbjct: 286 DVSDHYPVEL 295 >gi|223936857|ref|ZP_03628766.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223894426|gb|EEF60878.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 273 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 98/299 (32%), Gaps = 55/299 (18%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 L A R++++NI+ G L K D + K ADIV Sbjct: 22 FVLLTNLQAESTNTFRVMTYNIHH-----GEGLDK------QVDLQRIADLIKQEKADIV 70 Query: 70 FLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQ 126 LQE+ + + FP + + + + TAI R + Sbjct: 71 ALQEVDRNTERTGKRDFPAEFTR--LTGMSCVFSNNWPVQGGEYGTAILTRFPITKREHS 128 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 ++G+K+ R ++ V++ +++ V++ H+ T + + Sbjct: 129 LLKMVGSKEQ------RGLLQAHVKMGDREVVVMNTHV-------DHRKTDEERLESIME 175 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-NDSLIRFPKEKDSRC 245 A + KK++ +P + GDFN ++ + D + E + Sbjct: 176 FATVI------KKKAELPVIFCGDFN-----DVPGSPTYEQMSALLDDSWKLIGEGEGWT 224 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R + IDY + + + + SDH P+ +++ Sbjct: 225 IPAEKPRRR--IDYIWISKKGPII----PLRAWVPASEA--------SDHRPLVVEFQL 269 >gi|255264183|ref|ZP_05343525.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] gi|255106518|gb|EET49192.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] Length = 341 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 109/343 (31%), Gaps = 64/343 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR--------TTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ S + R + + Q + LDAD V + E Sbjct: 1 MRIATYNVEWFSNLFDGVGEMLADDRWSGRRDVTRSQQLAAVGQVFQALDADAVMIIEAP 60 Query: 76 SYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 +A + T+ + + + ++ + +K Sbjct: 61 DSHAKRDGLAALETFAAHFGLRASKAMTGFVNETQQEISLLYDPTQLSATHDPIGDESSK 120 Query: 135 DSF---SRAGNRRAVELLVEINGKKIWV----LDIHLKS---------FCFLDSLENTYS 178 R + ++L V+ ++ L++ LKS S + Sbjct: 121 AGSGDAPRFDSVFRIDLNVDRAPDQVRFSKPPLEVELKSKSGRVVRLIGVHAKSKAPHGA 180 Query: 179 PSCSLLSQ-----------QAQWLKDWITQKKESLVPFVIAGDFNRKINY---------- 217 + + + Q Q W++ + Q + ++ GDFN Sbjct: 181 KNAAKVMQISIANRRKQLAQCIWIRQRVDQHLDRKDSVIVLGDFNDGPGLDSYEKLFGRS 240 Query: 218 -----LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFVMDQN-- 265 LG +D + DP+ + + + ++ LR+ +DY ++ + Sbjct: 241 GVEIVLGEDDPV-QLFDPHAKMALTQRIGAAPTSSRFFLRHENRYLSALLDYIMVSPDLA 299 Query: 266 --AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 A + I F + D++ R L SDH P+++D + Sbjct: 300 ELAPSWHIWHPFED-PACWGDVELRDALLTASDHFPVTLDIEL 341 >gi|149197514|ref|ZP_01874565.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155] gi|149139532|gb|EDM27934.1| hypothetical protein LNTAR_00995 [Lentisphaera araneosa HTCC2155] Length = 266 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 100/317 (31%), Gaps = 76/317 (23%) Query: 2 IRKYVLALVFFLVPC--TASVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLR 58 ++K L L + S+ +VR+ ++N+ LS + Sbjct: 1 MKKLSLFLFILTTSFLISQSLNAQVRVAAYNVLYGLSGSP----------------EQIG 44 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + D++ E+ + + A+V + ++ NH D + +I Sbjct: 45 AMFRPYNLDMIGFNEVPNGDWTARVGKVLGMKY-VYVGKISSANHK------DKYKSILS 97 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + + L + +++ A AV EI G KI + +H+ C Sbjct: 98 RTPLKNTEEVA---LQGEHAWNPAS---AVYADTEIRGVKIRLYSLHV---CQA------ 142 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-------DFWKTID 229 L L++ K++ ++ GDFN KI WK ++ Sbjct: 143 -----RNLKSHIDRLREKYLSKEKKK-NIIVLGDFNDKIESPALTRLQEAGFHACWKDLN 196 Query: 230 PN--DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 N + P S ID+ + K E I Sbjct: 197 MNLEKAFTWNPNNPKSGLKEG-------VIDHIFYKSKSAKASKAE-----------IIE 238 Query: 288 RGKRLSDHCPISIDYDF 304 LSDH P+ + DF Sbjct: 239 LQPPLSDHKPVWAEIDF 255 >gi|17510359|ref|NP_493461.1| hypothetical protein Y63D3A.4 [Caenorhabditis elegans] gi|75028976|sp|Q9XWG3|TDP2_CAEEL RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase gi|3881233|emb|CAA21707.1| C. elegans protein Y63D3A.4, confirmed by transcript evidence [Caenorhabditis elegans] Length = 362 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 37/149 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +V ++SWNI+ L + ++ K + KN++ DI+FLQE+ + Sbjct: 119 EVSVMSWNIDGLDGRSLLTRMK-----------AVAHIVKNVNPDILFLQEVVDRDLA-- 165 Query: 83 VFPKNT----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 P + + I+YS + +TAI V K F Sbjct: 166 --PIDKLQSLYKIYYSNKGC----------QYYTAILVSKMFDVEKHD-------VIHFQ 206 Query: 139 RAGNRRAVELLV-EINGKKIWVLDIHLKS 166 +G R +++L I G K+++L+ HL+S Sbjct: 207 NSGMYRTLQILEGSIGGLKVFLLNTHLES 235 >gi|262202977|ref|YP_003274185.1| endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM 43247] gi|262086324|gb|ACY22292.1| Endonuclease/exonuclease/phosphatase [Gordonia bronchialis DSM 43247] Length = 314 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 85/255 (33%), Gaps = 52/255 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 +D L + + AD++ LQE+ + A+A++ + R Sbjct: 106 EADTEALAELVDSSHADLLSLQEV-TPEALARI-----------------RAGRIVARLP 147 Query: 111 HT-AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--F 167 H AI V + L + PL+GA A R + VL IH ++ Sbjct: 148 HVYAIPVSQTGGTALLSAQPLVGAAPVPGTAD-RMLSAVTDLPGAPGTRVLAIHPRAPLG 206 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 F+ S ++ + L D++ + V AGDFN + + T Sbjct: 207 GFVTSWDSD-----------LRALGDYL--RSTPQQRVVAAGDFN--ATWDSSRYRALLT 251 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 D+ + AN++ R I +D+ + A L + DI Sbjct: 252 DGFADAAEQIGAGFSPTFPANRSRRPFITLDHVITRGFAAASL----------STHDIPG 301 Query: 288 RGKRLSDHCPISIDY 302 SDH + + Sbjct: 302 -----SDHRAVVVTL 311 >gi|298504828|gb|ADI83551.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens KN400] Length = 335 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 114/342 (33%), Gaps = 79/342 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 V++ SWN+ L + + +R D + + + L DI+ L E + A Sbjct: 2 GTVKITSWNVAHL--ERLTRAHPTAKERRRRD--AVVREIRELAPDILCLLEGPAGEAGI 57 Query: 82 KVFPKN----TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + W + + + D VR+ + S +G D+F Sbjct: 58 DLVANDLLDGEWVAVKAAD-----GNYATRGDQWIWFLVRQDLA--DRASLLPVGTWDTF 110 Query: 138 S----------------RAGNRRAVELLVEINGKKIWVLDIHLKS-------FCFLDSLE 174 + R L+++ NG ++ + +HLKS + D E Sbjct: 111 AGVSWTCHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERE 170 Query: 175 NTYSPSCS---LLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKT-- 227 + + ++ +A ++ +I ++ + GDFN G ++++ Sbjct: 171 RFIREALTARIKMATEAVNVRAYIDAKFRQVGNPALFVLGDFN-----DGPGKEYFEEQY 225 Query: 228 ------IDPNDSLIRFPKEKDSR--------CN-------ANKNLRNKIPIDYFVMDQNA 266 + ++ + + C + R +I +D+ + Q Sbjct: 226 LFFDLIANIQGNVFATSRFLNHGLFDIPDELCWTVRFRDFVQPDRRPEILLDHILFTQGL 285 Query: 267 YK----FLIQESFSEILYNEDDI----KSRGKRLSDHCPISI 300 + ++ ++ + ++ + + SDH P+S+ Sbjct: 286 VNGSLPWQVKPHAGKVEHEVHELVNAGLPKDSQTSDHRPVSL 327 >gi|209559126|ref|YP_002285598.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes NZ131] gi|209540327|gb|ACI60903.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes NZ131] Length = 910 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|148675569|gb|EDL07516.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_d [Mus musculus] Length = 530 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 102/344 (29%), Gaps = 87/344 (25%) Query: 17 TASVAQKVRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 T + +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 TVPFTKMLRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQET- 55 Query: 76 SYNAVAKVFPKNTWCIF--------------YSTERLINHSKRDSNNDIHTAIAVRKKNV 121 V + + YS + D T +A + Sbjct: 56 --KVTRDVLTEPLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLS 113 Query: 122 RV---LQQSYPLLGAKDSFSRAGNRR----AVEL-------LVEINGKKIWVLDIHLKSF 167 V L G D F++ R L +E K + +++++ Sbjct: 114 GVFATLNGDIGCYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVY---- 169 Query: 168 CFLDSLENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGN--- 220 C + P + + L+ + +I GD N R I++ Sbjct: 170 C---PHADPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSL 226 Query: 221 --------NDDFWKTIDPNDS-------------LIRFPKEKDS-RCN----ANKNLRNK 254 + PK++ + C ++L Sbjct: 227 ECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYG 286 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +DY + D+ Q SF SDHCP+ Sbjct: 287 SRLDYVLGDRALVIDTFQASF----------LLPEVMGSDHCPV 320 >gi|83942866|ref|ZP_00955326.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] gi|83845874|gb|EAP83751.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] Length = 341 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 98/343 (28%), Gaps = 68/343 (19%) Query: 24 VRLVSWNINTLSEQEGVSLW---------KNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ ++N+ + ++++ R L + +DAD V + E Sbjct: 1 MRIATYNVEWFTGLFDDEDQLLLDDGWSARHNITRAQQA-QALGTVFRAMDADAVMVIEA 59 Query: 75 -------GSYNAVAK------------VFP---KNTWCIFYSTERLINHSKRDSNNDIHT 112 G+ A+ + V I + + + Sbjct: 60 PDQSRKRGTVAALERFAAHFDLRTRKAVIGFANDTQQEIALLLDPDRLSASHAPGGSVGQ 119 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A R + FS+ +++ V G ++ HLKS Sbjct: 120 GDAPRFDGTLDIDLDIDAREDHVVFSKPPLE--LDI-VTCEGVAFHMIGAHLKS--KAPH 174 Query: 173 LENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 T + + QA WL+ I + + P ++ GD N D F Sbjct: 175 GAKTPQDALRIGIANRRKQLAQAIWLRRRIDARLDDGTPLMVLGDLNDGPGLDSFEDLFG 234 Query: 226 KTIDP------NDSLIRFPKE------------KDSRCNANKNLRN-KIPIDYFVMDQNA 266 ++ D + P SR R + +DY ++ Sbjct: 235 RSSVEIVMGHRQDRALVDPHAIRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMISPAL 294 Query: 267 YK----FLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYDF 304 + I + + + ++ SDH P++ID D Sbjct: 295 TAHRPHWRIWHPLDDPECWGDAALRDALITASDHFPVTIDLDL 337 >gi|56807877|ref|ZP_00365710.1| COG2374: Predicted extracellular nuclease [Streptococcus pyogenes M49 591] Length = 846 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 484 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 537 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 538 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 596 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 597 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 656 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 657 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGTKHQANIVMLGDFNDFEFTKTI-- 713 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 714 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 766 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 767 SPFMEAHGRASDHDPLLLQLSF 788 >gi|21910025|ref|NP_664293.1| hypothetical protein SpyM3_0489 [Streptococcus pyogenes MGAS315] gi|28896277|ref|NP_802627.1| hypothetical protein SPs1365 [Streptococcus pyogenes SSI-1] gi|21904215|gb|AAM79096.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811528|dbj|BAC64460.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 910 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNVAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|325293099|ref|YP_004278963.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] gi|325060952|gb|ADY64643.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] Length = 265 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 93/308 (30%), Gaps = 74/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ DIV LQE+ S Sbjct: 1 MKIATWNIN------------GVKAR----IENLCQWLKDSSPDIVCLQEIKS------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + +A + K + P A + Sbjct: 38 VDEGFPRLEL---EALGYHVETHGQKGFNGVALLSKMKPDEINHGLPGDDADEQ-----A 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E + ++G I V ++L + + + L+ + L+ + + Sbjct: 90 RF-IEGVFSVDGGAIRVCSLYLPNG----NPPDDPVKYPYKLAW-MERLRRFAEDRLALE 143 Query: 203 VPFVIAGDFNRKINYLGNNDD-FWK----------------TIDPNDSLIRFPKEKD--- 242 P ++AGD+N +D W R ++ Sbjct: 144 EPLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSAFRRLENLGFTDAARATTDEPGLY 203 Query: 243 ------SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N I ID+ ++ A L S + + ++ SDH Sbjct: 204 SFWDYQAGAWPK---NNGIRIDHLMLSAEAADRLESVSIEKHV-------RAWEKPSDHV 253 Query: 297 PISIDYDF 304 P+ ++F Sbjct: 254 PVCGYFNF 261 >gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 788 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKLGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNAVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|257125417|ref|YP_003163531.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257049356|gb|ACV38540.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 248 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 99/269 (36%), Gaps = 46/269 (17%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF--YS 94 + + + R+ + ++ DIV L E+ +++ +N + + Sbjct: 17 NQPFKHMRGYLGRSVRHIYRIGKFINKYKPDIVGLVEVD--LGSFRMYSRNQATLLGRIT 74 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + K + +++ VRK+ +L + P+L + + G ++ L++E+ Sbjct: 75 RNNNVYQYKYEEDSNYMKFPMVRKQGNALLSKK-PVLREEFHYLDIGMKK---LIIEVET 130 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + V +HL +Q L +++ P ++AGDFN Sbjct: 131 EDVVVFLVHLALGG-------------KTRQKQIVQLYNFVK---NCKKPVIVAGDFN-- 172 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + + + +R + + N + + +D+ + K + +S Sbjct: 173 VFWGEEEIEMFLQASN----LRNINIRKDPTFPSWNPKRE--LDFILCS----KEIKVKS 222 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + I +LSDH PI +D++ Sbjct: 223 YEVI----------QTQLSDHLPILVDFE 241 >gi|32472920|ref|NP_865914.1| hypothetical protein RB4127 [Rhodopirellula baltica SH 1] gi|32444157|emb|CAD73600.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 279 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 85/246 (34%), Gaps = 37/246 (15%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + ++++ D+V LQE+ + + + + L+ H Sbjct: 63 DLERIAKVIQSVEPDLVTLQEVDQNASRSGSVDQPAELARLTG-MLVAFGPNIPLQGGHY 121 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 AV K + LL D+ + G A EL + + + +L HL DS Sbjct: 122 GNAVLSKYP-IANHRNELLPNFDNGEQRGVLSA-ELTISGRNQPLLLLATHL------DS 173 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + A+ + ++ + P ++AGD N +N T+D + Sbjct: 174 RRDDRER-----LASAKAINQIVS--ESPRRPALLAGDMNDVLNSP--------TLDELE 218 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++ E+ N R + ID+ + + LI + +E Sbjct: 219 TMWTRVNEQVMPTTPVANPRRQ--IDFILFRPSNSWKLI----EVKVLDEAVA------- 265 Query: 293 SDHCPI 298 SDH PI Sbjct: 266 SDHRPI 271 >gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 792 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 102/318 (32%), Gaps = 57/318 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 493 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 543 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 544 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 602 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G + S + R+ + G+ + V+ HL S + Sbjct: 603 VKLAAVPKLLDKNVVRIGDESSLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 661 Query: 175 NTYSPSCSLLSQQ------AQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 P +L + AQ + ++ QKK + P V+ GD N + + Sbjct: 662 GKVQP--LVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-E 717 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 718 GTNLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIM 770 Query: 287 SRGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 771 KEHGRVSDHDPVLAQIDL 788 >gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 788 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 102/318 (32%), Gaps = 57/318 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G + S + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDESSLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQ------AQWLKDWIT--QKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 P +L + AQ + ++ QKK + P V+ GD N + + Sbjct: 658 GKVQP--LVLKSEDKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-E 713 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 714 GTNLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIM 766 Query: 287 SRGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 767 KEHGRVSDHDPVLAQIDL 784 >gi|156934720|ref|YP_001438636.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894] gi|156532974|gb|ABU77800.1| hypothetical protein ESA_02555 [Cronobacter sakazakii ATCC BAA-894] Length = 253 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 39/254 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + +++ + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV + + + + R + K I V+ +HL Sbjct: 93 HHGNAVLSRYP-IEHYENRDVSVPGTEKRGVLH--CRITPPGFPKAIHVICVHL------ 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L+ + + Q L + + P V+AGDFN ++ + + Sbjct: 144 -GLKEAHRQA------QLTMLAELVNSL-PEGEPVVVAGDFN---DWRQQANRILRNEAG 192 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 D + + +R + +D + + + Sbjct: 193 LDEVFTRAHGRPARTFPVSFPLLR--LDRIYVKNASASAPTALPLRN-----------WR 239 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 240 HLSDHAPLAVEIHL 253 >gi|260888950|ref|ZP_05900213.1| hypothetical protein GCWU000323_00109 [Leptotrichia hofstadii F0254] gi|260861397|gb|EEX75897.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia hofstadii F0254] Length = 244 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 98/272 (36%), Gaps = 52/272 (19%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF--YS 94 + + + R+ + ++ DIV L E+ +++ KN + + Sbjct: 17 NQPFKHMRGYLGRSVRHVYRIGKFINKYKPDIVGLVEVD--LGSFRMYSKNQATLLGRIT 74 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + K + +++ VRK+ +L + P+L + + G ++ L++E+ Sbjct: 75 RNNNVYQYKYEEDSNYMKFPMVRKQGNAILSKK-PVLREEFHYLDIGMKK---LIIEVET 130 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + I V +HL +Q L +++ P ++AGDFN Sbjct: 131 EDIVVFLVHLALGG-------------KTRQKQIVQLYNFVK---NCKKPVIVAGDFN-- 172 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLI 271 FW + + ++ ++ + P +D+ + K + Sbjct: 173 --------VFWGE-EEIEMFLQASNLQNINIRKEPTFPSWNPKRELDFILCS----KEIK 219 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +S+ I +LSDH PI +D++ Sbjct: 220 VKSYEVI----------QTQLSDHLPILVDFE 241 >gi|226953375|ref|ZP_03823839.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] gi|226835913|gb|EEH68296.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] Length = 274 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 65/275 (23%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + + ER + Sbjct: 32 LLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFPAERAG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S D Sbjct: 81 AIYSRLPFVSVTNGLGFELADSQGRF-------ITAEFDLGLSHPVHIASLYLPSGSSGD 133 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RKINY 217 + L + A+ LK W ++ ++ GD+N +K + Sbjct: 134 EAQARKDI---FLEEYAKILKQW----RDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSG 186 Query: 218 LGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNK---------IPIDYFVMDQNAY 267 + ++ W I + +E N+ IDY + Sbjct: 187 VLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWK 246 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + +Y E SDH P+ IDY Sbjct: 247 ----ARTANAWVYKEQWF-------SDHAPVIIDY 270 >gi|193216364|ref|YP_001997563.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] gi|193089841|gb|ACF15116.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] Length = 413 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 104/348 (29%), Gaps = 88/348 (25%) Query: 3 RKYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +K ++ L S +Q + ++ ++N ++ S + + Y Sbjct: 4 KKILIFLCLTFFFPIVSFSQIRFKVATYN---------------CLQLDKSGFNSRKSYF 48 Query: 62 KNL----DADIVFLQEMGSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 K + + DI QE+ A + N I +S IN D+ + Sbjct: 49 KTIINEINPDIFLTQEIKEEAAADSLLSLLNETSISFSRAPYINGPDMDNM------LFY 102 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R V ++ Q + + R E +V+I + + HLK+ + Sbjct: 103 RDDVVSLISQ---------NTIQTSPRYLWEYVVKIGSDTLRIYSCHLKAS--------S 145 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINYLGNN----- 221 + L++++ + E+ F+I GD N + I NN Sbjct: 146 SESDEQTRLGEVTALRNYLNELPENSE-FIIVGDLNLYDNAEPAYQKLIADETNNIGRAK 204 Query: 222 DDF----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN----AYKFLIQE 273 D W S+ + D+ + QN + + + Sbjct: 205 DWLASGSWHNSSTYASIHTQSTRTTDLGDGGSTGGLDDRFDFILTSQNLNDASRIEYVAD 264 Query: 274 SFSEILYNED------------------DIKSRGKRLSDHCPISIDYD 303 S + D + R SDH P+ +++ Sbjct: 265 SM--TPFGNDGNLLNKDINNTANTAVSTSVADALWRASDHLPVIAEFE 310 >gi|294651921|ref|ZP_06729210.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] gi|292822153|gb|EFF81067.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] Length = 294 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 81/281 (28%), Gaps = 77/281 (27%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + + ER + Sbjct: 52 LLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFPAERAG-----------YAGT 100 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S D Sbjct: 101 AIYSRLPFVSVTNGLGFELADSQGRF-------ITAEFDLGLSHPVHIASLYLPSGSSGD 153 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKI-------------- 215 + L + A+ LK W ++ ++ GD+N K Sbjct: 154 EAQARKDV---FLEEYAKILKQW----RDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSG 206 Query: 216 NYLGNNDDF------------WKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ + P L + + N IDY Sbjct: 207 VLPHERSWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVG------WRIDYHA 260 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + +Y E SDH P+ IDY Sbjct: 261 CSPDWK----ARTANAWVYKEQWF-------SDHAPVIIDY 290 >gi|254251949|ref|ZP_04945267.1| Exonuclease III [Burkholderia dolosa AUO158] gi|124894558|gb|EAY68438.1| Exonuclease III [Burkholderia dolosa AUO158] Length = 281 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 83/303 (27%), Gaps = 68/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ ++ + + AD++ LQE+ Sbjct: 24 MKIATWNVNSLNVRK----------------QHVLDWLAQSGADVLCLQELK-------- 59 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + + + + + + +A+ +N + +S + Sbjct: 60 LPDEKYP--RADLEAVGYRSWFTGQKTYNGVAILARNTLTVDESDVVRNIPGFDDPQQRV 117 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 AV + + + ++ + + +DS + Y Q L W+ + + Sbjct: 118 VAVTV------EGVRIVSAYFPNGQAVDSDKFVYK------MQWLDALHAWLAAEMQRYP 165 Query: 204 PFVIAGDFNRKINYLGNNDDF-WKTIDPNDS------LIRFPKEKDSRC----NANKNLR 252 + GDFN +D W+ + K Sbjct: 166 KLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLIELGFVDAFRRFEQPEKTFT 225 Query: 253 NKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ ++ D ++ SDH P+ Sbjct: 226 WWDYRMFAFRRNAGLRIDHILLSPALADTCTSC-------VVDRAPRTWEQPSDHTPVVA 278 Query: 301 DYD 303 Sbjct: 279 TVS 281 >gi|72383653|ref|YP_293008.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] gi|72003503|gb|AAZ59305.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] Length = 275 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 83/312 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKV 83 + +WN+N++ + ++++ DI+ LQE ++ Sbjct: 3 VATWNVNSIRSR----------------IDHVKEWLITNKIDILCLQETKTEDKFFPIEI 46 Query: 84 FPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + S ++ N R NDI + Y L R Sbjct: 47 FSDLGYEVSISGQKSYNGVAIISRFPINDIKIGF-------NEVTNDYQDLSILSEQKR- 98 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + I ++++++ + ++S + Y + + L+ ++ + + Sbjct: 99 --------IISADINDIRIINVYVPNGSSINSDKFIYK------KKWLKCLQVYLREINK 144 Query: 201 SLVPFVIAGDFN-----RKINYLGN---------------NDDFWKTIDPNDSLIRFPKE 240 + P + GDFN R I+ D ++ + ++ Sbjct: 145 NNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEK 204 Query: 241 KDSR--CNANKNLRNK-IPIDYF-----VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 S + R+K ID+ ++ ++ +E ++ Sbjct: 205 NWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSCWIDKEQ------------RSREKP 252 Query: 293 SDHCPISIDYDF 304 SDH P+ +D ++ Sbjct: 253 SDHAPVVVDINW 264 >gi|188990144|ref|YP_001902154.1| hypothetical protein xccb100_0749 [Xanthomonas campestris pv. campestris str. B100] gi|167731904|emb|CAP50088.1| putative exported protein [Xanthomonas campestris pv. campestris] Length = 288 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 90/284 (31%), Gaps = 45/284 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R++S+N+ V + + KR + + K D+ QE+ S A Sbjct: 34 PLRVMSFNVR-------VPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYL 86 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKDS 136 + R +R ++D H + + + V++ P + + Sbjct: 87 TAQLPNY-------RWFGQGRRGDDSDEHMGVFYDTRALNVVESGNFWLSDTPEVAGSIT 139 Query: 137 FSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R L E + ++ ++ + H + D E S L+ + L Sbjct: 140 WGNVLPRMVTWALFERRSDKRRFYLFNTHFP---YRDEDEPARERSARLILSRIAQLPA- 195 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +P V+ GDFN + D K P + + + + + Sbjct: 196 -------DIPVVLTGDFN------SDPD---KITYPTLTAVLGDARAKAPKRSGPENTFQ 239 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +++ + + D + G SDH P+ Sbjct: 240 DFSTH---PTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPV 280 >gi|187736008|ref|YP_001878120.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] gi|187426060|gb|ACD05339.1| Endonuclease/exonuclease/phosphatase [Akkermansia muciniphila ATCC BAA-835] Length = 336 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 96/295 (32%), Gaps = 48/295 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY-TLLRQYAKNLDADIVFLQEMGSYNA 79 + VRL++ N E VK + + + + A+IV L EMG A Sbjct: 62 GEPVRLLTMNAGNYFVPEDPRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAA 121 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 V + +R H + +A+ K +S + Sbjct: 122 VR--------DLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIADDRSVTDMPVSGE 173 Query: 137 FSRAG--NRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R R ++ V + ++ ++ IHLKS D ++A L+D Sbjct: 174 AKRKKTMLRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRR------REAYALRD 227 Query: 194 WITQ--KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL-----IRFPKEKDSRCN 246 ++ + + +P ++ GDFN G +D + I P++ Sbjct: 228 YLNEALASQDGMPLLLYGDFN-----DGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETW 282 Query: 247 ------ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + D+ ++ K L ++ IL + +++ SDH Sbjct: 283 TIYYEDGDTYHSF----DHLFLNNTLKKRLGRKPPMGILDSPPSLQA-----SDH 328 >gi|289678676|ref|ZP_06499566.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae FF5] Length = 222 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGSYNA--VAKVFP---KNTWCIFY-STERLINHSKRDSNNDI 110 LR+ + + ADIVFLQE+ KV + + S + + D Sbjct: 15 LREAVRTVSADIVFLQEVHGEQQSHARKVKDWPTISQYEFLADSMWSDFAYGRNAVYPDG 74 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A+ K + ++ + + R +E+ + ++ + +HL Sbjct: 75 DHGNALLSKYPIIQHENL-DISIHGTEQRGLLHCILEV---PHAGRVHAVCVHL------ 124 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L ++ QQ + L + + + P ++AGDFN Sbjct: 125 -GLRESHRR------QQLKLLNE-LMARIPEGEPVIVAGDFN 158 >gi|254293701|ref|YP_003059724.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] gi|254042232|gb|ACT59027.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] Length = 259 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 89/304 (29%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + R + +L+ NL+ D+V QE+ K Sbjct: 1 MKIASWNVN------------SVNARLPTVLEVLK----NLELDVVCFQEI-------KC 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 N + + ++ + +A+ K+ +G R Sbjct: 38 IDDNFPRLEIED---MGYNIITHGQKSYNGVAILSKHPIEDV----QIGLPGDDEDDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L++ + V I+L + + Y + L + Sbjct: 91 YIEALIM--GETPVRVASIYLPNGNPFPGPKFDYKLA------WMDRLNARAKELLSYEE 142 Query: 204 PFVIAGDFN---RKINYLGNNDDFWKTIDPNDS------LIR--FPKEKDSRCNANKNLR 252 V+AGD+N R + + ++ L + + +R N Sbjct: 143 AVVLAGDYNCIPRDEDCYDPAAWVDDALAQPETRGKFRELQWMGYTEGFAARDNRGHQYT 202 Query: 253 NKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 ID+ + A L S +Y + + SDH PI Sbjct: 203 FWDYQAGAWQKDNGIRIDHLLCSPQAADKLKSVS----IYKD---ARGMTKPSDHVPIIG 255 Query: 301 DYDF 304 +++ Sbjct: 256 EFEL 259 >gi|325918813|ref|ZP_08180896.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] gi|325534959|gb|EGD06872.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] Length = 1032 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 99/349 (28%), Gaps = 64/349 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 415 PAPLPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYL--HAP 471 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 D++ E+ + + + + + + ++ + + I V+ Sbjct: 472 DVLGTVEVENLSVLQTLAARINADAVAAGQQDPRYVAYLQEGNDVGGIDVGFLVKTAEVA 531 Query: 119 -KNVRVLQQSYPLLGAKDSFSRA-------GNRRAVELLVEINGK-----KIWVLDIHLK 165 RV S G +++ +R + L ++ + + +H + Sbjct: 532 GGVQRVEVLSIAQEGKTTTWTEPAGGVSLLNDRPPLVLTANVHQADGRTLPLTAIVVHQR 591 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNN 221 S D T + QA++L + +++ ++ GDFN G Sbjct: 592 SLNGAETDDAAGTRIRAKR--QAQAEYLARLLQTRQQVNPDEKVLVMGDFNAFEFNDGYV 649 Query: 222 DDF----------WKTIDPNDSLIRFPKEKDSRCN---ANKNLRNK-----IPIDYFVMD 263 D +T+ D + N++ +D+ + Sbjct: 650 DAMGTVTGKPAPDAQTVVGGDGADLVDPDYTDLTWFNTPNQSYSYAFDGNVQSLDHILAS 709 Query: 264 ------QNAYKFLIQESFSEILY--NEDDIKSRGKRLSDHCPISIDYDF 304 L+ + + + + RLSDH P + Sbjct: 710 DALMRAPQIASLLVGHARINADFPGTARNDANTPTRLSDHDPTVVLLRM 758 >gi|37993831|gb|AAR06996.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTNQNNTLKVMTHNVYMLSTS----LYPNWGQNERADLIGAADYMK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 NA ++ N + + ++ + + + D AI + + + Sbjct: 83 DNNASNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGNYSSSTPEDGGVAIVSKWPIIEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V V+ N + + V+ H+++ D++ SP+ S+ Sbjct: 143 QYVFEKGCGPDNLSNKGF---VYTKVKKNDRFVHVIGTHIQA---EDNMCGQTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFV-IAGDFNRK 214 ++Q Q ++++I K S +V I GD N Sbjct: 196 TKQLQEIQEFIKNKNISNNEYVLIGGDMNVN 226 >gi|69250590|ref|ZP_00605170.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO] gi|68193924|gb|EAN08498.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO] Length = 204 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 33/191 (17%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173 N + + +D +R V ++ + GK I V+ +HL L Sbjct: 44 HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL-------GL 96 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + Q L +W+ + + P ++AGDFN D + + Sbjct: 97 REAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR-QKANHPLK 139 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + E +R + + +D+ K + + + + LS Sbjct: 140 VQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP------LRTWRHLS 193 Query: 294 DHCPISIDYDF 304 DH P+S + Sbjct: 194 DHAPLSAEIHL 204 >gi|260597181|ref|YP_003209752.1| hypothetical protein CTU_13890 [Cronobacter turicensis z3032] gi|260216358|emb|CBA29386.1| Uncharacterized protein ybhP [Cronobacter turicensis z3032] Length = 270 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 81/254 (31%), Gaps = 39/254 (15%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P T F + +++ + + Sbjct: 50 LRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTTHYEFLADTMWSDYAYGRNAVYPEG 109 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV + + + + R + K I V+ +HL Sbjct: 110 HHGNAVLSRYP-IEHYENRDVSVPGTEKRGVLH--CRITPPGFPKAIHVICVHL------ 160 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L+ + + Q L + + P V+AGDFN ++ + + Sbjct: 161 -GLKEAHRQA------QLMMLAELVNSL-PEGEPVVVAGDFN---DWRQQANRILRKEAG 209 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 D + + +R + +D + + + Sbjct: 210 LDEVFTRAHGRPARTFPVSFPLLR--LDRIYVKNASASAPTALPLRN-----------WR 256 Query: 291 RLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 257 HLSDHAPLAVEIHL 270 >gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 788 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|149202233|ref|ZP_01879206.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] gi|149144331|gb|EDM32362.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] Length = 341 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 104/344 (30%), Gaps = 66/344 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--------TLLRQYAKNLDADIVFLQE-- 73 +R+ ++N+ + + + ++ Y L LDAD V + E Sbjct: 1 MRIATYNVEWFNALFDDQGQPHDDGKWSARYNVTRRDQLAALGIVFTALDADAVLVVEAP 60 Query: 74 --------MGSYNAVAKV-----------FPKNTWCIFYSTERLINHSKRDSNNDIHTA- 113 + + + AK+ F +T + R TA Sbjct: 61 DDNGRRSTVKALESFAKLMQLRARRALIGFANDTQQELALLYDPDVLTARHDPQGATTAG 120 Query: 114 --IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS----- 166 + R V + + FS+ VEL I+G+ ++ HLKS Sbjct: 121 GDMPPRFDGVFRIDLDIDDRADRVEFSKPPLE--VELT-TISGRVTRLIGAHLKSKAPHG 177 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKINYL 218 D + QA WL+ I + ++ GD N + Sbjct: 178 AVGRDEAIRIGITNRRKQLAQAVWLRQRIEAHLATDDSLIVLGDLNDGPGLDEYEHLFGR 237 Query: 219 GNNDDFWKTIDPNDSLIRFPKE------------KDSRCNANKNLRN-KIPIDYFVMDQN 265 + + + + P +R R + +DY ++ + Sbjct: 238 SSVEIIMGEGQDAAAALYDPHARGALLQRFGVVHTSARFYLRDQRRYMQALLDYILISPD 297 Query: 266 AYK----FLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I F + + ++ +++ SDH P+S+D + Sbjct: 298 LMARRPVWRIWHPFDDPVCWDNKELRDALLMASDHFPVSLDLEL 341 >gi|120553299|ref|YP_957650.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120323148|gb|ABM17463.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 826 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 83/274 (30%), Gaps = 46/274 (16%) Query: 64 LDADIVFLQEMGSYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 LDADI+ L E+ + A+A++ + W + + N+DI + Sbjct: 504 LDADIIGLMEIENDGYGQTSAIAELAGALGSEWQW------VDPGLAQLGNDDIAVGLLY 557 Query: 117 RKKNVRVLQQSYPLLGAK-DSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLE 174 R V ++ + L A D +R A ++ + + + H KS C Sbjct: 558 RADRVEIVGTAATLSAAPFDQLNRQPL--AQTFRLKDSDDGVTIAVNHFKSKGCGSAEGS 615 Query: 175 NTYSPS---C--SLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 N C + +Q AQ L W+ +I GD +N D + Sbjct: 616 NADQNDGQGCWNPVRTQAAQALASWLADDATGTGEPDVLIIGD----LNAYAQEDPI-RA 670 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + + + +D+ + + + + I +E Sbjct: 671 LASAGYTDLLATYVGEQAYSYVFYGQAGYLDHALANTALAGKIADTTVWPINADEPRALD 730 Query: 288 R-----------------GKRLSDHCPISIDYDF 304 R SDH P+ + + Sbjct: 731 YNTEFKTPEQQASFYAPDAYRASDHDPVIVALNL 764 >gi|271964770|ref|YP_003338966.1| extracellular nuclease-like protein [Streptosporangium roseum DSM 43021] gi|270507945|gb|ACZ86223.1| extracellular nuclease-like protein [Streptosporangium roseum DSM 43021] Length = 795 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 97/319 (30%), Gaps = 46/319 (14%) Query: 14 VPCTASVAQKVRLVSWN-INTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +P V V++ S+N +N + + +R L K ++AD+V L Sbjct: 490 LPAPFPVLGNVKVASFNTLNWFTTLGSRGASNAGEQQRQ---LAKLVAALKGMNADVVGL 546 Query: 72 QEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 E+ AV + + T + H ++ IH A+ + ++++ + Sbjct: 547 MEVQNNGQTAVQALVDALNAEVGAGTYAALAHPYPGTDL-IHVAMIYKPGRLQLVGAAQS 605 Query: 130 LLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDS-LENTYS---PSCS 182 R + G+ ++ H KS C ++ + SC Sbjct: 606 SADPVFR------RPPLIQTFRRVQGGQPFTMIVNHFKSKGCDDEATGPDADQGDGQSCY 659 Query: 183 LLSQ--QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + QA+ I + ++ GD +N G D L K Sbjct: 660 NGERVRQAEATLGLIDSLELPNP--LVLGD----LNAYGEEDPI--DTLETGGLTSVTKR 711 Query: 241 KDSRCNANKNLRNKIP--IDYFVMDQNAYKFLI--------QESFSEILYNEDDIKSRGK 290 L +D+ ++ + K + + + YN + Sbjct: 712 FVPAPLRYSYLYEGQLGELDHALVGKALLKRVTSATIWHINADESRILDYNTEYNPPALY 771 Query: 291 RL-----SDHCPISIDYDF 304 R SDH P+ I Sbjct: 772 RPDAFRSSDHDPVVIGLTL 790 >gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland 1988] Length = 256 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----- 254 P +I GDFN + + I + +K ++ + Sbjct: 157 AENSPVIILGDFN-----TEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPI 211 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + E F Y + G SDH P++ + D+ Sbjct: 212 NELEKIDYIFVS---------EEFQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|19745837|ref|NP_606973.1| hypothetical protein spyM18_0808 [Streptococcus pyogenes MGAS8232] gi|19747984|gb|AAL97472.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 910 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 97/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ + + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPAYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|126341987|ref|XP_001374214.1| PREDICTED: similar to DNL1L gene product [Monodelphis domestica] Length = 644 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 77/251 (30%), Gaps = 38/251 (15%) Query: 67 DIVFLQEMGSYNA---------VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI +QE+ + + P + + + S + K + R Sbjct: 407 DICLVQEVRDSKGTAMSLLLQELNRADPGHLYEVLESRRLGLGSYKEQNV------FVYR 460 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLE 174 V ++ SY + A+ S A R + + +L H C ++ Sbjct: 461 ADVVSIMD-SYQVPEAEPSQEEAFLRGPFVARFCWPDSGSCNLVLLSHH---ACPRNAPR 516 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L + Q LK + + ++ GDFN ++ + + Sbjct: 517 ELDQ-----LYRVVQDLK-----RLWDVQDVMLLGDFNAGCTFVPPEAWPGIRLWHHPDF 566 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL- 292 ++ + + D ++ A + ++ S + ++ S + L Sbjct: 567 HWLIGDQVDTTVSRRTH---CAYDRIIVHGKALLQAVVPGSAKTFNFQKELGMSEEEALQ 623 Query: 293 -SDHCPISIDY 302 SDH P+ + Sbjct: 624 VSDHYPVEVCL 634 >gi|15674798|ref|NP_268972.1| hypothetical protein SPy_0747 [Streptococcus pyogenes M1 GAS] gi|71910384|ref|YP_281934.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS5005] gi|13621927|gb|AAK33693.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|71853166|gb|AAZ51189.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS5005] Length = 910 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 96/325 (29%), Gaps = 63/325 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKS- 166 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 167 -------FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 C + +L A L + + + V+ GDFN Sbjct: 721 RGDNALYGCVQPVTFKSEQRR-HVL---ANMLAQFAKEGAKHQANIVMLGDFNDFEFTKT 776 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 + I+ D + + S + + N +D ++ ++ L+ +++ Sbjct: 777 I-----QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMV 827 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + R SDH P+ + F Sbjct: 828 HVNSPFMEAHGRASDHDPLLLQLSF 852 >gi|89072881|ref|ZP_01159438.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium sp. SKA34] gi|89051403|gb|EAR56858.1| endonuclease/exonuclease/phosphatase family protein [Photobacterium sp. SKA34] Length = 351 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 104/326 (31%), Gaps = 66/326 (20%) Query: 14 VPCTASVAQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVF 70 P ++++ S+N+ N L+ ++N L DI+ Sbjct: 9 FPLVPIAQSEIKIASFNLLNYLAPPNAYYDFENIYSYEQWHKKQHWLTSILDAQQPDIIG 68 Query: 71 LQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQ 126 QE+ A+ + + + + + R I + + + V + Sbjct: 69 FQEVFSADELKALLRDIGYPHFAVVDKPKVEGDFIYRSPVVAIASKFPITEVIAVEADNE 128 Query: 127 SYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSL 183 + L+G A+ SFSR R V++ + HLKS F D L T + + S Sbjct: 129 AAQLMGWAEFSFSRKPLRATVDI---PHIGATDCYVTHLKSKRSLFDDPLPETIAKTGSA 185 Query: 184 L-SQQAQWLKDW-----------------ITQKKESLVPFVIAGDFN------------- 212 L S Q L W + +++++ P V+ GD+N Sbjct: 186 LSSFLGQRLGSWGSSMLRGTEAALLQLAMVKRREQTSNPMVLCGDYNDVISSSCLEELTA 245 Query: 213 ------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN--KIPID 258 R IN+ D W+ + +D + N +D Sbjct: 246 SRVYGMSESDTERLINFYCLYDG-WQLYTQINP-------QDEETRPATHYYNGKGSVLD 297 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDD 284 Y ++ Q + F Y+ +D Sbjct: 298 YILLSQEFNARYLGSLFEVSHYHTED 323 >gi|217969881|ref|YP_002355115.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] gi|217507208|gb|ACK54219.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] Length = 254 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 89/305 (29%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L R L D + LQE K Sbjct: 1 MKIATWNVNSL------------KVRLPQVLDWLAA----NQPDALCLQE---LKLEDKA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---NVRVLQQSYPLLGAKDSFSRA 140 FP + + + +A+ + + ++ P + A Sbjct: 42 FP-------LAELEAAGYHAVFIGQKTYNGVAILSPQPIDAATVVRNIPGFEDEQKRIIA 94 Query: 141 GNRRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 V ++ NG+ + D E L +W+ + Sbjct: 95 ATIAGVRVVCGYFPNGQAV-----------GSDKFEYKLRW--------LAALTEWLRAE 135 Query: 199 KESLVPFVIAGDFN----RKINYLGNNDDF------------WKTIDPNDSLIRFPKEKD 242 ++ V+AGDFN + + D+ + + D+ F + + Sbjct: 136 LKTHERLVLAGDFNIAPEDRDAHPDWKDEIHVSAPERAAFRALQELGLIDAFRLFEQPER 195 Query: 243 SRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + ID+ ++ + + +++ R +R SDH P Sbjct: 196 AFSWWDYRMMAFRRNFGLRIDHLLVSPALRA-----ACRNCVVDKE--PRRLERPSDHAP 248 Query: 298 ISIDY 302 + ++ Sbjct: 249 VVLEL 253 >gi|126660415|ref|ZP_01731525.1| hypothetical protein CY0110_01315 [Cyanothece sp. CCY0110] gi|126618281|gb|EAZ89040.1| hypothetical protein CY0110_01315 [Cyanothece sp. CCY0110] Length = 92 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 13/96 (13%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++WN+ L +L R + L Q KNL AD++ +QE+GS + Sbjct: 3 TFKVMTWNLENL---FQPNLNDAEQSRKYQEKLQSLSQLIKNLAADVIGVQEVGSPESFE 59 Query: 82 KVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + S + I + Sbjct: 60 DLINQLNGQY-------PYSQLSTQSDRRGIRVGFS 88 >gi|119497479|ref|XP_001265498.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] gi|119413660|gb|EAW23601.1| endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] Length = 439 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 100/313 (31%), Gaps = 34/313 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQY 60 +R + L L +P A+ A + ++S+N+ L L N V +D + + Sbjct: 1 MRPFHLLLAAG-IPALAATAGEFNILSFNVAGL----PAILNGNEVPGDKTDNSRQIGKK 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE +Y+A + + S I +N T VR K Sbjct: 56 FAEYGYDVIHVQEDFNYHAYIYETDNHPYRTPTSGGAAIGSGLNTLSNFQFTNF-VRTKW 114 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 F+ R G + ++H + D ++ + Sbjct: 115 GTCSNAEGADCLTPKGFTSMRVRV-------DEGVYVDFYNLHADAGSKDDDVKARSAN- 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP--NDSLIRFP 238 Q L D+I ++ GD N + G+N ++T + N + Sbjct: 167 -------LQQLADYIKV-NSVGNAVLVFGDTNARYTRSGDNIRVFQTQNGMVNPWVELIL 218 Query: 239 KEKDSR-------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 K + C + +D + L + + +G Sbjct: 219 KGAEPAEGSNALICQNPSTTNDCETVDKIFYRGSRAADLKA--VFWNYESNKFLSDKGTI 276 Query: 292 LSDHCPISIDYDF 304 LSDH PI+ ++ + Sbjct: 277 LSDHNPITTNFTW 289 >gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 339 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 109/315 (34%), Gaps = 62/315 (19%) Query: 1 MIRKYVLALVFFLVPCTAS-VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 ++ L+ F L + + ++++N+ S KN + T+ + + Sbjct: 76 LVSYVSLSSFFKLRFSNPTDTTADLSVMTFNVR--------SFNKNMNIKNTAVFEETLE 127 Query: 60 YAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D DI+ QE Y K F + + + + Sbjct: 128 LITTEDPDIICFQEF--YYKKQKDFKNYKYMYL---------EYIKNPGKVKLGFYSKYP 176 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + ++P +F V+++V+ + + V ++HL+S + + Sbjct: 177 IINKGLINFPESPNNAAF--------VDIVVKND--TVRVYNLHLESLRVIPDKDIIAQE 226 Query: 180 SCSLLSQQAQ------WLKDWITQKKESLVPF--VIAGDFNRKINYLGNNDDFWKTIDPN 231 L ++ + I ++ + P+ +I GDFN + +KTI + Sbjct: 227 ESKKLYRRLTNSFKKQQQQAQIIKEHKDKSPYRAIICGDFN-----GTQYSNVYKTIRGD 281 Query: 232 DSLIRFPKEKDSRCNANKN--LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++ ++ + ID+ L+++SF+ + + K+ Sbjct: 282 ---MQDTFQEKGSGYGRTYNFRYYPVRIDFI---------LVEDSFNVLSH-----KNYN 324 Query: 290 KRLSDHCPISIDYDF 304 +LSDH P+ ++F Sbjct: 325 VKLSDHFPVMTSFNF 339 >gi|86741914|ref|YP_482314.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86568776|gb|ABD12585.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 385 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 87/282 (30%), Gaps = 47/282 (16%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYSTERLINHSKRD 105 + Q +++AD++ + E + A+ + + + Sbjct: 122 DETAIRSTAQVITDINADVLAVIEAENRPALVRFNTSLLAGLYAHVMLVDGNDP------ 175 Query: 106 SNNDIHTAIAVRKKN---VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 I + + + V P D + + A EL G IWVL Sbjct: 176 --RGIDVGLLAKPGHTIGSIVSHVDDPDPARPDRPLFSRDCPAYELH-TPAGNTIWVLPN 232 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNN 221 HLKS + + +QA + + T +++ ++ + GD N+ + Sbjct: 233 HLKSQSWTSGNPDPLRR------RQAHRVAEIYTALRDAGARYIAVVGDLNKPPPPAFPS 286 Query: 222 DDFWKTIDPNDSLI------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES- 274 + P+ L+ F + RN+ +DY ++ + + Sbjct: 287 --LEPLLGPDSPLVDAASRAGFDTGPRPGTFQSCTARNR--LDYILLSPDLADRMTGGQI 342 Query: 275 FSEILYNEDDIKSRGKR-------------LSDHCPISIDYD 303 L+ + D K + SDH + +D D Sbjct: 343 VRTGLWGDPDNKHPSAQWVIHPKITRADQAASDHAALYVDLD 384 >gi|261250441|ref|ZP_05943016.1| extracellular nuclease-related protein [Vibrio orientalis CIP 102891] gi|260939010|gb|EEX94997.1| extracellular nuclease-related protein [Vibrio orientalis CIP 102891] Length = 871 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 115/381 (30%), Gaps = 105/381 (27%) Query: 22 QKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N +N + G + R + + + LDADI+ L E Sbjct: 476 GDLRIATFNVLNYFNSPFGGDANPHGNNRGANSFEEFEVQQAKIVNAILRLDADIIGLME 535 Query: 74 MG-----SYNAVAKVFP---------KNTWCIF---YSTERLINHSKRDSNNDIHTAIAV 116 + A+ ++ K+ + I + +++ + + + I T + Sbjct: 536 IENNGFGDSGAIRQLVDQLNAQIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 595 Query: 117 RKKNVRVLQQS------------YPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K V++ G + R ++ ++ G +KI V Sbjct: 596 RPKVVKLKDSRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 655 Query: 163 HLK---SFCFLDSLEN----------TYSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIA 208 HLK S C+ D+ SC A L D +++ K VI Sbjct: 656 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALSEIKGHK---VIL 712 Query: 209 GDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEK----------------------- 241 GD +N G D D I+ + Sbjct: 713 GD----LNAYGMEDPLLVLTDYSQEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYIN 768 Query: 242 -DSRCNAN--KNLRNKIP--IDYFVMDQNAYKFLIQ------ESFSEILYNED-----DI 285 ++ + N N +D+ +M + K + L++ + D+ Sbjct: 769 AVAKAHPNSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDL 828 Query: 286 KSRG--KRLSDHCPISIDYDF 304 R SDH P ++ + Sbjct: 829 PKYNDHFRSSDHDPAVLELNM 849 >gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 788 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNHFVQGIQKKNANAPVVVLGDMN-DFEFAKPLKAL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|228469355|ref|ZP_04054373.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] gi|228309152|gb|EEK17772.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas uenonis 60-3] Length = 350 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 94/331 (28%), Gaps = 59/331 (17%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKN-----------SVKRTTSDYTLLRQYAKNLD 65 Q+ VS+N+ L + + W + + R L + ++ Sbjct: 24 HLVAQQRFTFVSYNVENLFDTIPSTRWDDREYLPTARKGWTAPRMKRKCRQLAEVISHVT 83 Query: 66 A-DI---VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 A DI + LQE+ S A+ ++ + S + H A+ Sbjct: 84 AWDIPALIALQEVESVEALEQL---GQHTLLSSANYKTICATGSDRRGSHVALLYDADRF 140 Query: 122 RVLQ-QSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + + +PL D + L + ++ ++ HL S + E + Sbjct: 141 ALERIEEWPLRITPDSVYPTRNLLFVSGRL--PSAARLSLIVCHLPSRRGGATAEKARAT 198 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW---------KTIDP 230 +L + L + ++ GDFN + +++ Sbjct: 199 LIKMLRMRTDSL-----LMADPAQSIIVLGDFNATPEDALTDSWALSYQAYQSQVDSLEM 253 Query: 231 NDSLIRFPKEKDSRCNANKNLRN--KIPIDYFVMD-----QNAYKFLIQESFSEILYNED 283 D F E+ ID + ++ Y + E+ L + Sbjct: 254 VDLTPPFTSEQLETMPPGSYYYRGSWERIDRLFVSRSLLAESHYPHIELETVRIALPPQQ 313 Query: 284 DI----------------KSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 314 YMHETPAPWGRPRRTYGGDTYLGGPSDHLPL 344 >gi|254447579|ref|ZP_05061045.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198262922|gb|EDY87201.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 261 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 94/308 (30%), Gaps = 77/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+N+L + L + + + D++ LQE Sbjct: 1 MKIASWNVNSLKVRLPYVL----------------DWLEQTNTDVLCLQETKLTDDKFPD 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + + +S ++ + +A+ +K + + G D Sbjct: 45 LAIEEAGYEVAFSGQKT------------YNGVAILLKKNAASLRDVVTDVPGLVD---- 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + V+D+++ + + S + Y + + D+I Q+ Sbjct: 89 -PQRRIMAATIGD----VRVIDLYVVNGKEVGSDKYDYK------LHWLKKVGDYIEQQS 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF-WKT-----IDPNDSLIRFPKEKDSRC-------- 245 + ++ GDFN D W D+L R C Sbjct: 138 QQYEKLIVLGDFNIAPEDEDVYDPIAWSEKILCSTPERDALKRIKDNGLKDCFRMLNQDS 197 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID + + K L D G++ SDH Sbjct: 198 GEYSWWDFRTKGFENGRGLRIDLILASEALQKVLKGCWI-------DRQPRAGEKPSDHA 250 Query: 297 PISIDYDF 304 P+ ++ + Sbjct: 251 PVVAEFTY 258 >gi|91793693|ref|YP_563344.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91715695|gb|ABE55621.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 475 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 91/301 (30%), Gaps = 46/301 (15%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + ++++NI L + + +R +R + D++ LQ Sbjct: 194 ALATDPIANNSLTVMTYNIWAL-----PVIASHINERLALLPQKMRGH------DVLMLQ 242 Query: 73 EM--GSYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQ 126 E+ A + + + + S +I+ I R V Q Sbjct: 243 EVFAPGRGAFLRALAQEYPYQTRMLDK---------SGVNIYDGGVMIVSRYPIVAQAQF 293 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 YP D F+ G A + G+ V H S F + + + Sbjct: 294 VYPDCSGTDCFADKGINYAQVIK---QGEAYHVFATHTAS--FDTDVARSNR------QK 342 Query: 187 QAQWLKDWITQKKE-SLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDSLIRF------- 237 Q + ++++ + + GDFN + + + + Sbjct: 343 QFKQMREFAHSLAIPADETVIYGGDFNVNKRKFEDDYQQMFANLKAKQPSYSGYIESTFD 402 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 P+ + N +DY V+ + ++ ++ + + LSDH P Sbjct: 403 PRINEFAGTPLSGGENVEYLDYIVISDEYAQTQSNDNDVKVPRSSAASLWQKWNLSDHFP 462 Query: 298 I 298 + Sbjct: 463 V 463 >gi|322411464|gb|EFY02372.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 941 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 94/324 (29%), Gaps = 61/324 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 563 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 616 Query: 77 -------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 +A+ K+ T+ + N +I T + V + Sbjct: 617 DGTTDATQSAQRLIDAIQKL-GGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPDRVSL 674 Query: 124 LQQS---------------YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKS 166 + +G D + A R+++ G K+ V+ HL S Sbjct: 675 SDKPKGGAKDALSWVNGELNLSVGRIDPTNPAWKDVRKSLAAEFVFQGNKVIVVANHLNS 734 Query: 167 FCFLDSLENTYSPSCSLLSQQ------AQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 ++L P + A L + + V+ GDFN Sbjct: 735 KRGDNALYGRVQPV--TFKSEERRHVLANMLAKFAKEGATHQANIVMLGDFNDYEFTKTI 792 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + I+ D + + + N +D ++ L Q F ++++ Sbjct: 793 -----QLIEEGDMANLVSRHDLADRYSYFYQGNNQTLDNMLVS---RNLLGQYEF-DMVH 843 Query: 281 NEDDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 844 VNSPFMEIHGRASDHDPLLLQLSF 867 >gi|301347815|ref|ZP_07228556.1| nuclease [Acinetobacter baumannii AB056] Length = 555 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 103/331 (31%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGS 76 A +R+ S+N+ + T +++ K++DAD+ L E+ + Sbjct: 204 ANHIRVASFNVLNY-DNGATGFPTERGANTQAEFDKQHHKIVSALKSIDADVYGLMEIAN 262 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + W + R N+ I AI K V+ L ++ Sbjct: 263 NGYGPNSAIAHLTSALGPDWKYVI-----PENLDRLGNDVIAVAIIYNSKRVKPLNKAV- 316 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPS-----C-- 181 D + A K V+ HLKS C ++ + C Sbjct: 317 ---VLDLGDKNRTTLAQTFQAVRGNKIFTVIPNHLKSKGCSGVDASSSDADQNDGQGCWN 373 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N + + N + Sbjct: 374 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEAPILAFEKANYKVLLNDAKVGQ 433 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N + N +D+ + D + Y ++ + + YNE Sbjct: 434 GAQAYSYVFGVASDANGNGGVGN---LDHAIADADLYPKVVRTFAWHINADEPMVLDYNE 490 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 491 EYKTDEQKALFYGEDAYRSSDHDPVIVDLDL 521 >gi|261362088|gb|ACX71476.1| sphingomyelinase [Bacillus cereus] Length = 243 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 21/207 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFN 212 Q + ++D+I K +V+ GD N Sbjct: 198 QLKEIQDFIKNKNIPXDEYVLFGGDMN 224 >gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 788 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|222837089|gb|EEE75468.1| predicted protein [Populus trichocarpa] Length = 203 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 33/191 (17%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173 N + + +D +R V ++ + GK I V+ +HL L Sbjct: 43 HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL-------GL 95 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + Q L +W+ + + P ++AGDFN D + + Sbjct: 96 REAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR-QKANHPLK 138 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + E +R + + +D+ K + + + + LS Sbjct: 139 VQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP------LRTWRHLS 192 Query: 294 DHCPISIDYDF 304 DH P+S + Sbjct: 193 DHAPLSAEIHL 203 >gi|162456399|ref|YP_001618766.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] gi|161166981|emb|CAN98286.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] Length = 269 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 93/308 (30%), Gaps = 81/308 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGS----Y 77 +R+ SWN+N RT L + D+V +QE + Sbjct: 1 MRIASWNVN--------------SIRTR--LEQLTSWLVRAAPDVVCMQETKVEDGSFPE 44 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A+++V + ++ N AIA R + +D Sbjct: 45 AALSEV----GYRSVIFGQKSYNG----------VAIATRFGLSVDDVKKGLDGDEQDV- 89 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 RR + +E I V+++++ + + + Y + + L+ + Sbjct: 90 ----ARRMLAATIE----GIRVINVYVPNGQAVGTPAFAYKLA------WLERLRSELEA 135 Query: 198 KKESLVPFVIAGDFN---RKINYLGNNDDFWKTI---DPNDSLIRFPK----EKDSRCNA 247 + +I GDFN I+ + + D +L R + + C+ Sbjct: 136 RYRPDQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAALGRLMEWGLVDAFRACHP 195 Query: 248 NKNLRNKI-------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 K + ID ++ + S D +R SD Sbjct: 196 AKEAYSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSI-------DTRPRELQRPSD 248 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 249 HAPVVVEI 256 >gi|124266264|ref|YP_001020268.1| hypothetical protein Mpe_A1072 [Methylibium petroleiphilum PM1] gi|124259039|gb|ABM94033.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 270 Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 37/210 (17%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++P + +++R+ ++NI +GV + KR L + LDAD+V LQ Sbjct: 8 VLPPASGDERRLRVATYNI-----HKGVRGVGPA-KRLE--IHNLGLAIEALDADLVCLQ 59 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR---------KKNVRV 123 E+ + ++ ++ + + +A R N + Sbjct: 60 EV------RRFHKRDARRFDRTSFGWPQQGQAEFLAPEGYDVAYRTNAITRHGEHGNALL 113 Query: 124 LQQSYPLLGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + S D R R + + V G+ + + H F S + Sbjct: 114 SRWSIGEPNHHDVSDHRFEQRGLLHVQVNWQGRAVDTIVAH-----FGLSHSSRLR---- 164 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 Q Q L ++ Q+ + VP ++AGDFN Sbjct: 165 ----QVQRLAAFVRQELDPAVPLLVAGDFN 190 >gi|190573815|ref|YP_001971660.1| hypothetical protein Smlt1836 [Stenotrophomonas maltophilia K279a] gi|190011737|emb|CAQ45357.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 298 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 96/295 (32%), Gaps = 45/295 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ ++++S+N+ T ++ E W + + + + ++ QE+ Sbjct: 38 AAAPAPLKVMSFNVRTPADTEPGKRWPDRR-------DAMVKVILDAHPAVIGTQELVKE 90 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLL 131 A + R +R + D H + K + + + P + Sbjct: 91 QA-------DYLSEHLRGYRWFGEGRRGGSGDEHMGVFYDSKVLAIEESGNFWLSDTPDV 143 Query: 132 GAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 ++ R L +G++ + ++ HL + D E L+ ++ + Sbjct: 144 PGSITWGNLYPRMVTWALFRRLDDGRRFYFMNTHLP---YRDEDEPRRVKGAELIGKRVE 200 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L +P V+ GDFN + G+ + + + + Sbjct: 201 ALPA--------DLPVVLTGDFNSEPG--GDTYKAFTRLLQDTRT-----QVKVPQGPRL 245 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ +++ F + DD + G SDH P+ ++ D+ Sbjct: 246 TFH-----DFTGKATVQLDWVLVRGFHARSFLTDDRRIDGVLPSDHFPLVVELDW 295 >gi|47214833|emb|CAF95739.1| unnamed protein product [Tetraodon nigroviridis] Length = 317 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +I GDFN Y+ N D I + + + +NKN I V Sbjct: 165 DNVMILGDFNADGAYVSNRDMKKIRIRSDKNFHWLIGDDVDTTASNKNSHTYDRI--VVY 222 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + + ++ S + ++ S + L SDH P+ ++ Sbjct: 223 GDDMLQAVVPNSAKTFNFQKEYRLSDEQALKISDHYPVEVEL 264 >gi|332299845|ref|YP_004441766.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] gi|332176908|gb|AEE12598.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] Length = 390 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 88/268 (32%), Gaps = 64/268 (23%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y DADI+ LQE ++ + + S L H + +A AV+ Sbjct: 154 DYLAESDADIICLQE----AWLS-----DNDSKYMSERSL--HHTMQAYPYYSSAYAVKD 202 Query: 119 KNVRVLQQS-YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-- 175 R++ S YP+L + + + + KK+ + ++HL+SF F + Sbjct: 203 HGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLVLYNLHLESFGFTKEEQKLY 262 Query: 176 ------------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFV-IAGDFN-RKI 215 +SP ++Q + + + ++ P+V I GDFN I Sbjct: 263 FQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQES---PYVLICGDFNDTPI 319 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----IDYFVMDQNAYKFLI 271 +Y + + + + N + K ID+ + + Sbjct: 320 SYTHHR------LSTGLHDAIATTGRGT----NYSYYFKSLIGVRIDHMLYSDHIEARAA 369 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPIS 299 R +SDH PI Sbjct: 370 -------------YVDRTAEISDHKPII 384 >gi|323492096|ref|ZP_08097258.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546] gi|323313657|gb|EGA66759.1| hypothetical protein VIBR0546_14882 [Vibrio brasiliensis LMG 20546] Length = 869 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 114/381 (29%), Gaps = 105/381 (27%) Query: 22 QKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQE 73 +R+ ++N +N + G + R + Y + LDADI+ L E Sbjct: 474 GDLRIATFNVLNYFNSPFGGDANPHGDNRGANSYEEFEVQQAKIVNAILRLDADIIGLME 533 Query: 74 MG-----SYNAVAKVFP---------KNTWCIF---YSTERLINHSKRDSNNDIHTAIAV 116 + A+ ++ K+ + I + +++ + + + I T + Sbjct: 534 IENNGFGDSGAIRQLVDQLNSRIEKKKDRYDIVAIDSNGDKVTDENDYIGTDVITTGVIY 593 Query: 117 RKKNVRVLQQS------------YPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDI 162 R K V++ + G + R ++ ++ G +KI V Sbjct: 594 RPKVVKLKESRVIPMPSQQAPEVLDDNGKVIEDGKNYQRDSLAPTFKVKGTKEKITVAIN 653 Query: 163 HLK---SFCFLDSLEN----------TYSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIA 208 HLK S C+ D+ SC A L D + + VI Sbjct: 654 HLKSKGSKCWEDAAPVEQGGQGGQDLDKQGSCENFRVAAAVALGDALNEIDGHK---VIL 710 Query: 209 GDFNRKINYLGNNDDFWKTID----PNDSLIRFPKEK----------------------- 241 GD +N G D D I+ + Sbjct: 711 GD----LNAYGMEDPLLVLTDYSEEKYGKTIKAARNTYIDGQVQFGDEGAVITDSYGYIN 766 Query: 242 -DSRCNAN--KNLRNKIP--IDYFVMDQNAYKFLIQ------ESFSEILYNED-----DI 285 ++ + N N +D+ +M + K + L++ + D+ Sbjct: 767 AVAKAHPNSWSYSYNDEVGALDHLLMSPSLEKHFVDATDWHINGGESKLFDYNEEYKGDL 826 Query: 286 KSRG--KRLSDHCPISIDYDF 304 R SDH P ++ + Sbjct: 827 PKYNDHFRSSDHDPAVLELNM 847 >gi|284033091|ref|YP_003383022.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283812384|gb|ADB34223.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 355 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 67/258 (25%), Gaps = 43/258 (16%) Query: 52 SDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKVFPK---NTWCIFYSTERLINHSKRDS 106 +D + + D+V L E + + N + + ++ S S Sbjct: 114 ADPAEVAHLIRAHRPDLVSLPEAQVEIRQKIQAELGGLGYNGYTVQANSAVESATSVLVS 173 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG---------NRRAVELLVEINGKKI 157 + + + P R G R ++ + Sbjct: 174 ATLGKVTFGADTLDPGRVNAALPSAEPATGDPRPGRAGVVEQTTTRFGHIVVTGGTLGDL 233 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 ++ H E T Q L+ W VP ++AGDFN ++ Sbjct: 234 RLIAYH---GFPPLPPEVT------TWKQDLDVLRTWC----AGDVPTIVAGDFNATTDH 280 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + + + A++ + ID+ V Sbjct: 281 ADFRDALGRNCRSVGPA--VGEGLNGTWPADRPALFRTVIDHVVTGPGV----------- 327 Query: 278 ILYNEDDIKSRGKRLSDH 295 +++ + SDH Sbjct: 328 ---EPSRLRTYHLQGSDH 342 >gi|154253458|ref|YP_001414282.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] gi|154157408|gb|ABS64625.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] Length = 261 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 90/275 (32%), Gaps = 59/275 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + K + DIV LQE+ K +N + + ++ + + +A+ Sbjct: 18 LTDWLKEAEPDIVCLQEL-------KCIDEN---FPHGPIEELGYNVAVNGQKTYNGVAI 67 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K+ G + R +E +V NG + V I+L + +D+ + T Sbjct: 68 LSKHPLEDV----SRGLPGNDGDDHARY-IEAVVSANGSVVRVASIYLPNGNPVDTDKFT 122 Query: 177 YSPSCSLLSQQAQWLKDWIT-QKK--ESLVPFVIAGDFN--------RKINYLGNNDDFW 225 Y W+ I ++ P V+AGD+N ND + Sbjct: 123 YK---------LGWMDRLIDHARELLSYEEPLVLAGDYNVIPTIDDVHNPA-AWVNDALF 172 Query: 226 KTIDPN---DSLIRFPKEKDSRCNANKNLR-------------NKIPIDYFVMDQNAYKF 269 + + + + C+ + N I ID+ ++ A Sbjct: 173 RPETRAKFRELINLGLTDAFRACHREAHRYTFWDYQAGAWAKDNGIRIDHLLLSPQAADL 232 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L + D ++ SDH PI ++ D Sbjct: 233 LKAS-------DIDRAVRGREKPSDHVPIWVELDL 260 >gi|167521878|ref|XP_001745277.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776235|gb|EDQ89855.1| predicted protein [Monosiga brevicollis MX1] Length = 362 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 89/320 (27%), Gaps = 54/320 (16%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---- 76 ++ + ++N+ + L S + LL Q + D++ L E + Sbjct: 51 RLTVAAFNVLADGLDVNGQWSYIDPATVTFERRKDLLLQEIDRIAPDVLGLAECNNFTEF 110 Query: 77 --YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + + + + R A+ VR L PL A Sbjct: 111 WAPELARR-----GYHGVFQPKSHGPAA-RFGAQPDGVALFVRTAAGLEL-IGEPLRNAM 163 Query: 135 DSFSRAGN-RRAV--ELLVEINGKK---------IWVLDIHLKSFCFLDSLENTYSPSCS 182 + + R + E + + V H K+ DS Sbjct: 164 RPVAISALVRAGLTAESTINKSSTPAMTSSPAFLFRVAMTHFKAG-KGDSNTALRRQDTQ 222 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFN------------RKINYLGNNDDFWKTI-- 228 +L Q L + + ++ GDFN + D W T Sbjct: 223 MLLTQ---LDAAAAAAESEVQATIVMGDFNCEPTEDCHAPWRERGFLCAVEDMPWTTWKF 279 Query: 229 --DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED--- 283 P + P + + IDY + + E+F ++ + D Sbjct: 280 RDTPTEPGTAPPPGTAPLTQPKEK---REKIDYIYVLNGPGAQVAVEAFLDVPADADIPR 336 Query: 284 DIKSRGKRLSDHCPISIDYD 303 + + SDH ++ + Sbjct: 337 ALPAPNYA-SDHLAVAARLN 355 >gi|256377138|ref|YP_003100798.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] gi|255921441|gb|ACU36952.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] Length = 895 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 22/150 (14%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 TA+ +R+++WN + + RT LL + DAD++ LQE+ Sbjct: 110 TAAPGASLRVLTWNTLW-------DKYNPELVRTARRRPLLLAELQVADADVIALQEVEP 162 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + W +R + + T+ AV + +L + + + Sbjct: 163 ELAA--MLAAAPWV-----------RERYTFDTAPTSAAVGDTGLLLLSRVPVRESGRHA 209 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 FSR A + VE + V+ HL S Sbjct: 210 FSRRKGLAA--ITVETAAGPVVVVSTHLTS 237 >gi|163793638|ref|ZP_02187613.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] gi|159181440|gb|EDP65955.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] Length = 258 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 75/289 (25%), Gaps = 73/289 (25%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-------M 74 VR+++WNI L + G D +R+ +L DI +QE + Sbjct: 3 SVRVLTWNIHGFLGQDGGF------------DPERVRRIIADLSPDIAAIQEVVGPECGV 50 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + P R+ + + VR + Sbjct: 51 DGAAVLRASMPGADAIEANVERRIEGIYGQMLLSR----FPVRHWTKVDISVE------- 99 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R RRA++ +++ G + V+ HL C LL Sbjct: 100 ----RREPRRAIDAVLDAPGGPMRVICTHL--GLTGSERRLQVGALCRLLD--------- 144 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + + ++ GD N D + R Sbjct: 145 ----ADPRIDTLVLGDIN---------DWRIGGVSERCLAPVLGAGTRHRTYPAAFPVF- 190 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 P+D + E + ++ G SDH P+ D Sbjct: 191 -PLDRI--------WFRP---VERVIRTRVVREAGLA-SDHLPVVADIS 226 >gi|160900734|ref|YP_001566316.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366318|gb|ABX37931.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 289 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 96/316 (30%), Gaps = 66/316 (20%) Query: 24 VRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM------- 74 +++++WN L + D + +A ++ D D++ LQE+ Sbjct: 2 MQILTWNTQWCLGLDGRM------------DPERIVAHALSMADIDVLCLQEIAVHYPGL 49 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 V P+ F + R ++ +A R +++ P Sbjct: 50 QGAPGDQVEQVRAALPEGWKVFFGAAVDEFTAVGRQRFGNL---VATRLPVLQLAHHRLP 106 Query: 130 LLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D R+ R V + V+ HL+ S + + +L S Q Sbjct: 107 YP--HDGGVRSMPRCCTAATVMDAALGPVRVMSTHLE----YFSRRQRMAQALALRSLQI 160 Query: 189 QWLKDWIT----------QKKESLVPFVIA-GDFN---RKINYLGNNDDFWKTIDPNDSL 234 + L Q+ + P + GDFN + Y G + W + Sbjct: 161 EALGQAEAPPQPASDGSPQQTKPHTPHAVLCGDFNFEPHEDEYAGLSRP-WAAGEEGA-- 217 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR------ 288 + + + P + + D ++ + + + D ++ Sbjct: 218 --LTAGQWHNSWSVLHPDQPQPPTFRLFD---RQWGPEPGACDFAWVSDSLRGHVRGWAV 272 Query: 289 --GKRLSDHCPISIDY 302 RLSDH P+ + Sbjct: 273 DSDTRLSDHQPVLLQL 288 >gi|325292791|ref|YP_004278655.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] gi|325060644|gb|ADY64335.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] Length = 267 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 81/281 (28%), Gaps = 60/281 (21%) Query: 55 TLLRQYAKNLDADIVFLQEM---------------GSYNAVAKV--------FPKNTWCI 91 L Y D DI+ LQE+ + + + I Sbjct: 15 DELVPYISASDPDILCLQEVVHTPAAEEDWLSYRDDGRDLPQRANFLRDVEEALPDHLAI 74 Query: 92 F---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS------YPLLGAKDSFSRAGN 142 F + ++ S + T VRK V Q + G D R+ Sbjct: 75 FCPASQGDLWHGETRYPSQWGLAT--FVRKSIAIVAQAQGFVHGCFSANGYGDH-PRSRT 131 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 AV + G+ + +H + ++ QA+ L + E Sbjct: 132 GHAVRVFDFTTGQPAVIAHMH---GLRDPNGKHDI----PARLMQAKRLVKLVKDIAEDG 184 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN + D + + D + + + + DY ++ Sbjct: 185 DRIIVCGDFN-----VLPESDTFTVLKELDLIELVTTRGFTDTRTSHYAKQNRFADYMLV 239 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ R +SDHCP+ I++ Sbjct: 240 NPV---------VQVDHFDV----VRQPEVSDHCPLLIEFS 267 >gi|94994049|ref|YP_602147.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] gi|94547557|gb|ABF37603.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] Length = 910 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YADIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVSRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|311109328|ref|YP_003982181.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] gi|310764017|gb|ADP19466.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] Length = 262 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 87/277 (31%), Gaps = 67/277 (24%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L+ + + AD++ LQE+ KV ++ H ++ + + Sbjct: 20 LQPWMEKHAADVLCLQEI-------KVSHEDLTDDLRHPPGYTGHFHHAVKKG-YSGVGI 71 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ + D R ++ + K + V+ +L S D + Sbjct: 72 YLRDAAERVNTGLDCEEFDPEGR---------IIRADWKNLSVISAYLPSGSSGDERQQA 122 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD------------- 223 L + W+ + + K + F+I GD+N + + Sbjct: 123 KY---RFLDRFGPWIDALMHEHKTTGREFIICGDWNIAHKEIDLKNWKGNLKNSGFLPEE 179 Query: 224 ---------------FWKTID--PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 ++TID P+ + + N IDY + Sbjct: 180 RAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVG------WRIDYQIATPG- 232 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +Y ++ R SDH P++IDYD Sbjct: 233 ---IAARARNVAIYKDE-------RFSDHAPLTIDYD 259 >gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] Length = 256 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 27/159 (16%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + +GK+ ++ + HL + S L + Q K I P ++ G Sbjct: 120 ADSDGKQFYLFNTHL----------DHISEEARLFASQLLLKKAAI---IAENSPVIVLG 166 Query: 210 DFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 DFN + N N + + + IDY + Sbjct: 167 DFNTQPNTPTYNYITEKYQDAQLISQKPAKGPT-GSFHDFHPLRPENELEKIDYIFVS-- 223 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F Y + G SDH P++ + D+ Sbjct: 224 -------NEFQVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|329965398|ref|ZP_08302322.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328522190|gb|EGF49304.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 361 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 43/214 (20%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ +++ ++N+ G + S K + +Y + DI+ LQE Sbjct: 98 TPSARHLKIATYNV----HNFGDEITGYSCK-------EMARYMQQEHVDILCLQE---- 142 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 F N + S + ++H ++RK + YPL+ + Sbjct: 143 ------FGNNRYFTADSIRKALSHWPHVLTLQED---SLRKVLPIAVFSRYPLIHERFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHL-------KSFCFLDS-LENTYSPSCSLLSQQAQ 189 ++ + + +L+ HL K + + A+ Sbjct: 194 YPQSANCSMLCDIVAGTDTVRLLNSHLQTTSVSQKRGKWQREMASDDARREIRAAKDAAE 253 Query: 190 WLKDWITQKK---------ESLVPF--VIAGDFN 212 L ++ P+ ++ GDFN Sbjct: 254 TLHGNFVKRTLQTYTVGYFAKNSPYPVIVCGDFN 287 >gi|163757064|ref|ZP_02164169.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] gi|161322964|gb|EDP94308.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] Length = 277 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 113/318 (35%), Gaps = 62/318 (19%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 KY+L L+ + + + +Q+++++S+NI +EG + W N + K Sbjct: 3 KYLLTLLVVFISFSVT-SQELKIMSYNIKLDYPKEGKNSWMNRKP-------FMVNQIKF 54 Query: 64 LDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + ++ +QE M +++ + + ++AI +K Sbjct: 55 YEPTVLGVQEALPNQMKDLDSL-----LTDYSFVGVGRDDGKNKGE------YSAIFYKK 103 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG-----NRRAVELLVE--INGKKIWVLDIHLKSFCFLD 171 + V+Q S L G NR L + +K WV + H D Sbjct: 104 DELEVVQSSTFWLSETPEKVSMGWDAVCNRMCTYALFQHTKTKQKFWVFNTHF------D 157 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + ++L L I P + GDFN + N+ + D +++ + Sbjct: 158 HVGKEARKNSAVL-----ILNK-IKSANTENYPVFLTGDFNMEPNHE-SIDHITQSLKDS 210 Query: 232 DSLIRF---PKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIK 286 + P+ + + +K + + IDY + + +K+ + + Y Sbjct: 211 KKIAALDFGPEGTFNGFHFDKPVTRR--IDYIFVSKHVKVHKYAVLSDHWNMQYP----- 263 Query: 287 SRGKRLSDHCPISIDYDF 304 SDH P+ I+ Sbjct: 264 ------SDHLPVLIETTL 275 >gi|87122729|ref|ZP_01078604.1| extracellular nuclease-related protein [Marinomonas sp. MED121] gi|86162026|gb|EAQ63316.1| extracellular nuclease-related protein [Marinomonas sp. MED121] Length = 848 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 114/360 (31%), Gaps = 79/360 (21%) Query: 19 SVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSD-------YTLLRQYAKNLDADIVF 70 S +R+ S+N+ L + G + R + T + +DADIV Sbjct: 461 SADGNLRVASFNVLNLFNSPFGGDANAHGDNRGAEESTEYQLQLTKIANAISMIDADIVG 520 Query: 71 LQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-AIAV----RKKN 120 L E+ + +A+A + + +S + +D+ T AIAV R Sbjct: 521 LMEIENNGFGEASAIAALV---DQINTTQAASALPYSYVSAGDDVGTDAIAVGLIYRADV 577 Query: 121 VRVLQQSYP-LLGAKDSFSRAGNRRAVELLVEINGKKIWV-----LDI---HLK---SFC 168 V ++ + + + G + V + K + L I HLK S C Sbjct: 578 VSLVDDAVKIDMPEQHGTDAEGTNFDKYMRVSLLQKFQHIESKRKLSIVVNHLKSKGSAC 637 Query: 169 FLDSL-ENTYSPSCSLLSQQAQW-LKDWITQKKESLVPFVIAGDFN-----RKINYLGNN 221 D+ SC+ A L D+I + ++ GD N + L + Sbjct: 638 IEDTANPEDAQGSCNAFRVSAAVTLGDYIATNVQG--DVLVMGDLNAYGKEDPVRVLTDY 695 Query: 222 DDFW--KTIDPNDSLIRFPKEKDSRCNANKNLRNK----------------------IPI 257 D + I + ++ + + + + Sbjct: 696 DPLTAERKIVTAEQATLNGEDLNGGASVEVSQSYGLTNLVEHFQGAKGYSYTYSGELGSL 755 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-------------SDHCPISIDYDF 304 D+ + + + K ++ I E ++ + SDH P+ I+ D+ Sbjct: 756 DHALANASLMKSIVATDDWHINSAESNLFEYSSQYTGDLVKSDNAYSSSDHDPVIIEIDY 815 >gi|330998076|ref|ZP_08321904.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] gi|329569165|gb|EGG50956.1| endonuclease/exonuclease/phosphatase family protein [Paraprevotella xylaniphila YIT 11841] Length = 336 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 105/333 (31%), Gaps = 74/333 (22%) Query: 22 QKVRLVSWNINTL------SEQEGVSLWKN-----SVKRTTSDYTLLRQYAKNLD----A 66 Q R++ +N+ L S +E + R L + + Sbjct: 24 QPFRVMFYNVENLFDCRHDSLKEDREFLPGGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH--------SKRDSNNDIHTAIAVRK 118 D+V L E+ N +F T R + I A+ + Sbjct: 84 DLVGLCEVE-----------NDSVLFDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQP 132 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTY 177 + R+L+ + + D+ R R + + ++G + VL HL S + + Sbjct: 133 GSFRLLESREITVPSVDAGFR-PTRNVLYVKGRVLSGDTLHVLVCHLPSRLGATRVSRRH 191 Query: 178 SPSCSLLS-QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +L+ + + D I V+ GDFN G+ D+ + ++ Sbjct: 192 ----RMLAARTVSAVADSIRT-VVGDARIVVMGDFN-----AGSEDEVF--LEAFIPYFH 239 Query: 237 FPKEKDSRCN-ANKNLRNK---IPIDYFVMDQ----NAYKFLIQESFS------------ 276 P+ SR + + R + ID+ ++ N+ F + Sbjct: 240 EPELAFSRQSEVKGSYRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCERE 299 Query: 277 -----EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+++D+++ Sbjct: 300 KTYGGVRPFRTYQGPLYKGGYSDHFPVTLDFEW 332 >gi|312129153|ref|YP_003996493.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311905699|gb|ADQ16140.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 293 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 52/251 (20%) Query: 1 MIRKYVLALVFFLVP---CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M R+ + L +P V+ R+++ NI ++ E R ++ Sbjct: 1 MKRRNFIQLSVGALPLLSFKFPVSAGHRIMTCNIR-VALDEDEEKGVGWSSRKKICLDII 59 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--HTAIA 115 +Y DI+ LQE+ A + +S +L+ + + + + IA Sbjct: 60 SKY----KPDIICLQEVLKGQAA-------DFKKHFSGYQLLGFDGPEMDANPVGYHGIA 108 Query: 116 VRKKNVRVLQQ------------SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLD 161 + + ++ PL+ S+ A R A + ++ GK+ V++ Sbjct: 109 -KNPILYSTKKYELISAGTYWLSETPLVAGSKSWDTARARHANWIRLKDKSTGKEFRVIN 167 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFNRKIN--- 216 +HL D + N Q + + I + + L F ++ GDFN + Sbjct: 168 LHL------DHVSNDAK------FHQLKMV---IEEAGQYLPAFPQILCGDFNSRFQSKV 212 Query: 217 YLGNNDDFWKT 227 + + WK Sbjct: 213 FSTPRNAGWKE 223 >gi|295395722|ref|ZP_06805913.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] gi|294971422|gb|EFG47306.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] Length = 261 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 92/314 (29%), Gaps = 86/314 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +R+V+WN+N++ + + + D D++ +QE+ A Sbjct: 1 MRIVTWNVNSVRARA----------------ERIGAFLDRSDVDVLAIQELKCKDAQFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----KNVRVLQQSYPLLGAKDSF 137 VF + + + + +AV +V V + P G D Sbjct: 45 HVFEDRGYEVAF------------HGLNQWNGVAVASRVGLDDVEVGFEGVPGFGDDDQV 92 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A + G + + L + N + + +WL + Sbjct: 93 E------ARAISAVTGGVRTYSLYV-----------PNGRELDHPHYAYKLEWLAQLRNE 135 Query: 198 ---KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + E VPFV+ GDFN + L + + + + ++ N + Sbjct: 136 ALVRLEQDVPFVMCGDFN--VAPLDEDVWDMAAFEGATHVSQPERDA---FNGLISAGLT 190 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL---------------------- 292 F Y F + ++ + + +L Sbjct: 191 EVTRQFTPGPGVYTFWD---YQQLRFPKKQGMRIDFQLASPSLAERATGAFIDREERKGK 247 Query: 293 --SDHCPISIDYDF 304 SDH P+ +DY Sbjct: 248 GASDHAPVWVDYQL 261 >gi|146419034|ref|XP_001485482.1| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 88/315 (27%), Gaps = 41/315 (13%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSW--NINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ K+++ L + ASV + + + NI T S V K +R ++ Sbjct: 4 LVEKFLVFLFVTSLAWAASVQKPLTFRVYDFNIKTASGN-LVPGEKPWSERKAGVIDSIK 62 Query: 59 QYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 Y IV LQE G + + K W F + + Sbjct: 63 NYTSQ-HPTIVGLQEALRGQLDDIMKGLGP-EWKFFGVGGSGDTKGEYCPIIYKSNEWEL 120 Query: 117 RKKNVRVLQQ--SYPLLGAKDSFSR----AGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + L + P G + R A R +G+ I + HL Sbjct: 121 VNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVS------SGRTIHYFNTHLDP--HD 172 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 D + P + GDFN K + P Sbjct: 173 DHVRYESVRDIIT-----------YVNHTRQGSPVFLGGDFNAK-RTSAPYKYVATQMTP 220 Query: 231 N--DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + K+ N+ + ID+ + K + LY S Sbjct: 221 ALIAPDPKGVDNKEKSTNSGFQFNHPKTIDFIFFQDHGSKVKVD------LYEILSSTSG 274 Query: 289 GKRLSDHCPISIDYD 303 +SDH P+ D+ Sbjct: 275 NVVISDHSPVIADFS 289 >gi|221633952|ref|YP_002523178.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] gi|221156684|gb|ACM05811.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] Length = 608 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D Q + L DIV LQE+ S + V + S + + +++D Sbjct: 401 DLEATAQAIERLQPDIVLLQEV-SRGWL--VTSSADQLTWLSRRLGMQAAWGPASDDGLW 457 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 AV Q + + + R AV + + + +WV HL Sbjct: 458 GNAV-----LSHGQPLEIRTTRFRVTENLQRGAVAVRLAPHTGSLWVASTHL-------- 504 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + ++ Q + L ++ + L P V+ GDFN Sbjct: 505 --DDPRQAVTVRLAQIEELLVFL----QPLRPLVLGGDFN 538 >gi|312076146|ref|XP_003140730.1| hypothetical protein LOAG_05145 [Loa loa] gi|307764104|gb|EFO23338.1| hypothetical protein LOAG_05145 [Loa loa] Length = 415 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 95/311 (30%), Gaps = 64/311 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTS--DYTLLRQYAKNLDADIVFLQEMGSY---- 77 +R+VS N + R + LL +Y DIV L+E+ Sbjct: 5 LRVVSLNC-WALPLPWPFRSNDHSLRIKKIGEALLLNEY------DIVALEEVWGEHDFL 57 Query: 78 ---NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPL 130 A+ K+F + + F+S T + R V L + L Sbjct: 58 RLQEALKKIFGYSYY--FHSG---------------FTGSGICVFSRYPIVSTLMHRFTL 100 Query: 131 LGAKDSFSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ- 186 G R + +EI ++ HL + E + L + Sbjct: 101 NGFAHHIHRGDWFAGKGVGLVEIEIEQYRVNFYAAHLHA-------EYNPNKDLYLPHRL 153 Query: 187 -QAQWLKDWITQKKESLVPFVIAGDFN---RKINYL-----GNNDDFWKTIDPNDSLIRF 237 QA L ++ S ++AGDFN + Y N D W + Sbjct: 154 AQAFELAQFVKHTSYSADALILAGDFNIEPDNLAYQLIVQNANLRDAWIQKPNSCDDCGA 213 Query: 238 PKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + C + +NK +DY M ++ + + + D KS S Sbjct: 214 TFGRLDNCYTPQRFKNKKNYGKRLDYI-MYRSGRSKIELKLCEIRMNRIHDQKSINY--S 270 Query: 294 DHCPISIDYDF 304 DH + ++ Sbjct: 271 DHVGVYAEFSL 281 >gi|86604847|ref|YP_473610.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-3-3Ab] gi|86553389|gb|ABC98347.1| endonuclease/exonuclease/phosphatase family protein [Synechococcus sp. JA-3-3Ab] Length = 635 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 109/344 (31%), Gaps = 77/344 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK----RTTSDY----TLLRQYAKNLDAD 67 +V +++ S+N+ G + N+ + R +++ + + + +DAD Sbjct: 106 TPPAVGGSLKVASFNLFNYFNTFGNICFPNNSECRGARNAAEFTRQRDKIIEAIRRMDAD 165 Query: 68 IVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 IV L E+ + N + +V T+ + + I Sbjct: 166 IVGLNELENDGYGPNSSIQDLVNGLNQVMGPGTYAFVDVGVANLG------GDAITNGFI 219 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAG----NRRAVELLV-EINGKKIWVLDI-HLKS-FC 168 + V + + P ++ +R + + + + I+ + + HLKS Sbjct: 220 YKPATVEIAPGTNPAFLDTGELTQDPSLRRHRPPLAVTFRQKSNNAIFTVVVNHLKSKGS 279 Query: 169 FLDSLENT-YSPSC---SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNND 222 D ++N + +C + Q + L W++ + +I GD N Y Sbjct: 280 PCDPVDNDPFQGNCNGNRRRAAQ-EILN-WLSTNPTGSTDPDVLIIGDLN---AY----- 329 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRN-----KIPIDYFV--------MDQNAYKF 269 D + + + N + +D+ + + +A Sbjct: 330 ------AKEDPIKVLEEGGFTNLNGPNSYSFSFQGQWGSLDHALANASLRPQVTGSAKWH 383 Query: 270 LIQESFSEILYNEDDIKSRGKRL---------SDHCPISIDYDF 304 + + + Y + + L SDH P+ + + Sbjct: 384 INADEPVSLDYTTSFKSASQQSLFYAPDPFRSSDHDPVIVGLNL 427 >gi|209542628|ref|YP_002274857.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] gi|209530305|gb|ACI50242.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] Length = 258 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 82/309 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + +R + + + D++ LQE+ +A Sbjct: 1 MKIASWNVN------------SVRQRQ----AHVLDWLEREKPDLLGLQEIKCEDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 FP + R + + +A+ + V ++ P L + +R Sbjct: 42 FPAEAF-------RAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 91 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E G + +++L + S + E+ Sbjct: 92 ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAFMEALALHAR------ALLEAG 139 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 FV+AGD+N R++ +LG D + + P+ Sbjct: 140 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDAL-RALHPHGRY 198 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F + + + ID+ ++ + L D + + SD Sbjct: 199 YTF-WDYQAGAWPRDC---GLRIDHALLSPRIAERLDSAQ-------PDRDERGRAQPSD 247 Query: 295 HCPISIDYD 303 H P+ I D Sbjct: 248 HVPLVITLD 256 >gi|315445296|ref|YP_004078175.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] gi|315263599|gb|ADU00341.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] Length = 263 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 92/307 (29%), Gaps = 82/307 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---- 79 ++LV++NI D LDADI+ LQE+ S A Sbjct: 1 MKLVTFNILHGRTPGA-----------EVDLDRFVDCVAGLDADILALQEVDSIQARSGL 49 Query: 80 ------VAKVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126 A+ + + + + + +A+ + V Q Sbjct: 50 ADLTALAAEAMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVA 109 Query: 127 -------SYPLL---GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 +PL K R AV + ++ V + HL + Sbjct: 110 RLPRIPFPFPLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHL------SFVPGW 163 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 L + + L P+++ GD +N W + S Sbjct: 164 NRYQLHHLMRDVRGL----------PSPWIVTGD----LNMPAKPARRWSRLHCLASAPT 209 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 FP ++ +R +D+ + D+ A F+ Y+ ++ +SDH Sbjct: 210 FPADRPTRQ-----------LDHVLTDEPA--------FTIRSYDTPEM-----AISDHR 245 Query: 297 PISIDYD 303 P+ +D + Sbjct: 246 PLVVDLE 252 >gi|187476631|ref|YP_784654.1| endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] gi|115421217|emb|CAJ47722.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] Length = 286 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 34/157 (21%) Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRK-- 118 L D+VFLQE+ N + H + ++ A AVR Sbjct: 34 LRPDLVFLQEVQGRNETTSML-------------HAQHESLAAALRLNVAYGCNAVRAAT 80 Query: 119 KNVRVLQQSYPLLGAKDSFS---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + L Y ++ + R R + +++ G ++ L +HL F S + Sbjct: 81 DHGNALLSRYDIVDHVNQDISDHRLEQRGLLHARIDVGGTEVHCLVVHL--GLFASSRQ- 137 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +Q Q L + I + P +IAGDFN Sbjct: 138 ----------RQIQALTERIRAEVPDGAPLIIAGDFN 164 >gi|146305200|ref|YP_001185665.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145573401|gb|ABP82933.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 290 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 85/279 (30%), Gaps = 65/279 (23%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SW L G + + +D+ D+V LQE+ + + + Sbjct: 57 SW--QHLLPHAGRAGNLQRIGDLLADF------------DLVALQEVDGGSLRSGYVNQV 102 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 + + + + + N ++ A V + P L R A+ Sbjct: 103 EY---LAQQGAFPYWYQQLNRNLGR-FAQHSNGVLSRLR--PTLLEDHPLPGPPGRGAIF 156 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 L + + V+ +HL ++Q +I ++ V+ Sbjct: 157 LQLGEGEHALCVVMMHLALGA-------------RTRTRQL----AYIRERVGEFRHLVL 199 Query: 208 AGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 GD N L N I P FP + RC +D+ ++ Sbjct: 200 MGDMNTHAVDLLENSPLRDLGLIAPQAEAT-FPSWRPQRC-----------LDHILLS-- 245 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 SE+ D+ S+ +SDH P++++ Sbjct: 246 ----------SELELGRVDVLSQP--ISDHLPVAVEIRL 272 >gi|304310166|ref|YP_003809764.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] gi|301795899|emb|CBL44100.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] Length = 277 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 88/263 (33%), Gaps = 51/263 (19%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---R 117 + D+V +QE + + ++ +F + + D+ ++ +AV R Sbjct: 42 IQKRQPDVVCIQE--TKAQLHQL------DVFITDIPGYHSYFFDAQKKGYSGVAVYCKR 93 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + + V +P+ + + ++++ + V ++L S D + Sbjct: 94 EPDRVVRGLGFPIADDEGRY------------LQVDFGDLSVASLYLPSGSASDEAQEKK 141 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-- 235 L +K W +++ +++ GD+N I + + W++ N + Sbjct: 142 Y---RFLDTFLPMMKAW---RED-GRRYILCGDWN--IAHKNIDIKNWRSNQKNSGFLPE 192 Query: 236 ---RFPKEKDSRCNANKNLRNKIPIDYFV------------MDQNAYKFLIQESFSEILY 280 + D + + D + + ++ + + Sbjct: 193 ERAWLDRVFDEQGWVDAFRAVNSEADQYTWWSNRGQAWAKNVGWRIDYQIVSPELRDTIS 252 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 + + K R SDH P+ + YD Sbjct: 253 STEIYKDE--RFSDHAPLLMSYD 273 >gi|257415059|ref|ZP_05592053.1| endonuclease/Exonuclease/phosphatase [Enterococcus faecalis AR01/DG] gi|257156887|gb|EEU86847.1| endonuclease/Exonuclease/phosphatase [Enterococcus faecalis ARO1/DG] Length = 198 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 33/191 (17%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173 N + + +D +R V ++ + GK I V+ +HL L Sbjct: 38 HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL-------GL 90 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + Q L +W+ + + P ++AGDFN D + + Sbjct: 91 REAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN---------DWR-QKANHPLK 133 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + E +R + + +D+ K + + + + LS Sbjct: 134 VQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALP------LRTWRHLS 187 Query: 294 DHCPISIDYDF 304 DH P+S + Sbjct: 188 DHAPLSAEIHL 198 >gi|228989540|ref|ZP_04149525.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|229003360|ref|ZP_04161190.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757978|gb|EEM07193.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228770265|gb|EEM18844.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 263 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 57/194 (29%), Gaps = 31/194 (15%) Query: 50 TTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAVAKVFPKNTWC----IFYSTERLINHS 102 + +R AK + D++ LQE+ V + + + Sbjct: 13 EENQIEKIRHLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKDNFGLVLLAELEKLGSG 72 Query: 103 KR-------DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 DI+ A+ K+ V Q S+ + +KD+ R+ V V G Sbjct: 73 NYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESKDTSY-WKARKIVSATVSYKG 131 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 K + HL + D E Q L Q ++ GDFN Sbjct: 132 KNMTFYSCHL--GWWNDEEE--------TFQGQVDCLT----QHVNENELSILMGDFNNN 177 Query: 215 INYLGNN-DDFWKT 227 G D + Sbjct: 178 ARLQGEGYDYLMQK 191 >gi|71903215|ref|YP_280018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS6180] gi|71802310|gb|AAX71663.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS6180] Length = 910 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 98/322 (30%), Gaps = 57/322 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 K+ + S+NI S + + + S L DI+ L E+ Sbjct: 548 KLSIASYNIENFSANPSSTKDEKVKRIAESFIHDLNA------PDIIGLIEVQDNNGPTD 601 Query: 75 ----GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAI---------- 114 + + ++ T+ + N +I T Sbjct: 602 DGTTDATQSAQRLIDAIKKLGGPTYR-YVDIAPENNVDGGQPGGNIRTGFLYQPERVSLS 660 Query: 115 -----AVRKKNVRVLQQSYPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSF 167 R V + +G D + A R+++ G+K+ V+ HL S Sbjct: 661 DKPKGGARDALTWVNGELNLSVGRIDPTNAAWKDVRKSLAAEFIFQGRKVVVVANHLNSK 720 Query: 168 CFLDSLENTYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 D+ + S+Q A L + + + V+ GDFN Sbjct: 721 -RGDNALYGRVQPVTFKSEQRRHVLANMLAQFAKEGAKHQANIVMLGDFNDFEFTKTI-- 777 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + I+ D + + S + + N +D ++ ++ L+ ++++ Sbjct: 778 ---QLIEEGDMVNLVNRHDISDRYSYFHQGNNQTLDNILVSRH----LLDHYEFDMVHVN 830 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 R SDH P+ + F Sbjct: 831 SPFMEAHGRASDHDPLLLQLSF 852 >gi|77461257|ref|YP_350764.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1] gi|77385260|gb|ABA76773.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 78/257 (30%), Gaps = 46/257 (17%) Query: 57 LRQYAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ AD+VFLQE+ + S + + + Sbjct: 46 LREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPTMPQYEFLADSLWPQFAYGRNAVYPEG 105 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 AV K ++++ + +R L + + +++ + +HL Sbjct: 106 DHGNAVLSK-FQIVRHDNLDVSISGHENRGLLH--CVLRLPGDDREVHAICVHL------ 156 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L ++ + Q LK + + P ++AGDFN D Sbjct: 157 -GLRESHRNA------QLALLKKRLAEL-PEDAPVIVAGDFN---------DW-----RQ 194 Query: 231 NDSLIRFPKEKD---SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + P + + + +D+ L + Sbjct: 195 RADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKASQPKVL------ANR 248 Query: 288 RGKRLSDHCPISIDYDF 304 LSDH P+S++ + Sbjct: 249 PWSHLSDHAPLSVEIEL 265 >gi|296875948|ref|ZP_06900007.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] gi|296433023|gb|EFH18811.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] Length = 270 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 48/206 (23%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90 + L+ + +N+ ++ + L++ D++ QE+ A V + Sbjct: 1 MKFLTLNSHSWMEENAQQK----FETLKEQILEAQYDVICFQEVNQEMASETVETDEYYQ 56 Query: 91 -----IFYSTERLIN-----------------HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + ++ + ++ +AV + L+ Sbjct: 57 AAPSAVAIHKDHFVHVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADE 114 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L+ D + RR ++GK+I V +HL + D Q Sbjct: 115 ILVSNMDDPTDYHTRRVAVAHTSVDGKEIVVGSVHLS---WWDKG------------FQF 159 Query: 189 QW--LKDWITQKKESLVPFVIAGDFN 212 +W ++ + Q ++ PF++AGDFN Sbjct: 160 EWPRIEKYFNQVEK---PFILAGDFN 182 >gi|222148978|ref|YP_002549935.1| exonuclease III [Agrobacterium vitis S4] gi|221735964|gb|ACM36927.1| exonuclease III [Agrobacterium vitis S4] Length = 264 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ ++ DIV LQE+ S + + Sbjct: 1 MKIATWNIN------------GVKAR----LANLCQWLESSSPDIVCLQEIKSVD---EG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + + +A+ K D +R Sbjct: 42 FPRAE-------IEALGYHVETHGQKGFNGVALLSKIRPDEVNRGLPGDEADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + + V ++L + + + L+ A+ L+ + + Sbjct: 92 --IEGVFSVADGVLRVCSLYLPNG----NPSDDPVKYPYKLAWMAR-LQRFAADRLALEE 144 Query: 204 PFVIAGDFNRKINYLGNND----DFWKT----IDPNDSLIR------FPKEKDSRCNANK 249 P ++AGD+N +D W T + + + + +A K Sbjct: 145 PLILAGDYN---VIPHPHDCFDPAVWATDALFLPQTRAAFQALENLGLTDAVRATTDATK 201 Query: 250 NLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ID+ ++ A L+ + + ++ SDH P Sbjct: 202 LYSFWDYQAGAWQKNNGIRIDHLLLSAEATDRLVSTEIEKHV-------RSWEKPSDHVP 254 Query: 298 ISIDYDF 304 + ++F Sbjct: 255 VIGYFNF 261 >gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S] Length = 256 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----- 254 P +I GDFN + + I + +K ++ + Sbjct: 157 AENSPVIILGDFN-----TEPDTPTYNFITKKYQDAQLISQKRAKGPIGSFHDFRPLRPI 211 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + F Y + G SDH P++ + D+ Sbjct: 212 NELEKIDYIFVS---------KEFQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|319788284|ref|YP_004147759.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317466796|gb|ADV28528.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 22/163 (13%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVA-KVF---PKNTWCIFYSTERLIN--HSKRDSNND 109 LR+ + + ADIVFLQE+ +A + P+ + + + + Sbjct: 37 RLREAIRRVGADIVFLQEVQGRHADRERSVHQWPETPQYEYLADTLWPQFAYGRNAVYPH 96 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 H A+ + V + +R EL + + + + + +HL Sbjct: 97 GHHGNALLSRLPIVRH-DNHDVSVAGHENRGLLH--CELELPGHPQHLHAICVHL----- 148 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 L + + S Q L + ++ + P V+AGDFN Sbjct: 149 --GLRDAHRRS------QVGLLGALLREQVPADAPVVVAGDFN 183 >gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI] gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar anthracis str. CI] Length = 788 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|237654298|ref|YP_002890612.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] gi|237625545|gb|ACR02235.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] Length = 249 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 54/261 (20%) Query: 57 LRQYAKNLDADIVFLQEM------------GSYNAVAKVF-PKNTWC-IFYSTERLINHS 102 LR ++LDAD+VFLQE+ F ++ W I Y + +H Sbjct: 26 LRDRLRSLDADLVFLQEVQGLHLGHPARHPDWPALPQHEFLAEDAWQQIAYGGNAIYDHG 85 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 + AI R + Q F R G E+ + + + + Sbjct: 86 HHGN------AILSRHLILSTANQDVSD----HRFERRGLLH-CEVQLPEFDVPVHCVCV 134 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + + +Q + L + + + P +IAGDFN ++ D Sbjct: 135 HL------GLMAGSRR-------RQMEALAERMEELAPGNAPLIIAGDFN---DWRNRAD 178 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 D + + +R + + +D + F Sbjct: 179 DLLGRRLGLAEAFGSGRGRPARSYPSTLPFFR--LDRIYV----------RGFRVRQAQV 226 Query: 283 DDIKSRGKRLSDHCPISIDYD 303 + R+SDH ++ D + Sbjct: 227 HY-GAPWARISDHAALTADLE 246 >gi|30248098|ref|NP_840168.1| hypothetical protein NE0067 [Nitrosomonas europaea ATCC 19718] gi|30179983|emb|CAD83978.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 274 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 35/235 (14%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + + + ++NI +G+S + + LR LD D+VFLQE+ +A Sbjct: 25 TGRTLHIATYNI-----HKGLSFFNQRLI-----LHELRDQLHGLDVDVVFLQEVVGEHA 74 Query: 80 VA----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + + +P+NT F + + + K H A+ + V + + A Sbjct: 75 LHATRFRDWPRNTQYEFLADSMWPDFAYGKNAVYGHGHHGNAILSRFSIVNWE-NEDISA 133 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 SR + + + + + +HL S QQ + ++ Sbjct: 134 HRFESRGLLHCELAIPGWKD--TLHCICVHL--------GLFRRGRS-----QQLEAIEK 178 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 I Q P V+AGDFN ++ G + + + + K +R + Sbjct: 179 RIRQLVSPDAPLVVAGDFN---DWRGAANPLLASRLNLVEVFQHTHGKAARSFPS 230 >gi|329119607|ref|ZP_08248288.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] gi|327464204|gb|EGF10508.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] Length = 276 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 41/194 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + Q +++ +WN+N+L+ + ++ + DI+ LQE Sbjct: 9 TAPQTMKIATWNVNSLNVR----------------LPQVQNWLAEHQPDILALQE----- 47 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + ++ S + +A+ L + + + Sbjct: 48 -----LKLDQDKFPAAALAMMGWQCAWSGQKTYNGVAI-----VSLHPLHDVRTGLPALP 97 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 RR + + + V++++ + DS + Y Q L +++ + Sbjct: 98 DDPQRRVIAATI----GGVRVINVYCVNGEAPDSPKFQYK------KQWFAALTEFVRGE 147 Query: 199 KESLVPFVIAGDFN 212 V+ GDFN Sbjct: 148 LARHDKLVLLGDFN 161 >gi|254495900|ref|ZP_05108809.1| endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] gi|254354882|gb|EET13508.1| endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] Length = 221 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 24/162 (14%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAK----VFPKNTWCIFYSTERLINHSKRDSNNDI-- 110 +R+ L+ D VFLQE+ + + +P + C + + +++ + Sbjct: 1 MREAITELNPDFVFLQEVQGEHRKRQKRINAWPDSPQCEYIAENIWPHYAYAKNAIYQSG 60 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K + L + R +R + + ++G + +L +HL Sbjct: 61 HHGNAILSKYAFRRIDNINL-----ASIRRASRGILHAQLMVDGATVHLLCVHL------ 109 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + +QA L I + P ++AGDFN Sbjct: 110 --GLFKRERA-----EQATALMRRIKEVVPLNEPLLMAGDFN 144 >gi|37993813|gb|AAR06984.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 +A ++ N + + ++ + + D AI + V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK 214 + Q + ++D+I K +V+ GD N Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVN 226 >gi|325108266|ref|YP_004269334.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324968534|gb|ADY59312.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 320 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 30/198 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWK--------NSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++ + WN+ L ++ + +R D + ++L+ADI+ L E+ Sbjct: 32 QITVAFWNVQNLLDEFDDPDLPHDEAFPVNSVRERMGKD----AEVIRHLNADILGLAEV 87 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + + ++ + S E + + + + L +P A+ Sbjct: 88 ENRALLNRLVKG-----YLSNEGYKHVVLIEGEDS--------RGIDVALLSRFPCF-AQ 133 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R + + G+ +V+ H KS D + Q+ + Sbjct: 134 SVDIEGLPRDLLACRFSMRGQVFYVVVNHWKS--RRDGGGGDVRLNGGRAMQEF--VSRT 189 Query: 195 ITQKKESLVPFVIAGDFN 212 + + + VP + GDFN Sbjct: 190 VREYEGQAVPVIAMGDFN 207 >gi|114762656|ref|ZP_01442090.1| endonuclease/exonuclease/phosphatase family protein [Pelagibaca bermudensis HTCC2601] gi|114544566|gb|EAU47572.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. HTCC2601] Length = 333 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 99/340 (29%), Gaps = 66/340 (19%) Query: 24 VRLVSWNINTLSE--QEGVSLWKNSVKRTTSDY------TLLRQYAKNLDADIV------ 69 +RL ++NI + L + D L +DAD V Sbjct: 1 MRLATYNIEWFDALFDDAGQLLNDDGWSARHDITRQQQTEALGIVFTAMDADAVMIIEAP 60 Query: 70 -----------------FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 E+ + + + I + + + Sbjct: 61 DSNSRRDTDRALKTFAEAF-ELRTRDVLTGFVNDTQQEIALLYDPSVFTVRHAPGESSD- 118 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A R +V + K SFS+ V +GK + ++ HLKS + Sbjct: 119 --APRFDHVFHIDLDIDATRDKVSFSKPPLEIEA---VTASGKVLRLIGAHLKSKAPHGA 173 Query: 173 LENTYSPSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNND 222 ++ ++ QA WL+ + E ++ GD N + +L Sbjct: 174 RTRDQIMRLAIANRRKQLAQAIWLRRRVEALLEEGESVIVMGDLNDGPGLDEYEHLFGRS 233 Query: 223 DFWKTIDPNDSLIRFPKE------------KDSRCNANKNLRN-KIPIDYFVMDQN---- 265 + + P +R R + +DY ++ ++ Sbjct: 234 SVEIVLGDGGPPLFDPHAERALASKFGAQPTTARFYLKPEKRYMQAMLDYIMVSEDLART 293 Query: 266 AYKFLIQESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I F + + + +++ SDH P+++D D Sbjct: 294 RPSWRIWHPFDDPVCWRTPELREALLDASDHFPVTLDIDL 333 >gi|312130303|ref|YP_003997643.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311906849|gb|ADQ17290.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 363 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 86/258 (33%), Gaps = 55/258 (21%) Query: 65 DADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 +ADI QE Y+ + + KN + ++ HS++ ++ T Sbjct: 138 NADIKCFQEFYNDSKNFDYDLIRRTAEKNPYYVYM-------HSQQGNDKGQGT------ 184 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTY 177 YP++ ++ + N + + +NG I V++ LKS ++ + + Sbjct: 185 -IGLATFSIYPIIRKEEMYWPTNNNGLLSTDIVVNGDTIRVINFQLKSMGIRVNKVFDHG 243 Query: 178 SPSCSL---LSQ----------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 L Q + L+ WI +S P +IAGD N ++ Y Sbjct: 244 LNKVETKNILVQLKNGFSERGNEVNILESWIN---KSPYPVIIAGDLN-ELPYGY----- 294 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 L R + + + +D +F E F + + Sbjct: 295 -----AYGKLRRLLLNAFEEEGRGFGFTYRKILRFLRIDN---QFFEAEKFKIVRFKT-- 344 Query: 285 IKSRGKRLSDHCPISIDY 302 + SDH P+ +Y Sbjct: 345 --LHEYKYSDHYPLLGEY 360 >gi|260828432|ref|XP_002609167.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae] gi|229294522|gb|EEN65177.1| hypothetical protein BRAFLDRAFT_92542 [Branchiostoma floridae] Length = 429 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 100/302 (33%), Gaps = 43/302 (14%) Query: 25 RLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-NA 79 R++ WNI LS+ + V ++ + +L + + D+D++ QE+ Y + Sbjct: 146 RVMQWNILAQALSQADDSFVRCPPAALNWDVRKFRILEEI-RTYDSDVLCFQEVDHYHDF 204 Query: 80 VAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + + +FY ++N A+ +K ++ +L ++ + Sbjct: 205 LEPALKSLGYRGLFYPKPDSPALYCPNNNGPDGCALFFKKDKFSLVDADGIVLSSRGFET 264 Query: 139 RAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 A + K + HLK+ + L + L +Q Q Sbjct: 265 NQVALFAKLQFSDPSTGGAKPFVLGVTHLKARKGWERLRSEQGKD---LLKQTQKFSG-- 319 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-----NDSLIRFPKEKDSR-----C 245 P V+ GDFN + + + N + +K S Sbjct: 320 -----KGTPVVLCGDFN-----AEPTEHVYSVMSQSKMKLNSAYKSLSDDKTSEPVYTTW 369 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE---DDIKSRGKRLSDHCPISIDY 302 + + +DY ++ ++ E+ EI E + SDH +S+ Sbjct: 370 TVRTDGEWRQTLDYIFFSKDKFQV---ETCLEIPPEELVGETRLPSHTYPSDH--LSLVC 424 Query: 303 DF 304 DF Sbjct: 425 DF 426 >gi|159491237|ref|XP_001703579.1| predicted protein [Chlamydomonas reinhardtii] gi|158270653|gb|EDO96491.1| predicted protein [Chlamydomonas reinhardtii] Length = 598 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 28/214 (13%) Query: 8 ALVFFLVPCTASVA----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 A + +P A +R+ + N+ +L + Sbjct: 22 ACLGLTLPAGTGAAFGPPHPLRIATHNMQSLRLPGAARRVAAAAL-----------IWAE 70 Query: 64 LDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 L DI+ LQE A + + + S ++ S A VR+ Sbjct: 71 LRLDIICLQETHWTCRADQAAFEQTLQLIAYELHLSGWKVTGAQWSTSRATAGVAFLVRQ 130 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + P L + AG R AV L + G+ I + + + F + + Sbjct: 131 ELWESSTITAPALSPVPTAMLAG-RLAV-LKLRWGGRSITIANTY-----FPAASTHAAE 183 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + L Q + + ++ + + AGDFN Sbjct: 184 QAKRELISQLRT-QAALSAAATAGEVVIWAGDFN 216 >gi|1185049|gb|AAB39273.1| nuclease [Aeromonas hydrophila] Length = 1070 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 53/242 (21%) Query: 16 CTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDAD 67 + A +R+ S+N +N + G + R T ++ + L+AD Sbjct: 469 PELAAAGDLRVASFNVLNFFTTVVGGDANPTNSNRGALTVGEFELQRTKIVSAITRLNAD 528 Query: 68 IVFLQEMGSYN-----AVAKVFPK---------NTWCIFYSTERLINHSKRDSNNDIHTA 113 +V L E+ A+A + + + +S + + + I Sbjct: 529 VVGLMEIEDNGYGNNSAIANLVGALNAALPDEQDHYAFVHSPDDQPMGT-----DAITVG 583 Query: 114 IAVR------KKNVRVLQQSYPLLGAKD-----SFSRAGNRRAV--ELLVEINGKKIWVL 160 + R + +++ + A D R G R ++ + ++ Sbjct: 584 LIYRPAKVSLEGAAQLIPLPLQVAEAVDGADKPVSIRQGMRDSLLQRFTSPKGDVPLTLV 643 Query: 161 DIHLK---SFCFLDSLEN------TYSPSCSLLS-QQAQWLKDWITQKKESLVPFVIAGD 210 HLK S C+ D + C+ L A+ L + + Q ++ GD Sbjct: 644 VNHLKSKGSACYEDYPDYVTADPLDGQGHCNALRVSAAKVLGERLKQ---EPGDLLVIGD 700 Query: 211 FN 212 N Sbjct: 701 LN 702 >gi|169838781|ref|ZP_02871969.1| Endonuclease/exonuclease/phosphatase [candidate division TM7 single-cell isolate TM7a] Length = 245 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 91/252 (36%), Gaps = 50/252 (19%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAI 114 + ++ D+V L E+ +++ +N + R N + + + + Sbjct: 34 RIGKFINRYKPDLVGLVEVD--LGSFRMYSRNQATLLGRITRNNNVYQYKYEEDSQYMKF 91 Query: 115 -AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 VRK+ +L + P+L + + G ++ L++E+ + + V +HL Sbjct: 92 PMVRKQGNALLSK-NPILREEFHYLDIGMKK---LIIEVETEDVIVFLVHLALGG----- 142 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 +Q L D + P ++AGDFN FW + Sbjct: 143 --------KTRQKQIVQLYDLVK---NCKKPVIVAGDFN----------VFWGEEEIEMF 181 Query: 234 LIRFP-KEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 L K ++R + + K +D+ + K + S+ I + Sbjct: 182 LQASDLKNINTRKDPTFPSWNPKRELDFILCS----KEIKVNSYEVI----------QTQ 227 Query: 292 LSDHCPISIDYD 303 LSDH PI ID+D Sbjct: 228 LSDHLPILIDFD 239 >gi|52144875|ref|YP_081954.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] gi|51978344|gb|AAU19894.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] Length = 263 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 70/225 (31%), Gaps = 32/225 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 ---------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTY-WKTRKIVSATIAYNGKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ +S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 185 YEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 788 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 93/317 (29%), Gaps = 55/317 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWITQ------KKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + Q KK + P V+ GD N + I Sbjct: 658 GKVQPLVLKSEEKRIQLAQEVNQFVQGIQKKNTNAPVVVLGDMN-DFEFAKP-----LKI 711 Query: 229 DPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 +L N +D+ ++ N + + + ++ +I Sbjct: 712 LEGTNLKNMLNTVPKENRYTYIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMK 767 Query: 288 RGKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 768 EHGRVSDHDPVLAQIDL 784 >gi|30018623|ref|NP_830254.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218231797|ref|YP_002365209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228956830|ref|ZP_04118615.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229042269|ref|ZP_04190021.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|229125865|ref|ZP_04254890.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|229143158|ref|ZP_04271590.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296501195|ref|YP_003662895.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] gi|29894164|gb|AAP07455.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218159754|gb|ACK59746.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228640239|gb|EEK96637.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228657523|gb|EEL13336.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228727060|gb|EEL78265.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228802871|gb|EEM49704.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322247|gb|ADH05175.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] Length = 263 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLKGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|172061100|ref|YP_001808752.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] gi|171993617|gb|ACB64536.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] Length = 271 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 87/310 (28%), Gaps = 69/310 (22%) Query: 13 LVPCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 A +++ +WN+N+L+ ++ + + + D++ L Sbjct: 2 AAFAFTPHAFPFMKIATWNVNSLNVRK----------------QHVLDWIAHSGTDVLCL 45 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ P + + I + + + +A+ ++ + +S + Sbjct: 46 QELK--------LPDEKYP--RADLEAIGYRSWFTGQRTYNGVAILARDTLAVDESDIVR 95 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 AV + + + ++ + + DS + Y Q L Sbjct: 96 NIPGFDDPQQRVIAVTV------EGVRIVSAYFPNGQSPDSDKFVYK------MQWLDAL 143 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDS------LIRFPKEKDSR 244 W++ + + + GD+N +D W+ + Sbjct: 144 HAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAKLLELGFVDA 203 Query: 245 C----NANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K ID+ ++ + + D + Sbjct: 204 FRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPAL-------AANCTSCEVDRLPRT 256 Query: 289 GKRLSDHCPI 298 ++ SDH P+ Sbjct: 257 WEQPSDHTPV 266 >gi|253996227|ref|YP_003048291.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] gi|253982906|gb|ACT47764.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] Length = 251 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 71/203 (34%), Gaps = 46/203 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 +R+ ++NI +G++ + T+ R+ + L AD+VFLQE+ Sbjct: 4 TLRIATFNI-----HKGLTHFN-----TSLSLHHQRELLRKLHADVVFLQEVRDVHHEHS 53 Query: 77 ------YNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A F +T W + + + + N + ++ N+ + S Sbjct: 54 RRFDAWPTAGQMEFLADTIWKDYAYGKNAVYPAGHHGNALLSKFPIIKTTNIDISAHSSE 113 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G E+ + + + +HL F QQ Sbjct: 114 ERGMLH----------SEINIPNWDTPLHTICVHL--GLFARWR-----------KQQLI 150 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 +KD+I + + P ++AGDFN Sbjct: 151 LIKDYIQRHIPAHSPLIVAGDFN 173 >gi|37993819|gb|AAR06988.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 21/201 (10%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++++ N+ LS L+ N + +D Y K + D+V L E+ +A ++ Sbjct: 37 LKVMTHNVYMLSTN----LYPNWGQSQRADLIGAADYIK--NQDVVILNEVLDNSASDRL 90 Query: 84 FPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + N S+ +A+ K V + Y Sbjct: 91 LGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKVQYVFANGC 150 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + V ++ N + + V+ HL++ DS+ SP+ S+ + Q + ++D+ Sbjct: 151 GPDNLSNKGF-VYAKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTNQLKEIQDF 205 Query: 195 ITQKKESLVPFVIA-GDFNRK 214 I K +V+ GD N Sbjct: 206 IKNKNIPNDEYVLFGGDMNVN 226 >gi|327404572|ref|YP_004345410.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327320080|gb|AEA44572.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 580 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 95/353 (26%), Gaps = 85/353 (24%) Query: 8 ALVFFLVPCTASVAQ--KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + A+ AQ +R+VS+N+ N+ +D LR+ + L Sbjct: 5 LLALLMAFGIAASAQMVPLRIVSYNLLNFPNGRNDCGGGNTNLPNRAD--TLRKIMQYLK 62 Query: 66 ADIVFLQEMGSYNAVA-------KVFPKNTWC--IFYSTERLINHSKRDSNNDIHTAIAV 116 DI+ E+ + VF + F S N S D N + Sbjct: 63 PDILAGCEIQTAAGCDSVLNRSLNVFGTTYYQRAAFIS-----NSSGGDLQNMLFY---- 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-------VLDIHLKSFCF 169 + + +Q G +D L V N V HLK+ Sbjct: 114 NSNKLTLKEQRIIQTGVRDINH-------YILYVNDNTLPQHHDTCFIEVFMCHLKAGSA 166 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------RKI---NY 217 ++Q L+ + + + F + GD N + + Sbjct: 167 SAEQATR--------AEQTALLRTVLDARPQGRHLF-VCGDLNTYRSSEVCYQNLITGGA 217 Query: 218 LGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---- 268 D W ++ + D+ ++ QN Sbjct: 218 SSLKDPINISGNWTNNSSFAAIHTQSPRVSGSTDCGVTGGLDDRFDHILVSQNVMNGANL 277 Query: 269 -FLIQESFSEI-----------------LYNEDDIKSRGKRLSDHCPISIDYD 303 S+ I Y + +++ SDH P+ +D Sbjct: 278 LQYTTSSYKAIGNDGNHYNQSLLTGTNSQYPDSVVRALYYS-SDHLPVKLDAT 329 >gi|304383804|ref|ZP_07366262.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] gi|304335060|gb|EFM01332.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] Length = 325 Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 49/263 (18%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK-NVRVL 124 D+V L E+ + + + + N + T A R+ +V +L Sbjct: 80 PDVVALCEVEN-------------DTVMTDLTKKSLLRAAGYNYVMTHSADRRGMDVALL 126 Query: 125 QQSYPLLGAKDSF----SRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENT 176 +D G R ++L G + ++ +H S + Sbjct: 127 YSPATFAPIRDCTFRVPPPEGMRPTRDILYVAGRLPAGDTLHIIVVHAPSRMGGEPQTRP 186 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 Y C ++Q + D I +++ +IAGDFN + K + Sbjct: 187 YR--CK-VAQCIVAVTDSI-RRQSPEAKILIAGDFNDYSDNEAVRSIVAKGMAD------ 236 Query: 237 FPKEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL- 292 + + A R +D+ + F+ + ++ + +D + G R+ Sbjct: 237 VSEHATGKQGAGGTYRYQGQWGSLDHLFASPSLLPFIQECYINDAPFLTEDDPTYGGRMP 296 Query: 293 -------------SDHCPISIDY 302 SDH P+ + Sbjct: 297 HRSFRGTRYVGGISDHLPLVVHL 319 >gi|239927938|ref|ZP_04684891.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291436275|ref|ZP_06575665.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291339170|gb|EFE66126.1| exonuclease [Streptomyces ghanaensis ATCC 14672] Length = 259 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 88/301 (29%), Gaps = 62/301 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE AKV Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQE-------AKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + + +A+ + L G R Sbjct: 38 ---AEDRFPFEELRELGYESAVNATGRWNGVALLSRVGLEDVVKG-LPGDPGYEGSEEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + V +++ + +D Y Q + LK + Sbjct: 94 A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGER 142 Query: 204 PFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 PF + GD+N +DD ++ + R + + + + Sbjct: 143 PFAVLGDYN----VAPTDDDVYDRAAFEGLTHVTPAERAALASLRETGLSDIVPRPLKYE 198 Query: 259 YFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + ++ + + + S R SDH P+ +D D Sbjct: 199 HPFTYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYVDREERKGKGASDHAPVVVDLD 258 Query: 304 F 304 Sbjct: 259 L 259 >gi|307153787|ref|YP_003889171.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] gi|306984015|gb|ADN15896.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] Length = 264 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 96/314 (30%), Gaps = 85/314 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE--MGSYNAV 80 +++ +WN+N++ + + ++ D++ LQE + + Sbjct: 1 MKIATWNVNSIRIR-----------------QQQVSHWLQMNPVDVLCLQETKVIDADFP 43 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + ++ S + N S + VR +VL L D R Sbjct: 44 KMPFEELGYHLYISGQPSYNGVALLSRQPLED---VRIGFTQVLGVDDVLAATFDQQKR- 99 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--- 197 ++ + ++++++ + L S + Y W+ Sbjct: 100 --------VISGIFHDVRIVNLYVPNGADLSSDKYAYKL-------------QWLKMLRN 138 Query: 198 -----KKESLVPFVIAGDFN----------------RKINYLGNNDDFWK--TIDPNDSL 234 K+ + GDFN + + I D+ Sbjct: 139 YLTLFKENYPQELCVCGDFNVAPEDKDIHNPKGKETHIMATPQERKALQEVLEIGLKDAF 198 Query: 235 IRFPKEKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDI-KSR 288 +F E + RN+ ID+ FL + + + DI + Sbjct: 199 RKFTAEGGHYSWWDYRSGGFQRNRGWRIDH--------HFLTPKLYEQATSCTIDIEPRK 250 Query: 289 GKRLSDHCPISIDY 302 ++ SDH P+ +++ Sbjct: 251 QEKPSDHTPVIVEF 264 >gi|73748062|ref|YP_307301.1| endonuclease [Dehalococcoides sp. CBDB1] gi|73659778|emb|CAI82385.1| probable endonuclease [Dehalococcoides sp. CBDB1] Length = 639 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ + D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHN-----------GFNTQGKLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLG 132 W I + R+ ++++A + YP+L Sbjct: 452 -----------SRGWVI---SGRVDMLEWLSQRLNMYSAFGATAGEYWGNAILSKYPILD 497 Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + ++++ G+ +++ HL E L Q Sbjct: 498 THNVSLESEELPIKRGYLNAVLDLGGRYLYLAATHL----HHVPEEGDVR-----LIQAG 548 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + W ++ +I GDFN Sbjct: 549 ELADFW-----DNAPATIILGDFN 567 >gi|194336282|ref|YP_002018076.1| Endonuclease/exonuclease/phosphatase [Pelodictyon phaeoclathratiforme BU-1] gi|194308759|gb|ACF43459.1| Endonuclease/exonuclease/phosphatase [Pelodictyon phaeoclathratiforme BU-1] Length = 342 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 95/356 (26%), Gaps = 81/356 (22%) Query: 2 IRKYVLALVFFLVPCT---------ASVAQKVRLVSWNINTL-------SEQEGVSLWKN 45 +RK + + F + + V + WN+ L + + Sbjct: 1 MRKILCYVFLFFCAVSWISQPAAGNPKAGKSVLFLWWNVENLFDTRNDPITNDDDFTPEG 60 Query: 46 SVKRTTSDY--------TLLRQYAKNLD----ADIVFLQEMGSYNAVAKV---FPKNTWC 90 + T LL + D D++ E+ + K P + Sbjct: 61 KLHWTEKKLILKQMRIRHLLSAVKAHPDYNAYPDLLAFAEVENREVFEKTLSGIPDIGYK 120 Query: 91 IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV 150 Y ++S DI A Q+ +K + R +++V Sbjct: 121 TIY------HNSSDPRGIDIGLAF---------NPQTVQAKASKAYSVASAERATRKIIV 165 Query: 151 E---INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 G ++ H S F + + +++ L + K ++ +I Sbjct: 166 AEFLSEGHPFHLILNHWPSRSFDTHWTEPKRVAAASVAR--HILDSLLLSKPKA--DVII 221 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD--SRCNAN-------KNLRNKIPID 258 GDFN + + T D + K C + ID Sbjct: 222 MGDFNDEPGNRSLREGLGSTFD---AARLKTNGKKFLYNCWSGYEGIGSYSYKNRWQQID 278 Query: 259 YFVMDQNAYKFLI----QESFS------------EILYNEDDIKSRGKRLSDHCPI 298 ++ + L Q +F Y + + SDH P+ Sbjct: 279 QILLSAGMFDELGLYAPQNAFRCFSFFRLLDATGNKPYATFEKRKYTGGYSDHLPL 334 >gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-003] Length = 256 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 47/159 (29%), Gaps = 27/159 (16%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + +GK+ ++ + HL + S L + Q K I P +I G Sbjct: 120 ADSDGKQFYIFNTHL----------DHISEEARLFASQLLLKKAAI---IAENSPVIILG 166 Query: 210 DFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 DFN + N N + + + IDY + Sbjct: 167 DFNTQPNTPTYNYITEKYQDAQLISQKPAKGPT-GSFHDFHPLRPENELEKIDYIFVS-- 223 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F Y + G SDH P++ + D+ Sbjct: 224 -------NEFQVSTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|239834620|ref|ZP_04682948.1| outer membrane autotransporter barrel domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822683|gb|EEQ94252.1| outer membrane autotransporter barrel domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 1199 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 74/228 (32%), Gaps = 55/228 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+++ NI ++ L T+D+ + D++ +QE+ V Sbjct: 38 SYDIRVMTLNI-WNKFKQNPEL--------TADFMAAANF------DVLGMQEVNGSTYV 82 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + + R + ++ +V ++ + G + Sbjct: 83 TRI------------PDFLQTAGRGTYGNVQVG------DVGIISRLPGKFGTINLGGNT 124 Query: 141 GNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R ++ G + L +HL + D + + + L W Sbjct: 125 QGRYVSYTQLDAQGSRPQTLVGTVHLD---YADGSTGRVNEA--------KALNTWAK-- 171 Query: 199 KESLVPFVIAGDFN------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ P ++ GDFN R ++++ + D N ++ Sbjct: 172 -GAIQPIMVMGDFNAGDVSERGLHHIDAQIRLMQQSDGNTFYRDLTRQ 218 >gi|297154598|gb|ADI04310.1| hypothetical protein SBI_01189 [Streptomyces bingchenggensis BCW-1] Length = 293 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 54/291 (18%) Query: 7 LALVFFLVPCTASVAQKV-----------RLVSWNINTLSEQEGVSLWKNSVKRTTSDYT 55 + LV P A +A+ + R+++WNI +++V R Sbjct: 33 MVLVGPSAPSGAPLARSLPVDAVRGVVPNRVMTWNICN-------PCEESNVDRA----A 81 Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + YA ++ LQE + + +++ ++ + + Sbjct: 82 EIATYA----PQVIGLQEACVRDVERMRDYLEGFYGLVYHVEYGMVLRNWGRCGGAPWSP 137 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A + + + P + + + +R + + + G+ + V + HL Sbjct: 138 GAFGQAVLSAAPMTNP-VNVEYPDGGSEDRGYMAVTTSVGGRFVRVFNTHL--------- 187 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + Q L + + + ++ GDFN + W + + Sbjct: 188 AERRQEAVR--ADQTDVLAADVARHDRA----IVLGDFN-AVPDAPELTGMWA-LAADTD 239 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 P C + + DY + ++ + D Sbjct: 240 PQCHPSST-GTCKPTTDWQ--SKFDYIFLRG-----IVPLEHRVLPTPYSD 282 >gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 253 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 93/308 (30%), Gaps = 84/308 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VSWN+N + + + D+ + +DADI +QE + Sbjct: 3 MKMVSWNVNGIRA---------CMTKGFMDF------FQEIDADIFCIQETKMQPGQLDI 47 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + S ++ ++ V K + + D R Sbjct: 48 ATPGYYQYINSADKKG-----------YSGTMVFTKEKPIAVTYDLGIDEHDHEGR---- 92 Query: 144 RAVELLVEINGKKIWVLDIHL---KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + +++ ++ K + +L + Sbjct: 93 -----VITCEYENFYLVCVYTPNSKDGLLRLDYRMQWEDDFR------AYLNA-----LK 136 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSL----IRFPKEK 241 ++ GD N R + T+ + + +P+++ Sbjct: 137 EKKSVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAKMTTLQQSGFIDSFRYLYPEQE 196 Query: 242 DSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + IDYF++ ++A + + S ++ SDHC Sbjct: 197 GIYSWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASIHTDVFG-----------SDHC 245 Query: 297 PISIDYDF 304 P+S+D DF Sbjct: 246 PVSLDIDF 253 >gi|227505913|ref|ZP_03935962.1| exonuclease III [Corynebacterium striatum ATCC 6940] gi|227197435|gb|EEI77483.1| exonuclease III [Corynebacterium striatum ATCC 6940] Length = 269 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 99/307 (32%), Gaps = 71/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN + R LL ++ D D++ LQE + Sbjct: 1 MRIATWNIN------------SVRTRVQRAVDLLAKH----DIDVLCLQETKVADDKFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYP-LLGAKDSFSR 139 F + + + +A V K + S+P G + Sbjct: 45 MDFEAAGYHV------------THHGLNQWNGVAIVSKSEPEEVFTSFPGQPGFAKDPEK 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 N A + I G +IW L + + E T L L + + Sbjct: 93 PQNLEARAVGARIRGVEIWSLYV-------PNGREITDRHYAYKLQF-LYALARYAESRA 144 Query: 200 ESLVPFVIAGDFN--------------RKINYLG-NNDDFWKTIDPNDS---LIRFPKEK 241 +S + ++ GDFN R ++ ++ ++ RF +E+ Sbjct: 145 QSKL--LLTGDFNIAPRDEDVWDIEAFRGKTHVTEPERAAFQMLEEAGLEEVTRRFTEEQ 202 Query: 242 DSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K+LR + ID+ + ++ + D ++ G + SDHC Sbjct: 203 RWTYFDYKSLRFQKNEGMRIDFQLASRSLAATVQSAQV-------DMVERAGDKTSDHCL 255 Query: 298 ISIDYDF 304 + DYD Sbjct: 256 LLADYDL 262 >gi|325286474|ref|YP_004262264.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324321928|gb|ADY29393.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 311 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 92/329 (27%), Gaps = 69/329 (20%) Query: 24 VRLVSWNINTL--SEQEGVSLWKNSVKRTTS----------------DYTLLRQYAKNLD 65 V + +N+ L + + +L + + + + + Sbjct: 2 VTIAFYNLENLFDTIDDPTTLDDDFTPKGEKRWTNNRYKKKVFKLTKTISEIGTHNTKEP 61 Query: 66 ADIVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ + E+ + N V + + + H I T + K Sbjct: 62 PVLIGIAEVENENVVKDLVTNSNLERINYDYV--------HYDSPDERGIDTGLIYNKDY 113 Query: 121 VRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 VL + + + R + + ++NG+++ V H + E + Sbjct: 114 FTVLHSEPIHVHIINTNGDVDNTRDILYVHGKLNGEEVHVFVNH-----WPSKREGKITT 168 Query: 180 SCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPND----SL 234 + + ++++ P +++ GDFN +D +D N S Sbjct: 169 DYKRIEAAKVLINFMAKIEEKNPNPNYIVMGDFN----DSPKSDSIQTLMDTNKFYNPSE 224 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESFSE---------- 277 EK S R D ++ + FL F E Sbjct: 225 HLLTFEKGSA----SYKRKWSLFDQIIISHSFLNYEKGTHSFLEANIFDEHFLTEFDGKF 280 Query: 278 --ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ I + Sbjct: 281 KGTPFRTYVGRKYVGGYSDHFPVFIQLKY 309 >gi|302865833|ref|YP_003834470.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302568692|gb|ADL44894.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 675 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 53/160 (33%), Gaps = 34/160 (21%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ + +++ G+++ V+ HL+ D +E + + + P Sbjct: 549 ALGVTLDLGGRELAVVATHLQPPPGRDPVEQAGEVA-------------AFAGRYANGRP 595 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 V+ GD N +D + + + + R + + R + ID+ + Sbjct: 596 LVLGGDLN-----TEPDDPAFAEFTRSGLVDALAAARPLRTSPADDPRTQ--IDHVFVSP 648 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++++ SDH P+++ Sbjct: 649 G--------------LTATEVRAPRTEASDHLPVTLTVTL 674 >gi|327306001|ref|XP_003237692.1| DNA lyase [Trichophyton rubrum CBS 118892] gi|326460690|gb|EGD86143.1| DNA lyase [Trichophyton rubrum CBS 118892] Length = 603 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 87/342 (25%), Gaps = 93/342 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +RL +WN+N + W R + + L+ADIV QE + + Sbjct: 3 LRLTTWNVNGIRNPFSYEPW-----RGNRTFGTM---FDILEADIVVFQE----AKIQRK 50 Query: 83 -----VFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + W ++S + +S A+R + P Sbjct: 51 DLQDDMVLVSGWDCYFSLPRQKKGYSGVVIYTRSSKCSAIRAEEGVTGALCPPSSKTPFR 110 Query: 137 FSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLE------------NTYSPSCS 182 A + +E ++ + + + C + + Sbjct: 111 QLSASEQIGGYPSIEQMEELSEVDPIIVDSEGRCLILEFPAFVLIGVYCPADRDETRDDF 170 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------------------RKINYLG 219 L L+ + + ++AGD N ++Y Sbjct: 171 RLGF-FNLLEVRVRNLVKMGKRVILAGDLNTCAGPIDSAPALERIRKGTETEEEYLSYPA 229 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSR-------------------CNANKNL----RNKIP 256 + + + ++ C K Sbjct: 230 RL--IFNRLVRPVGSTADTHDTETPPVLRDLCREFHPGRTGMYTCWNQKVNARPGNYGSR 287 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDY + N + ++ + E G SDHCP+ Sbjct: 288 IDYILCSDNIRSWFVESNIQE-----------GLMGSDHCPV 318 >gi|300087680|ref|YP_003758202.1| endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527413|gb|ADJ25881.1| Endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 654 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 82/284 (28%), Gaps = 69/284 (24%) Query: 3 RKYVLALVFFLVPCTASVA-----------QKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 R V L L+P +A +R+ ++N+ G + Sbjct: 394 RALVTGLAVLLLPTGTLLAFPTPSATADNGMPLRVATYNL-----HNGFNAVG------K 442 Query: 52 SDYTLLRQYAKNLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLINH 101 D L Q ++ AD+V LQE + +++ + S N Sbjct: 443 LDLEALAQNIEDSGADVVALQEISRGWLVNGRVDMLEWLSRRLDMPYYFGPSSGPFWGN- 501 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 A+ R + P G R + +++++G V+ Sbjct: 502 -----------ALLSRYPITSAVNVPLPSEGLP------LERSFIAAILQVDGLNFQVIA 544 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HL ++ + Q L D+ + + VI GDFN N Sbjct: 545 VHL----HHVEGDSDIRVA------QVSALLDFYNRSSRT----VIMGDFN-----AEPN 585 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 D K + + ++ IDY + + Sbjct: 586 DQEIKLMRAAGLRDIMLSLEPPPAYTFRSDDLFQRIDYIWVSPD 629 >gi|292490695|ref|YP_003526134.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291579290|gb|ADE13747.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 286 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 83/306 (27%), Gaps = 62/306 (20%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNIN----------TLSEQEGVSLWKNSVKRTTSDYTLL 57 L +++ +RL+S+NI L+ L +T + + Sbjct: 3 TLALHSPLVSSTKRHPLRLLSYNIQAGVTTSRYHHYLTRSWKHILPDVHRHKTMASIAGV 62 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D DIV LQE ++ F E IA + Sbjct: 63 -----ISDFDIVGLQE-ADVGSLRTGFVN---QAELLAELCHFPHWHQQATRRFANIAQQ 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + Q + R A+ + VL IHL Sbjct: 114 SNALLSRIQPNYVRS-YRLPGLVPGRGAILAHFGNPENPLIVLIIHLALG--------RR 164 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 S + QQ + + + P+V+ GD N + + L Sbjct: 165 SRT-----QQLSLISHLVHE-----HPYVVVMGDLN-----CQPHSPELSALLQKTGLKA 209 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + R K ID+ ++ S + + +SDH Sbjct: 210 PATKIAT----YPSWRPKRHIDHILVSP---------SLEVT-----QVCALEHTVSDHL 251 Query: 297 PISIDY 302 P++ + Sbjct: 252 PLATEI 257 >gi|253581466|ref|ZP_04858691.1| dnase I homologous protein dhp2 precursor [Fusobacterium varium ATCC 27725] gi|251836536|gb|EES65071.1| dnase I homologous protein dhp2 precursor [Fusobacterium varium ATCC 27725] Length = 274 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 104/305 (34%), Gaps = 46/305 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K ++FL+ AQ+ + S+N L ++ DYTL Q Sbjct: 1 MKKIKFIYIYFLL-TVIIFAQEGYIASFNTLRLG-------------KSQKDYTLTAQAL 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + DIV L E+ K+ W S + +S ++ + A Sbjct: 47 EMF--DIVGLVEVMDIEGAEKLVNALEKVSGEKWDYHISPFPVGKNSYKE-----YFAYV 99 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K V+ L++ +D F+R + + + +H F + Sbjct: 100 WKKDKVKFLKERGFYKDVEDKFARPP--YGADFKIGKFDFTFVL--VH---SVFGKNESA 152 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + + + D+ +IAGDFN G ++ F K + +D +I Sbjct: 153 RRAEA-----FKMNEVYDYFQNMDLQENDIIIAGDFN----LSGFDESFEKLLSHSDKII 203 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K+L N D + K +S + + + K ++SDH Sbjct: 204 YALSPVIKTTLGKKSLANSY--DNMFLSTIYTKEFTGKSG-ALDFTQGQYKLMKDKISDH 260 Query: 296 CPISI 300 PI I Sbjct: 261 LPIFI 265 >gi|84516871|ref|ZP_01004229.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] gi|84509339|gb|EAQ05798.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] Length = 257 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 92/308 (29%), Gaps = 83/308 (26%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + A + ++P ++ +RL S+NI K R D + Sbjct: 10 RAGRAYIMGMLP-VTHKSRPLRLASYNI---------RKAKGVDGR--YDPGRIVDILAG 57 Query: 64 LDADIVFLQEMG----------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 LDAD++ LQE S + + + + + T + + + A Sbjct: 58 LDADVIALQEADFRWRGRPGALSPDMIRQ---HTDYDLVPVTTQGDSLGWHGN------A 108 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + VR+ ++ + L G + R A+ + ++ G V+ HL L Sbjct: 109 VLVRRGSLVTDVKRLILPGLE-------PRGALRIDMDAGG-PFSVIATHL-------GL 153 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + +Q + + P + GDFN W D Sbjct: 154 TRFHR------QRQLAAISAAV---APDGRPTAVLGDFNE-----------WSATRGLDP 193 Query: 234 LIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 L K+ +P +D + + L + + Sbjct: 194 LRADFTVHA----PGKSFHAAMPMAALDRIALGRGLT--LTDGGVVQT--------RQSL 239 Query: 291 RLSDHCPI 298 R SDH PI Sbjct: 240 RASDHLPI 247 >gi|330814067|ref|YP_004358306.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] gi|327487162|gb|AEA81567.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] Length = 247 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 90/268 (33%), Gaps = 55/268 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ Y K + D++ LQE+ + + K FP + + I + + + Sbjct: 6 NQVKDYLKKKEIDVLVLQEIKTED---KNFPHEDF-------KKIGYHSYSFGQKSYNGV 55 Query: 115 AV-RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 A+ K+ ++V + + A V N KK ++ I+L + +++ Sbjct: 56 AIISKEELKVTTSEFKDPLGQSRCIAA--------EVSHNDKKFLLVSIYLPNGNPINTE 107 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-------NNDDFWK 226 + Y + + +I K + +I GDFN + ND +K Sbjct: 108 KYDYK------KKWMDVFEKYIVGKFKKNKNIIITGDFNVIPSEEDVGNPEDWTNDALFK 161 Query: 227 -----------TIDPNDSLIRFPKEKDSRC----NANKNLRNKIP-IDYFVMDQNAYKFL 270 + D F KE RNK ID++++ + + L Sbjct: 162 LEIRKKFRSLLNLGFKDGFRLFNKEPKEYTFWDYQQGSWQRNKGLRIDHYLVSDSMIQDL 221 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPI 298 D +R SDH PI Sbjct: 222 K-------TIEIDKFTRDNERPSDHVPI 242 >gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] Length = 250 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 91/318 (28%), Gaps = 105/318 (33%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L ++ + +DAD LQE A Sbjct: 1 MKFISWNVNGLRACVTKGFKES---------------FEAIDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + +++ +S TAI + + + V Sbjct: 45 IAFDGYESYWNYAEKKGYSG--------TAIFTKHQPLNVT------------------- 77 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLK---DWIT-- 196 + + + ++ L +EN Y +C + Q + L+ W Sbjct: 78 YGLGIEEHDHEGRVITL-----------EMENFYLVTCYTPNSQDGLKRLEYRMRWEDDF 126 Query: 197 ----QKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSL--- 234 ++ + P ++ GD N + + + Sbjct: 127 QTYIKRLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKMTQFLGKGFIDSF 186 Query: 235 -IRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 +P++ + R K IDYF++ L+ +Y Sbjct: 187 RTLYPEQVTYSWW---SYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIHTEVYG----- 238 Query: 287 SRGKRLSDHCPISIDYDF 304 SDHCP+ ++ +F Sbjct: 239 ------SDHCPVEVELNF 250 >gi|255011538|ref|ZP_05283664.1| hypothetical protein Bfra3_20505 [Bacteroides fragilis 3_1_12] gi|313149364|ref|ZP_07811557.1| metallophosphoesterase [Bacteroides fragilis 3_1_12] gi|313138131|gb|EFR55491.1| metallophosphoesterase [Bacteroides fragilis 3_1_12] Length = 608 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 96/305 (31%), Gaps = 61/305 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K VL L L +A +RL+++N+ + + Y + Sbjct: 1 MKKLVLLLFSALFVLSAQAGDVLRLMTYNVRN-----ARGMDNSCN------YQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKN 120 N D+V +QE+ S A + + +L + + + I + K Sbjct: 50 NNARPDVVAVQELDSMTA--RSNGTDVLRELAERTQLHPYFAPAIDYDGGKYGIGLLAKE 107 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL-ENTYSP 179 + Q++ L G +++ + + C SL E Sbjct: 108 APLRLQTFALPGREEARTLIVAEFPEYIF-----------------GCTHLSLTEEDRMK 150 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S +L A + PF +AGDFN F K + ++ PK Sbjct: 151 SLEILKSVAVSAEK----------PFFLAGDFN-----SDAGSGFIKELKNTFQVLSNPK 195 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + K +DY + + + S I D+ + SDH P+ Sbjct: 196 Q---PTYPASEP--KETLDYLIALKQEKPTFVVSSARVI----DEPLA-----SDHRPLL 241 Query: 300 IDYDF 304 ++ Sbjct: 242 VEVRM 246 >gi|163801448|ref|ZP_02195347.1| hypothetical protein 1103602000598_AND4_11284 [Vibrio sp. AND4] gi|159174937|gb|EDP59737.1| hypothetical protein AND4_11284 [Vibrio sp. AND4] Length = 447 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 42/294 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NI + +++ + S L Y D++ LQE+ S + Sbjct: 182 LQVATYNI-WMIPSVSSNIFTRASMMEHS----LSGY------DVLALQEVFSRH----- 225 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ I+ V +L+ + ++ Sbjct: 226 -REPMFDALSAEYPYRTEVVGGDSHAIYDGGVVTLSRYPILESDALVFDHCAGTDCYADK 284 Query: 144 RAVELLVEINGKKIWVLDIHLKSF----CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 V ++ NG+ + + HL SF +L++Q Sbjct: 285 GIVYTKIDKNGEIYHIFNTHLASFDTREAKRLRRLQLGLLRTFMLTKQIP---------- 334 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------- 252 + AGDFN N + D + ++ N Sbjct: 335 -DDEAVIYAGDFNIDKNSDFSEYLLMLATLEVDP-PAYMGYTEATFEPKINPYALAKYSG 392 Query: 253 --NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +DY + + + ++ + + LSDH + ++ F Sbjct: 393 GEKSEFLDYVFVSLEHRRASKNTNTVKLKQRINKDQWGQWHLSDHFSVVGNFTF 446 >gi|29828508|ref|NP_823142.1| exonuclease [Streptomyces avermitilis MA-4680] gi|29605612|dbj|BAC69677.1| putative exonuclease [Streptomyces avermitilis MA-4680] Length = 262 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 86/300 (28%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE A+ Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCIQET---KTTAEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + + +AV + L G R Sbjct: 42 FPAD-------ALRELGYESAVHATGRWNGVAVISRVGLEDVVRG-LPGDPGFDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + ++ Y Q + LK + Sbjct: 94 A-----LSATCGPVRVWSVYVPNGREVEHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 PF + GDFN +DD ++ + R + + + + Sbjct: 143 PFAVMGDFN----VAPTDDDVYDVAAFEGLTHVTPAERAALATLREAGLSDVVPRPLKYE 198 Query: 259 Y--------FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + I + + + + R SDH P+ +D D Sbjct: 199 HPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVKDAYVDREERKGKGASDHAPVVVDLD 258 >gi|317401341|gb|EFV81978.1| endonuclease [Achromobacter xylosoxidans C54] Length = 262 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 71/279 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAI 114 L+ + + AD++ LQE+ KV ++ + ++ + ++ + Sbjct: 20 LQPWMEKHAADVLCLQEI-------KVSDED---LTEDLRHPPGYTGHFHHAVKKGYSGV 69 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + ++ LG ++ ++ + K + V+ +L S D + Sbjct: 70 GIYLRDAAERVS--IGLGCEEFDPEGR-------IIRADWKNLSVISAYLPSGSSGDERQ 120 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 L + W+ + + + K++ FVI GD+N + + Sbjct: 121 QAKY---RFLDRFGPWIDELMHEHKKTGREFVICGDWNIAHKEIDLKNWKGNLKNSGFLP 177 Query: 224 -----------------FWKTID--PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++TID P+ + + N IDY + Sbjct: 178 EERAWLTDVFDKRGFVDVFRTIDERPDQYTWWSNRGQAWAKNVG------WRIDYQIATP 231 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + S +Y ++ R SDH P++IDYD Sbjct: 232 G----IAARARSVAIYKDE-------RFSDHAPLTIDYD 259 >gi|289432089|ref|YP_003461962.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] gi|288945809|gb|ADC73506.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] Length = 639 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ + D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHN-----------GFNTQGKLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLG 132 W I + R+ ++++A + YP+L Sbjct: 452 -----------SRGWVI---SGRVDMLEWLSQRLNMYSAFGATAGEYWGNAILSKYPILD 497 Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + ++++ G+ +++ HL E L Q Sbjct: 498 THNISLESEGLPIKRGYLNAVLDLGGRYLYLAATHL----HHVPEEGDVR-----LIQAG 548 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + W ++ +I GDFN Sbjct: 549 ELADFW-----DNAPATIILGDFN 567 >gi|283779137|ref|YP_003369892.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437590|gb|ADB16032.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 307 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 111/330 (33%), Gaps = 70/330 (21%) Query: 4 KYVLALVFFLVPCTASVA------QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 LA L+ + A Q +R++S+NI + ++G W V R + Sbjct: 12 SISLAFAAVLLTNSGEAAEPTSEPQPLRVMSYNIRYGTARDGDDAW---VHRQEP----M 64 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTA-- 113 +Y K DI+ LQE A+A + I S ++ Sbjct: 65 VKYLKESKVDILGLQE-----ALA-------FQISDLLEGLPEFKRSGVARDDGKDKGEF 112 Query: 114 --IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV--------ELLVEINGKKIWVLDIH 163 + R + ++++ L A + A+ EL + GK+ H Sbjct: 113 SPLLYRHERFELVREGTFWLSATHEVVGSKGWDAMLPRVCSWTELKDKSTGKRFIAASTH 172 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 F + + S L++++ + L + +P V+ GDFN ++ + Sbjct: 173 -----FDHMGQEARAESGKLIARRLKEL--------AADLPVVLVGDFNARLASDPIQNV 219 Query: 224 F--------WKTIDPNDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQES 274 W+ +D + P + N K ID+ + F++ + Sbjct: 220 LAKPDSASDWRLVDAQGVSAKKPTGPTATFNGFKAIPEGDNKIDFIFV----RDFVVLDH 275 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E G+ +SDH P+ + +F Sbjct: 276 VVENPLTP-----AGRFVSDHLPVIANIEF 300 >gi|147668908|ref|YP_001213726.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] gi|146269856|gb|ABQ16848.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] Length = 639 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P +R++++N++ + D L + ++ AD+V LQE+ Sbjct: 403 PSPPQFEGSLRIMTYNLHN-----------GFNTQGKLDMEALARVIEDSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLG 132 W I + R+ ++++A + YP+L Sbjct: 452 -----------SRGWVI---SGRVDMLEWLSQRLNMYSAFGATAGEYWGNAILSKYPILD 497 Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + ++++ G+ +++ HL E L Q Sbjct: 498 THNISLESEGLPIKRGYLNAVLDLGGRYLYLAATHL----HHVPEEGDVR-----LIQAG 548 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + W ++ +I GDFN Sbjct: 549 ELADFW-----DNAPATIILGDFN 567 >gi|328543967|ref|YP_004304076.1| exodeoxyribonuclease III [polymorphum gilvum SL003B-26A1] gi|326413711|gb|ADZ70774.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] Length = 260 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 84/317 (26%), Gaps = 97/317 (30%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R + + + D+ LQE+ S + Sbjct: 1 MKIATWNIN------------GVKAR----IDTVLAWLQEARPDVACLQEIKSVDEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR---- 139 FP + + ++ +A+ K + D +R Sbjct: 42 FPCQPFE-------DLGYNVATHGQKGFNGVALLSKRPLEDVRRGLPGDDGDEQARYIEA 94 Query: 140 --AGNRRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + +R AV + L NG + D W+ Sbjct: 95 CVSTDRGAVRVGCLYLPNGNPL-----------GTDKFPYKL---------------AWM 128 Query: 196 TQ-------KKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIR--------F 237 + + PF++ GD+N + D + +S F Sbjct: 129 DRLRRHAALRLAEEQPFLLLGDYNVIPEPKDARNPQDWLGDALFQPESRQHFRALVNLGF 188 Query: 238 PKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + +A ID+ ++ A L D Sbjct: 189 TEAVRACTDAADTYTFWDYQAGAWQKNNGIRIDHVLLSPQAGDLLASCGI-------DKH 241 Query: 286 KSRGKRLSDHCPISIDY 302 ++ SDH P+ ++ Sbjct: 242 VRAWEKPSDHVPVWVEL 258 >gi|328541790|ref|YP_004301899.1| endonuclease/exonuclease/phosphatase family [polymorphum gilvum SL003B-26A1] gi|326411542|gb|ADZ68605.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 100/322 (31%), Gaps = 74/322 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 +RL ++N+ S E + R LR L AD++ LQE+ + Sbjct: 1 MRLATFNLE--SFGEDDFDAEALQPR----LDALRPTLLALKADVLCLQEVNAQRLERKG 54 Query: 78 ----NAVAKVFPKNTWCIFY---STERLINHSKRDSNNDIHTAI------AVRKKNVR-- 122 A+ + + F+ S N + + +R+ +V Sbjct: 55 TRVFAALDALVAGTPYEDFFRATSLRPDGTAPADKHNLAVLSRFPVVSSRTIREDHVEPP 114 Query: 123 --VLQQSYPLLGAKDSFS--RAGNRRAVELLVEINGKKIWVLDIHLKS------------ 166 + + PL + R A+++ + + + V +HL++ Sbjct: 115 LWRPRSADPLPAGPEPVGFDRPLLHAALDVGL---PRPLHVFCVHLRAPIAAPVAGGKLS 171 Query: 167 ----FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI--AGDFNR------- 213 E + S + QA L+ I ++ +I AGDFN Sbjct: 172 AVSWGSTAAWAEGYFLASMKRVG-QALELRLAIDALFDADPEALIAAAGDFNAVGLESPL 230 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQ 272 ++ +D + L + R + +D+ ++ Sbjct: 231 RLVMADPDDTGNPALGH-RRLRQLDAAVPEERRQTVVHRGRGHALDHILVS--------- 280 Query: 273 ESFSEILYNEDDIKSRGKRLSD 294 E+L+ DI+ + L+D Sbjct: 281 ---RELLFRARDIRVLNEGLAD 299 >gi|294506961|ref|YP_003571019.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294343289|emb|CBH24067.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 361 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 89/311 (28%), Gaps = 41/311 (13%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-DYT----LLRQYAKNLDADIVFLQ 72 A VR+ +WN+ + + T + D + + + LDAD++ LQ Sbjct: 61 FPDADTVRVATWNLEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLVLQ 120 Query: 73 EMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E S + + S E + + + VR V Sbjct: 121 EAESEAFLQSFVEDRLGDTGYRFATSVESPTWYMNVVLLSRYPLGV-VRNYADVVTPIVG 179 Query: 129 PLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL-DIHLKSFCFLDSLENTYSPSCSLLSQ 186 + +++ + V + ++W L HLK+ + L Sbjct: 180 QEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAG-RSAADRGWRIGQIRFLHA 238 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC- 245 + L+ + + + ++AGD N + + + N + R Sbjct: 239 ELSRLR---DDRPAAKM--LVAGDLN-----SLPDSPELRLLLNNPDRPAPDSVQPGRVP 288 Query: 246 -----------NANKNLRNKIPI---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P+ DY + + L+ S D + Sbjct: 289 GDIRFTDPLSDRPTPTHPADNPVRQLDYLLPNPALSDRLVDGSVRVARPLPADSMAAT-- 346 Query: 292 LSDHCPISIDY 302 SDH P++ + Sbjct: 347 -SDHLPVAASF 356 >gi|37993816|gb|AAR06986.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 75/209 (35%), Gaps = 21/209 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERPDLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWITQKKESLVPFVIA-GDFNRK 214 Q + ++D+I K +V+ GD N Sbjct: 198 QLKEIQDFIKNKNIPNDEYVLFGGDMNVN 226 >gi|300118993|ref|ZP_07056704.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] gi|298723609|gb|EFI64340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] Length = 263 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 75/258 (29%), Gaps = 39/258 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATITYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ K+ + + ++ + ID + I+ S Sbjct: 186 EYMMQKGLYDTYELAIKKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKVV 242 Query: 278 ILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 243 FNGTNRKV------ISDH 254 >gi|299067973|emb|CBJ39187.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CMR15] Length = 248 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 24/156 (15%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F + + Y + H+ + + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F + Sbjct: 93 LSRYPILLSEN---LDISDH--RFEQRGLLHAVADLGFGEVHLLCAH-----FGLFARSR 142 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 QA+ L + + + P V+AGDFN Sbjct: 143 RR--------QAEALIERVCSVVPTDAPLVVAGDFN 170 >gi|226503161|ref|NP_001147113.1| type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Zea mays] gi|195607324|gb|ACG25492.1| type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Zea mays] gi|223947803|gb|ACN27985.1| unknown [Zea mays] Length = 455 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 88/340 (25%), Gaps = 83/340 (24%) Query: 27 VSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +WN+ ++ +G+ L SD+ D ++ QE+ A V Sbjct: 84 STWNVGGVAPPDGLDL---------SDWLDGGDDDGPYDMYVLGFQEVVPLRA-RNVLGA 133 Query: 87 NTWCIFYS----TERLINHSK-----------------------------RDSNNDIHTA 113 + + T +N S R + Sbjct: 134 DKKRVGMRWIELTRAALNRSHSQRSRGGGGGKQKVHPVRDGGGGELGREYRCVVSKQMVG 193 Query: 114 IA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 I VR R +++ GN+ V + ++ + HL S Sbjct: 194 ILLTVWVRSDLRRFVRRPSVSCVGCGVMGCLGNKGGVSVRFWLHDTSFCFVCCHLASGGR 253 Query: 170 LDSLENTYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF- 224 + + + +LS+ + L + Q ++ GD N +I+ Sbjct: 254 EGDEAHRNANATEILSRTTFPRGHALNLPLPQNILDHDRVILLGDLNYRISLPEAKTRLL 313 Query: 225 -----WKTIDPNDSLIRFPKEKDS---------RCNAN-KNLRNKIPIDYFVMDQNAYKF 269 WKT+ ND L + + K N Sbjct: 314 VERQDWKTLLENDQLRAEVCRGGAFQGWSEGPIGFSPTYKYHPNSDAYYGCATAARGRNK 373 Query: 270 LIQE-----------SFSEILYNEDDIKSRGKRLSDHCPI 298 ++ Y+ RLSDH P+ Sbjct: 374 RRAPAWCDRVLWRGAGLAQTRYD-----RCESRLSDHRPV 408 >gi|119773257|ref|YP_925997.1| phospholipase C [Shewanella amazonensis SB2B] gi|119765757|gb|ABL98327.1| Phospholipase C [Shewanella amazonensis SB2B] Length = 334 Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 121/348 (34%), Gaps = 59/348 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M + + L + + A+ ++++++NI L+ Q+ + + R + T L + Sbjct: 1 MRKHHALLITLIFALQPQAYAESLKVMAYNIMQLNVQDWDQANRAA--RLPAALTQLSE- 57 Query: 61 AKNLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINH-------SKRDSNNDI 110 D++ + E + A++ + + E S +S + Sbjct: 58 ----QPDVILVSEAFNDEAETALSSLASLYPYQTANVGENCSGADWDALTGSCSNSPMVV 113 Query: 111 HTAIAVRKKNVRVLQQSY----PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + K ++++++ L G+ D ++ G + +E NG++ ++ HL++ Sbjct: 114 RGGVVILSKYPILVRKAHVFNHSLQGSWDDYANKGF---AYVAIEKNGERFHLIGTHLQA 170 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW 225 D+ + Q ++ +I ++ + +I GD N + + D Sbjct: 171 THDDDTAQEHQVR-----LGQLGEIQAFIEAEQIPANEAVIIGGDMNVEWSKQQEVTDML 225 Query: 226 KTIDP----NDSLIRFPKEKDSRCNANKNLRNKIPIDY-----FVMDQNAYKFLIQESFS 276 T++ + + +D+ +DY +V +K Sbjct: 226 ATVNAGLNFSTPVTGSFSARDNWFTKANAYYFDYSLDYNDTLDYVFWHQDHKQPANNPEM 285 Query: 277 EILYNEDDIK--------------------SRGKRLSDHCPISIDYDF 304 + Y + I LSDH P+ ++++F Sbjct: 286 AVRYPKAQISWYWWYLKGYWNLSSGRYYHNGYYNELSDHYPVQVNFEF 333 >gi|57157231|dbj|BAD83645.1| deoxyribonuclease I [Anguilla japonica] Length = 282 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 7/111 (6%) Query: 195 ITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + + ++ GDFN NY+ +D + + S + Sbjct: 173 VDIRARWNTDNIILLGDFNAGCNYVAGSDWQQIRLYTDKSFHWLIPDSAD----TTVSHT 228 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V + ++ S S Y L SDH P+ + Sbjct: 229 NCPYDRIVATTTMMEAVVPHSASVYDYMTSLKLKLDMALAVSDHFPVEVQL 279 >gi|237717228|ref|ZP_04547709.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237718983|ref|ZP_04549464.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262405995|ref|ZP_06082545.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647971|ref|ZP_06725522.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806915|ref|ZP_06765740.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480085|ref|ZP_06998284.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|229443211|gb|EEO49002.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229451761|gb|EEO57552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262356870|gb|EEZ05960.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292636687|gb|EFF55154.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445944|gb|EFG14586.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298273894|gb|EFI15456.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 361 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE + + ++ + S + Sbjct: 125 SYLVDSNADIICLQEYNTA-------TNKKYLTEQDIKKALKAYPYQSVHQQGKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 +P+L + +++ ++ +N + +++ HL+S + Sbjct: 173 DVQLACFSKFPILSIHPIKYESNYNGSMKYVLNVNNDTLTLINNHLESNKLTKEDRGMYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINY 217 D +++ + L Q + L + + ++ GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPTTIVCGDFN-DGSI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKASDHYPI 354 >gi|307944213|ref|ZP_07659554.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] gi|307772559|gb|EFO31779.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] Length = 342 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 85/284 (29%), Gaps = 59/284 (20%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-----GSYNAV---AKVFPK 86 +E + L +++R + L Y +ADI+ QE A+ ++ Sbjct: 97 AETPDLKLISINLERLYLNDKTLTDYLVAQNADILLFQETFWWQQDRLLALDGLTEIAGL 156 Query: 87 NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 + L S I + + Y + A D + G R V Sbjct: 157 GPYPEHLVRGELGQTS-------IFSKFPI-------TNVEYIEVPASDVRNLTGYREIV 202 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKESLV- 203 + +E I + +H N+ +Q L D + +++++ Sbjct: 203 IVDIETPQGPIQLFAVH----------PNSPRSPTRWQERQNYLDLLTDAVRRRQQASDS 252 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PID 258 P +I GD+N F+ +D FP + R +D Sbjct: 253 PVIIMGDWN-----TSPWSWHFFTLLDETGLNTAFPNGIPQTTRFFYDYRLHWILGAIVD 307 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + + D+ +DH P+ ++ Sbjct: 308 HVAVSDD--------------FQFTDVSLGPDVGTDHLPLEVEL 337 >gi|302338290|ref|YP_003803496.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] gi|301635475|gb|ADK80902.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 44/259 (16%) Query: 56 LLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L + + DI QE+ + + + P + + + + +I+ Sbjct: 26 ALEDFLVRFNPDICCFQEIREETMRFLDEAMP-------FHARVEDDFNGWRNEGNIYY- 77 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 RK R + L + R ++L +G+K V +HL Sbjct: 78 ---RKDLFRETGHTELFLDMPEPDRRL---FILDLECLADGRKFQVCTVHL------THQ 125 Query: 174 ENTYSPSCSLLSQQAQWLK--DWITQKKESLVPFVIAGDFN------RKINYLGNNDDFW 225 N + + LK W+ +K P ++ GDFN R + G ND F+ Sbjct: 126 NNRDEQDTGTSYRHEEALKIARWLKNRKSDAPPLLLCGDFNDPWHPSRILAEAGLNDVFY 185 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + L + ++ + ID + L S + ++ Sbjct: 186 EL----GLLQPPTFPNPA---LSEEIYMNETIDRIMYGGGPLPVL----ASVVDFHGS-- 232 Query: 286 KSRGKRLSDHCPISIDYDF 304 +SDH P+ ++F Sbjct: 233 -GASCGVSDHKPVVAVFEF 250 >gi|282879047|ref|ZP_06287807.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281298781|gb|EFA91190.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 362 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 60/258 (23%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DADIV LQE + W + + + +S+ + H A K ++ + Sbjct: 131 DADIVCLQE------------SDAWGKYSDKAKALMYSQYPYHASSH---AKNKGDIMDI 175 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLEN-------- 175 +P++ +D + + + I+G + V++ HL+S + N Sbjct: 176 YSRHPIISQEDINYPSEGNHSTAFYLNIHGDTVIVINNHLESIGLSPEDKANFKGVVKGN 235 Query: 176 ----TYSPSCSLLSQ-----------QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 + S L + QA + +I ++ V ++ GDFN N Sbjct: 236 IKGDSAQISTKTLIKKLGEASSIRAAQADAIAQYIAAHRDKSV--ILCGDFNDGPNSYAR 293 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 K + + + + + + ID+ + ++ Y Sbjct: 294 R-TIAKQLRD-----CYVETANGPGISYHLGGFYVRIDHMMCSKDW-----------TPY 336 Query: 281 NEDDIKSRGKRLSDHCPI 298 N SDH PI Sbjct: 337 NCKVDNKIKA--SDHYPI 352 >gi|228963475|ref|ZP_04124632.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228796169|gb|EEM43620.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] Length = 263 Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQFDRL----MERVDSNKLAFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|209518265|ref|ZP_03267091.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] gi|209501285|gb|EEA01315.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] Length = 290 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 74/220 (33%), Gaps = 49/220 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-----GSY 77 ++LV WNI D + + A+ L D D++ LQE+ Sbjct: 1 MKLVDWNIQW-----------GCGVDGRVDLGRIVREARALCDFDVLCLQEVTRGFNEDP 49 Query: 78 NA--------------VAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 A +A + P+ S + S+ AI R + Sbjct: 50 AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGN--AIVTRLPVRQ 107 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-C 181 VL+ S P D + R A+E ++E + + V+ HL+ F + + Sbjct: 108 VLRHSLPWPA--DPAKPSMLRVALEAVLEADIGPLRVISTHLE---FYSEKQRLAQVARL 162 Query: 182 SLLSQQAQWLKDWITQKKESLVPF---------VIAGDFN 212 L Q+A + ++ PF ++ GDFN Sbjct: 163 RELHQEACNHARAPARGEKPDSPFADTARPISAILCGDFN 202 >gi|163854727|ref|YP_001629025.1| putative endonuclease [Bordetella petrii DSM 12804] gi|163258455|emb|CAP40754.1| putative endonuclease [Bordetella petrii] Length = 262 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 87/274 (31%), Gaps = 61/274 (22%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L+ + + AD++ LQE I S L + + H A+ Sbjct: 20 LQPWMQTHSADVLCLQE-----------------IKISDADLTDDLRHPPGYTGHFCHAI 62 Query: 117 RKKNVRV-LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K V + + + + + + K + V+ +L S D + Sbjct: 63 KKGYSGVGMYLRNTAERVQAGLNCEEFDAEGRI-IRADWKNLSVISAYLPSGSSGDERQQ 121 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L WL + + + K++ FVI GD+N I + + WK+ N + Sbjct: 122 AKY---RFLDVFGPWLDELMREHKKTGREFVICGDWN--IAHKEIDLKNWKSNQKNSGFL 176 Query: 236 -----RFPKEKDSRCNAN------------KNLRNK---------IPIDYFVMDQNAYKF 269 + D R + N+ IDY + Sbjct: 177 PEERAWLTEVFDKRGFVDVFRRLDERPEQYTWWSNRGQAWAKNVGWRIDYQIATPGLAAR 236 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 S +Y ++ R SDH P++IDYD Sbjct: 237 ARSAS----IYKDE-------RFSDHAPLTIDYD 259 >gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL F2-208] Length = 273 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 30/109 (27%), Gaps = 14/109 (12%) Query: 200 ESLVPFVIAGDFNRKINYLGNN----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P +I GDFN + N N + + + Sbjct: 174 AKDSPVIILGDFNTQPNTPTYNYITEKYQDAQLISQKPAKGPT-GSFHDFHPLRPENELE 232 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + F Y + G SDH P++ + D+ Sbjct: 233 KIDYIFVS---------NEFQVSTYETIVDEVEGFSASDHFPVTANLDW 272 >gi|260591557|ref|ZP_05857015.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] gi|260536588|gb|EEX19205.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 113/349 (32%), Gaps = 73/349 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL--- 57 M+R ++ L ++P + + +V N L + +L +DY L Sbjct: 1 MLRLFLTFL-LGVIPLYSEAQSRFTIVELNTENLFDARHDTL--------KNDYEFLPNS 51 Query: 58 ------RQYAKNLD------------------ADIVFLQEMGSYNAV-----AKVFPKNT 88 +Y K L+ D+V L E+ + + + + K Sbjct: 52 PRHWTRAKYWKKLNRTGQTIIACGEDSCGWRLPDLVGLCEVENDSVLFDLTKRSLLRKAR 111 Query: 89 WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + ++ N + +++ + R ++ L+ R + + Sbjct: 112 YEYVMTS---SNDMRGIDVALLYSPFSFR--LLKTDTIRVSLIANM-----QPTRDILYV 161 Query: 149 L-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 ING + VL +H S E P + Q + D I Q++ S ++ Sbjct: 162 KGAIINGDTLHVLLLHAPSR---RGGEMQSQPFRKHVMMQVSNVVDSI-QRRHSDAKVIV 217 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN + +K N S K K+ + +D ++ +N Sbjct: 218 MGDFN-DYADSPSLKPLYKRNLLNVSAQA--KGKNGAKGTYRYHGEWGSLDQILISENLR 274 Query: 268 KFLIQESFSEILY-NEDDIK-------------SRGKRLSDHCPISIDY 302 +++ ++ + E+DIK SDH P+ + Sbjct: 275 SYVLSCHINDAPFLLEEDIKYGGVKPRRDYNGMRYNNGFSDHLPLVLQM 323 >gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 273 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 83/311 (26%), Gaps = 76/311 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 + +VSWN+N L R L + A+ DAD++ LQE A Sbjct: 1 LSVVSWNVNGLRS------LLKKAPR------ALDELARRTDADVLVLQETKLGADGRGA 48 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V E R+ + RK + +++ Sbjct: 49 V-------------DGEGEAPKFLREYGTREYATSTARKG-----YSGTAMFIRDGDWAK 90 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQWLKDWITQK 198 A L + VL L S CF+ ++ L ++ + + I + Sbjct: 91 MKRVEATRLSAGGFDDEGRVLTAELDS-CFVVNAYVPNSGADLKRLPERVEVWERAIREH 149 Query: 199 ----KESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFP 238 + + GD N + + + L+ Sbjct: 150 VRALESRGKAVIYCGDLNVAHEEIDLWGRHAENSKSAGFTPEERAAMTRLLEECDLVDTF 209 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + A + +DY + + ++ Y D+ Sbjct: 210 RAHRPDARAFTYWSYRAGAREKNRGWRLDYILASRRLADSIVDA------YALPDVLG-- 261 Query: 290 KRLSDHCPISI 300 SDHCP+ + Sbjct: 262 ---SDHCPVGL 269 >gi|226940627|ref|YP_002795701.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis HLHK9] gi|226715554|gb|ACO74692.1| Endonuclease/exonuclease/phosphatase [Laribacter hongkongensis HLHK9] Length = 237 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 83/256 (32%), Gaps = 46/256 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + LDAD++FLQE+ +++ + K + + + R + ++ Sbjct: 13 IANELEGLDADLLFLQEVQGRHSL-RARHKAGYLDIPQHDYIAGRLDRHAVYGLNAGYGY 71 Query: 117 -RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDS 172 N + + D R V ++ + ++ L IHL + Sbjct: 72 GHHGNAILTRFPIRQWCNLDLSVNRLESRGVLHCDIKLPGWPCEVTALCIHL------NL 125 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTID 229 + +Q + L +I + ++AGDFN R+ N+ Sbjct: 126 FGHDRR-------KQMEQLSRYIERAVPRGNGLILAGDFNDWRRRANHEF---------- 168 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPI---DYFVMDQNAYKFLIQESFSEILYNEDDIK 286 D L + K+ ++PI D + + + E + Sbjct: 169 -ADELGLQEVHEAVHGRHGKSFPARLPILTLDRIYV--RGLQIVGAEVLRGAPWAT---- 221 Query: 287 SRGKRLSDHCPISIDY 302 LSDH P+S + Sbjct: 222 -----LSDHLPLSAEL 232 >gi|146343131|ref|YP_001208179.1| hypothetical protein BRADO6329 [Bradyrhizobium sp. ORS278] gi|146195937|emb|CAL79964.1| conserved hypothetical protein; putative signal peptide; Ricin-type beta-trefoil lectin domain [Bradyrhizobium sp. ORS278] Length = 570 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 97/311 (31%), Gaps = 36/311 (11%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 IR AL F C+A + ++ S NTL+ + + + L+ Y Sbjct: 3 IRFLASALAFG---CSALLGSPLQAASGTFNTLTYNVAET-PTAYNGGSDAHSKLISCYL 58 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 + IV +QE + A ++ + + N Sbjct: 59 RQFG--IVNVQE--DFLWHAALYDTCDDHPYRTPTSGTAGIGDGLNTLSRYGF---DDLD 111 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 RV A + R + G + ++H +S L + + Sbjct: 112 RVTWDKRADSDALTPKGFSLVRTRLA-----EGVYLDFYNLHAQSGTSSTDLAYSEND-- 164 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-------IDPNDSL 234 Q L +I + ++ GD N + G N + I+ Sbjct: 165 ------VQQLLTYIEA-NSAGNTVMVMGDTNTRYTRAGQNMWEFLHHGFSDAWIEAVRGG 217 Query: 235 IRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 P C + + R I D + N + L S+ + +D + + G +LS Sbjct: 218 SVPPVGDALVCGSTQTARPDCEIVDKVLWRNNGFLNLQASSYVD---RQDALDASGAQLS 274 Query: 294 DHCPISIDYDF 304 DH PI +++ F Sbjct: 275 DHHPIEVNWSF 285 >gi|302885025|ref|XP_003041406.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI 77-13-4] gi|256722307|gb|EEU35693.1| hypothetical protein NECHADRAFT_54419 [Nectria haematococca mpVI 77-13-4] Length = 297 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 23/169 (13%) Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + + I+G ++ + ++H + D + + + W+ P Sbjct: 138 TYMRMTIDGIEVDLYNLHADAG--SDKGDIDARSA------GIDQILAWVNS-NSKGKPV 188 Query: 206 VIAGDFNRKINYLGNN---------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +IAGD N + G + D W + + S + C Sbjct: 189 IIAGDTNDRWANSGRSINKLTDAGFTDSWVQLIRSGSYPQAGA-TADPCKVPAADNKCEI 247 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKRLSDHCPISIDYDF 304 +D L SF+ Y +++ G LSDH PI +++ + Sbjct: 248 VDKVFYRSGDSVKLTATSFN---YASKVFVQADGNILSDHNPIHVEFSW 293 >gi|219111411|ref|XP_002177457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411992|gb|EEC51920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 409 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 45/233 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNIN--------TLSEQEGVSLWKNSVKRTTS 52 M+ ++L F A A + ++S+NI + L ++ ++ Sbjct: 1 MVVPHILGPSAFPTVPMAPPAACLSVLSYNILLPNSMDGWWNYKMYSPPLPESKQHVSSW 60 Query: 53 DYTL--LRQYAKNLDADIVFLQEM-----GSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 ++ LR+ +DADIV LQE+ + + + +F + Sbjct: 61 NFRKDLLRERIATVDADIVCLQEVSPVSFDTDFDFMRELGYDGKEMFKKGRFRPATFWKT 120 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV---LDI 162 S +I T + + + + P D + V L+ Sbjct: 121 SRCEIVTPPVHKDRTLLTAFRVLPPPTVSD------------------PAETHVWYILNC 162 Query: 163 HL---KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 HL K + + S L+++ + E F++ GDFN Sbjct: 163 HLQAGKEGGRRVRQIHEGARSVLTLARKLKQPNP------EQCTAFIVCGDFN 209 >gi|254452409|ref|ZP_05065846.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] gi|198266815|gb|EDY91085.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] Length = 290 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 50/271 (18%) Query: 15 PCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P + +R+ ++N++ L +G + +R + L+ +LDAD+V Q Sbjct: 22 PVQSPSRDTLRVATYNVHYIWLGRAQGDWSVGDWERRKGA----LQAAFVSLDADVVGFQ 77 Query: 73 EMGSY---NAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 EM S+ A + + + + S + I RK + + Sbjct: 78 EMESFGRGQAPQNLTLDWLREQNPGYAAAAVGDPAVFPSTQP--------IFYRKDRLTL 129 Query: 124 LQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENT 176 Q P + +F+ + E I V ++H E Sbjct: 130 RDQGWFFFSDTPDVIYSRTFNGSWPAFTSWAEFEDRDGTIFRVYNLH---------TEYR 180 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + Q + L + + +P + GDFN ++ + Sbjct: 181 SMSN----KQLSVALVAARIAEPAARMPVFVIGDFN-----AIRGSTTLGVLEDANVTFW 231 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 + S + N+ L ID+ Sbjct: 232 PVQG--STFHFNRGLNLFPAIDHIGGSDGIS 260 >gi|218895489|ref|YP_002443900.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] gi|218543762|gb|ACK96156.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] Length = 263 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQFDRL----MERVDSNKLAFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|164687368|ref|ZP_02211396.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] gi|164603792|gb|EDQ97257.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] Length = 215 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 100/281 (35%), Gaps = 68/281 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NI+T ++++ RT + +Y K + DI+ LQE+ Sbjct: 1 MKIISYNIHTGTDKD--------KNRT---LRQMAKYLKIQNCDIICLQEV--------- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + ++ + ++ + + S+ R Sbjct: 41 -LYSQYRMLKFYLQMDGSFAENVSDKQY-------GICIFSKYKILARNHVFLTSKKEQR 92 Query: 144 RAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + V+I G + + V++ HL D + +L+ + L+ I + Sbjct: 93 GFAHIKVKIEGDRYLNVINTHL--GLDKDERVKQINE---ILNFISINLEGNIEDLAGN- 146 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN K Y+ N +D ++ ++ K IDY + Sbjct: 147 ---IVCGDFNEKNIYMNNFNDVAVDLNKDNLPTFA----------------KNRIDYCFI 187 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 E+ + Y D++ +SDH P+ +++ Sbjct: 188 S---------ENLTAKSYTVDEVY-----MSDHFPVIVEFS 214 >gi|116694965|ref|YP_729176.1| extracellular nuclease [Ralstonia eutropha H16] gi|113529464|emb|CAJ95811.1| predicted extracellular nuclease [Ralstonia eutropha H16] Length = 344 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 88/327 (26%), Gaps = 66/327 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-LLRQYAKNL---DADIVFLQEM---G 75 + + ++N+ L+ G+ L+ + + +Y + A L DAD+V QE+ Sbjct: 5 TLSIATFNLYNLN-VPGLPLYTDRNGWSEKEYERKIAWTASQLKLIDADVVGFQELWHGD 63 Query: 76 SYNAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-------- 126 A + + + + + I A VR+ + + Sbjct: 64 GLLAAVEAAGLADAYDVLVPDNA--------NGKGIVCAAIVRRGLLAGEAEWIADFPEK 115 Query: 127 -------SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFC--------- 168 P R +R + + + + + H KS Sbjct: 116 FVLKSKGDDPQTPQISVSIRGFSRPVLHFTIRPREDEPAMHMYVCHFKSKQPTRIDGEAW 175 Query: 169 ----FLDSLENTYSPSCSLLSQQAQWLKDWI---TQKKESLVPFVIAGDFN----RKINY 217 + S + + A+ K + V+ GD N Sbjct: 176 YEKEIYAKHAKAVGAALSTIRRTAEAAALRFMLTDSMKGNNTAVVVMGDINDGQLSNTAN 235 Query: 218 LGNNDD--FWKTIDPNDSLIRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYK 268 + + + + +++ + +D+ ++ + Y Sbjct: 236 ILTEQPAYLVGDSVGGGDIALYTAQTLQEYRDTRDVYYTHVFQDFRESLDHILVSEQLYD 295 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDH 295 L++ I + SDH Sbjct: 296 ---NSKRRRWLFDGLIINNDHLNFSDH 319 >gi|118476126|ref|YP_893277.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] gi|118415351|gb|ABK83770.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] Length = 267 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 87/283 (30%), Gaps = 45/283 (15%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N+ L+ +N +++ L + + + D++ LQE+ V Sbjct: 4 NMKLLTLNCHSWQEENQIEK----IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKE 59 Query: 90 CIFYSTERLINHSKRDSNNDI------------HTAIAVRKKNVRVLQQSYPLLGAKDSF 137 F + + +I +A+ K+ V + ++ + KD+ Sbjct: 60 DNFGLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTT 119 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R+ V + NGK I HL + D E+ Q L + Sbjct: 120 Y-WKTRKIVSATIAYNGKNITFYSCHL--GWWNDEEES--------FKDQVNRL----ME 164 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LR 252 + +S + GDFN G ++ D+ ++ + + + Sbjct: 165 RVDSNELSFLMGDFNNNARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENK 224 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID + I+ S + +SDH Sbjct: 225 HNLRIDLILC---NRSEKIRSSKVVFNGTNRKV------ISDH 258 >gi|68433741|ref|XP_700794.1| PREDICTED: nocturnin [Danio rerio] Length = 432 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 108/326 (33%), Gaps = 35/326 (10%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNI--NTLSE--QEGVSLWKNSVKRTTSDYTLL 57 R L F + + +R++ WNI L E V ++ + Y +L Sbjct: 111 NRPPRLHREFIMTRACSLQNSPLRIMQWNILAQALGEGKDGFVRCPMEALNWSERKYLIL 170 Query: 58 RQYAKNLDADIVFLQEMGSY-NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIA 115 + D+V LQE+ Y + V + + + +NN A+ Sbjct: 171 EEI-LTYRPDVVCLQEVDHYFDTFQPVLSSLGYQSSFCPKPCSPCLDVHNNNGPDGCALF 229 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 ++ ++L ++ L A + A L ++ G+ V HLK+ ++ + Sbjct: 230 FNRRRFQMLHTAHLRLSAMMLKTNQVAVVAT-LRCKLTGRVFCVAVTHLKARSGWEAFRS 288 Query: 176 TYSPSCSLLSQQAQWLKDWITQK-----KESLVPFVIAGDFN---------RKINYLGNN 221 + L QQ + + + +P ++ GDFN + Sbjct: 289 AQGAN---LLQQLHEITSQSNPEMHQDDQTEGIPLIVCGDFNAEPNEEVYRHFRSSSLGL 345 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEI 278 D +K + + + R + +DY + A++ L S +I Sbjct: 346 DSVYKCLSDDRTTEPPYTSWKIRPSGECC----STLDYIWYSEKAFEVDAVLRIPSEEQI 401 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 D + S SDH + D F Sbjct: 402 --GPDRLPSFHY-PSDHLSLVCDLSF 424 >gi|113969313|ref|YP_733106.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] gi|113883997|gb|ABI38049.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] Length = 377 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 45/242 (18%) Query: 15 PCTASVAQK-VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL----DADIV 69 +A+ Q +++ + N+ E + + + + Q+ L DIV Sbjct: 9 SSSANTTQSNIKIATVNLFNFIEPPS-AFYDFENIYSHGQWQKKCQWFSELLNQHHPDIV 67 Query: 70 FLQEMGSYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIA---VRKKNVRV 123 QE+ S + ++ + + S + ++ + + + V V Sbjct: 68 GFQEVFSPEPLRQLALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEV 127 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLD 171 + L ++ SFSR R V + +H KS L+ Sbjct: 128 HLVAAMGLSSEFSFSRKVLRATVAV---PQIGPCDCYVVHFKSKRPGLALEPHPLGLSLN 184 Query: 172 SLENTYSPSCSLLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRK 214 + + + + L + Q L W + +++ + P ++ GDFN Sbjct: 185 APSDLKLHAETKLLTE-QALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFNDS 243 Query: 215 IN 216 ++ Sbjct: 244 LS 245 >gi|328709897|ref|XP_003244099.1| PREDICTED: nocturnin-like isoform 2 [Acyrthosiphon pisum] gi|328709899|ref|XP_001951703.2| PREDICTED: nocturnin-like isoform 1 [Acyrthosiphon pisum] Length = 417 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 60/155 (38%), Gaps = 15/155 (9%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RK 118 + DI+ LQE+ ++ +++ ++ + + ++N+ A+ + Sbjct: 171 ILKHNPDIICLQEVDHFDFLSRALATQSYSGLFVPKPDS-PCVYINDNNGPDGCAIFYKN 229 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +L++ +L S + + L + K++ V HLK+ Sbjct: 230 DKFDLLEKHDKVLQVWTVHSNQVS-LLLVLKDKSTQKELCVSTTHLKA---------RKG 279 Query: 179 PSCSLL-SQQAQWLKDWITQKKESLVPFVIAGDFN 212 S L ++Q + L +I+ P ++ GDFN Sbjct: 280 ALLSTLRNEQGKDLLQFISSHAA-DRPTIVCGDFN 313 >gi|255036167|ref|YP_003086788.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254948923|gb|ACT93623.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 280 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 102/309 (33%), Gaps = 48/309 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++K+ L L+ L+ TAS AQ + + S+N+ + +GV+ W N R + L+R Sbjct: 1 MKKFALYLLAMLLVTTASFAQKTATINVASYNLRYNTPNDGVNAWPN---RKENVKGLIR 57 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 + + DI +QE + V + + S AI +K Sbjct: 58 FH----EFDIFGVQE-ALVGQLKDVAELPEFAYYGKGRDDGKEGGEHS------AIFYKK 106 Query: 119 KNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 ++L+ P + NR E KK + ++H F Sbjct: 107 DRFKLLKSGDFWLSETPDKPGLGWDATCCNRICSWAQFEDLKTKKKFFFFNVH-----FD 161 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S L+ ++ + + ++ GDFN D Sbjct: 162 HQGVEARRQSGHLMVKKIKEI--------AGNSTAILTGDFNSTPETEQIKTLGAALNDT 213 Query: 231 NDSLIRFPKEKDSRCNANK-NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +D + P + N+ K + K IDY + +N + Y Sbjct: 214 HDVTKQAPYGPEGTFNSFKFDAPMKARIDYIFVSKN---------VDVLKYGVLTDSKEQ 264 Query: 290 KRLSDHCPI 298 + SDH P+ Sbjct: 265 RYPSDHQPV 273 >gi|166710547|ref|ZP_02241754.1| hypothetical protein Xoryp_03535 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 288 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 97/301 (32%), Gaps = 45/301 (14%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 17 ILALCITLPAFAASAPAPLRVMSFNVR-------VPVDSDGDKRWTVRRTSMVALIKQTH 69 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + R +R +D H + + V++ Sbjct: 70 PDVFGTQELVQEQAQYLASHLPAY-------RWFGKGRRADGSDEHMGVFYDSNALSVIE 122 Query: 126 QSY------PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTY 177 P + S++ R L E + ++ ++L+ HL D E Sbjct: 123 SGDFWLSETPEVPGSSSWNTDLPRMVTWALFERRNDTRRFYLLNTHLP---HRDQDEAAR 179 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ + L +P V+ GDFN + ++T+ L Sbjct: 180 EHGARVILSRIATLPA--------DIPVVVTGDFN-----SDPDQGTYRTLTAV--LGDA 224 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 K + D+ +++ + ++ D + G SDH P Sbjct: 225 RAHVAKPQGPEKTFQ-----DFTTQPTRRIDWILFRGLTPTRFSTLDARPGGILPSDHYP 279 Query: 298 I 298 + Sbjct: 280 V 280 >gi|94967527|ref|YP_589575.1| endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] gi|94549577|gb|ABF39501.1| Endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] Length = 246 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 94/290 (32%), Gaps = 59/290 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R+ ++N V + +RT D + + LDAD++ +QE+ Sbjct: 2 RLRIATYN---------VHKCRGLDRRT--DPERIATVIRELDADVIAMQEILDVRDGH- 49 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 P + +T L + R N A N+ + + D R Sbjct: 50 --PGHDQARRIAT-NLQEYEWRFGENRSLHGGAY--GNMTLSRLPITASENYDITWRHRE 104 Query: 143 RRA---VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR ++ + + + + ++HL + + L + + ++ Sbjct: 105 RRGCLRTDVSL-TDRSVLHLFNLHL--GTSFVERRHQAR----------KLLTEAVLRRA 151 Query: 200 ESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 E P ++ GDFN R + + ++ I+P L +R + Sbjct: 152 EFTGPRIVLGDFNEWTRGLASRLMGTE-FEAIEPRTHLRY------ARTYPGVMPL--LH 202 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 +D+F D + I L SDH P+ ++ Sbjct: 203 LDHFYFD------------RTLSLESYCIHRSRTALIASDHLPLVSEFSL 240 >gi|229820609|ref|YP_002882135.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566522|gb|ACQ80373.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 382 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 83/276 (30%), Gaps = 41/276 (14%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDS 106 + + + ++DAD++ + E A+ + + + + D Sbjct: 125 DETGIRMTARVVHDVDADVLAVIEAEDRPALLRFDAELLGDHYRHLMLVDGNDER-GIDV 183 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + + V + FSR + V +G I VL H KS Sbjct: 184 GLLTKPGFPIGAIHSHVDTED----AVGLVFSRDCAQYEVT---TPSGTVIQVLVNHFKS 236 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND-DFW 225 QA+ ++ + + V+ GD N +G Sbjct: 237 QSGGGGERRRR---------QAEAVRAIVDELVAVGEHVVVLGDLNEGSPAVGQVPVSLA 287 Query: 226 KTIDPNDSLIR------FPKEKDSRCNANKNLRNKIPIDYFVMDQN-AYKFLIQESFSEI 278 + + L+ F + +RN+ +DY ++ + A +F F Sbjct: 288 ALFESDGPLVSCFDLDGFDVGPRPGTFDSCGIRNR--LDYILLSRGLAARFTSGRVFRTG 345 Query: 279 LYNE-----------DDIKSRGKRLSDHCPISIDYD 303 L+ ++ + + SDH + ++ D Sbjct: 346 LWGTRVTRPTAWETYPEMLTGTHQASDHAALVVELD 381 >gi|254463331|ref|ZP_05076747.1| endonuclease/exonuclease/phosphatase, putative [Rhodobacterales bacterium HTCC2083] gi|206679920|gb|EDZ44407.1| endonuclease/exonuclease/phosphatase, putative [Rhodobacteraceae bacterium HTCC2083] Length = 402 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 82/254 (32%), Gaps = 66/254 (25%) Query: 25 RLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + S+N+ L +EQE + + + L LDAD+V QE+ A+ Sbjct: 5 TVASFNVKNLIGAEQEYYTFQSYTTEEHAWKAAWLADQIVTLDADVVGFQEIFEEAALRA 64 Query: 83 VFPKNTWCIFYS-TERLINHSKRDSNNDIH------------TAIA-------------- 115 V + S + + + SKR I A A Sbjct: 65 VIREADEIGEESNEDVIPDRSKRYRKKAIFRKLKYAGYRDAALAFAPNANDGAPGQRRPG 124 Query: 116 --------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIW 158 + + L + +G D +R + +L V + + + Sbjct: 125 VAILSRFGFEGTPDIIQDLPEPLDIPFQDMGGGDGGHYRISRLSRPILKARVPMGREVVT 184 Query: 159 VLDIHLKS--FCFL-------------DSLENTYSPSCSLLSQQAQWLKDWITQKK---- 199 V + HLKS F+ + ++ + + + + W+ +++ Sbjct: 185 VFNTHLKSKLGEFVRPEGAEFAPESDLANYDSVGRALGAARAALRRMAEAWVLRREIVAE 244 Query: 200 -ESLVPFVIAGDFN 212 ++ P ++ GDFN Sbjct: 245 LKAGHPVIVMGDFN 258 >gi|158338364|ref|YP_001519541.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] gi|158308605|gb|ABW30222.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] Length = 268 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 107/308 (34%), Gaps = 72/308 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ SWN+N RT ++ L Y +++ D++ LQE + + Sbjct: 1 MKIASWNVN--------------SIRTRLEHVLDWLYTQSI--DVLCLQETKVIDEDFPK 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 F + + ++ S ++ + +A+ R V PLLG + Sbjct: 45 ASFEEEGYQVYVSGQKA------------YNGVALISRTTLSEVSSGFTPLLGPDLTQHY 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 +R + ++ + +L++++ + +DS + Y + + L ++ + Sbjct: 93 DQQKRLITGIISPG---VRILNLYVPNGSEIDSDKYVYK------LEWLELLHHYVEKLL 143 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFP--------KEKDSR 244 + +I GDFN ++ +D T +L + ++ +S+ Sbjct: 144 SQDPQHLLICGDFNIALDDRDMHDPSKREAHIMSTDRERQALQKVLALGLEDVFRKFNSK 203 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ID+ + Y+ + D R + SDH Sbjct: 204 SEQFSWWNYRAGSFQRNKGWRIDHHYLTPTLYEQATACTI-------DAAPRRLPKPSDH 256 Query: 296 CPISIDYD 303 P+ ++ D Sbjct: 257 APVVVEID 264 >gi|141447778|gb|ABO87600.1| DNA lyase [Coccidioides immitis] Length = 606 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 93/347 (26%), Gaps = 104/347 (29%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTT-SDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +RL +WN+N G+ + R + + L+ DI+ QE + Sbjct: 2 PLRLTTWNVN------GIRNPFSYPPRAENKSFERM---FDILEGDIIVFQETK----IQ 48 Query: 82 K--------VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYP 129 K + P W F+S L H K S I+T + +R + S P Sbjct: 49 KRDLRDDMVLIPG--WDCFFS---LPRHKKGYSGVVIYTRCSACSPIRAEEGLTGTLSSP 103 Query: 130 LLGAKDSFSRAGNRRAVE-------------LLVEINGKKIWV---LDIHLKSFCFLDSL 173 ++ + ++ G+ + + + L +C + Sbjct: 104 GSPLPYRELPEDDQIGGYPTPEQLELLPIDPVTIDSEGRCVILEFPAFVLLGVYCPANRD 163 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---------RKIN-------- 216 E + L+ L + V+ GD N I Sbjct: 164 ETRDVFRAAFLN----VLDMRVRNLTAMGKRVVLMGDMNISREVIDSAHIIEAIRKGKTT 219 Query: 217 ----YLGNNDDFWKTI----------DPNDSLIRFPKEKDSR-------CNANKNL---- 251 + + + + ++ K C + Sbjct: 220 ETEFLSSPSRRLFNQLVGGGGARAKDSEDTPVLLDVCRKFHPDRLGMYTCWEQRVNARPG 279 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDY + + + + + E G SDHCP+ Sbjct: 280 NYGARIDYVLCSVDMEDWFTESNIQE-----------GLMGSDHCPV 315 >gi|328886193|emb|CCA59432.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712] Length = 271 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 90/300 (30%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE A+ Sbjct: 11 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCVQET---KCTAEQ 51 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP R + + + +A+ + + L G + R Sbjct: 52 FPT-------EELRALGYESVVNATGRWNGVALVSRVGLADVVTG-LPGGPEYDGMDEPR 103 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y + + LK + + Sbjct: 104 A-----ISATCGPVRVWSVYVPNGREVAHEHYAYK------LRWLEALKAAVAEDAAGDR 152 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPID 258 PF + GD+N +DD W E+ + + + + D Sbjct: 153 PFAVLGDYN----IAPTDDDVWDRAAFEGLTHVTEPERAALAGLREAGLSDVVPRPLKYD 208 Query: 259 YFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + ++ + + E S R SDH P+ +D D Sbjct: 209 HPFTYWDYRQLCFPKNRGMRIDLVYGNKPFAEAVTDSYVDREERKGKGASDHAPVVVDLD 268 >gi|148653062|ref|YP_001280155.1| exonuclease III [Psychrobacter sp. PRwf-1] gi|148572146|gb|ABQ94205.1| Exodeoxyribonuclease III [Psychrobacter sp. PRwf-1] Length = 271 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 73/285 (25%), Gaps = 67/285 (23%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L +D D++ LQE + ++ + + H Sbjct: 18 QLEAVRDIIDPDVMGLQETKVHDEQFPLELVESLGYHV------------EFFGQKAHYG 65 Query: 114 IA-VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A V K +Q+ +P R NG+++ VL+ F Sbjct: 66 VALVSKVKPIFVQKGFPDEPEDAQKRFIHARYVF------NGQEVDVLN-----GYFPQG 114 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------------RKIN 216 + + L +I K +I GD N R ++ Sbjct: 115 ESRNHETKFPMKRAYYADLNQYIDALKAEGRTLIIMGDMNIAPEDNDIGIGEKNAKRWLS 174 Query: 217 Y------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----------PIDY 259 + + + S D+ + + ID+ Sbjct: 175 QGKTSFLPEEREWYSALMSRELSDTYRIHYPDAN-DTFSWFDYRSRGFDDDPKRGLRIDH 233 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Q+ I S ++ SDH PI + F Sbjct: 234 ILCTQDIEDKCIDAGIS-------YELRAMEKPSDHAPIWASFKF 271 >gi|241888987|ref|ZP_04776291.1| endonuclease/exonuclease/phosphatase family protein [Gemella haemolysans ATCC 10379] gi|241864236|gb|EER68614.1| endonuclease/exonuclease/phosphatase family protein [Gemella haemolysans ATCC 10379] Length = 354 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 82/212 (38%), Gaps = 30/212 (14%) Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + I+TA + +N R Q + P + + + VE + K + +++ HL Sbjct: 159 VKSGIYTATSFNVENARRFQMAIPFTFPERLANLKRGFSVIYTKVENSDKHLVLINAHLD 218 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---- 221 ++ +S + Q + L ++I + + ++ DFN+ + L + Sbjct: 219 AYDKGNSGK----------KAQMKQLLEFIDYEYKKGNYVLVGADFNQSLKTLTQDEINV 268 Query: 222 --DDFWK-------TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + W+ + +L+ + +R N +++ F++D ++ Sbjct: 269 VPKELWRAENLDKSMLPAGFNLLYDESKNSARLNNKPYVKDSEGTYGFIIDG----YIAS 324 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + E + ++ R SDH P+ + Y Sbjct: 325 DNIEVL---EVETLNQEYRYSDHNPVKLRYKL 353 >gi|260770890|ref|ZP_05879819.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] gi|260614127|gb|EEX39317.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] Length = 877 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 103/377 (27%), Gaps = 98/377 (25%) Query: 22 QKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ S+N +N + G ++ R S+ + LDADIV L E Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSMQQAKIVNAILRLDADIVGLME 533 Query: 74 MG-----SYNAVAKVFP---------KNTWCIFYSTERLINHSKRDS---NNDIHTAIAV 116 + A+ ++ K + + ++ I T + Sbjct: 534 IENNGFGDGAAIRQLVDQLNERIDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593 Query: 117 RKKNVRVLQQ---SYPLLGAKDSFSRAGN---------RRAVELLVEI--NGKKIWVLDI 162 R K V++LQ P A + + G R + ++ + I V Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGKNYQRDTLAPTFKVKGGNETITVAVN 653 Query: 163 HLK---SFCFLDSLENTY----------SPSCSLLSQQAQ-WLKDWITQKKESLVPFVIA 208 HLK S C+ D+ + SC L + + + VI Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGADADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710 Query: 209 GDFN--------------------------RKI---NYLGNNDDFWKTIDPNDSLIRFPK 239 GD N R DD L Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGEQPQFGDDGAVITQGFGYLSAMEL 770 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSEILYNED-----DIKSR 288 + +D+ ++ + ++ L++ + D+ Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830 Query: 289 G--KRLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 ADHFRASDHDPAVVELN 847 >gi|225707660|gb|ACO09676.1| Deoxyribonuclease gamma precursor [Osmerus mordax] Length = 268 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQ 264 +I GDFN +Y+ + I + + + N +N D V+ Sbjct: 164 MILGDFNADGSYVSKKEMKLIRIRSDKNFHWLISDDVDT---TANHKNDHTYDRIVVYGD 220 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + ++ S + ++ + + L SDH P+ ++ Sbjct: 221 DMLAAVVPNSAKPFNFQQEYGLTNAQTLDVSDHYPVEVEL 260 >gi|282855240|ref|ZP_06264572.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|282581828|gb|EFB87213.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|314924052|gb|EFS87883.1| exodeoxyribonuclease III [Propionibacterium acnes HL001PA1] gi|314965024|gb|EFT09123.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA2] gi|314983099|gb|EFT27191.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA3] gi|315090643|gb|EFT62619.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA4] gi|315093843|gb|EFT65819.1| exodeoxyribonuclease III [Propionibacterium acnes HL060PA1] gi|327326466|gb|EGE68255.1| exodeoxyribonuclease III [Propionibacterium acnes HL103PA1] Length = 297 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 42/192 (21%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----ITQKK- 199 + V++ + V ++L D + + ++ +L + + +++ Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDP---ANEKAIAKQDRKMAFLAGFRDHLVRRRQE 172 Query: 200 --ESLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFPKEK 241 F++ GDFN +L F + P+ + + Sbjct: 173 CTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQH 232 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + I D S +R Sbjct: 233 PDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------DRDPSYSERT 285 Query: 293 SDHCPISIDYDF 304 SDH + IDYD Sbjct: 286 SDHAAVVIDYDL 297 >gi|49479897|ref|YP_034699.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196045232|ref|ZP_03112464.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218901573|ref|YP_002449407.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225862411|ref|YP_002747789.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228925624|ref|ZP_04088713.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931871|ref|ZP_04094767.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120029|ref|ZP_04249284.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|229182756|ref|ZP_04309996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|49331453|gb|AAT62099.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196023816|gb|EDX62491.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218537236|gb|ACK89634.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225785970|gb|ACO26187.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228600729|gb|EEK58309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228663495|gb|EEL19080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228827851|gb|EEM73589.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834102|gb|EEM79650.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 263 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 41/259 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 ---------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTY-WKTRKIVSATIAYNGKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ +S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFS 276 ++ D+ ++ + + ++ + ID + I+ S Sbjct: 185 YEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKV 241 Query: 277 EILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 242 VFNGTNRKV------ISDH 254 >gi|110346936|ref|YP_665754.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110283047|gb|ABG61107.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 326 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 79/263 (30%), Gaps = 48/263 (18%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V F P ++ + + +V+ N+ +D+ L A Sbjct: 83 VFPFFFLPQPASSQIGAPLTVVTANV-------------YVDNPDPADFLSLPSIAA--- 126 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ADI+ LQEM + + W S + N + L Sbjct: 127 ADILVLQEM-TPRWQDALAASGIWPFESSRDLHANTDMK-------------------LF 166 Query: 126 QSYPLLGAKDSFSRA---GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 +P+L A+ + G R AV + + + + V +H ++ + + Sbjct: 167 SRFPILTARTVSPDSADTGGRFAVRYELLVGARTLIVYAVHPQT----PRSPRMWRERSA 222 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 L AQ L+ + P V+AGD+N D T +P Sbjct: 223 YLRDLAQALRS-----EPHDTPVVVAGDWNTASWSPFFKDLLSSTGYRTTESRWWPLPTR 277 Query: 243 SRCNANKNLRNKIPIDYFVMDQN 265 + PID V+ Sbjct: 278 FSIRFGSWTQLGTPIDRIVLTPA 300 >gi|295681288|ref|YP_003609862.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295441183|gb|ADG20351.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 290 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 106/319 (33%), Gaps = 70/319 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI D + + A+ L D D++ LQE+ Sbjct: 1 MRLVDWNIQW-----------GCGVDGRVDLGRIVREARALCDFDVLCLQEVTRGFNEEP 49 Query: 75 -----------GSYNAVAKVFPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + +A + P+ S + S+ AI R + Sbjct: 50 AAGGLKGAPSSDQFAELAALLPEMTVLDAIGSDLPSLGASRHRRQFGN--AIVTRLPVRQ 107 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-C 181 VL+ S P D + R A+E ++E + + V+ HL+ F + + Sbjct: 108 VLRHSLPWPA--DPAKPSMLRVALEAVLETDVGPLRVISTHLE---FYSEKQRLAQVARL 162 Query: 182 SLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPND 232 L Q+A + ++ PF V+ GDFN + F + ++P Sbjct: 163 RELHQEACDHARSPARGEKPDSPFADTARPLSAVVCGDFN----SAFEDTAFCRMLEPIA 218 Query: 233 SLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--- 288 F + +R + + + D+ ++ + ++ D+ +R Sbjct: 219 DAPTFV-DAWARAHPGEPRAATVGLYDH-------EQWPDGPFACDFVFVTQDLGTRIAS 270 Query: 289 -----GKRLSDHCPISIDY 302 R SDH P+ ++ Sbjct: 271 CEVDPHSRSSDHQPMWLEL 289 >gi|167585165|ref|ZP_02377553.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 274 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 56/247 (22%) Query: 12 FLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 VP A + VSWN+ K + + +R + ++ AD+ Sbjct: 7 LSVPFAEPHAAPDELTAVSWNL-----------HKGRTPLGFTAWNAMRDWMRSTHADVY 55 Query: 70 FLQEMGSYNAVAKVFP------------KNTWCIFYSTERLINHSKRDSNNDIHTAIAV- 116 FLQE A+A+ P + + + + + I V Sbjct: 56 FLQE-----AMARRLPRPMLAPGFGAPMNDAYDDVWHCQAT--EIAHALDWQIALGPNVF 108 Query: 117 ----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 R N + L G D + RR + + + + +L HL Sbjct: 109 KPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHL------ 162 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + L +Q W+ WI + + P V+AGDFN ++ ++ + I Sbjct: 163 -----ALTRAARL--RQMHWIAHWIVRHAKDG-PLVLAGDFN---DWRNDSIPLFGEIGL 211 Query: 231 NDSLIRF 237 + Sbjct: 212 TEVATLL 218 >gi|13473422|ref|NP_104989.1| hypothetical protein mlr4014 [Mesorhizobium loti MAFF303099] gi|14024171|dbj|BAB50775.1| mlr4014 [Mesorhizobium loti MAFF303099] Length = 289 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 94/320 (29%), Gaps = 73/320 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++LV++NI G+ L D + + AD+V LQE+ Sbjct: 1 MKLVTYNIQY-----GIGLDG------QYDVARIADAVR--GADVVALQEVTRNNPRNGG 47 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----KNVRVLQQSYP 129 + + P + + ++ S S+ ++ I T + K L ++ Sbjct: 48 RDMVAEIGEALP-DYFAVYGSNFEANIGSRIENGRAITTTFQLGNMMLSKTPIHLSRNLL 106 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS--QQ 187 L ++ R A+E L+E I IHL ++ LL+ + Sbjct: 107 LPRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRRRLLNYALE 166 Query: 188 AQWLKDWITQ----KKESLVPFVIAGDFN----------------RKINYLGNND----- 222 L + + + FV GDFN + D Sbjct: 167 GGALSG-VAEIGLPELPHPEAFVAMGDFNMLAGSPEYVELAGRPDHQFGMPLTADFAVDA 225 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + +D + + + +K IDY + + L + Sbjct: 226 AVRLNVTGDDLASWVDPKDPANTSRHKR------IDYVFTSASPARSL-----------Q 268 Query: 283 DDIKSRGKRLSDHCPISIDY 302 SDH P+ + Sbjct: 269 HLWVDHQATGSDHLPVWAEL 288 >gi|329955242|ref|ZP_08296199.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328526241|gb|EGF53260.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 370 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 32/175 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + +Y + D++ QE F N S R ++H + ++ Sbjct: 136 IARYMRQQHVDVLCFQE----------FGGNKHFTADSLRRALSHWQYALIPADD---SI 182 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-KSFCFLDSLE- 174 R + YPL G + + ++ + I +L+ HL + + + Sbjct: 183 RGLLPIAVFSRYPLTGGRFITYPHSSNCSMLCDIVAGTDTIRLLNNHLQTTGVSRNRKKW 242 Query: 175 ------NTYSPSCSLLSQQAQWLKDWITQKKES-----------LVPFVIAGDFN 212 + + A+ L + ++ P ++ GDFN Sbjct: 243 ERELTTDNTRREAQAVQDAAETLHENFVKRAAQTDSICHLAIAAPHPVLVCGDFN 297 >gi|301605741|ref|XP_002932509.1| PREDICTED: deoxyribonuclease-1-like [Xenopus (Silurana) tropicalis] Length = 282 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 41/117 (35%), Gaps = 13/117 (11%) Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 ++ W + GDFN +Y+ ++D + N+ + N Sbjct: 173 DIMEKW------QTDNMIFLGDFNAGCSYVTDSDWDNIRLRTNEQFAWLIPDATDTTVGN 226 Query: 249 KNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ + ++Q+S + + ++ + L SDH P+ ++ Sbjct: 227 TCCAY----DRIVVSGADLQEAIVQDSVKVFDFQKKYKLTQEEALAVSDHFPVEMEL 279 >gi|262199576|ref|YP_003270785.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] gi|262082923|gb|ACY18892.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] Length = 301 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 93/313 (29%), Gaps = 59/313 (18%) Query: 23 KVRLVSWNINTL--------------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 +VR+VSWN+N L + + ++ R R++ + +DA I Sbjct: 4 RVRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVDATI 63 Query: 69 VFLQEM-GSYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 V +QE+ +A+ ++ W ++ + + K Sbjct: 64 VGVQEVRARRDALPRRLLQPRGWHAHLVEAERAG----------YSGVGLYAKLA--PDG 111 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + L D + A ++ V +++ + + N + Sbjct: 112 ADTALAGGDFDREGRLQIAHF-------GRLSVANVYFPNG----NGSNRDNSRVPFKLD 160 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN--RK---INYLGNNDDFWKTIDPNDSLIRFPKEK 241 + L D + +++ ++ GDFN + + N + R ++ Sbjct: 161 FYRALFDALGALRDAGQRVLVMGDFNTAHRDIDLARPKQN----RKTSGFLPEERAELDR 216 Query: 242 -DSRCNANKNLRNKIPIDYFV-------MDQNAYKFLIQESF---SEILYNEDDIKSRGK 290 + + + ++ + + I F + + Sbjct: 217 WVAAGWVDTFRHFEPGPGHYTWWSQRAGVRARNIGWRIDYVFACPEAMPFVRSAFLMPQV 276 Query: 291 RLSDHCPISIDYD 303 SDHCP + D Sbjct: 277 GGSDHCPHGVVLD 289 >gi|167523084|ref|XP_001745879.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775680|gb|EDQ89303.1| predicted protein [Monosiga brevicollis MX1] Length = 364 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 106/345 (30%), Gaps = 86/345 (24%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V+ ++ P A+ L ++NI E K S +D + Sbjct: 14 VVLVLTIGGPWLAAGRTTATLAAFNIQVFGET------KASKPDVMADIVSICHNF---- 63 Query: 66 ADIVFLQEM--GSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDS--------NN 108 D V +QE+ S A+A + P I + R S ++ Sbjct: 64 -DFVAIQEIRDASSEALATLMDALNENQPTALQYINITGPREGTTSSKEQYAFVYRPARI 122 Query: 109 DIHTAIAV------------------------RKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 +H A A+ R L+ PL+ + R Sbjct: 123 RVHDAFALNMSETFERPPMAAIVEVLTPGSSNRSSTPAALRGEAPLITPG---GPSSPRY 179 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 V + + VL +H K LE + QA+ I + + P Sbjct: 180 PVTSSLASSAGLFQVLVLHAKPSSDATYLELSALD-------QARQ----IATQYAGVEP 228 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PKEKDSRCNANKNLRNKIPIDY 259 V+AGDFN +YL + + TI + + +S C P D Sbjct: 229 TVLAGDFNAGCSYLPADKEAEVTIFKSPYTVLINDSADTTSTNSVC----------PYDR 278 Query: 260 FVMDQNAYKFLIQESF---SEILYNEDDIKSRGKRLSDHCPISID 301 V N ++Q +N D R + +SDH PI+ + Sbjct: 279 IVTFGNIGSRILQSGIINTEAAPFNFDQ--ERAEAVSDHYPIAYE 321 >gi|315104061|gb|EFT76037.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA2] Length = 297 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 42/192 (21%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----ITQKK- 199 + V++ + V ++L D + + ++ +L + + +++ Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDP---ANEKAIAKQDRKMAFLAGFRDHLVRRRQE 172 Query: 200 --ESLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFPKEK 241 F++ GDFN +L F + P+ + + Sbjct: 173 CTAQGRHFLVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQH 232 Query: 242 DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + IDY + I D S +R Sbjct: 233 PDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAITSEI-------DRDPSYSERT 285 Query: 293 SDHCPISIDYDF 304 SDH + IDYD Sbjct: 286 SDHAAVVIDYDL 297 >gi|322421580|ref|YP_004200803.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320127967|gb|ADW15527.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 258 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 91/289 (31%), Gaps = 54/289 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++N++ L+ + + + Q DI+ LQE+ + Sbjct: 7 TFTVMTYNVHRLTGNDRHTSA-----------ARVAQVIDTYRPDIIALQELPGARS-RP 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + L V ++ L ++ L ++ + Sbjct: 55 EVGGACQDLAHELALLAPRENHYQMERERWGNVVFSRHPMRLVRAG-GLHPENRYRTMVP 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKE 200 R + + ++I G+K+ +++ HL QA+ L +W+ + Sbjct: 114 RGVLWVEIDICGQKLQLVNTHL--GLTPRERNY-----------QAKVLAGPEWLAHPEC 160 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI--- 257 P ++ GDFN ++ + +D +SL + + +PI Sbjct: 161 RP-PVLLCGDFNALPSWSIHKRLKNALMDEQESLKFG--------HTKFTFPSNLPIVRF 211 Query: 258 DYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ + + LI + + SDH P+ + Sbjct: 212 DHIFISPDLAVESELIPRTKLTTVA------------SDHLPLIVKLRL 248 >gi|74317491|ref|YP_315231.1| hypothetical protein Tbd_1473 [Thiobacillus denitrificans ATCC 25259] gi|74056986|gb|AAZ97426.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 273 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 28/183 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST----ERLINHSKRDSN 107 D + ++LD D + LQE+ S + + + + L + + Sbjct: 27 RDAARIATVIRDLDCDAIGLQEVDSRAGPH---ADSKQLEYLAEATGMQALAGPTILRHD 83 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 D A+ R+ + V + + R A+++ ++++G ++ V+ HL Sbjct: 84 GDYGNALLTRRPILAVRRHDLSFRSRE-------PRGALDVDLDVHGHRVRVIVTHL--G 134 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 Q + L + + P V GD N + Sbjct: 135 LRPAERRY-----------QVKLLLKLLHPVEP-GQPVVALGDINEWLPLSRPLRWMHGL 182 Query: 228 IDP 230 + P Sbjct: 183 LGP 185 >gi|299756331|ref|XP_001829256.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis cinerea okayama7#130] gi|298411628|gb|EAU92582.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis cinerea okayama7#130] Length = 434 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 82/294 (27%), Gaps = 67/294 (22%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 + R + L+ DI+ LQE+ + + + + H+K Sbjct: 26 AKNREER-IEAIAHELSTLNHDIIALQEI--------WVHSDYQKVQERVSKRLPHAKFF 76 Query: 106 SNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRA----GNRRAVELLVEINGKKIWV 159 + + +A+ R + Y L GA + G A +++ ++ V Sbjct: 77 YSGALGAGLAIFTRYPIISTSVVPYSLNGAPIDVAAGDWFVGKAAASVVILHPILGQVQV 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----ITQKKESLVPFVI-AGDFNR- 213 + HL + D E + + + W + ++ + +VI GDFN Sbjct: 137 FNTHLFAKGGEDGPEFLRAH---------RLVGAWEFAKLARQAAEVGRYVIALGDFNSI 187 Query: 214 --------KINYLGNNDDFW----------------------KTIDPNDSLIRFPKEKDS 243 +N+ D W I + L + K Sbjct: 188 PPTLPMSIILNHASLTDA-WTATHPGYESGPVPKTALEAVERHGITADSPLNTWSAGKRP 246 Query: 244 RCNANKNLR--NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + P+ + L + + + SDH Sbjct: 247 HGWGKRLDYCLYRQPVRH--ASDKPVPNLRATDCKVVF--TEHVPGYTFSFSDH 296 >gi|302879657|ref|YP_003848221.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] gi|302582446|gb|ADL56457.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] Length = 249 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 95/289 (32%), Gaps = 53/289 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA-- 79 Q + + ++NI +G S + V LR+ L+ADIVFLQE+ + Sbjct: 2 QTLTVATYNI-----HKGFSHFNGRVVMHE-----LRERLHELNADIVFLQEVQGEHTGH 51 Query: 80 VAKV--FPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGA 133 + +P F + R + + K H A+ R V+ L A Sbjct: 52 AGRFANYPDGAHHEFIADRRWPHSAYGKNCVYEAGHHGNAILSRYPIVQTLNTDI---SA 108 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 SR + L +G+++ L H F + Q + L + Sbjct: 109 HRFESRGLLHCEIAL---PDGQRLHSLCAH-----FGLFARGRRA--------QTRALIE 152 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ + V +IAGDFN N +G + +D + +R + Sbjct: 153 YVQHEIPPDVQVIIAGDFNDWRNQMGA--VIASELGMHDVFQLH-GGRVARSFPARLPLF 209 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +D M + +RLSDH IS Sbjct: 210 R--LDRIYMRGFTVAQAEVHA-----------GGAWQRLSDHAAISATL 245 >gi|218663832|ref|ZP_03519762.1| hypothetical protein RetlI_33637 [Rhizobium etli IE4771] Length = 368 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 45/212 (21%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L L + T S+A V++VSWNI S ++ + R SDY + A L Sbjct: 6 SLLLASGTLLATHSLAADVKIVSWNI-------AASPYEQVLAR-ASDYKTM---ADTLS 54 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D++ L E+ + + W +Y+T + + + + + V++ Sbjct: 55 PDVIVLIELTGRTDIKAIADAIGWQTYYATVSDGQVQGDEIHASLEVGVLSKIPITSVIE 114 Query: 126 --------------QSYPLLGAKDSFSRAGNRR----AVELLVEINGKKIWVLD------ 161 +S P + + + + + + ++ + + Sbjct: 115 FDPKPEGRTHPVMTKSKPDGDSSIPVTEMPLKGTDMMGLAVT-DRGTLRVDLANGLTVFP 173 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 +HLKS + +C Q LK Sbjct: 174 VHLKS---------NSNDACYAADQSIGHLKK 196 >gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 788 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 98/316 (31%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GTVNDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPNNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLATVPKLLDKNVVRIGDENPLFES-TRKPLAAEFMFQGQNLVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + + ++ +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|225864161|ref|YP_002749539.1| putative secreted protein [Bacillus cereus 03BB102] gi|225789553|gb|ACO29770.1| putative secreted protein [Bacillus cereus 03BB102] Length = 264 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 99/299 (33%), Gaps = 62/299 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76 +R+ ++NI E + + + + +++ I+ LQE+ S Sbjct: 8 LRIATFNI-W--NHESLWFER---------LEAICEEIRSISPHILALQEVRSSVNLNSK 55 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 N + + + ++ + +A K + +++ ++S Sbjct: 56 KNVAQYIAGQIGYPFCI---------FKEYPDSPDEGLAFLSKIPIIAEEAIWETDIEES 106 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 A+ + G K V ++HL S + +Q + +WI Sbjct: 107 NYC-----AIRITFTYKGCKFGVTNVHL------------NWKSSRIRQEQMNTVNNWIE 149 Query: 197 QKKESLVPFVIAGDFN-------RKINYLGNNDDF----WKTIDPNDSLIRFPKEKDSRC 245 + ++ GDFN + YL +K I+ N + Sbjct: 150 NRASDYE--LLCGDFNDDPFSMVHQ--YLIRKHWIDVAQFKEIEENMIAQ-PTLDYRKNP 204 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N +++ + D+ ++ +N F + ++ E + S G SDH + +D F Sbjct: 205 NLKDDVKQEKRYDWIMIQENT-AFEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKF 262 >gi|206975161|ref|ZP_03236075.1| putative secreted protein [Bacillus cereus H3081.97] gi|206746582|gb|EDZ57975.1| putative secreted protein [Bacillus cereus H3081.97] Length = 264 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 96/301 (31%), Gaps = 66/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NI + + L + + + + + I+ LQE+ S + Sbjct: 8 LRIATFNI-W--NHDSLWLER---------LEAICEEIRTISPHILALQEVRSCVNLN-- 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK--------- 134 S + + + + K+ + L Sbjct: 54 ----------SKKNVAQYIAGQIGYP----FGIFKEYPDSPDEGLAFLSKIPIIAEEAIW 99 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 ++ N A+ + G K V ++HL S + +Q + +W Sbjct: 100 ETDIEESNYCAIRITFTYKGCKFGVTNVHL------------NWKSSRIRQEQMNTVNNW 147 Query: 195 ITQKKESLVPFVIAGDFN-------RKINYLGNNDDF----WKTIDPNDSLIRFPKEKDS 243 I + ++ GDFN + YL +K I+ N + Sbjct: 148 IENRASDYE--LLCGDFNDDPFSMVHQ--YLIRKHWIDVAQFKEIEENMIAQ-PTLDYRK 202 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 N +++ + D+ ++ +NA F + ++ + + S G SDH + +D Sbjct: 203 NPNLKDDVKQEKRYDWIMIQENA-AFEFPTIENVSIFGDSALNSTGMFPSDHYGVFVDLK 261 Query: 304 F 304 F Sbjct: 262 F 262 >gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7] Length = 250 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DADI +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADIFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S L+ + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|262067673|ref|ZP_06027285.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693] gi|291378397|gb|EFE85915.1| DNAse I protein DHP2 [Fusobacterium periodonticum ATCC 33693] Length = 286 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 95/307 (30%), Gaps = 55/307 (17%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L+ F + T S A++ + S+NI L + ++ L Q Sbjct: 15 VASILMIFTMFSTMSSAEEAYIASFNI----------LRLGAAEKDMVQTAKLLQGF--- 61 Query: 65 DADIVFLQEMGSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D+V L E+ + + + NTW S + + ++ + +K Sbjct: 62 --DLVGLVEVINKEGIEDLVDELNRQSPNTWDYHISPFGVGSSKYKE-----YFGYVYKK 114 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V+ ++ G + R +I+ ++ +H N Sbjct: 115 DKVKFVKSE----GFYKDGKSSLLREPYGATFKIDNFDFTLVLVH------TIYGNNESQ 164 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID----PNDS 233 + D+ K +IAGDFN + L + +K D D Sbjct: 165 RKAENFK--MVEVYDYFQDKDRKENDILIAGDFN--LYALDESFRPMYKHKDKITYAIDP 220 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 I+ R N D F Q S + ++E D + K +S Sbjct: 221 AIKTTIGTKGRAN---------SYDNFFFSQKYTTEFTGSSG-ALDFSEKDPQLMRKIIS 270 Query: 294 DHCPISI 300 DH P+ I Sbjct: 271 DHIPVFI 277 >gi|330812030|ref|YP_004356492.1| endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380138|gb|AEA71488.1| putative endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 269 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 79/261 (30%), Gaps = 54/261 (20%) Query: 57 LRQYAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYST--------ERLINHSK 103 LR+ +++ AD+VFLQE+ + + + + + Sbjct: 50 LREAVRSVSADVVFLQEVHGTHEHHPQRYSNWPSMPQYEFLADSLWPQFAYGRNAVYPAG 109 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 N + +R N+ V + G S R + +G ++ + +H Sbjct: 110 DHGNALLSKFQIIRHDNLDVSISGHENRGMLHSVLR----------LPGDGPQVHAICVH 159 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L C LS+ P ++AGDFN D Sbjct: 160 L--GLREGHRVEQLKLLCQRLSELPP------------DAPVIVAGDFN---------DW 196 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 K + + + ++ ++PI +D+ + L + Sbjct: 197 RGKASELLEPCGLREVFAEQWGKPARSFPARLPI--LRLDRIYVRNLKAHHPKVLN---- 250 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 LSDH P+S++ + Sbjct: 251 --VRPWSHLSDHAPLSVEIEL 269 >gi|325263881|ref|ZP_08130614.1| endonuclease/exonuclease/phosphatase family protein [Clostridium sp. D5] gi|324030919|gb|EGB92201.1| endonuclease/exonuclease/phosphatase family protein [Clostridium sp. D5] Length = 351 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 32/208 (15%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW------- 89 G + S + ++ + K+ DADI FLQE+ + + + + Sbjct: 77 DGGSKVQPESKELIENNLNGITSILKDQDADIYFLQEVDRDSKRSYHIDEQEYYEQELGL 136 Query: 90 --------CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + Y L K S T ++V K + L +S+ + R Sbjct: 137 PGMFACNFKVDYVPYPLPPIGKVTSGLVTMTGLSVSKASRIALPESFSWPIKTCNLKRCM 196 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + ++ + K++ +++ HL++ DS E + Q++ L + + + E Sbjct: 197 LE--TRIPIKDSDKELVLINFHLEA---YDSGEGKIA--------QSKLLAEKLASEYEK 243 Query: 202 LVPFVIAGDFNRKI----NYLGNNDDFW 225 + GDFN+ Y ++ D W Sbjct: 244 GNYVIAGGDFNQTFEGLETYPVHDKDSW 271 >gi|296137256|ref|YP_003644498.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12] gi|295797378|gb|ADG32168.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12] Length = 278 Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 91/291 (31%), Gaps = 50/291 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 ++R+ S+NI+ L KR + L+ + L D+VFLQE+ Sbjct: 2 ELRVASYNIH------KGVLGHGPAKR--ASILELQTALQGLQPDLVFLQEVQFLHQRNA 53 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-----KNVRVLQQSYPLLGAKD 135 ++ L H +H A ++ L YP++ Sbjct: 54 RRLSGWP---------ALPQHDFLAQALSMHAAYRTNACTRHGEHGNALLSRYPIIDIAH 104 Query: 136 ---SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R R + + V G + + +H F S + +Q L Sbjct: 105 CDVSDHRFEQRGLLHVQVALPKGGPLHCIVVHF--GLFAASRQ-----------RQTDRL 151 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D+I + + ++AGDFN +G + + K S + Sbjct: 152 LDYIAARVPAQAALIVAGDFNDWHGRIGPQ-LLQQGLVDVSEPPLKTNGKTSWRKRVRTY 210 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++P + + S SEI RLSDH P+ Sbjct: 211 PARLP-----LMPLDRIYARAFSASEIGLG---WGRAWARLSDHAPLLASL 253 >gi|307111052|gb|EFN59287.1| hypothetical protein CHLNCDRAFT_137627 [Chlorella variabilis] Length = 390 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 40/291 (13%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--TLLRQYAKNLDADIVFLQE 73 S ++ LVS+NI G + DY L+ + AD++ LQE Sbjct: 47 PLPSKPGELSLVSYNILCERYATGRRFPYVFAQYLDPDYRWARLQAELEAFGADLIALQE 106 Query: 74 MGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---QSYP 129 + + K F + ++ + +D A+ R+ +R+ +S Sbjct: 107 VTVDRWMELKAFMAS-----LGYTAVVQARAAATGSDFMLALFYRQGKLRLAWSKERSRV 161 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 LL A + G+ +W+ ++HL + + S L Q Sbjct: 162 LLAALEVVEPG----------PAEGQVVWLANVHL------EGSPYRPNDRISQLKHALQ 205 Query: 190 WLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 L+ I K +I GDFN L + W R + C Sbjct: 206 RLEGHIGSKDAAEAADVIICGDFN----SLDQDSPCWLLRRG-----RLERNHTDACCP- 255 Query: 249 KNLRNKIPIDYFVMDQNAYKFL-IQESFSEILYNEDDIKSRGKRLSDHCPI 298 + K I + AY+ ++ F+ + + + S H P+ Sbjct: 256 QVPTTKETIAHPFALHEAYESSGYRQPFTHKVAQDHAVLDFIW-CSRHMPV 305 >gi|257453584|ref|ZP_05618874.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] gi|257449042|gb|EEV23995.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] Length = 262 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 89/270 (32%), Gaps = 61/270 (22%) Query: 54 YTLLRQYAKNLD---ADIVFLQEMGSYNAVAKVFPKNTW------CIFYSTERLINHSKR 104 + + A LD +DI+ LQE+ N + +V N + F +L N + Sbjct: 32 FVKMEGIAAALDQVQSDIICLQEVQGQN-LKRVVKYNEFPDQSQHEWFGEYLQLENSYGK 90 Query: 105 DSNNDI-HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLD 161 + + H AV ++ P + SR R + ++ G I VL Sbjct: 91 NVEYNHGHHGNAVLSRHPL-----DPKHNVNITVSRLEQRGVLHCEIQPIGWHTPIIVLC 145 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + +EN +Q + + +I + + P ++AGDFN Sbjct: 146 AHL------NLMENDR-------EKQYEVMSQYINNEIDQSTPLILAGDFND-------- 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 WK + + C+ N L+ + + + L S I Sbjct: 185 ---WKKLSC----------QKLGCDLN--LQEAVLTHHGKLLPTFPAKLPVLSLDRIYVR 229 Query: 282 EDDIKS-------RGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 230 NLQVHRAWVHKGQPWSNLSDHLPVSAEVSL 259 >gi|261341374|ref|ZP_05969232.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter cancerogenus ATCC 35316] gi|288316685|gb|EFC55623.1| endonuclease/exonuclease/phosphatase family protein [Enterobacter cancerogenus ATCC 35316] Length = 253 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 47/258 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P F + +++ + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPMHVENWPDTPHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK--KIWVLDIHLKS 166 H AV R + + + R + + I V +HL Sbjct: 93 HHGNAVLSRFPIEHYENRDVSV-------GESEKRGLLYCRIAPPDLTFPIHVGCVHL-- 143 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 L + + Q Q L +W P V+AGDFN D + Sbjct: 144 -----GLREAHRQA------QLQMLAEWTNAL-PEGEPVVVAGDFN---------DWR-Q 181 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + +E +R + + +D+ K S + + Sbjct: 182 RANHPLKAEAGLEEIFTRAHGRPARTFPVRFPLLRLDRIYVKNAHASSPTAL------AL 235 Query: 287 SRGKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 236 LNWRHLSDHAPLSAEIHL 253 >gi|224066090|ref|XP_002193790.1| PREDICTED: deoxyribonuclease I-like 3 [Taeniopygia guttata] Length = 491 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 F+ GDFN +Y+ + + +K+ N + P D V+ Sbjct: 341 ENFIFMGDFNAGCSYVPKKQWKNIRLRTYSEFLWLIGDKNDTTVKNTT---RCPYDRIVV 397 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 Q + ++ S + + E+ + + L SDH P+ + Sbjct: 398 RGQKLIQAVVPHSVNIFDFQEEFQMTEEQALGVSDHFPVEFEL 440 >gi|270159292|ref|ZP_06187948.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|289165884|ref|YP_003456022.1| exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] gi|269987631|gb|EEZ93886.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|288859057|emb|CBJ12986.1| putative exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] Length = 259 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 97/310 (31%), Gaps = 84/310 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMG--SYN 78 ++L SWN+N+L L Q LD+ DI+ +QE N Sbjct: 2 IKLASWNVNSLK-------------------VRLEQVISWLDSSHVDILAIQETKLIDDN 42 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSF 137 VF + + + +S ++ + +A+ + P L Sbjct: 43 FPRAVFEEKGYHVVFSGQKT------------YNGVAIISRYPFSDVLTDIPDLDDPQ-- 88 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 RR + + V ++++++ + L S + Y Q + ++I Q Sbjct: 89 -----RRILIVTV----AGFRLINLYVPNGSELTSDKYQYKLD----WLQK--VTNFIQQ 133 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIR-----------------FPK 239 + + GDFN +D W+ R F + Sbjct: 134 QINIYSKIAVVGDFNIAPEDRDVHDPIAWEGSVLVSPAERNAFVQLLQLGFHDSFRNFVQ 193 Query: 240 EKDSRCN----ANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 E S A RN+ ID+ ++ + Q D + +R SD Sbjct: 194 EDQSFSWWDYRAAAFRRNRGLRIDHILLSKELNHLCTQSVI-------DKEPRKVERPSD 246 Query: 295 HCPISIDYDF 304 H P+ + + Sbjct: 247 HAPVWVALEL 256 >gi|224543695|ref|ZP_03684234.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM 15897] gi|224523348|gb|EEF92453.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM 15897] Length = 248 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 96/304 (31%), Gaps = 80/304 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N + ++ K+LDADI LQE Sbjct: 1 MKYVSWNVNGIRACLKKGFLES---------------FKSLDADIFALQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++T A++K G Sbjct: 36 ----------TKAQKDQIDLDIPGYTLYTNDAIKKGYS----------GTAILTRMKPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E ++ V+ + + + F+ + + + +W ++ Sbjct: 76 VSYGIGIEEYDQEGRVITLEFEDYYFVPCYTPNSKKELARIDYRMEWEDAFLAYLDALNK 135 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDP----NDSLIRFPKEKDSR 244 P ++ GD N + + + +P +KD+ Sbjct: 136 PVILCGDLNVAHHEIDLKNPSSNHHNAGFSDQERSKMTELLSHGYIDTFRYLYPDKKDAY 195 Query: 245 CNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + +++ IDYF++ ++ + + + ++Y+ DI SDHCPI Sbjct: 196 TWWSYMFKSRERNAGWRIDYFIVSESLKERIKES----LIYS--DILG-----SDHCPIG 244 Query: 300 IDYD 303 ++ + Sbjct: 245 LEME 248 >gi|124025252|ref|YP_001014368.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] gi|123960320|gb|ABM75103.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] Length = 275 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 102/312 (32%), Gaps = 83/312 (26%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV-- 83 + +WN+N++ + ++++ DI+ LQE + + + Sbjct: 3 VATWNVNSIRSR----------------IDHVKEWLITNKIDILCLQETKTEDKFFPIEN 46 Query: 84 FPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F + + S ++ N R N+I + Y L R Sbjct: 47 FSDLGYEVSISGQKSYNGVAIISRFPINNIKIGF-------NEVINDYQDLSILSEQKR- 98 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ + I ++++++ + ++S + Y + + L+ ++ + + Sbjct: 99 --------IISADINDIRIINVYVPNGSSINSDKFIYK------KKWLECLQVYLREINK 144 Query: 201 SLVPFVIAGDFN-----RKINYLGN---------------NDDFWKTIDPNDSLIRFPKE 240 + P + GDFN R I+ D ++ + ++ Sbjct: 145 NNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKERELLKDALGGELEDVFRIFEPGEK 204 Query: 241 KDSR--CNANKNLRNK-IPIDYF-----VMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 S + R+K ID+ ++ ++ +E ++ Sbjct: 205 NWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSCWIDKEQ------------RSREKP 252 Query: 293 SDHCPISIDYDF 304 SDH P+ +D ++ Sbjct: 253 SDHAPVVVDINW 264 >gi|293376599|ref|ZP_06622827.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325839419|ref|ZP_08166858.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|292644825|gb|EFF62907.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325490539|gb|EGC92855.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 262 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 86/265 (32%), Gaps = 38/265 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNND 109 L Q K D++ LQE+ + N KV N + S +L + + Sbjct: 20 IKYLAQVIKEKQYDVIALQEVSQLINPNDENKVKADNYAVVLLSELMKLGITDYQFIWDF 79 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG------NRRAVELLVEINGKKIWVLDIH 163 H V ++ + +L + + ++A RR V + N + + V H Sbjct: 80 SHIGFDVYEEGLAILTRYHIERAHSFVVTQANDVTNYRTRRIVAIDFISNNQPVSVYSCH 139 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-D 222 L F D+ E + Q L + ++ GDFN N G D Sbjct: 140 L--GWFHDTEE--------PFTGQVDELVS----RLNKERLNIVVGDFNNDANLSGEGYD 185 Query: 223 DFWKT--IDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEI 278 +D ++ + + NK ID V+ L + Sbjct: 186 YLLSKGLLDTYHLALKKDEGTTVAGKIDGWEENKKGLRID-LVLSDKPVNVLSSH----V 240 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 ++N S +SDH + ++ + Sbjct: 241 IFN----GSHKDIVSDHFGVEVELN 261 >gi|83309117|ref|YP_419381.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82943958|dbj|BAE48822.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 263 Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 97/311 (31%), Gaps = 78/311 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +RLV+WNIN++ + LLRQ A ++ DI+ LQE + Sbjct: 1 MRLVTWNINSIRLR----------------IDLLRQVASVMNPDIICLQEIKVDDP---- 40 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +FP + + + + +A+ + + G D R Sbjct: 41 -LFPLD------ACREMGFGHVAFHGMKGYNGVAILSRLPIAEARPLSRCGRDD---RRH 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +E NG ++ L ++ + + E + L + + W + Sbjct: 91 LMARLE-----NGVEVHCL--YIPAGGDIPDPETNDKFA-HKLDF-VREITAWAAAEFTP 141 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN------------- 248 ++AGDFN I L + K + S E + A+ Sbjct: 142 DSRAILAGDFN--IAPLEADVWSHKQLLKVVSHTPVEVELLNAFQASVPFVDAMRHFVPP 199 Query: 249 -----KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + P +D+ + S +L + ++ S Sbjct: 200 EEKLFTWWSYRSPDWQKNDRGRRLDHVWVTPALV-----PSLRGMLVARE--ARSWEQPS 252 Query: 294 DHCPISIDYDF 304 DH P+ +D+D Sbjct: 253 DHVPVMVDFDL 263 >gi|87123786|ref|ZP_01079636.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] gi|86168355|gb|EAQ69612.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] Length = 276 Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 94/306 (30%), Gaps = 72/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ SWN+N+L RT D + + D++ LQE + Sbjct: 1 MRIASWNVNSL--------------RTRLD--HVLNWLNAAQPDLLCLQETKVADPQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + F W + +A V + + ++ + A + Sbjct: 45 EAFTSRGWQ------------ATVHGQKAYNGVALVSRTPLEDVRLGFSGELADEEAEEL 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKK 199 G ++ V + ++G ++ L + S L+ +C L+ ++ + + Sbjct: 93 GTQKRV-ISALLDGVRVVNLYVPNGSSLKLEKYPYKLRWLAC---------LQRYLQRPQ 142 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEK--------DSRC 245 E P + GDFN + +D + +L + + Sbjct: 143 ERGEPLCVVGDFNIALESRDMHDPDRLTGGIMASEPERAALKAALGDTLHDVFRVFEPDT 202 Query: 246 NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID+ + L+ + +++ ++ + SDH Sbjct: 203 GHWSWWDYRSGAWDRDRGWRIDHIYLCD----ELLARARGCLIHKQE---RGRDQPSDHA 255 Query: 297 PISIDY 302 P+ D Sbjct: 256 PVVADL 261 >gi|260466724|ref|ZP_05812910.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259029454|gb|EEW30744.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 287 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 82/276 (29%), Gaps = 58/276 (21%) Query: 66 ADIVFLQEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI- 114 AD++ LQE+ + + P + + ++ S S+ + I T Sbjct: 30 ADVIALQEVTRNNPRNGGRDMVAEIGEALP-DYFAVYGSNFEANIGSRIEDGRAITTTFQ 88 Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 V K L ++ L ++ R A+E L+E I IHL ++ Sbjct: 89 LGNMVLSKTPIHLSRNLLLPRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPVE 148 Query: 172 SLENTYSPSCSLLS--QQAQWLKDWITQ----KKESLVPFVIAGDFN------------- 212 LL+ + L + + + FV GDFN Sbjct: 149 RASQIQFLRQRLLNYALEGGALSG-VAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAG 207 Query: 213 ---RKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + D D +D D ++ + +K IDY + Sbjct: 208 RPDHEFGMPLTADFAVDAAVRLDVADLATWVDPKRPEDASRHKR------IDYIFTSAS- 260 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S + + + SDH P+ + Sbjct: 261 ----LARSLKRLWVDRQAVG------SDHLPVWAEL 286 >gi|321468777|gb|EFX79760.1| hypothetical protein DAPPUDRAFT_3216 [Daphnia pulex] Length = 288 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 108/308 (35%), Gaps = 49/308 (15%) Query: 24 VRLVSWNI--NTLSEQEG--VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +RL+ WNI +L E V ++ T Y ++ + + + DI+ LQE+ Y Sbjct: 1 IRLLQWNILSQSLGEHNDNFVRCPLEALDWRTRRYRIVEEIVE-YNPDIICLQEVDHYQF 59 Query: 80 VAKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +++ + I++ + +N AI R + +++ ++ S Sbjct: 60 LSRALRSQGYEGIYFPKPDSPCIYIKGNNGPDGCAIFYRANDYELIKVETRIVEVWRVQS 119 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + L + +G++I V HLK+ L +L N L Sbjct: 120 NQVVILTM-LRHKASGREICVATTHLKARQGALLSTLRNEQGKD---------ILDFLQN 169 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN---------- 246 + P ++AGDFN + + TI + RF + RC+ Sbjct: 170 NVDVADCPIIMAGDFN-----AEPTEPVYSTIRSDS---RFGFDSAYRCDVDGAEEAGQE 221 Query: 247 -ANKNLRNK------IPIDYFVMDQNAY---KFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + IDY + + L + +I D + S SDH Sbjct: 222 PPYTTWKVRGEGESCHTIDYVFFSRRQLGVNQVLPFPTGEQI--GPDRVPSFQY-PSDHF 278 Query: 297 PISIDYDF 304 + +D+D Sbjct: 279 SLVVDFDL 286 >gi|148975587|ref|ZP_01812458.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3] gi|145965015|gb|EDK30266.1| hypothetical protein VSWAT3_03466 [Vibrionales bacterium SWAT-3] Length = 347 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 110/341 (32%), Gaps = 67/341 (19%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNA 79 +V ++N+ N L ++N + + ++ D D++ QE+ S + Sbjct: 6 QVTFSTFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWIAEAIRSTDCDVIGFQEIFSPES 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQ--SYPLLGA 133 + ++ + + F + S ++ ++T I+ R V LL A Sbjct: 66 LQQLMNELGYPYFAVVD-----SAHVEDDYLYTSPVVGISSRYPIESVQPVTPDSSLLAA 120 Query: 134 KDSFSRAG-NRRAVELLVEING-KKIWVLDIHLKSF----------CFLDSLENTYSPSC 181 + NR + +E+ +H KS DS S Sbjct: 121 FNLGDNFSFNRTPIHATIELPHLGSTDCYVVHFKSQRPTEPKVEPIKTSDSSSEQKPQSD 180 Query: 182 SLLSQQAQWLKDWI-----------------TQKKESLVPFVIAGDFNRK---------I 215 +L+ + L W+ Q+ S P V+ GDFN+ + Sbjct: 181 TLIKLHQEQLGSWLSSVQRGLEAKLLHQYITNQRYLSDQPVVLMGDFNKPLFNNEFKGLL 240 Query: 216 NYLGNND-----DFWK-TIDPNDSLIRFPKEKDSRCNANKNLRN---KIPIDYFVMD--- 263 +Y N D + + L E+D +DY +M Sbjct: 241 SYSLNRDETSQHWLSHFRLRDSWDLYHQLHEEDLLEQRKPTHYYGASGSVLDYILMSNEF 300 Query: 264 --QNAYKFLIQESFSEILYNEDDIKSRGKRLS-DHCPISID 301 QN+ + +++ + ++ + + S DH +S+ Sbjct: 301 DCQNSSSLMEISNYTVLDHHLINPSFEHDQFSTDHAVVSVT 341 >gi|293368711|ref|ZP_06615316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636176|gb|EFF54663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 361 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE + + ++ + S + Sbjct: 125 SYLVDSNADIICLQEYNTA-------TNKKYLTEQDIKKALKAYPYQSVHQQGKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 +P+L + +++ ++ +N + +++ HL+S + Sbjct: 173 DVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLINNHLESNKLTKEDRGMYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINY 217 D +++ + L Q + L + + ++ GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPTTIVCGDFN-DGSI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKASDHYPI 354 >gi|149175215|ref|ZP_01853837.1| probable secreted protein [Planctomyces maris DSM 8797] gi|148845824|gb|EDL60165.1| probable secreted protein [Planctomyces maris DSM 8797] Length = 280 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 72/268 (26%), Gaps = 77/268 (28%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + L + + D+V LQE+ + N T Sbjct: 59 DISRLARVIQETKPDLVALQEVD------------------VGVKRSNRVHEAQRLAELT 100 Query: 113 AIAVRKKNVR----------------VLQQSYPLLGAKDSFSR--AGNRRAVELLV-EIN 153 +AVR + +L L +S + R A+ + V N Sbjct: 101 GLAVRFGPTQHYEGGLFGNAVLTRLPILDVMIQPLPYTESTPQLVTYPRGAIIVTVRGQN 160 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 GK + + H F +L ++ +S +P ++AGD N Sbjct: 161 GKPLRFISTH-----FQHNLPADRIEEAKAINGHFTL---------DSDIPTILAGDMNA 206 Query: 214 KINYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 W + + P K + IDY A Sbjct: 207 TPEAEPIQILQKQWTNAIDDKATPSAPATKP-----------RSRIDYIFYRPAAD---- 251 Query: 272 QESFSEILYNEDDIKSRGKRL-SDHCPI 298 + + K + L SDH PI Sbjct: 252 --------FEVIETKVIDESLASDHRPI 271 >gi|313204713|ref|YP_004043370.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444029|gb|ADQ80385.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 289 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 100/321 (31%), Gaps = 57/321 (17%) Query: 1 MIRKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M ++ VL LV + A K+ + ++NI + + + ++ V R +D + Sbjct: 1 MTKRNVLILVVAMCWSHLFAGDNAGKLTIATYNIRLQTPVDSGA--RSWVNR-KAD---V 54 Query: 58 RQYAKNLDADIVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-- 113 + K D DI +QE+G + A K + + + T Sbjct: 55 ARVIKKYDFDIFGVQEVGNKNQEADLKALIPDYTYFGKGRDNQVGTDGEQIGLFYKTKRF 114 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC--FLD 171 +A K + + + + D+ R R V + + K FC F Sbjct: 115 LAKEKGSFFLSETPEVMSKGWDAAYR---RMCVWIRFQDAETKSEFFV-----FCSHFDH 166 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 S L+ QQ + K + P + GD N D +K + Sbjct: 167 MGVKARVESARLIEQQVK--------KIAAGKPVLFLGDLN---TAPDETD-MYKILHAT 214 Query: 232 DSLIRFPKEKDSRCNANKNLRN---------KIPIDYFVMDQNA--YKFLIQESFSEILY 280 R K + + IDY + +I + FSE Y Sbjct: 215 FDDSREISAKPAIGSVGTFNNYDVSKMMLPVSERIDYIFCKKIKVFSYRVISDRFSEKTY 274 Query: 281 NEDDIKSRGKRLSDHCPISID 301 SDH P+ I+ Sbjct: 275 P-----------SDHFPVMIE 284 >gi|270295395|ref|ZP_06201596.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274642|gb|EFA20503.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 283 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 100/328 (30%), Gaps = 73/328 (22%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 + ++A V + C KV ++S+NI N R + ++ Y Sbjct: 5 LFNSVLVAFVLLVASCGKQPEAKVEVMSFNI---RLDHVADSMNNWKYRKDNAAQMIAYY 61 Query: 61 AKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 A DIV +QE+ N + + P + + T + Sbjct: 62 A----PDIVGMQEVVKNQLNDLKERLP--QYTALGVGRADGKEKGEYCSLFYKT-----E 110 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV-------EINGKKIWVLDIHLKSFCFLD 171 + + + L DS + G A E +V +++G+K+ + H F Sbjct: 111 RFELLKNGDFGLSETPDSIGKKGWDAACERIVTWAVLKDKVSGRKVAAFNTH-----FDH 165 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 E S L+ ++ + + +P +I GDFN T+D Sbjct: 166 VGEVARRESAKLILEKIKQI--------AGELPVIITGDFN-------------GTVDSE 204 Query: 232 DSLIRFPKEKDSRCNANKNLR---------------NKIPIDYFVMDQNAYKFLIQESFS 276 I + C+ K + + ID+ ++ S Sbjct: 205 PVTILTEGGMRNACSTAKVVYGPTWSFHDFGRIPVEKRRLIDFIFVNA---------SVE 255 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y K LSDH P+ + Sbjct: 256 VERYRTVGDKPDNGYLSDHAPVLVTLKL 283 >gi|229108038|ref|ZP_04237664.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228675438|gb|EEL30656.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 263 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSATIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLKGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|134291232|ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134134421|gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 263 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 47/206 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P A +R+ ++NI G W + + LDAD++ LQ Sbjct: 18 AAPAGAPRGHDLRIATYNI-----HGGYGAWP------ARAVERIVAVIRELDADVIALQ 66 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQS 127 E+ ++ H + + + R N + + Sbjct: 67 EVP--------LGGTR------APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCP 112 Query: 128 YPLLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D F + R A++ ++ + I V+ HL L + Sbjct: 113 IRAARTLDLSFHQREPRGALDADIDCSAGPIRVVATHL-------GLSANERSA------ 159 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN 212 Q Q L +P ++ GD N Sbjct: 160 QVQRLLAAFDT---GAMPVILMGDIN 182 >gi|111221323|ref|YP_712117.1| putative exodeoxyribonuclease III [Frankia alni ACN14a] gi|111148855|emb|CAJ60533.1| Putative exodeoxyribonuclease III [Frankia alni ACN14a] Length = 298 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 93/299 (31%), Gaps = 59/299 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WNIN ++ R L ++ D+V LQE S +A + Sbjct: 1 MRIATWNIN------------SAKARQ----ARLIEWLDRAGPDVVCLQETKLSDDAFLE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +F ++ + + + +A+ + L F Sbjct: 45 LFDEDLFR--------RGYRVAHHGDGRWNGVAILSRGSLDDVVRG--LPGGPGFPDPEP 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +G ++W L + + +D Y S L+D + + Sbjct: 95 R---AIAATCDGVRVWSLYV--PNGRTVDDPHYAYKLS------WLAALRDVVAAEVTRG 143 Query: 203 VPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 P + GDFN I + ++ R + LR + P D Sbjct: 144 -PLMTLGDFN--IAPTDADVWDVAQFEGATHVTPAERAALGELVDAGLVDVLRTRWPDDV 200 Query: 260 FVMDQNAYKFLIQESFS---EILYNEDDIKSRGKRL------------SDHCPISIDYD 303 + + ++F ++ D+ R + + SDH P+ +D D Sbjct: 201 VYTYWDYRQLCFPKNFGMRIDLTLASADVADRVRAVWVDRAARKGTGTSDHAPVIVDLD 259 >gi|312796736|ref|YP_004029658.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454] gi|312168511|emb|CBW75514.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica HKI 454] Length = 259 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 92/308 (29%), Gaps = 78/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN+L + + D+ + + D++ LQE+ Sbjct: 1 MKIATWNINSLKVRLQHVI----------DWLAMSRV------DVLCLQELK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKR---DSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFS 138 P + + + + S + +A VR + D Sbjct: 37 LPDDKY-----PRAALEAAGYRSWFSGQKTYNGVAILVRDGLPVDEAVVIRNIPGFDDLQ 91 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + + I+G + V+ + + + + Y S L++W+ + Sbjct: 92 QRL------IAATIDG--VRVVSAYFPNGQAPGTDKFAYKLS------WLAALREWVAAE 137 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDF-W--------KTIDPNDSLIRFPKEKDSRC--NA 247 + F + GD+N +D W + D SL+ RC Sbjct: 138 MRAHPQFALTGDYNIAPEDRDVHDPQAWEGQNLVSPEERDAFRSLVELGLVDAFRCFEQP 197 Query: 248 NKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +K+ ID+ ++ + + D R + SDH Sbjct: 198 DKSFSWWDYRMLAFRRNAGLRIDHILLSPSLAQCCSACEI-------DKTPRRWDQPSDH 250 Query: 296 CPISIDYD 303 P+ + Sbjct: 251 APVIATLE 258 >gi|213403402|ref|XP_002172473.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] gi|212000520|gb|EEB06180.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] Length = 427 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 19/154 (12%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVR 122 D DIV LQE+ S + I ST + +S+ + + +AV R V Sbjct: 41 DYDIVLLQEVWSI--------NDYHSIQNSTRENLPYSRFYHSAAMGAGLAVLSRYPIVE 92 Query: 123 VLQQSYPLLGAKDSFSRA----GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 YPL G +F R G A L +GK I V D HL + + + Sbjct: 93 TTMNKYPLNGRPQAFWRGDWYVGKGVATASLQHPSGKIISVFDTHLHA----PYGKGEDT 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 C ++ QA ++ I + + AGDFN Sbjct: 149 YLCHRMA-QAWYISKLIRAAVQRGHIVLAAGDFN 181 >gi|115375620|ref|ZP_01462877.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|115367396|gb|EAU66374.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 263 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 95/301 (31%), Gaps = 72/301 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + +++ SWN+N + R L+ + D++ LQE+ +A Sbjct: 5 RAMKIASWNVN------------SVRARQERLLNWLKAH----QPDVLCLQELKCVDA-- 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 R + + +A+ + + S +LG D + Sbjct: 47 --------DFPTEAVREAGYHAVTHGQKTYNGVAI----LSKAEPSDVVLGLSDGVEDSH 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R L+ + V+ ++ + +DS Y + L+ ++ + Sbjct: 95 AR-----LIAATVSGVRVVSAYVPNGQAVDSPAYVYK------LEWYSRLRRYLEARHTP 143 Query: 202 LVPFVIAGDFNRKINYLGNNDD-FWK-----TIDPNDSLIRF----PKEKDSRCNANKNL 251 P V+ GD+N + D W+ T+ D+L + + + + Sbjct: 144 DQPLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEK 203 Query: 252 RNKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + L++ D + +GK+ SDH P Sbjct: 204 KFSWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAP 256 Query: 298 I 298 + Sbjct: 257 V 257 >gi|229592767|ref|YP_002874886.1| hypothetical protein PFLU5388 [Pseudomonas fluorescens SBW25] gi|229364633|emb|CAY52546.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 362 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 61/236 (25%) Query: 15 PCTASVAQKVRLVSWNINTL----------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 T Q +++++WN+ L + + +V+ + + + ++ Sbjct: 45 APTLLPGQALKVMTWNVQYLAGKNYVFWYDTADGSGPDDRPTVEDMAASLDEVARVIRDE 104 Query: 65 DADIVFLQEMG---------SYNAV--AKVFPK---------------NTWCIFYSTERL 98 DI+ LQE+ A+ ++ W IF S R Sbjct: 105 QPDILLLQELDENAKPSHYQDQLALLQERLVDLYPCSVQAFDWKADFVPDWHIFGSVGRK 164 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 + R + P A + + A+ L +G + Sbjct: 165 LATLSRYQ-------------IEHAERLQLPAPEANIISRQFQPKPALLLTYLPLSDGGQ 211 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + VL+ L + SP S + +Q + + + + P++I GDFN Sbjct: 212 LAVLNTRL----------DGDSPGRSAVQEQVKTTVKLLDKFEGRGTPWLIGGDFN 257 >gi|325954373|ref|YP_004238033.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323436991|gb|ADX67455.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 320 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 76/268 (28%), Gaps = 47/268 (17%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 +E + ++ SD L Q+ AD+V LQE+ W Sbjct: 97 TESPNYKVASVNIYSQNSDVYTLMQFINKEKADLVLLQEV-----------TTKWQNNLD 145 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 R + + D + IA L YP+ ++ + + Sbjct: 146 NLRTLYPYYHEEVRDNNFGIA--------LYSRYPIDSLVVKNYIDDRHPSLWATISVGE 197 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 KKI VL H + L N L Q + +K ++ ++ GD N Sbjct: 198 KKIQVLGTH-----PVPPLPNQARFEKRNL--QLELMKK--DIEESDHENILLVGDLNCT 248 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + N D ++S + ID+ + +N Sbjct: 249 LFSPNINK---IKNDKLKDARLGFGFQNS--WNAFVPIFRTNIDHIWVSKNIK------- 296 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D SDH PI + Sbjct: 297 --VTNFYRGDFIE-----SDHFPIIAEL 317 >gi|302556290|ref|ZP_07308632.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302473908|gb|EFL37001.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 293 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 74/268 (27%), Gaps = 57/268 (21%) Query: 8 ALVFFLVPCTASVAQKV---RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 A F A+ V R+++WN+ + V R + YA Sbjct: 42 AGSLFAGSPPLRAARDVVPNRVMTWNLCN-------PCAVSDVDRA----AEIATYA--- 87 Query: 65 DADIVFLQE--MGSYNAVA---KVFPKNTWCIFYST-----ERLINHSKRDSNNDIHTAI 114 ++ QE + + + + + Y T R Sbjct: 88 -PQVIGFQEACVRDVERIRDYLRNLHGLVYHVEYGTVLRNWGRCGGLPWNPGGFGQAVLS 146 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A + YP G++D R + + + G+ + V + HL Sbjct: 147 A--APMTEPVNVEYPDGGSED-------RGYMAVTTTVGGRPVRVFNTHL---------A 188 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + QA L + + + ++ GDFN + W + + Sbjct: 189 QRRQEAVR--ADQAGVLAGEVARHDRA----IVLGDFN-AVPDAPELRPIWA-LATDTDP 240 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVM 262 P C + + DY + Sbjct: 241 QCHPSPT-GTCQPTTDWQ--SKFDYVFL 265 >gi|262198893|ref|YP_003270102.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262082240|gb|ACY18209.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 300 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 99/304 (32%), Gaps = 82/304 (26%) Query: 13 LVPC--TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 L PC A V ++VR+ +WN V++ S L + + +DAD+V Sbjct: 52 LAPCDAGAPVPERVRVATWN---------VAIAGFSS------IDTLARELREIDADVVL 96 Query: 71 LQE----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 LQE + A+A+ + + I + V + Sbjct: 97 LQELEVGARRSGRVNQPRALAEAMGMDY----------AFAPSVPYDGGIF-GLTVLTRL 145 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + L + + R A E+ ++ ++D+H + + T + + Sbjct: 146 PLARAERH-SLDGEIVYEP---RIAFEVGACAGALELRLIDVH------AEYVPETNTDN 195 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + L++ + D P +AGD N + G + + F +E Sbjct: 196 LARLAELIGPVGD---------QPIAVAGDLNTRPANAG----IVALLADTGLVDLFHEE 242 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 I IDY + +++ES SDH P+ + Sbjct: 243 GGEPA---------IYIDYVLASPP-LAEIVRESVRV-----------DSDASDHAPLWV 281 Query: 301 DYDF 304 ++D Sbjct: 282 EFDL 285 >gi|196034583|ref|ZP_03101991.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228944177|ref|ZP_04106556.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992626|gb|EDX56586.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228815566|gb|EEM61808.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 263 Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 39/258 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + I+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKVV 242 Query: 278 ILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 243 FNGTNRKV------ISDH 254 >gi|322390094|ref|ZP_08063629.1| RgfB protein [Streptococcus parasanguinis ATCC 903] gi|321143221|gb|EFX38664.1| RgfB protein [Streptococcus parasanguinis ATCC 903] Length = 270 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 48/206 (23%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC 90 + L+ + +N+ ++ + L++ D++ QE+ A V + Sbjct: 1 MKFLTLNSHSWMEENAQQK----FETLKEQILEAQYDVICFQEVNQEMASEVVKTDEYYQ 56 Query: 91 IFYSTERLIN----------------------HSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 S + + ++ +AV + L+ Sbjct: 57 ALPSAVAIHKDHFVRVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQP--LKADE 114 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L+ D + RR ++GK+I V +HL + D Q Sbjct: 115 ILVSNMDDPTDYHTRRVAVAHTSVDGKEIAVASVHLS---WWDKG------------FQF 159 Query: 189 QW--LKDWITQKKESLVPFVIAGDFN 212 +W ++ + +Q PF++AGDFN Sbjct: 160 EWPRIEKYFSQV---GKPFILAGDFN 182 >gi|124267258|ref|YP_001021262.1| exodeoxyribonuclease III [Methylibium petroleiphilum PM1] gi|124260033|gb|ABM95027.1| Exodeoxyribonuclease III [Methylibium petroleiphilum PM1] Length = 256 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 89/316 (28%), Gaps = 98/316 (31%) Query: 24 VRLVSWN-----------INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +RL +WN ++ L+ +L K T + Sbjct: 1 MRLATWNVNSLAVRLPQVLDWLTANPVDALVLQETKLTDDKFPRA--------------- 45 Query: 73 EMGSYNAVAKVFPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ + + F + T+ S E D +I A +Q+ + Sbjct: 46 EIEAAGYAVQWFGQKTYNGVALLSREPA-----HDVTKNIF-GFA--------DEQARVI 91 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 G D G NG+ DS + TY + Q Sbjct: 92 AGTVDGVRVIGAYF-------PNGQA-------------PDSEKFTYKMA----WLQ--A 125 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWK-----------------TIDPND 232 L+DW+ + + V+ GDFN +D W + D Sbjct: 126 LRDWVRSELAAHPRLVLMGDFNIAPEDRDVHDPVLWAGQIHCTPQEREHFRELIALGLVD 185 Query: 233 SLIRFPKEKDSRCN---ANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + F + S N R ID+ ++ + + D + Sbjct: 186 AFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEALRPAVSACMI-------DKLPR 238 Query: 288 RGKRLSDHCPISIDYD 303 + +R SDH P+ ++ Sbjct: 239 KNERPSDHAPVVVELS 254 >gi|293602414|ref|ZP_06684860.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] gi|292819176|gb|EFF78211.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] Length = 292 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 89/279 (31%), Gaps = 71/279 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN--NDIHTAI 114 L+ + + ADI+ LQE+ +A + ++ + ++ + Sbjct: 50 LQPWMEKHAADILCLQEIKIADA----------DLTEDLRHPPGYTGHFHHAVKKGYSGV 99 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + ++ LG ++ ++ + K + V+ +L S D + Sbjct: 100 GIYLRDAAERV--NIGLGCEEFDPEGR-------IIRADWKNLSVISAYLPSGSSGDERQ 150 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----------- 223 L + W+ + + K + FVI GD+N + + Sbjct: 151 QAKY---RFLDRFGPWIDALMHEHKTTGREFVICGDWNIAHKEIDLKNWKGNMKNSGFLP 207 Query: 224 -----------------FWKTID--PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++TID P+ + + N IDY + Sbjct: 208 EERAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVG------WRIDYQIATP 261 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + +Y ++ R SDH P++IDYD Sbjct: 262 G----IAARARNVAIYKDE-------RFSDHAPLTIDYD 289 >gi|330875089|gb|EGH09238.1| exonuclease III [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 82/316 (25%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + + + + H +A L P L F Sbjct: 38 ---SDEQFPLADVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHF 141 Query: 200 ESLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPND 232 + P ++ GD N R + + W +D Sbjct: 142 SNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFR 201 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 L ++ S + + + ID + + D Sbjct: 202 YLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLR 254 Query: 288 RGKRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 255 GMEKPSDHAPIWLELS 270 >gi|289207194|ref|YP_003459260.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] gi|288942825|gb|ADC70524.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] Length = 255 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 95/305 (31%), Gaps = 76/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +++ SWN+N+L + L RT DI+ LQE N Sbjct: 1 MKIASWNVNSLKVRLPQVLDWLGSSRT----------------DILALQETKLTDENFPV 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + YS ++ + +A+ + + P G +D+ Sbjct: 45 SAIHEAGYEVVYSGQKT------------YNGVAILSRTQATDVVTDPP-GLEDAQ---- 87 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 RR + + I V+++++ + + + + Y ++ W+ + E+ Sbjct: 88 -RRILAATIGD----IRVVNLYVVNGENVGTEKYAYKLD------WLARMRSWLAAEIEA 136 Query: 202 LVPFVIAGDFNRKINYLGNNDD-FWKT-----IDPNDSLIRFPKEKDSRC---------- 245 V+ GDFN +D W ++L + + Sbjct: 137 HPKLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREALAALTELGLADTFRAFEQPEEE 196 Query: 246 ------NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A RN+ ID + K L D +R SDH P+ Sbjct: 197 FSWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGI-------DREPRGWERPSDHAPV 249 Query: 299 SIDYD 303 ++ Sbjct: 250 WAEFS 254 >gi|167840494|ref|ZP_02467178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis MSMB43] Length = 624 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 99/325 (30%), Gaps = 67/325 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + + R Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGNGFDDPNNRGAKSYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ + W + D + A+ + ++ Sbjct: 354 NDGYGPLSAVRQLAAKLGDNWRVV------------DPGSARLGGDAIAVALIYDSRKVK 401 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C- 181 P+ A NR+ + + + V HLKS C + ++ C Sbjct: 402 PVGNAATLAIDDRNRQPLAQTFRPIGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCW 461 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A + DW+ + ++ GD N D + ++ + Sbjct: 462 NATRSRAAAKVADWLARNPTGAHSEGVLLIGDLNSH----TYEDPV-RALESRGYVNLVS 516 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSE 277 + + + +D+ + Y + + + Sbjct: 517 SKIGAGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQ 576 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 577 RTYYAPD----AYRSSDHDPVLIDI 597 >gi|84497619|ref|ZP_00996441.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] gi|84382507|gb|EAP98389.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] Length = 262 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 87/304 (28%), Gaps = 72/304 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+N++ + + + + D D++ +QE + Sbjct: 2 VRIATWNVNSIRSR----------------IDRVEAWLERTDVDVLAIQETKCRE---EQ 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 FP + + + ++ +A+ + + +P + + Sbjct: 43 FPFDRFE-------ALGYAVAHHGLSQWNGVAIASRVGLDDVSRGFPDVP---HWGEPAV 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 A + NG ++W L + D + L Q W Sbjct: 93 AEARAIGATCNGIRLWSLYVP-NGRALEDPHMHYKLAWLEQLRVQTAA---W----AAEG 144 Query: 203 VPFVIAGDFNRKINYLGNNDDFW-------KTIDPNDSLIRFPKEKDSRCNANKN----- 250 PF + GD+N I + P + + + + Sbjct: 145 QPFALMGDWN--IAPQDEDVWSMDYYLDKSHVSPPERAAFQAVLDAGVSDVVRPHTPEPG 202 Query: 251 -------------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 R + ID+ + + + + ++ K +G SDH P Sbjct: 203 TFTYWDYQRLAFQKRRGMRIDFILASDP-----LAQRVRGAAIDREERKGKGA--SDHAP 255 Query: 298 ISID 301 + I+ Sbjct: 256 VVIE 259 >gi|237800675|ref|ZP_04589136.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023534|gb|EGI03591.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 43/193 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + ++ + + H +A L P L F Sbjct: 38 ---SDEQFPHADIEALGYHVHFHGQKGHYGVA--------LLSRNPPLDLHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQSLLESHF 141 Query: 200 ESLVPFVIAGDFN 212 + P ++ GD N Sbjct: 142 SNEQPLIVMGDVN 154 >gi|225018561|ref|ZP_03707753.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] gi|224948663|gb|EEG29872.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 88/290 (30%), Gaps = 48/290 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 Q ++++S+N L + R + DADI+ +QEM Sbjct: 34 QTIQIMSFN---LRRDPFYTKRFGWGNRRDGVIE----IIRQSDADIIGVQEMTPEMKKD 86 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKD 135 + + IF + ++ I VR + V VL P Sbjct: 87 LETKLDEFSIFGTGRS-------RKLLGEYSGILVRNETVEVLSNHTFWLSKNPDKQGSH 139 Query: 136 SFSRAGNRR--AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + R +E+ ++ + +++ V + H F S + + + Sbjct: 140 ALLAPFPRICTTIEVYLKRSKQRMRVFNTH-----FDHISWFARKLSAQTILKYIRDYNS 194 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + +P ++ GDFN K Y + + F S N Sbjct: 195 ------KDPLPVILTGDFNAK-PYSKAIKMLITSNEYVSLNNIFTAFDISDTYINTYHGF 247 Query: 254 -----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K PIDY + + F + + G+ SDH PI Sbjct: 248 SDRLSKYPIDYIFFSND----FVVNDFQILKNKPN-----GEYPSDHFPI 288 >gi|206968110|ref|ZP_03229066.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228950924|ref|ZP_04113045.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068121|ref|ZP_04201428.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229176958|ref|ZP_04304353.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206737030|gb|EDZ54177.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228606433|gb|EEK63859.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228714935|gb|EEL66803.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228808651|gb|EEM55149.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 263 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|188989861|ref|YP_001901871.1| putative exported nuclease [Xanthomonas campestris pv. campestris str. B100] gi|167731621|emb|CAP49799.1| putative exported nuclease [Xanthomonas campestris pv. campestris] Length = 1193 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVS 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ VL +H + Sbjct: 695 GGVPRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA +L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQASYLARLLQARQQLDPAERVLVMGDFN 803 >gi|21111415|gb|AAM39749.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572117|gb|AAY47527.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 1131 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 516 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 572 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 573 DILGTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVS 632 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ VL +H + Sbjct: 633 GGVPRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQR 692 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA +L + +++ ++ GDFN Sbjct: 693 SLNGAETDDAAGTRIRAKR--QAQASYLARLLQARQQLDPAERVLVMGDFN 741 >gi|77747746|ref|NP_635825.2| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761085|ref|YP_241547.2| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 1193 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 38/231 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--------LRQYAKNLDA 66 P A V + ++N+ + + V T + + +R Y Sbjct: 578 PAPRPQADDVAVATYNMERFFDDQNDPAIGEPVL-TPAAFQARLNKASLAIRNYLHT--P 634 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND----IHTAIAVRK---- 118 DI+ E+ + + + + + + ++ + + I V+ Sbjct: 635 DILGTVEVENISVLQTLAARINADAVAAGQQDPKYVAYLQEGNDVGGIDVGFLVKTADVS 694 Query: 119 -KNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVL-----DIHLK 165 RV S G +++ G R + L ++ VL +H + Sbjct: 695 GGVPRVEVVSVAQEGKATTWTEPGGAVSLLNDRPPLVLSTRVHQADGRVLPLTTIVVHQR 754 Query: 166 S--FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFN 212 S D T + QA +L + +++ ++ GDFN Sbjct: 755 SLNGAETDDAAGTRIRAKR--QAQASYLARLLQARQQLDPAERVLVMGDFN 803 >gi|189465293|ref|ZP_03014078.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM 17393] gi|189437567|gb|EDV06552.1| hypothetical protein BACINT_01641 [Bacteroides intestinalis DSM 17393] Length = 284 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 99/312 (31%), Gaps = 49/312 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 ++A V + C+ KV ++S+NI N R + ++ YA Sbjct: 8 SVLVAFVLLVASCSKQPEAKVDVMSFNI---RLDHVADSLNNWKYRKDAAAQMIIYYA-- 62 Query: 64 LDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKKN 120 D+V +QE+ + + P + + + T + K Sbjct: 63 --PDVVGMQEVLKNQLDDLKNRLP--QYTVLGVGRADGKEKGEYCSLFYKTDRFDLMKSG 118 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 L ++ P + A R +++ +GK++ + H F + Sbjct: 119 NFGLSET-PDSIGIKGWDAACERIVTWAVLKDKVSGKELAAFNTH-----FDHIGKVARR 172 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPN 231 S LL + + + S +P VI GDFN + ++D + Sbjct: 173 ESAVLLLAKIREI--------ASDLPVVITGDFNGTV----DSDPISVLTEGGMQNTYSA 220 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ P + + ID+ ++ ++ F I D Sbjct: 221 SDIVYGPTWSFHDF-GRIPVEERQLIDFIFVNGQ----VVANKFRVIADKPD-----NGY 270 Query: 292 LSDHCPISIDYD 303 LSDH PI + Sbjct: 271 LSDHAPIQANLT 282 >gi|86607730|ref|YP_476492.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556272|gb|ABD01229.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] Length = 261 Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 95/310 (30%), Gaps = 80/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA----DIVFLQEMGSYNA 79 +++ +WN+N RT L Q LD+ D++ LQE Sbjct: 1 MQVATWNVN--------------SIRT-----RLPQVLAWLDSQGSLDVLCLQE------ 35 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIA-VRKKNVRVLQQSYPLLGAKD 135 KV ++ + +A + + +++ + L Sbjct: 36 -TKVVDEDF------PRAAFQERGFHVEVYGQKSYNGVALISRDPPEKVERGFGALLPSA 88 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R + + I +L++++ + + S + Y + LKD++ Sbjct: 89 ADLDEQKRLMSAIY-----RGIRILNLYVPNGAEVGSEKYAYK------LRWLATLKDYL 137 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFPKEKDS--------RCN 246 P ++ GDFN + D I ++ + +E + R Sbjct: 138 AVALSQGDPILLCGDFNIALEDRDIYDPQKAGEIMASEPERQALQEILALGFEDAFRRFT 197 Query: 247 ANKNL------------RNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + RN+ ID+ + + + D R ++ S Sbjct: 198 PDPGHFSWWDYRSGGFQRNRGWRIDHHYLSRELQEKATACWI-------DVEPRRAEKPS 250 Query: 294 DHCPISIDYD 303 DH P+ + D Sbjct: 251 DHAPVIVALD 260 >gi|320104698|ref|YP_004180289.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751980|gb|ADV63740.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 375 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 87/278 (31%), Gaps = 42/278 (15%) Query: 11 FFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSV-------KRTTS-DYTLLRQYAK 62 P + + WN+ L + + + R + LL + Sbjct: 61 VGRSPVIQPGGEGYLVCFWNVENLCDDTNDFKNTDPIEDWFATNPRALAHKLDLLAETLL 120 Query: 63 NLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ D++ L E+ + AV + + + H + ++D+ T R+ Sbjct: 121 AMNGGRGPDLLALVEVENRRAVELLRDR-----LHRELPPELHYRHLVHHDLTTG---RR 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT-- 176 +L + L G RR ++ +VE++G ++ VL H S Sbjct: 173 VEPAILSR---LPINPARTRTFGQRRILQAVVEVDGDELAVLVAHWTSRLTDQEGTKRLE 229 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPN 231 Y +C + ++ ++ ++ GDFN R + ID + Sbjct: 230 YGLAC------LEAVEA--LRRLNPAADVLVMGDFNDHPQDRSLTEGLRAGPSPSAIDAD 281 Query: 232 DSLIRF----PKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +L R + +D+ V+ Sbjct: 282 GTLFRLWNLMTLIEPGTAGTYWYRGGWEILDHLVVSPG 319 >gi|269217062|ref|ZP_06160916.1| endonuclease/exonuclease/phosphatase family protein [Slackia exigua ATCC 700122] gi|269129199|gb|EEZ60284.1| endonuclease/exonuclease/phosphatase family protein [Slackia exigua ATCC 700122] Length = 372 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 86/283 (30%), Gaps = 71/283 (25%) Query: 62 KNLDADIVFLQE----------MGSYNAVAKVFPK--NTWC---------IFYSTERLIN 100 + LD D QE + +A+ V P +T+ + I Sbjct: 119 QALDPDFALFQEADVDSTRSYHVNQVDAIKGVMPGYGSTYAANFHSAFLAYPLTDPHGIV 178 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 ++ + D H A AVR+ F R V+ NGK++ ++ Sbjct: 179 NAGLLTMTDAHVASAVRRSYPVSDAFPAKFFDLDRCFEV--LRIPVD-----NGKELVLI 231 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----- 215 + H+ + D +QQ L + ++ E+ + GD+N + Sbjct: 232 NSHMSA---YDEGGTVR-------AQQLAMLNQVLKEEYEAGNYVIAGGDWNHALCGSLE 281 Query: 216 ---NYLGNNDDFWKTIDPNDSLIRFPKEKDSR------CNANKNLR-----NKIPIDYFV 261 + T+ D + + S C + ID F+ Sbjct: 282 MYPSEQQVPSWV-ATLSSEDLAEGYSVVEASNLADVPTCRGDDIPYQKGVTYTTTIDGFI 340 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + N + ++I + G SDH P+ + + Sbjct: 341 VSDN------------VTAAAENIDT-GFEFSDHNPVKLTFSL 370 >gi|226359829|ref|YP_002777607.1| exodeoxyribonuclease [Rhodococcus opacus B4] gi|226238314|dbj|BAH48662.1| putative exodeoxyribonuclease [Rhodococcus opacus B4] Length = 304 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 98/331 (29%), Gaps = 77/331 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--A 81 +R+ ++NIN + + + R D+V LQE+ + A + Sbjct: 1 MRIATFNINGIRAAQRRGFEEWLGDRA---------------PDVVSLQEVRARAAAIPS 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--KKNVRVLQQSYPLLGAKDSFSR 139 VF + + Y + H +AVR V L + + Sbjct: 46 GVFG--RYHLAYDEGEFAGRNGVAILTR-HAPLAVRTWSGTALVQAPGETHLERVELDPQ 102 Query: 140 AGNR-------RAVELLVEINGKKIWVLDIHLKSFCFLDSLEN------------TYSPS 180 R + V++ I V+ ++L L+ Y Sbjct: 103 PLARGLGEFANHGRYIEVDLADAPITVVSMYLPKGGLPAHLQKPGRMRDAPDGGARYDRK 162 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI----- 235 LS A+ L + ++ GD N I + ++ W+ + + + Sbjct: 163 MRFLSAFARQLTRSRRTARARGRELLLMGDLN--IAHTRHDVRNWRRSNQAEGYLPEERE 220 Query: 236 --------RFPKEKDSRCNANKNLRNKI--------------PIDYFVMDQNAYKFLIQE 273 R + R + + IDY + + + + Sbjct: 221 WFDSIVSPRTLVDVVRRHHPGVDGPYSWWSWLGQSFVNDVGWRIDYHLATPHLARAAVTA 280 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D + +R+SDH P+ +DYDF Sbjct: 281 G-------TDRDPAADRRMSDHAPVVVDYDF 304 >gi|319638482|ref|ZP_07993244.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102] gi|317400231|gb|EFV80890.1| endonuclease/exonuclease/phosphatase [Neisseria mucosa C102] Length = 261 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 99/285 (34%), Gaps = 47/285 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---N 78 + V + S+N+ +G+S V+ + L +D++FLQE+ Sbjct: 4 RPVTITSYNM-----HKGMSALNRKVQ-----VNRMADALGALGSDVLFLQEVQGQHLNR 53 Query: 79 AVAKVFPKN-TWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + FP + I S + ++ K H A+ + + + + Sbjct: 54 SRRTDFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNL-NISVNKL 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E++ E + L +HL N P L Q + + D++ Sbjct: 113 EQRGLLH--CEVVPEGWEDPLVCLCVHL----------NLREPD--RLK-QYRAISDYVD 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +IAGDFN + + + +D N+ + ++ K +++P Sbjct: 158 RHINPDSPLIIAGDFND--WRQKSARELGRALDLNEVFVDNTGKRP------KTFPSRLP 209 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 I + + + I + K LSDH P+S+ Sbjct: 210 I-------LSLDRIYTRNLDVIDSEIHNSKDWQH-LSDHLPLSVT 246 >gi|13471433|ref|NP_102999.1| hypothetical protein mll1402 [Mesorhizobium loti MAFF303099] gi|14022175|dbj|BAB48785.1| mll1402 [Mesorhizobium loti MAFF303099] Length = 280 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 51/208 (24%) Query: 10 VFFLVPCTASVAQ-----KVRLVSWNINTLSEQEGVSLWKNSVK----------RTTSDY 54 + C+ ++A +RL ++N+ L + S ++N + R+ ++Y Sbjct: 33 CGLAILCSGALAGKGQGMSLRLATFNVENLMNRFDFSGYRNQLNEDRTLALFDIRSEAEY 92 Query: 55 TLL---RQYAKNLD-------------ADIVFLQEMGSYNAVA--------KVFPKNT-- 88 +L R A++ D ADI+ +QE+ + A+ K+ + Sbjct: 93 KMLEQARAIAQSDDTRQLTALAIAATRADIICMQEVDNIEALKAFEYGYLFKMVGQGYRQ 152 Query: 89 -WCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKDSFSRA 140 + + R I+ + + ++ + V + + P L S + Sbjct: 153 KYTTAGNDSRGIDVAVMMRNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELATLGSQANE 212 Query: 141 G--NRRAVELLVEINGKKIWVLDIHLKS 166 R +E+ + + G + + +H KS Sbjct: 213 RIFRRDCLEVDITVGGVPLTLYLVHFKS 240 >gi|325922580|ref|ZP_08184334.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546930|gb|EGD18030.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 255 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 88/301 (29%), Gaps = 68/301 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSD-YTLLRQYAKNLD 65 AS ++ +R+++ NI S KRT+ D L + Sbjct: 1 MNASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLAG-----E 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE ++ F T + + ++ N + +A + L Sbjct: 56 RDIVGLQE-ADPGSLRSGFTNQTH--YLAERAGFDYWSHQPNRRMG-GVA---SSANGLL 108 Query: 126 QSYPLLGAKDSF--SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L +D R G R + + V HL + + Sbjct: 109 SKLQPLEVQDHALPGRIGGRGILLAKFGEGRDGLAVAVAHLSLG---------ANSRMAQ 159 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 L +I + ++ GDFN + + +L R + + Sbjct: 160 L--------AFIAELLSEHPNAMLMGDFN-----CMADRPEMQ------ALYRHTRLQPP 200 Query: 244 RCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 C + + ID+ ++ + + I++ SDH + +D Sbjct: 201 SCEVHTFPSWRPDRAIDHILVSDS--------------LTIERIEAIPAAFSDHLAVGMD 246 Query: 302 Y 302 Sbjct: 247 I 247 >gi|315503070|ref|YP_004081957.1| exodeoxyribonuclease iii xth [Micromonospora sp. L5] gi|315409689|gb|ADU07806.1| exodeoxyribonuclease III Xth [Micromonospora sp. L5] Length = 265 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 86/302 (28%), Gaps = 65/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N K + R L + D+V LQE + V Sbjct: 1 MRLATWNVN---------SVKARLPR-------LLDWLATTKPDVVCLQETKCPDGAFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + + ++ N +AV R V G + +R Sbjct: 45 AEVGELGYEVASHSDGRWN------------GVAVLSRVGLADVTVGFPGEPGFPEPEAR 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + ++ V +++ + D Y + L+D + + Sbjct: 93 A---------ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALESEV 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIR--------------FPKEKDSR 244 +P + GDFN D + T R P Sbjct: 138 AGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLEDVVPTPMKGP 197 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 + + + + SF+ + + D +GK SDH PI +D Sbjct: 198 -HPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDREARKGKGPSDHAPIVVDA 256 Query: 303 DF 304 D Sbjct: 257 DL 258 >gi|331702659|ref|YP_004399618.1| endonuclease/exonuclease/phosphatase [Lactobacillus buchneri NRRL B-30929] gi|329130002|gb|AEB74555.1| Endonuclease/exonuclease/phosphatase [Lactobacillus buchneri NRRL B-30929] Length = 355 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 99/327 (30%), Gaps = 69/327 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADIVFLQE 73 + +++NI + + S + + K + + D + Q K D ++F QE Sbjct: 53 HPYKAMTFNIGYAAYPDNYSFFMDGGKYSRAFSKFSVLNDLNGIYQAVKQEDPALMFFQE 112 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--------AVRKKNVRVLQ 125 + + + + W S N + + + + Q Sbjct: 113 VDTDGDRSFHVNEVQW---LRDRMNGYSSVYAQNYNSAYLFYPLTRPIGKAKSGLLTLAQ 169 Query: 126 Q------SYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTY 177 Y L D RA+ + NG ++ V+++HL + F + + Sbjct: 170 AKIADSTRYQLPIDTDFNKFMDLDRAISVTHIPVANGHQLAVINLHLSA--FTKNAKVR- 226 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR-----------------KINYLGN 220 Q L +T ++++ ++AGD+N + Sbjct: 227 -------KAQINKLFAKMTTEQQAGNYVIVAGDYNHDMLGNSPAVFETTSKPMNWTHPFP 279 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSE 277 D K + K R N K ID F++ N + Sbjct: 280 ADQLPKGFRIAKQGLAQAKVPSVRANGTPYHPGKTFTSIIDGFIVSDNVQVNRV------ 333 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 +KS G + SDH P +D+ Sbjct: 334 ------HVKSLGFKNSDHNPEVMDFKL 354 >gi|160884105|ref|ZP_02065108.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] gi|156110447|gb|EDO12192.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] Length = 361 Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE + + ++ + S + Sbjct: 125 SYLVDSNADIICLQEYNTA-------TNKKYLTEQDIKKALKAYPYQSVHQQGKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 +P+L + +++ ++ +N + +++ HL+S + Sbjct: 173 DVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLINNHLESNKLTKEDRGMYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINY 217 D +++ + L Q + L + + ++ GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIAESKYPTTIVCGDFN-DGSI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKASDHYPI 354 >gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 251 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 88/311 (28%), Gaps = 90/311 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ VSWN+N L + KN DAD LQE+ Sbjct: 1 MKFVSWNVNGLRAAREKGFDE---------------IFKNFDADFFCLQEIKLQEG---- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + ++ ++ A+ + + + LG ++ Sbjct: 42 ------QIDMDMDGYYSYWNYAKRKG-YSGTAIFTRIEPIDV--FYGLGKEEHDDEGRL- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KK--- 199 + + + +V + N+ L +Q +W + ++ Sbjct: 92 ------ITLEYPEFYVSTV---------YTPNSKQELLRLDYRQ-----EWEDEFREFFK 131 Query: 200 --ESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ P +I GD N + + + + + F Sbjct: 132 NLDAKKPVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREKFTLLLDAGFTDTFRYFYP 191 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + N + IDYF++ + L S + ++ S Sbjct: 192 DKENEYSWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASIHQDVFG-----------S 240 Query: 294 DHCPISIDYDF 304 DHCP+S++ Sbjct: 241 DHCPVSVELSL 251 >gi|229089490|ref|ZP_04220760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693876|gb|EEL47569.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 263 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 39/258 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + I+ S Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKVV 242 Query: 278 ILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 243 FNGTNRKV------ISDH 254 >gi|166363474|ref|YP_001655747.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] gi|166085847|dbj|BAG00555.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] Length = 266 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 77/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE--MGSYNAV 80 +++ +WN+N++ R L L+ +++ LQE + + Sbjct: 1 MKIATWNVNSIRS------------RQEQVINWL-----QLNPVEVLCLQETKVIDRDFP 43 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138 + F + ++ S ++ + +A+ RK + P++G + Sbjct: 44 REAFESLGYHLYISGQKS------------YNGVAIFSRKPLDDITVGFSPIIGENLTGE 91 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R + ++ I ++++++ + LDS + Y L ++L I Sbjct: 92 LDEQKRVITGVIGD----IRIINLYVPNGSSLDSDKYIYKL--KWLETLRKYLDKIIN-- 143 Query: 199 KESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GDFN ++ + K ++ L ++ Sbjct: 144 -SQPEELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIG--LQDAFRKFT 200 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + ID+ + Y+ + D + ++ S Sbjct: 201 SAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPS 253 Query: 294 DHCPISIDYD 303 DH P+ ++ Sbjct: 254 DHTPVILEIS 263 >gi|75759165|ref|ZP_00739268.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493327|gb|EAO56440.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 267 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 43/290 (14%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N+ L+ +N +++ L + + + D++ LQE+ V Sbjct: 4 NMKLLTLNCHSWQEENQIEK----IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKE 59 Query: 90 CIFYSTERLINHSKRDSNNDI-----HTAIAVRKKNV------RVLQQSYPLLGAKDSFS 138 F + + +I H V ++ + ++++ + + + Sbjct: 60 DNFGLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTT 119 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R+ V + NGK I HL + D E+ Q L ++ Sbjct: 120 YWKTRKIVSTTLAYNGKDITFYSCHL--GWWNDEEES--------FKGQVDRL----MER 165 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRN 253 +S + GDFN G ++ D+ ++ + + ++ Sbjct: 166 VDSNKLAFLMGDFNNNARLKGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKH 225 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ID + +Q+ S I + +SDH + + D Sbjct: 226 SLRIDLILCNQSKKV----HSSKVIFNGTN-----RNVISDHFGVEVQLD 266 >gi|310823161|ref|YP_003955519.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|309396233|gb|ADO73692.1| Exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 257 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 72/299 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + R L+ + D++ LQE+ +A Sbjct: 1 MKIASWNVN------------SVRARQERLLNWLKAH----QPDVLCLQELKCVDA---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +A+ + + S +LG D + R Sbjct: 41 ------DFPTEAVREAGYHAVTHGQKTYNGVAI----LSKAEPSDVVLGLSDGVEDSHAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ + V+ ++ + +DS Y + L+ ++ + Sbjct: 91 -----LIAATVSGVRVVSAYVPNGQAVDSPAYVYK------LEWYSRLRRYLEARHTPDQ 139 Query: 204 PFVIAGDFNRKINYLGNNDD-FWK-----TIDPNDSLIRF----PKEKDSRCNANKNLRN 253 P V+ GD+N + D W+ T+ D+L + + + + + Sbjct: 140 PLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDALQQVCAFGLADTFRKLHPGVEKKF 199 Query: 254 KI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ID+ + L++ D + +GK+ SDH P+ Sbjct: 200 SWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEI-------DREERKGKQPSDHAPV 251 >gi|229077725|ref|ZP_04210355.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228705666|gb|EEL58022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 263 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 81/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQSYPLLGAKDSFSRA------GNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + S+ R+ V + NGK I Sbjct: 80 LSHIGYDVYEEGLAIITKHNIIKEDTFFISKNEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNAWLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|253700139|ref|YP_003021328.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251774989|gb|ACT17570.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 246 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 78/260 (30%), Gaps = 51/260 (19%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + + DIV LQE+ I + E + + A Sbjct: 26 RIAEVIDRCNPDIVALQELD-AGLPRTEMIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNA 84 Query: 116 V--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + R + + P SF R R AV VE++G KI VL H Sbjct: 85 ILSRSPVQLIKAGAVPTEPLHPSFER---RGAVWAEVELHGVKIQVLATH--------FG 133 Query: 174 ENTYSPSCSLLSQQAQWLK--DWITQKKESLVPFVIAGDFN-------RKINYLGNNDDF 224 N C QA+ + +W+ + P ++ GDFN ++ +D Sbjct: 134 LNRGERVC-----QARAVTSHEWLGHPECLP-PAILCGDFNALFGSSVYRLLTRHLHD-- 185 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 R P+ + + ID+ + N + + + Sbjct: 186 ----VQRKVKGRLPRGT----WPAQLPFMR--IDHLFVTHNLKVRSVSVPRTPLTRVA-- 233 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+ + + Sbjct: 234 --------SDHLPLVVTLEL 245 >gi|319788428|ref|YP_004147903.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] gi|317466940|gb|ADV28672.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] Length = 256 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 49/208 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ SWN+N+L+ + L Q+ + DIV LQE + Sbjct: 1 MKVASWNVNSLNVRMP----------------HLEQWLRAFAPDIVGLQETKLEDHK--- 41 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFSRA 140 FP ST + + S + +A+ ++ R + P + Sbjct: 42 --FPD-------STLAALGYRSVFSGQKTYNGVAILSREAPRDVLVGVPGFEHEH----- 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RRA+ + + V+++++ + D + Y + L ++ W+ Q+ Sbjct: 88 --RRAISATIGD----LRVVNLYVVNG--QDVGTDKYELKLAWL----AAVRTWLEQEAR 135 Query: 201 SLVPFVIAGDFNRKINYLGNNDD-FWKT 227 V+ GDFN + +D W Sbjct: 136 EHPRLVVLGDFNIAPDERDVHDPAVWNE 163 >gi|118098153|ref|XP_425256.2| PREDICTED: similar to deoxyribonuclease I-like 2 short form [Gallus gallus] Length = 278 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 55/300 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD--YTLLRQYAKNLDADIVFLQEM- 74 +R+ ++NI + SV +D +LR+Y DIV +QE+ Sbjct: 17 CPATAVLRIGAFNIQ---AFGDSKMSDESV----ADVIINILRRY------DIVLVQEVR 63 Query: 75 -GSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 +AV ++ + + S RD+ +++ + + + + + + Sbjct: 64 DSDLSAVTELLEQLNSVSSSPYDYEISG-----PLGRDNYKEMY--LFIYRTDAVSVVDT 116 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLENTYSPSCSLLSQ 186 Y +D FSR + + + + +V+ +H S + L Sbjct: 117 YQYEDPQDIFSREP--FVLRVSAPHSKAEEFVMVPLH--------SAPHDAVAEIDALYD 166 Query: 187 -QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + W V GDFN +Y+ +D + +D + Sbjct: 167 VYLAVVNKW------GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTT 220 Query: 246 NANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + D V+ + ++ S + + + + L SDH P+ + Sbjct: 221 VGKSDCAY----DRIVVCGAKLKRSIVPNSATVYNFQRAFQLEQEEALAVSDHYPVEVKL 276 >gi|86145133|ref|ZP_01063464.1| hypothetical protein MED222_04430 [Vibrio sp. MED222] gi|85836710|gb|EAQ54830.1| hypothetical protein MED222_04430 [Vibrio sp. MED222] Length = 347 Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 43/230 (18%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNAV 80 + ++N+ N L ++N + + +LD D++ QE+ S ++ Sbjct: 7 ITFATFNLLNYLEPPNAYYDFENIYSFDEWQKKQHWMAEAISSLDCDVIGFQEIFSPQSL 66 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRKKNVRVLQQ--SYPLLGAK 134 ++ + + F + ++ ++T IA R V LL A Sbjct: 67 EQLMNELGYPYFAVVDSAD-----VEDDYLYTSPVVGIASRYPIENVQPVTPDSKLLTAF 121 Query: 135 DSFSRAG-NRRAVELLVEING-KKIWVLDIHLKS---------FCFLDSLENTYSPSCSL 183 + NR V + + +H KS +D+ + Sbjct: 122 NLGDNFSFNRTPVHATITLPHLGSTDCYVVHFKSQRPTEPKAESIDVDNAQQGEKSQSDT 181 Query: 184 LSQ-QAQWLKDWI-----------------TQKKESLVPFVIAGDFNRKI 215 L++ + L W+ + ++ P V+ GDFN+ + Sbjct: 182 LTRFHQEQLGSWLSSVQRGLEAQMLHQYITNHRYQTDQPVVLMGDFNKPL 231 >gi|328470608|gb|EGF41519.1| hypothetical protein VP10329_07407 [Vibrio parahaemolyticus 10329] Length = 317 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 89/308 (28%), Gaps = 30/308 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 ++ V+ N+ ++ L + L+ DI+ LQE+ S Sbjct: 6 RITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVFSVEE 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F + F + + + AIA R V + + Sbjct: 66 TRAYFLSFGFPYFATVDT-PKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTPFGVN 124 Query: 140 AGNRRA----VELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCSLLSQQ-----A 188 + +V I + HLKS D+ E + LS Q A Sbjct: 125 EAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTDTPEPSSRAMARWLSTQQRGWEA 184 Query: 189 QWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEK 241 L+D + + + +P V+ GD N+ I+ N+ +T + Sbjct: 185 AMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWHLQTGS 244 Query: 242 DSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYN--EDDIKSRGK----RLS 293 + +DY ++ Q I Y E + + S Sbjct: 245 SLEVRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYENDKNAS 304 Query: 294 DHCPISID 301 DH +S+ Sbjct: 305 DHAFVSLT 312 >gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] Length = 249 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 95/306 (31%), Gaps = 85/306 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L G D+ Q K LDAD LQE A Sbjct: 1 MKLISWNVNGLRACVG------------KDFE---QQFKALDADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + ++ ++ A+ K+ + + D R Sbjct: 45 ISFPGYT----------SYWNYADKKGYSGTAIFTKHKPLDVTYGIGMDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESL 202 + +E++ +++ ++ +S + + ++ Q W+ +KK Sbjct: 91 ---VITLEMDD--FYLVTVY-----TPNSQDGLRRLDYRMKWEKDFQNYLHWLDEKK--- 137 Query: 203 VPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSL----IRFPKEKDS 243 P V+ GD N R + + + + + +P++ Sbjct: 138 -PVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTQLLDSGFIDTFRSLYPEQVTY 196 Query: 244 RCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + R + IDYF++ + L ED SDHC Sbjct: 197 SWW---SYRFRARERNTGWRIDYFLISERLRDRL-----------EDAKIHTEIMGSDHC 242 Query: 297 PISIDY 302 PI +D Sbjct: 243 PIEVDL 248 >gi|228899090|ref|ZP_04063362.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228860531|gb|EEN04919.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 263 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTLAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLKGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|150004910|ref|YP_001299654.1| hypothetical protein BVU_2373 [Bacteroides vulgatus ATCC 8482] gi|149933334|gb|ABR40032.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 336 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 112/355 (31%), Gaps = 75/355 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL------SEQEGVSLWKNSVK-----RT 50 ++K +L L + + R++ +N+ L + + ++ K R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINH 101 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSP---- 116 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160 I A+ ++ + ++L ++ + K+ R R + ++ ++ +G + V Sbjct: 117 ----DERGIDVALLYQRGSFKLLGKNSLSVPYKEM-ERRPTRDILHVMGQVASGDTLDVF 171 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H+ ++ S + +L+ A + I ++ V +I GDFN +Y Sbjct: 172 VCHMPSRAGGEEKSEPYRLFTA-QILNIAADSI---INLRQHPNV--MIMGDFN---DYP 222 Query: 219 GNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQ 272 NN K + + D R R + +D ++ L Sbjct: 223 TNNS-IAKVLGAVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSG---FLLQG 278 Query: 273 ESFSEILYNEDDIKSRGKRL------------------------SDHCPISIDYD 303 Y++ I L SDH P+ +D++ Sbjct: 279 HDSMRTSYDKAQILKYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|91793624|ref|YP_563275.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91715626|gb|ABE55552.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 942 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 63/337 (18%) Query: 19 SVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYT----LLRQYAKNLDADIVFLQ 72 +V +++ S+N +N + G + + S++ + + +DAD+ L Sbjct: 453 AVDADMKVASFNVLNYFNGDGIGGGFPTDRGADSASEFARQKAKIVSAMQAIDADVYGLM 512 Query: 73 EMG-----SYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 E+ S +A+A + + + I + I + R Sbjct: 513 EIENDGFGSNSAIADLVNGLNSAIGEPRYQYIALDGPGIGT------DAITVGMVYRGDK 566 Query: 118 ---KKNVRVLQQSYPLLGAKDS--FSRAGNRRAV--ELLVEINGKKIWVLDIHLKS---F 167 + +VL + L F+ NR + + + +G++ V HLKS Sbjct: 567 VTPEGAAQVLTSANSPLDDNGQVLFNDTKNRPMLTQNFVHQASGEQFVVAVNHLKSKGSS 626 Query: 168 C--FLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 C D N +C+ ++ A + W+ ++ GD +N D Sbjct: 627 CDALGDPDLNDGQANCNVTRTRAATAVAQWLNTVYPEQQ-VLVIGD----LNAYAKEDPI 681 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 ++ F S + +D+ + + ++ I +E Sbjct: 682 -TALEQGGFSELFQHLGHSNAYSYVFSGESGQLDHALASASLLDNVVAAQEWHINTDEPT 740 Query: 285 IKSR-----------------GKRLSDHCPISIDYDF 304 I R SDH P+ + +F Sbjct: 741 ILDYNEEYKSAAQIANLYQGDAYRSSDHDPVIVSLNF 777 >gi|315502378|ref|YP_004081265.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315408997|gb|ADU07114.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 675 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 51/160 (31%), Gaps = 34/160 (21%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A+ + +++ G+++ V+ HL+ D +E + + + P Sbjct: 549 ALGVTLDLGGRELAVVATHLQPPPGRDPVEQAGEVA-------------AFAGRYANGRP 595 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 V+ GD N +D + + + R + R + ID+ + Sbjct: 596 LVLGGDLN-----TEPDDPAFAEFTRAGLVDALAAARPLRTSPADEPRTQ--IDHVFVSP 648 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++++ SDH P+++ Sbjct: 649 G--------------LTAGEVRAPRTEASDHLPVTLTVTL 674 >gi|17545188|ref|NP_518590.1| hypothetical protein RSc0469 [Ralstonia solanacearum GMI1000] gi|17427479|emb|CAD13997.1| putative endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 24/156 (15%) Query: 63 NLDADIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAV 116 +DADIVFLQE+ A++F + + Y + H+ + + H A+ Sbjct: 33 TMDADIVFLQEVQDRNDRLVAAELFDPHYTQLRYLATDVYPHTVYGRNAVYDHGHHGNAI 92 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + +L ++ L D R R + + ++ ++ +L H F + Sbjct: 93 LSRYPILLSEN---LDISDH--RFEQRGLLHAVADLGFGEVHLLCAH-----FGLFARSR 142 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 QA+ L + + P V+AGDFN Sbjct: 143 RR--------QAEALIERVCSVVPIDAPLVVAGDFN 170 >gi|319781575|ref|YP_004141051.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167463|gb|ADV11001.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 16/125 (12%) Query: 53 DYTLLRQYAKNLDADIVFLQEM----------GSYNAVAKVFPKNTWCI--FYSTERLIN 100 D + + AD++ LQE+ ++ + P W + + Sbjct: 19 DLSRAARIVA--GADVIALQEVERHWQRSNFDDQPELLSSLLPDYHWVYGPAFDMDASER 76 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-RAVELLVEINGKKIWV 159 H R N V K V L + + R A+E ++ + V Sbjct: 77 HDGRLVNRRRQFGTMVLSKLPIV-WSRLHALPMRRTLRPLNTRNAALECMIRTPAGPVRV 135 Query: 160 LDIHL 164 L +HL Sbjct: 136 LSLHL 140 >gi|219112079|ref|XP_002177791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410676|gb|EEC50605.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 580 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 65/219 (29%), Gaps = 49/219 (22%) Query: 26 LVSWNINTLSE-----QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++SWN+ LS + L ++ + ADI LQE Sbjct: 3 ILSWNVAGLSTTVNRIHSSYDSPAPKGTKRQPTSAALARFLELHGADIACLQE------- 55 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIAVRKKNVRVLQQSYPLLG 132 K+ PK N + +S + K VL+ LG Sbjct: 56 HKI-PKQQLSSKSEPRHCSNVTGYESFWSCCVDNNKKGLNGVVTYAKQGSVLRADAAPLG 114 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQ 187 + D ++ V + + ++++ + F N S Sbjct: 115 SPDLDAQGRC-------VMTDHGTFVLFNVYVPASGGQPLAFKMKFLNALRRSMR----- 162 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 Q++E P V+ GD N I + D FWK Sbjct: 163 --------KQRQEKQKPVVLVGDLN--IAH-TEKDIFWK 190 >gi|254460874|ref|ZP_05074290.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083] gi|206677463|gb|EDZ41950.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083] Length = 259 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 87/278 (31%), Gaps = 58/278 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNN 108 + L ++ K+ D+ LQE+ S + ++F + + Sbjct: 12 KARIAALPEWLKDAQPDVALLQEIKSVDEGFPRELFEDMGYNV------------ETHGQ 59 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ K + L DS +A A + + I V ++L + Sbjct: 60 KSFNGVAILSKLPLEDVRRG--LPGDDSDEQARWIEATVV----GKQAIRVCGLYLPNGN 113 Query: 169 FLDSLENTYSPS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RKINYLGNNDDFWK 226 + Y + + L +A+ L PF++AGD+N + + + W+ Sbjct: 114 PAPGPKYDYKLAWMARLQARAEAL-------LAEETPFLMAGDYNIIPQDEDARHPEVWQ 166 Query: 227 TIDPNDSLIR----------FPKEKDSRCNANKNLRNKIP------------IDYFVMDQ 264 R + +R + ++ ID+F++ Sbjct: 167 EDALARPESRAAYRRLVNLGLTEAFRARVHGPEHYSFWDYQAGAWNKDDGIRIDHFLLSP 226 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 L+ D G++ SDH P+ ++ Sbjct: 227 AVADILVDCQI-------DMHVRAGEKPSDHVPVWVEL 257 >gi|170734592|ref|YP_001773706.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169820630|gb|ACA95211.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 258 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 61/206 (29%), Gaps = 47/206 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 +V A + +R+ ++NI G W + LDAD++ LQ Sbjct: 13 VVTAAAPGGRDLRIATYNI-----HGGYGAWP------ARAVDRIAAVIDELDADVIALQ 61 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQS 127 E+ ++ H + + + R N + + Sbjct: 62 EVP--------LGGTR------APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCP 107 Query: 128 YPLLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 D F R A++ ++ + I V+ HL L + + Sbjct: 108 IRAARTLDLSFHPREPRGALDADIDCSTGPIRVVATHL-------GLSASERSA------ 154 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN 212 Q Q L +P ++ GD N Sbjct: 155 QVQRLLAAFDT---GAMPVILLGDIN 177 >gi|186475729|ref|YP_001857199.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184192188|gb|ACC70153.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 287 Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 77/321 (23%) Query: 24 VRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------- 74 +RL+SWN+ S VSL RT + L + D++ +QE+ Sbjct: 1 MRLISWNVQWGRSAHGDVSL-----SRTIDEARRLADF------DVLCMQEVTRGFSVLA 49 Query: 75 ----GSYNA-VAKVFPKNTWCIF---------YSTERLINHSKRDSNNDIHTAIAVRKKN 120 A +A + P + + + ++ N A+ R Sbjct: 50 GHPGDDQFAELADLLPG--YTVLGAIGADLAPLKLDAPAAPRRQFGN-----ALVTRLPV 102 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 RV++ S P D + + R A+E +++ G + V+ HL+ + L Sbjct: 103 ERVIRHSLPWPADPD--APSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERL- 159 Query: 181 CSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPN 231 + Q+A + ++ PF ++ GDFN Sbjct: 160 -REMQQEAAAHAANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRML------- 211 Query: 232 DSLIRFPKEKDSRC--NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288 + L P D+ + + I + ++ + ++ +D+++R Sbjct: 212 EPLAGSPSFLDAWTVLHPGQTPPMTAGIY------DKAQWSDGPLTCDFVFVTEDLQARL 265 Query: 289 -------GKRLSDHCPISIDY 302 G R SDH P+ ++ Sbjct: 266 QSCEIDGGTRASDHQPVIVEI 286 >gi|254000148|ref|YP_003052211.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] gi|253986827|gb|ACT51684.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] Length = 250 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 32/196 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---NA 79 +R+ ++NI + +R +NL AD+VFLQE+ N Sbjct: 4 TLRVATFNI-HKGLTSFNARLALHDQREM---------IRNLQADVVFLQEVQDEHHGNG 53 Query: 80 VA-KVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + K +P F + N++ K H AV + +LQ + + A + Sbjct: 54 LRFKHWPAAGQTHFLADACGPNYAYGKNAVYPGGHHGNAVLSRFP-ILQSTTHDISAHEI 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E+ +E + + + +HL L + +Q L+D+I Sbjct: 113 EQRGLLH--CEIAIEGWPQTLHCICVHL-------GLLARWR------FKQFGALRDYIH 157 Query: 197 QKKESLVPFVIAGDFN 212 P VIAGDFN Sbjct: 158 AVIPEDAPLVIAGDFN 173 >gi|237740619|ref|ZP_04571100.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 2_1_31] gi|229422636|gb|EEO37683.1| dnase I homologous protein dhp2 precursor [Fusobacterium sp. 2_1_31] Length = 286 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 102/307 (33%), Gaps = 55/307 (17%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 V L+ F + T S A + + S+NI L + ++ L Q Sbjct: 15 IVSVLMIFTMFSTISSADEAYIASFNI----------LRLGAAEKDMVQTAKLLQGF--- 61 Query: 65 DADIVFLQEMGSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D+V L E+ + + ++ NTW S + + ++ + +K Sbjct: 62 --DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKE-----YFGYVYKK 114 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V+ ++ G + R +I ++ +H + ++ + Sbjct: 115 DKVKFIKSE----GFYKDGKSSLLREPYGATFKIGNFDFTLVLVH---TIYGNNESQRKA 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID----PNDS 233 + ++ + D+ K + +IAGDFN + L + +K D D Sbjct: 168 ENFKMVD-----VYDYFQDKDKKENDILIAGDFN--LYALDESFRPMYKHRDKITYAIDP 220 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 I+ R N D F Q S + ++E D + + +S Sbjct: 221 AIKTTIGTKGRAN---------SYDNFFFSQKYTTEFTGSSG-ALDFSEKDPQLMRQIIS 270 Query: 294 DHCPISI 300 DH P+ I Sbjct: 271 DHIPVFI 277 >gi|55820291|ref|YP_138733.1| hypothetical protein stu0193 [Streptococcus thermophilus LMG 18311] gi|55736276|gb|AAV59918.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 290 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 46/184 (25%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + + S + Sbjct: 40 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSATSIHQDHFVRLLVEKLAE 99 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 100 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 157 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V IHL + D Q ++W I ++ + P ++A Sbjct: 158 VDGREVAVASIHLS---WWDKG------------FQ----EEWARIEERFQSIGKPIILA 198 Query: 209 GDFN 212 GDFN Sbjct: 199 GDFN 202 >gi|4503347|ref|NP_001365.1| deoxyribonuclease-1-like 2 precursor [Homo sapiens] gi|2494172|sp|Q92874|DNSL2_HUMAN RecName: Full=Deoxyribonuclease-1-like 2; AltName: Full=DNase I homolog protein DHP1; AltName: Full=Deoxyribonuclease I-like 2; Short=DNase I-like 2; Flags: Precursor gi|1518784|gb|AAB63981.1| DNase 1 homolog [Homo sapiens] gi|23270879|gb|AAH35205.1| DNASE1L2 protein [Homo sapiens] gi|34500280|gb|AAQ73761.1| deoxyribonuclease I-like 2 long form [Homo sapiens] gi|39645606|gb|AAH63710.1| Deoxyribonuclease I-like 2 [Homo sapiens] gi|119605932|gb|EAW85526.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens] gi|119605933|gb|EAW85527.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens] gi|119605935|gb|EAW85529.1| deoxyribonuclease I-like 2, isoform CRA_a [Homo sapiens] gi|193783655|dbj|BAG53566.1| unnamed protein product [Homo sapiens] Length = 299 Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 13/120 (10%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ D + ++ + Sbjct: 188 LDVIDKW------GTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVG 241 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 N + D V + L +S + + E+ + + L SDH P+ + F Sbjct: 242 NSDCAY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTLKF 297 >gi|229496037|ref|ZP_04389761.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] gi|229317129|gb|EEN83038.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] Length = 334 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 45/181 (24%), Gaps = 47/181 (25%) Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ---WLKDWITQKKESLVPFVIAG 209 NG + V+ +HL S + L QA+ L E ++ G Sbjct: 154 NGVPLHVMVVHLPSRREGKRASDRKRKDVVSL-LQAKCDSILNK------EPGASILVMG 206 Query: 210 DFNRKINYLGNNDD---FW-KTIDPNDSLIR------FPKEKDSRCNANKNLRN--KIPI 257 DFN D W + + R S I Sbjct: 207 DFN-----TTPRDPITHVWAHPLASRRTAYRADLMYDLTSLVPSGVIPGSYRYRGVWQQI 261 Query: 258 DYFVMDQN--------AYKFLIQESFSEILYNEDDIKS------------RGKRLSDHCP 297 D V+ + Y + S + + D +SDH P Sbjct: 262 DRIVVSGSMLLADNPITYLWESARSVMMRRWMQQDADGELSPKRTYGGHFYMGGVSDHLP 321 Query: 298 I 298 + Sbjct: 322 V 322 >gi|107101580|ref|ZP_01365498.1| hypothetical protein PaerPA_01002624 [Pseudomonas aeruginosa PACS2] gi|116050099|ref|YP_791087.1| hypothetical protein PA14_36680 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891892|ref|YP_002440759.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] gi|254235182|ref|ZP_04928505.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254240584|ref|ZP_04933906.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296389425|ref|ZP_06878900.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa PAb1] gi|115585320|gb|ABJ11335.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167113|gb|EAZ52624.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126193962|gb|EAZ58025.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218772118|emb|CAW27897.1| putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] Length = 245 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 84/251 (33%), Gaps = 43/251 (17%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAKVF--PKNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ AD+VFLQE+ S +A P + S + + + Sbjct: 29 LREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVYPEG 88 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV K+ +L + + R +++ G+ + + +HL Sbjct: 89 HHGNAVLSKHP-ILAHRNLDVSVAGNEERGLLHAVIDI-----GRPLHAVCVHL--GLRE 140 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + C L + +++ P V+AGDFN ++ D Sbjct: 141 AQRQRQLQLLC--------ELVAGLPERE----PVVVAGDFN---DWRQRADQLLAGCG- 184 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ ++ + P+ +D+ + + + Sbjct: 185 -----LREVFVGAQGRPARSFPARWPV--LPLDRIYLRNARGRQPRILS------RRPWS 231 Query: 291 RLSDHCPISID 301 LSDH P++++ Sbjct: 232 HLSDHLPLAVE 242 >gi|255540403|ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis] gi|223550381|gb|EEF51868.1| ap endonuclease, putative [Ricinus communis] Length = 326 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 12/71 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + Q ++ ++WN N+L + R +D+ ++ LD D++ +QE+ Sbjct: 35 NTTNKQPLKFITWNANSL------------LLRAKNDWPEFTKFVSTLDPDVIAIQEVRM 82 Query: 77 YNAVAKVFPKN 87 A +K PKN Sbjct: 83 PAAGSKGAPKN 93 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K ++ IDYF++ + +I I+ +G SDHCP+S++ Sbjct: 267 GKYRGKRMRIDYFIVSEKLKGRIISCEMH-----GQGIELQGFYGSDHCPVSLEL 316 >gi|331014335|gb|EGH94391.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 83/316 (26%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + + + + H +A L P L F Sbjct: 38 ---SDEQFPLADVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + + Sbjct: 87 SQKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQF 141 Query: 200 ESLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPND 232 + P ++ GD N R + + W +D Sbjct: 142 SNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFR 201 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 L ++ S + + + ID + + D Sbjct: 202 YLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLR 254 Query: 288 RGKRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 255 GMEKPSDHAPIWLELS 270 >gi|256374352|ref|YP_003098012.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] gi|255918655|gb|ACU34166.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] Length = 821 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 95/332 (28%), Gaps = 77/332 (23%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ--YAKNLDADIVFLQE 73 A+ ++ + ++N+ L+ + + L A D+V L+E Sbjct: 486 SDATGRHELSVATYNVENLAATN-----------DQAKFDRLAAAVVANLRSPDVVVLEE 534 Query: 74 MGSYNAVAK---VFPKNTWCIFYST--------------ERLINHSKRDSNNDIHTAIAV 116 + N A V T+ F + + N +I Sbjct: 535 IQDDNGTANDGTVTASATYQRFTDAIVAKGGPRYQWRQIDPVNNADGGAPGGNIRVGFLF 594 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL---VEIN------------------GK 155 V + ++ S ++ R A+ + +E G+ Sbjct: 595 NPGRVSFVDRAGGDATTPVSVVKSRGRAALSVSPGRIEPANEAWDASRKPLVGEFSFLGR 654 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCS----LLSQQAQWLKDWITQKK--ESLVPFVIAG 209 ++VL H S ++ Y +QA LK ++ + K + V+AG Sbjct: 655 TVFVLANHFNSKGGDQAMHGRYQEPVRSSEEQRLKQATLLKGFVDEVKSVDRGANVVLAG 714 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYK 268 D N + ++ + + N +D+ ++ N + Sbjct: 715 DLN-----DYQFSPVVAKLTEGGQVVDLMSTLPANERYSYVYEGNSQTLDHILLSSNVKR 769 Query: 269 FLIQESFSEILYNEDDIK---SRGKRLSDHCP 297 Y D ++ + SDH P Sbjct: 770 -----------YRYDVVRINAEFADQASDHDP 790 >gi|196040092|ref|ZP_03107394.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196028947|gb|EDX67552.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 263 Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|332187443|ref|ZP_08389181.1| calx-beta domain protein [Sphingomonas sp. S17] gi|332012604|gb|EGI54671.1| calx-beta domain protein [Sphingomonas sp. S17] Length = 1645 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 54/304 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLDA-DIVFLQEMGSYN 78 A + + ++N+ L + + + +L NL A DI+ +QE+ + Sbjct: 856 ANHLSIATYNLENLDP-------------SDNKFDVLASNIVYNLRAPDILAVQEIQDAD 902 Query: 79 A------------VAKVFPKNT------WCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + N + + N +I Sbjct: 903 GAGTGSDLSGTVTAQGLIDSIYAQSGLRYAYIEVAPTTANSTGGEPNGNIRNGFFYNVDR 962 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP- 179 V ++ S L+ + +R + E G+K+ +D+H S D L P Sbjct: 963 VSYVEGSAALITG---SAYNNSRNPLVAQFEFAGQKVTAIDVHFTSRGGSDPLWGNNQPP 1019 Query: 180 -----SCSLLSQQAQWLKDWITQKKESLVPF--VIAGDFN---RKINYLGNNDDFWKTID 229 + QA +K +I + F + GD+N + D + Sbjct: 1020 ADAGDAART--AQAAGVKAYIQEHLADDPSFNVAVLGDWNGFYFEEAQTQLTDPAKGGVL 1077 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS-EILYNEDDIKSR 288 N + + P+E+ S + ID ++ +S + ED Sbjct: 1078 TNLNTLLSPEERYSYLFGGNAQQ----IDNILVTGGLVTNAQYDSVHLNSQFGEDRATDH 1133 Query: 289 GKRL 292 +L Sbjct: 1134 DPQL 1137 >gi|324324468|gb|ADY19728.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 263 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|87306888|ref|ZP_01089034.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] gi|87290261|gb|EAQ82149.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] Length = 253 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 72/254 (28%), Gaps = 41/254 (16%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + D+D++ QE + + + + + + AI RK Sbjct: 28 IERYDSDLLGTQECLPFQEAYLREKLPQYDCYAVSREGKGTAGEEC------AIFYRKSR 81 Query: 121 VRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDS 172 +L Q P S+ + R A + + +G + H F Sbjct: 82 FELLDQGSIALSETPEKIGSVSWDSSLPRIASWVKLRDKQSGHAFTFWNTH-----FDHR 136 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN- 231 + + + LL Q + P V+ GDFN + + + Sbjct: 137 GPKSRTEAAKLLVDQMKA--------TTESGPVVLTGDFNAD-AGSSPHQALATYLRDSW 187 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 S + N + ID+ Q F D KS R Sbjct: 188 KSAKW--EGSAWTFNGWSDKSKGARIDWIFHSQG---------FQATDSTIDRWKSDQGR 236 Query: 292 -LSDHCPISIDYDF 304 SDHCP++ F Sbjct: 237 YPSDHCPVTTTLTF 250 >gi|157371595|ref|YP_001479584.1| endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568] gi|157323359|gb|ABV42456.1| Endonuclease/exonuclease/phosphatase [Serratia proteamaculans 568] Length = 298 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 30/254 (11%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 SD T + + K ++AD+V LQE+ + + + ++ D + + Sbjct: 71 SDMTAIAKAIKAMNADVVALQEVDKLTGRSGKLDQAEELAKLTGMHVVFGRAIDYDGGEY 130 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +A K + YPL + A + + V I +++ HL Sbjct: 131 -GLAFLSKYPLHDSKIYPLPSGQREQRIA---FSAQTDVPEFPAPITLINTHL------- 179 Query: 172 SLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 ++ Q + L D I + ++ GD N W + Sbjct: 180 ----DTKEDPAMRLDQVRELNDRTIEMRGIK----LLFGDMN-----DVPGSVTWTELSR 226 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + P +D R +N K +DY L +S + + D Sbjct: 227 YWN-DIMPAAQDGRSWPAENAEIK--VDYIFSGNAQRWHL--DSLTVPNASGDWNGIHWP 281 Query: 291 RLSDHCPISIDYDF 304 +SDH P+ + Sbjct: 282 AVSDHLPVVAELRL 295 >gi|262377172|ref|ZP_06070397.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] gi|262307910|gb|EEY89048.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] Length = 272 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 71/280 (25%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD++ +QE + K P+ + + ER + Sbjct: 32 LLEWMEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFPAERPG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ + V DS R A E + ++ + + + ++L S D + Sbjct: 81 AIYSRLPFVSLTDGLGFELADSQGRF---IAAEFDLGLD-QTVQICSLYLPSGSSGDEAQ 136 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 L + A+ LK W ++ ++ GD+N I + + W Sbjct: 137 ARKDH---FLEEYAKILKQW----RDENKSVIVCGDYN--IVHKRIDIKNWSG------- 180 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFV---------------------------MDQNAY 267 +K S C ++ + +D+ Sbjct: 181 ----NQKASGCLPHE----RAWLDHIYDELGYVDTFREVRKEAELYSWWSNRGQARAKNV 232 Query: 268 KFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDYDF 304 + I + E + + + SDH P+ IDY Sbjct: 233 GWRIDYHACSPDWKERTVNAWVYKEQWFSDHAPVIIDYKL 272 >gi|224023542|ref|ZP_03641908.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] gi|224016764|gb|EEF74776.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] Length = 356 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 84/264 (31%), Gaps = 68/264 (25%) Query: 60 YAKNLDADIVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE+ S + K FP + R+ A Sbjct: 128 YLEQSEADIICLQEITSSEKQLRKAFPMYPYV-----RRI--------------GFATAN 168 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-------------- 164 + + YP+L AK + + ++I + +++ HL Sbjct: 169 GVACLSK--YPILSAKRIEYASAFNGSALFRLKIGKDTVTLINNHLESNKLDAGDKALYK 226 Query: 165 ---------KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RK 214 K L + + + ++ + QA + I + ++ GDFN Sbjct: 227 ELLKSPDEEKVKTSGKYLWHKLADAVAIRAAQADSVAKVIA--EYGYDRMLVCGDFNDSP 284 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 ++Y + I + + N+NL ID+ + + Sbjct: 285 LSYAR------RVIARGLQDAYVERGNGPGFSYNQNLLY-FRIDHILAGTD--------- 328 Query: 275 FSEILYNEDDIKSRGKRLSDHCPI 298 F + D R R SDH P+ Sbjct: 329 FRILHCEVD----RSIRTSDHYPV 348 >gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e] gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL R2-561] gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e] Length = 256 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----- 254 P +I GDFN + + I + +K ++ + Sbjct: 157 AENSPVIILGDFN-----TEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPI 211 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + E F Y + G SDH P++ + D+ Sbjct: 212 NELEKIDYIFVS---------EEFQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|325180868|emb|CCA15278.1| DNA(apurinic or apyrimidinic site) lyase putative [Albugo laibachii Nc14] Length = 475 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 100/326 (30%), Gaps = 73/326 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNAVA 81 ++VSWN+N L ++R L + L A I+ QE S Sbjct: 5 KIVSWNVNGLRA---------ILQRDKV---KLNDFLHALQASIICFQETKLTRSELDEE 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDI----------HTAIAVRKKNVRVLQQSYPLL 131 PK+ + +S + T + RK + + + Sbjct: 53 LACPKDFDAFYSHCRVRNGYSGVVTFVRSDLPTIAAEEGLTGMWTRKDTIGHVNMGDAEI 112 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ S + + + +++++ + + LE + + L Sbjct: 113 PSQ-MLSELESEGRSVIT---DHGAFILINVYCPAIRNEERLEYKIAFH--------ELL 160 Query: 192 KDWITQKKESLVPFVIAGDFN---RKINYLGN-------------NDDFWKTIDPNDSL- 234 I +++ V+ GD N ++I++ + I L Sbjct: 161 TRRIQTLRKASKRVVLVGDLNVASKRIDHCEPKASEFGEFEAHPCRKWLHRLISSPAPLR 220 Query: 235 ----IRFPKEKDS-RCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNE--D 283 +P +K + C + IDY ++D+ ++ S + + Sbjct: 221 DIYRKLYPDKKKAFTCWNTATMARKNNYGTRIDYILVDEKLQDSVL--SCRSFAFKSILE 278 Query: 284 DIKSRGKRL------SDHCPISIDYD 303 + RL SDHCP+ + D Sbjct: 279 KWLTLAIRLDPERLGSDHCPVFAEID 304 >gi|241762159|ref|ZP_04760242.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753749|ref|YP_003226642.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856531|ref|YP_163434.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|241373409|gb|EER63009.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553112|gb|ACV76058.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775536|gb|AAV90323.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 264 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 97/309 (31%), Gaps = 75/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VSWNIN++ + + ++ K DI+ LQE A V Sbjct: 1 MRIVSWNINSVRAR----------------LAHVERFLKEEQPDILCLQET---KATNGV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP FY + + +A+ + + + + D + R Sbjct: 42 FPS---RFFYDLGYIHQAVHGQPG---YNGVAILSRIAFSPAE----ITSHDWQNNQEAR 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +E + + ++++ + D + +P Q+ ++ I Sbjct: 92 H-IGITLENG---VRLENVYIPAG--GDIPDRDLNP---KFGQKLDFISRMIEWSSHLEQ 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN--------------- 248 P ++ GDFN I L ++ K + S + SR A+ Sbjct: 143 PTILVGDFN--IAPLESDVWSHKQLLKVVSHTPIEVDHLSRLQASHNWIDLGRHFYPAPE 200 Query: 249 ---KNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D+ + L+ +Y + SDH Sbjct: 201 RLYTWWSYRSKDWTKSDRGRRLDHMWASPS----LVDHLVGHKVYES---CRSWIKPSDH 253 Query: 296 CPISIDYDF 304 P+ ++ F Sbjct: 254 VPLLTEFSF 262 >gi|228906140|ref|ZP_04070029.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228853549|gb|EEM98317.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 263 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGVIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SDH + + D Sbjct: 242 VFNGTN-----RNVISDHFGVEVQLD 262 >gi|268567764|ref|XP_002647867.1| Hypothetical protein CBG23668 [Caenorhabditis briggsae] Length = 526 Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 64/220 (29%), Gaps = 32/220 (14%) Query: 3 RKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 + F + +++R+V+ N Q + V R + +Y + Sbjct: 22 EPVIRRESFAALRRNNVAPRQLRIVTLN-AWCLPQPWPIGSTDRVHR----LQKIGEYMR 76 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RK 118 N DIV LQE+ SYN + S + + + T V R Sbjct: 77 NETYDIVGLQELWSYNDFVR----------LSEQVKDAYPYFHYFHSGFTGSGVCVFSRH 126 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLE 174 V L Y L G R + + ++ HL + E Sbjct: 127 PIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHA-------E 179 Query: 175 NTYSPSCSLLSQ--QAQWLKDWITQKKESLVPFVIAGDFN 212 L + Q+ L ++ ++ GD N Sbjct: 180 YDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLN 219 >gi|312602724|ref|YP_004022569.1| endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] gi|312170038|emb|CBW77050.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] Length = 273 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 88/286 (30%), Gaps = 73/286 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 ++R+ ++NI W+ +R+T + LDADI+ LQE+ + Sbjct: 8 ELRIATYNI-----HGAGGRWR---QRST---QRIAGVVAELDADIIALQEVPLNGASNA 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V + E + + + D A+ R SF+R Sbjct: 57 PGVL--DDLQHATGMEAVAGPTLQTERGDYGNAVLSRLPIRAARTLDL-------SFTRR 107 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R A++ +E + V+ HL S Q + L Sbjct: 108 EPRGALDADIEYADGVLRVVATHLGLSAIERSA-------------QVRTLLAAFD---S 151 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI--- 257 S +P ++ GD N + F +R R A + + PI Sbjct: 152 SALPVILLGDIN---------EWFVH-----GRALRALVGHFRRAPAPRTFPARWPILSL 197 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL----SDHCPIS 299 D + ++LI D++ L SDH P+ Sbjct: 198 DRIWVHPG--EWLI------------DVQVHRSALARVASDHLPLI 229 >gi|55822181|ref|YP_140622.1| hypothetical protein str0193 [Streptococcus thermophilus CNRZ1066] gi|55738166|gb|AAV61807.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 46/184 (25%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + + S + Sbjct: 40 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSATSIHQDHFVRLLVEKLAE 99 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 100 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 157 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V IHL + D Q ++W I ++ + P ++A Sbjct: 158 VDGREVAVASIHLS---WWDKG------------FQ----EEWARIEERFQSIGKPLILA 198 Query: 209 GDFN 212 GDFN Sbjct: 199 GDFN 202 >gi|56751512|ref|YP_172213.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81301416|ref|YP_401624.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] gi|56686471|dbj|BAD79693.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81170297|gb|ABB58637.1| Exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] Length = 265 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N++ + L+++ + DIV LQE KV Sbjct: 1 MRIATWNVNSVRSR----------------LEHLQRWLTDQTLDIVCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + + + +A+ R+ V +LGA+ Sbjct: 38 VDE---QFPLEPLQALGYHCAIAGQKSYNGVAILSRQPLADVQIGFGAVLGAEAVGDLDE 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKE 200 +R ++ + ++++++ + L S + Y QQ L D ++ Sbjct: 95 QKR----VISGRSGDLRIINLYVPNGSELGSEKYDYKLRWLTCLQQYLTVLGD----RES 146 Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDDFWKT---IDPNDSLIRFPKEK 241 + I GDFN ++ + ++ + D+ F Sbjct: 147 QIH---ICGDFNIALEDRDIYDPAGKETHIMSSPTEREALRQSVLSLGFVDAFRLFEAGA 203 Query: 242 DSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 D RN+ ID+ + ++A I D ++ SDH Sbjct: 204 DQFSWWDYRTGAFRRNRGWRIDHHYLSESAKARAIACHI-------DREPRTWEKPSDHT 256 Query: 297 PISIDY 302 P+ ++ Sbjct: 257 PVVLEL 262 >gi|255320035|ref|ZP_05361231.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262380541|ref|ZP_06073695.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] gi|255302903|gb|EET82124.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262297987|gb|EEY85902.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] Length = 273 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 87/281 (30%), Gaps = 77/281 (27%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD++ +QE + K P+ + + ER + Sbjct: 32 LLEWLEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFPAERPG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + + + DS R + E + G +++ ++L S D Sbjct: 81 AIYSRLPFISVKDGLGFELADSQGRF-------VTAEFDLGFGYPVYICSLYLPSGSSGD 133 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN------------------- 212 + L + + LK W +E +I GD+N Sbjct: 134 EAQARKD---YFLEEYQKILKQW----REEGKSIIICGDYNIVHKRIDIKNWSGNQKSSG 186 Query: 213 ---RKINYLGNN-DDF-----WKTIDPNDSL--IRFPKEKDSRCNANKNLRNKIPIDYFV 261 + +L + D+ ++ + P L + + N IDY Sbjct: 187 CLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVG------WRIDYQA 240 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + +Y E SDH P+ IDY Sbjct: 241 CSPDWKNRTV----NAWVYKEQWF-------SDHAPVIIDY 270 >gi|224371443|ref|YP_002605607.1| hypothetical protein HRM2_43870 [Desulfobacterium autotrophicum HRM2] gi|223694160|gb|ACN17443.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 369 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 111/364 (30%), Gaps = 110/364 (30%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-----YTLL---RQYAKNLDADIVFLQE 73 + + ++N+ L G++ + Y + + LDA+++ QE Sbjct: 7 RDLSFATFNLLNLQIPGGLTYSNRPPYPDDEEGKKNYYKKVMWTAMQIRRLDAEVIAFQE 66 Query: 74 MGSYNAVAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 + + A+ VF K N + I K A+AVRK ++ Sbjct: 67 LWAKQALIDVFEKAQLQNDYDIV--ARDAPGRGKPQ------VALAVRKD----RNKNSQ 114 Query: 130 LLGA-------KDSFSRAGNRRAV----ELLVEIN-------------------GKKIWV 159 LL D+F R + E+ V I+ +I + Sbjct: 115 LLDGWEWIETFPDNFKFDKLRESYGAEEEITVTIDKFSRPILHAVIQPEGRSPKPPEISI 174 Query: 160 LDIHLKSF-----CFLDSLENT-------YSPSCSLLSQQAQW------LKDWIT-QKKE 200 HLKS F + + + S + + + L + + ++ Sbjct: 175 YVAHLKSKGPARLSFAEPQPDALIHYAKITKSAVSHIRRIMEAGAMRAMLDAVMKCEDED 234 Query: 201 SLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANK--------- 249 ++ P V+ GD N +D + + R ++ + +++K Sbjct: 235 AISPVVLLGDLN--------DDTLSVTNELLSDQPTYRVVEKSSAGRSSDKGLYSAERLQ 286 Query: 250 -------------NLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKR--- 291 + +D+ ++ + Y + SF E+ D + Sbjct: 287 QYRSSRHVYYTHIYKHKRESLDHILVSEEFYDHSRKRLWSFRELEVYNDHLNREAFEEEG 346 Query: 292 LSDH 295 SDH Sbjct: 347 ASDH 350 >gi|182419446|ref|ZP_02950698.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237666690|ref|ZP_04526675.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376777|gb|EDT74349.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237657889|gb|EEP55444.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 265 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 96/271 (35%), Gaps = 45/271 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMG---SYNAVAKVFPKNTWCIFYSTE----RLINHSKRDS 106 L + + D++ LQE+ + + ++ + + E N+ Sbjct: 20 IKYLAKVISEKNYDVIALQEVSQSIDCKIIDGILKEDNFIVLLKEELNKFTKSNYEFYWD 79 Query: 107 NNDIHT-----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + I +A+ ++ + +S+ + + D R+ ++ +EIN K++ Sbjct: 80 FSHIGYDIYEEGLAIMTRHKFINSESFFITKSMDRTY-WKTRKIIKSSIEINNKEVDFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E + QA L D + KK + + GDFN Sbjct: 139 CHL--GWWKDDEE--------PFTYQADKLLDTVNSKKTA----IFMGDFNNNAFVRNEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQE 273 D+ + ND L + D C+A + K+ +D + + L + Sbjct: 185 YDYLINKNLND-LYLKTDKSDEECSATVKGKIDGWDENKEKLRLDLIL----SNNLLKVK 239 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + I + + +SDH + ++ DF Sbjct: 240 NARVIFNGIN-----KEIISDHYGVELEIDF 265 >gi|153809025|ref|ZP_01961693.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] gi|149128358|gb|EDM19577.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] Length = 315 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 95/326 (29%), Gaps = 42/326 (12%) Query: 2 IRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ 59 +R +L + +V C Q + + S+N+ + + +R Y ++ + Sbjct: 3 LRSLLLIALVAVVFCGCHSYQPTSITVASYNLRNANGSDSAKGN-GWGQR----YPVIAK 57 Query: 60 YAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + D DI QE + + + P + + + Sbjct: 58 MVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIE 117 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + + + D+ + G + ++H+ + Sbjct: 118 KGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKKAR 171 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDS 233 S L+ + + L +P ++ GDFN + + Sbjct: 172 VESAYLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCD 225 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL----------- 279 + + + ++ ID+ + ++ +++ I Sbjct: 226 FRYATNGTFNDFDPDSFTESR--IDHVFVSPVFKVKRYGVLTDTYRSIRGNGGKKDATDC 283 Query: 280 YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ F Sbjct: 284 PEEIDIKAYQARTPSDHFPVKVELVF 309 >gi|321477228|gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia pulex] Length = 476 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 88/329 (26%), Gaps = 89/329 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------GS 76 +V+WNIN + + L+ +L ADI+ LQE S Sbjct: 3 NIVTWNINGIRSSQ----------------QNLKDLFDSLGADIICLQETKITRDMLDES 46 Query: 77 YNAVAKVFPKNTWCIFYS-TERLINHSKRDSN-NDIHTAIAVRKKNVRVLQQSYPLLGAK 134 V + + FYS + + +S + + ++ + + Sbjct: 47 TALV------DGYSSFYSFSRKRSGYSGVATYCKNSYSPFQAEEGLAGTFNVHDDKIDFY 100 Query: 135 DSFSRAGNRRAVE---------LLV-----EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 D+ + + + + E + V++++ C + P Sbjct: 101 DNVHSSFTDEGLRALDAEGRCVMTLHKFKKEETSISLVVINVY----CPNAGENDERLP- 155 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKI----------NYLGNNDDFWK-- 226 L + L ++ GD N ++ ++ + W Sbjct: 156 -YKLEF-YRALNLRCHDFLSQGYYVIVLGDMNVSHRLIDHCEPEDVSSFPKSPSRLWLDG 213 Query: 227 -------TIDPNDSLIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESF 275 + + KEK C K IDY ++ L Sbjct: 214 FLHEGGGKFVDSFRHLYPTKEKAFTCWNTKLSARVNNYGTRIDYILLSNQLTDALQDCII 273 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +Y SDHCP+ Sbjct: 274 MSDVYG-----------SDHCPVKSSLAL 291 >gi|313202112|ref|YP_004040770.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] gi|312441428|gb|ADQ85534.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] Length = 250 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 32/196 (16%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---NA 79 +R+ ++NI + +R +NL AD+VFLQE+ N Sbjct: 4 TLRVATFNI-HKGLTSFNARLALHDQREM---------IRNLQADVVFLQEVQDEHHGNG 53 Query: 80 VA-KVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + K +P F + N++ K H AV + +LQ + + A + Sbjct: 54 LRFKHWPAAGQTHFLAEACGPNYAYGKNAVYPGGHHGNAVLSRFP-ILQSTTHDISAHEI 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E+ +E + + + +HL L + +Q L+D+I Sbjct: 113 EQRGLLH--CEIAIEGWPQTLHCICVHL-------GLLARWR------FKQFGALRDYIH 157 Query: 197 QKKESLVPFVIAGDFN 212 P VIAGDFN Sbjct: 158 AVIPEDAPLVIAGDFN 173 >gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] Length = 256 Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK----- 254 P +I GDFN + + I + +K ++ + Sbjct: 157 AENSPVIILGDFN-----TEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRSI 211 Query: 255 ---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + E F Y + G SDH P++ + D+ Sbjct: 212 NELEKIDYIFVS---------EEFQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|295085558|emb|CBK67081.1| Exonuclease III [Bacteroides xylanisolvens XB1A] Length = 361 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 77/261 (29%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE + + ++ S + Sbjct: 125 SYLVDSNADIICLQEYNTA-------TNKKYLTEQDIKKAFKAYPYQSVHQQGKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 +P+L + +++ ++ +N + +++ HL+S + Sbjct: 173 DVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLINNHLESNKLTKEDRGMYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINY 217 D +++ + L Q + L + + ++ GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIAESKYPTTIVCGDFN-DGSI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKASDHYPI 354 >gi|301052087|ref|YP_003790298.1| putative endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis CI] gi|300374256|gb|ADK03160.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus biovar anthracis str. CI] Length = 263 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 41/259 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 ---------HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +A+ K+ V + ++ + KD+ R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTY-WKTRKIVSATIAYNGKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ +S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVNRLV----ERVDSNELSFLMGDFNNNARLQGEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFS 276 ++ D+ ++ + + ++ + ID + I+ S Sbjct: 185 YEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKV 241 Query: 277 EILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 242 VFNGTNRKV------ISDH 254 >gi|73921677|sp|Q68G58|APEX2_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=APEX nuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|51259055|gb|AAH78633.1| Apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 516 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 100/327 (30%), Gaps = 74/327 (22%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQETKVTRDVLT 56 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRV---LQQSYPLLGAKD 135 + F + +S + D T +A + V L G D Sbjct: 57 EPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMD 116 Query: 136 SFSRAGNRR----AVEL-------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 F++ R L +E K + +++++ C + P Sbjct: 117 EFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVY----C---PHADPGKPERLTF 169 Query: 185 SQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGN-----------NDDFWKTID 229 + + L+ + +I GD N R I++ + Sbjct: 170 KMRFYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLS 229 Query: 230 PNDS-------------LIRFPKEKDS-RCN----ANKNLRNKIPIDYFVMDQNAYKFLI 271 PK++ + C ++L +DY + D+ Sbjct: 230 NPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTF 289 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 Q SF SDHCP+ Sbjct: 290 QASF----------LLPEVMGSDHCPV 306 >gi|21541818|ref|NP_084219.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Mus musculus] gi|19912820|dbj|BAB88654.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|22830557|dbj|BAC11807.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|26341548|dbj|BAC34436.1| unnamed protein product [Mus musculus] gi|123223479|emb|CAM21421.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|148675566|gb|EDL07513.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_a [Mus musculus] Length = 516 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 100/327 (30%), Gaps = 74/327 (22%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQETKVTRDVLT 56 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRV---LQQSYPLLGAKD 135 + F + +S + D T +A + V L G D Sbjct: 57 EPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMD 116 Query: 136 SFSRAGNRR----AVEL-------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 F++ R L +E K + +++++ C + P Sbjct: 117 EFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVY----C---PHADPGKPERLTF 169 Query: 185 SQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGN-----------NDDFWKTID 229 + + L+ + +I GD N R I++ + Sbjct: 170 KMRFYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLS 229 Query: 230 PNDS-------------LIRFPKEKDS-RCN----ANKNLRNKIPIDYFVMDQNAYKFLI 271 PK++ + C ++L +DY + D+ Sbjct: 230 NPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTF 289 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 Q SF SDHCP+ Sbjct: 290 QASF----------LLPEVMGSDHCPV 306 >gi|312277609|gb|ADQ62266.1| Metal-dependent hydrolase [Streptococcus thermophilus ND03] Length = 303 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 46/184 (25%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + + S + Sbjct: 53 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSATSIHQDHFVRLLVEKLAE 112 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 113 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 170 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V IHL + D Q ++W I ++ + P ++A Sbjct: 171 VDGREVAVASIHLS---WWDKG------------FQ----EEWARIEERFQSIGKPIILA 211 Query: 209 GDFN 212 GDFN Sbjct: 212 GDFN 215 >gi|301057309|ref|ZP_07198427.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300448539|gb|EFK12186.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 258 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 103/298 (34%), Gaps = 61/298 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ ++Q+G + W R L+ +YA DI+ QE ++ Sbjct: 1 MRVMTFNLRFENDQDGANAW---SCRRDLVVKLIERYA----PDILGTQE-------GRI 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-- 141 P + + S+ + + R+ R+L+ L R+ Sbjct: 47 SPLAYLDAHLTKYDIHMPSRVIDKTCQYPTLFFRRDRFRILEGKEFWLSKTPGIHRSKDW 106 Query: 142 ----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R +E+ +G+ V HL D + T +QA+ + W+ Sbjct: 107 DSAFPRMVSTATLELRESGRIFSVAVTHL------DHMGQTAR------LKQAEIISRWV 154 Query: 196 TQKKESLVPFVIAGDFN---RKINY------LGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 +K VP ++ GDFN + D W+ + + F + Sbjct: 155 REKT---VPVILMGDFNDGPHSDAHAVLASSQTGLSDVWQVLGHAEGKESFTH------H 205 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K ID+ + + Y + ++ G+ SDH P +D+ + Sbjct: 206 GFTGVPKKSRIDWILSSKPPYA--VDARLLHDQFD-------GRYPSDHFPYYVDFTW 254 >gi|37993828|gb|AAR06994.1| sphingomyelinase [Bacillus cereus] Length = 252 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 25/211 (11%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 MSTNQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFP------KNTWCIFYST-----ERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + ++ N + + ++ + + D AI + V + Sbjct: 83 DNSTSNRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSSTPEDGGVAIVSKWPIVEKI 142 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q + D+ S G V ++ N + + V+ HL++ DS+ SP+ S+ Sbjct: 143 QYVFAKGCGPDNLSNKGF---VYTKIKKNDRFVHVIGTHLQA---EDSMCGNTSPA-SVR 195 Query: 185 SQQAQWLKDWITQKKESLVPFVIA-GDFNRK 214 + Q + ++D+I K +V+ GD N Sbjct: 196 TNQLKEIQDFIKNKNIPNDEYVLFGGDMNVN 226 >gi|311109471|ref|YP_003982324.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] gi|310764160|gb|ADP19609.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] Length = 288 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 44/197 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI +R + + L Y L D+VFLQE+ Sbjct: 4 IRVVSYNI--------HKGRSALGRRDSLNELRLGLY--GLRPDLVFLQEVQ-------- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRK--KNVRVLQQSYPLLGAKDSFS 138 +N H + + A A+R + L +P+L ++ Sbjct: 46 -GRNEQKSLLD----AQHESLAAALRLDVAYGRNAIRHETDHGNALLSRFPILDHENLDI 100 Query: 139 ---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + +E+ G+ + +HL F S +Q L + I Sbjct: 101 SDHRLEQRGLLHARIELGGRAVHCFVVHL--GLFAGSRS-----------RQILALTERI 147 Query: 196 TQKKESLVPFVIAGDFN 212 + P +IAGDFN Sbjct: 148 RRMVPDGEPILIAGDFN 164 >gi|149907902|ref|ZP_01896570.1| putative phospholipase C precursor [Moritella sp. PE36] gi|149808908|gb|EDM68839.1| putative phospholipase C precursor [Moritella sp. PE36] Length = 428 Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 21/166 (12%) Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A R + + G V H +S D T + Q + + ++I + Sbjct: 264 QCAATRGVIYTRINKQGYIYHVFATHTQSS--DDDTNRTARLA------QLEEMGEFIRE 315 Query: 198 KKE-SLVPFVIAGDFNRK-INYLGNNDDFWKTIDPNDS---LIRFPKEKDSRCNANKNLR 252 + + ++AGDFN I G+ D ++ + + ++ A K Sbjct: 316 QNIPADEAVILAGDFNVNKIGLPGDRDQMAYILNATEPENKGHNLSFDSNTNNWAEK--P 373 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---GKRLSDH 295 +DY + + L S S+ ++ + LSDH Sbjct: 374 YLEYLDYTLTGNDN---LQPISASQEIFAPRVLTKSLWGNWDLSDH 416 >gi|307727145|ref|YP_003910358.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307587670|gb|ADN61067.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 290 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 81/228 (35%), Gaps = 65/228 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEM-------- 74 +RLV WNI + R D + + A+ L D DI+ +QE+ Sbjct: 1 MRLVDWNIQW---------GRGVDGR--VDLARIVREARALCDFDIMCMQEVTRGFHESP 49 Query: 75 -----------GSYNAVAKVFPKNTWCIFYSTERLIN----HSKRDSNNDIHTAIAVRKK 119 + +A + P T I + L +R N I T + VR+ Sbjct: 50 SAGGLAGGPGADQFAELAALLPGMT-VIDATGSDLPPIGTGSRRRQFGNAIVTRLPVRQ- 107 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL------KSFCFLDSL 173 VL+ S P D + R A+E +++ + + V+ HL + ++ L Sbjct: 108 ---VLRHSLPWPA--DPAKPSMLRVALEAVIDTDVGPLRVISTHLEFYSETQRLAQVERL 162 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFN 212 + +C + A+ ++ PF ++ GDFN Sbjct: 163 RELHREACDHARRPARA--------EKQDSPFADTGRPMSAIVCGDFN 202 >gi|294341555|emb|CAZ89972.1| putative Endonuclease/Exonuclease/phosphatase [Thiomonas sp. 3As] Length = 278 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 93/287 (32%), Gaps = 50/287 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAV 80 ++R+ S+NI+ L KR + L+ + L+ D+VFLQE+ Sbjct: 2 ELRVASYNIH------KGVLGHGPAKR--ASILELQTALQGLEPDLVFLQEVQFLHQRNA 53 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK-----KNVRVLQQSYPLLGAKD 135 ++ L H ++H A ++ L YP++ Sbjct: 54 RRLSGWP---------ALPQHDFLAQALNMHAAYRTNACTRHGEHGNALLSRYPIIDIAH 104 Query: 136 ---SFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 S R R + + V G + + +H F S + +Q L Sbjct: 105 CDVSDHRFEQRGLLHVQVALPKGGPLHCIVVHF--GLFAASRQ-----------RQTDRL 151 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 D+I + + ++AGDFN +G + + K S + Sbjct: 152 LDYIAAQVPAQAALIVAGDFNDWHGRIGPQ-LLQQGLVDVSEPPLKTNGKTSWRKRVRTY 210 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++P + + S SEI RLSDH P+ Sbjct: 211 PARLP-----LMPLDRIYARAFSASEIGLG---WGRAWARLSDHAPL 249 >gi|238020687|ref|ZP_04601113.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] gi|237867667|gb|EEP68673.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] Length = 255 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 89/303 (29%), Gaps = 71/303 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + + + DI+ LQE+ Sbjct: 1 MKIATWNVNSLNVR----------------LPQVSDWLAAHQPDILVLQELKLEQ----- 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + HTA A +K V S L + A Sbjct: 40 ---DKY-----------PAAAFRMMGWHTAWAGQKTYNGVAIISRHPLQDVQTGLPALPD 85 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + ++ I V++++ + LDS + Y Q L +++ + Sbjct: 86 DPQQRVIAATINDIRVINVYCVNGEALDSPKFAYKR------QWFAALTEYVRDQLAQHP 139 Query: 204 PFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + W N L + Sbjct: 140 KLVLLGDFNIAPADDDVYDPQRWHEKILCSGEERQWFANLLNLGLHDALRHIYPTGAHYT 199 Query: 250 NLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + ID+ ++ +S + + + +R SDH P+ Sbjct: 200 WWDYRGAMFAKGLGLRIDHLLISPALR-----DSLRSVNIDSE--ARAQERPSDHAPVVA 252 Query: 301 DYD 303 ++D Sbjct: 253 EWD 255 >gi|218514267|ref|ZP_03511107.1| putative phosphatase protein [Rhizobium etli 8C-3] Length = 272 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 45/178 (25%) Query: 67 DIVFLQEM----------GSYNAVAKVFPKNTWCI-----FYSTERLINHSKRDSNNDIH 111 D++ LQE+ +A +FP W + S Sbjct: 1 DVIALQEVTRGFSRNGFADMVADIAALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQF 60 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 V + ++ L ++ R A E ++ G I V +HL Sbjct: 61 -GNMVLSRWPIASTRTLLLPRSRTLGKINPQRGATEAVINAPGGAIRVYSVHL------- 112 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESL-----------------VPFVIAGDFN 212 + SP + +Q Q+L I + +VI GDFN Sbjct: 113 ---DHVSPDERI--RQLQFLNAQINAFVQEGGSLTGAAEFDLPEPPLPEDYVILGDFN 165 >gi|225548210|ref|ZP_03769495.1| hypothetical protein RUMHYD_00189 [Blautia hydrogenotrophica DSM 10507] gi|225040649|gb|EEG50895.1| hypothetical protein RUMHYD_00189 [Blautia hydrogenotrophica DSM 10507] Length = 368 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 88/271 (32%), Gaps = 52/271 (19%) Query: 60 YAKNLDADIVFLQ--EMGSYNAVAKVFPKNTWCIFYSTERLI--------NHSKRDSNND 109 Y +AD+ + E+ + K+ I+ S H K +S Sbjct: 122 YFVQ-EADVKATRSYEVNQVQMLQNSL-KDYGSIYTSAFHSAYLFYPLTEPHGKTESGLV 179 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFC 168 + V K +P+ +R ++++ K+ + ++++H+ + Sbjct: 180 TFSRYPVTKNIRY----QFPVTKNPIVKFTDLDRCFTASYLKVDTKRDLVLVNLHMSA-- 233 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------ 222 D +Q + L +++ + E + GDFN I G+ D Sbjct: 234 -YDKGGVIRQ-------KQLKRLNEFLKSEAEEGNYVIAGGDFNHDIA--GSKDLYESGQ 283 Query: 223 ----DFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 ++ D + + +I + + C K V+D FL+ + Sbjct: 284 EIPEWIYQLSDSDLAEGYSFVIPENLGEVASCRGADIPYQKNVTYTAVVDG----FLVSD 339 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + S G SDH P+ + + Sbjct: 340 NVK----ATSTVISTGFAYSDHQPVKLTFSL 366 >gi|224002609|ref|XP_002290976.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972752|gb|EED91083.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 562 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 93/300 (31%), Gaps = 70/300 (23%) Query: 24 VRLVSWNINTLSEQEG---VSLWKNSVKRTTSDYTLLRQYAKNL-------------DAD 67 + +VSWNI SL + R +D +LR + N D Sbjct: 5 LTIVSWNIANAQPSAAADCPSLRSQELPRLLTD-EILRSHFFNSPNQQASSQSQPYRHPD 63 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 ++ LQE S + VF T F S ++HS + + QQ+ Sbjct: 64 VIALQESPSPSWATNVF---TQFGFTSMGTQMSHSGYCDLLV----------SAELAQQA 110 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 PLLG +D + A +V N K+ V HL F + + S Sbjct: 111 SPLLGMRDVPAVAAT------VVLPNDIKVAVSSCHLSP--FGEGAYDRQVES------- 155 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDPNDSLIRFPK 239 ++ + + ++ GDFN + ++ WK N L F Sbjct: 156 ----EEIMQAMSKESSNCILMGDFNMRQAEDKTVENLCGGGWIDAWKAGGSNKQLK-FTW 210 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY----NEDDIKSRGKRLSDH 295 + D + + + + N+ ++ G LSDH Sbjct: 211 DSIKNPYYKNGFGFTARFD--------RCYAKGDDLRVMDFNLVGNQSVSENEGDCLSDH 262 >gi|260906117|ref|ZP_05914439.1| Endonuclease/exonuclease/phosphatase [Brevibacterium linens BL2] Length = 313 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 69/241 (28%), Gaps = 57/241 (23%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D DIV +QE+ S + I + HS+ + + + + L Sbjct: 128 DPDIVTIQELESL---------SGKIIHKELDSSFEHSRVVDTIGVWSKWPMSEPEEVDL 178 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +P RA V + I +H+ S E + + L Sbjct: 179 GLQWP--------------RAFATTVSTDHGDIRFYSVHMPS--VRPGHEAMRNAAIRRL 222 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 + + + + ++AGDFN D + T+ P R Sbjct: 223 ATEVE---------TDEAEHVIVAGDFN-----TATTDTNFSTLSPPLEDTRVEAGGGFG 268 Query: 245 C-NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +D+ + + D++ RG SDH + D Sbjct: 269 FTWPARFPVTR--LDHVL-------------YRGFDATSDEVLDRGS--SDHRAVVAGLD 311 Query: 304 F 304 Sbjct: 312 L 312 >gi|77736625|ref|NP_001029987.1| deoxyribonuclease gamma [Gallus gallus] gi|73532981|gb|AAZ76744.1| DNase-gamma [Gallus gallus] Length = 307 Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 7/111 (6%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I Q ++ FV GDFN +Y+ + + + + Sbjct: 173 IKQHWDT-ENFVFMGDFNAGCSYVPRKHWKNIRLRTSSEFAWLIGDTNDTTVRRST---S 228 Query: 255 IPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V+ ++ S + + S + L SDH P+ + Sbjct: 229 CPYDRIVVSGEQLSQAVVPHSATIFDFQTAFQMSEEQALGVSDHFPVEFEL 279 >gi|299144762|ref|ZP_07037830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515253|gb|EFI39134.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 336 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE + + ++ + S + Sbjct: 100 SYLVDSNADIICLQEYNTA-------TNKKYLTEQDIKKALKAYPYQSVHQQGKG----- 147 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 +P+L + +++ ++ +N + +++ HL+S + Sbjct: 148 DVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLINNHLESNKLTKEDRGMYE 207 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPF------------VIAGDFNRKINY 217 D +++ + L Q + L + + ++ GDFN + Sbjct: 208 DMIKDPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIAESKYPTTIVCGDFN-DGSI 266 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 267 SYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY-------- 313 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 314 -----NCTVDRSIKASDHYPI 329 >gi|298375999|ref|ZP_06985955.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267036|gb|EFI08693.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 348 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 110/363 (30%), Gaps = 85/363 (23%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY 54 ++ ++ L+FF P + A +++++N+ ++ + L + T S Y Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 55 -TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKN-----TWCIFYSTERLINH 101 L+Q AK + A ++ L E+ + + ++ + + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSPDP-- 117 Query: 102 SKRDSNNDIHTAIAV-RKKNVRVLQQSYPLL--GAKDSFSRAGNR-RAVELLVEINGKKI 157 I+ A+ R + + +S P+ G K +R + G + Sbjct: 118 ------RGINVALLYQRNQFFYLRHESIPIRFSGNKHKLTRDILHVYGKIIT----GDTL 167 Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 V H S + + L + L +I GDFN Sbjct: 168 DVFVCHFPSRYGGEKESEKDRFDAARTLRGSSDSL-----LLIREKPQILIMGDFN---- 218 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDS-RCN---------------ANKNLRNKIPIDYF 260 D I + + DS C ++K +D Sbjct: 219 -DTPQDRSISEIFAAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQI 277 Query: 261 VMDQN-----AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPIS 299 +++++ + +I ES + SDH P++ Sbjct: 278 IVNRDLITQESSMHIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLT 337 Query: 300 IDY 302 +D+ Sbjct: 338 VDF 340 >gi|329847963|ref|ZP_08262991.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] gi|328843026|gb|EGF92595.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] Length = 278 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 93/315 (29%), Gaps = 61/315 (19%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 L + + Q +R++S+NI + N +R + L + Sbjct: 6 PVALLSLTACATLPEAAPQTLRVMSYNIRY----ANDADRPNWGERREA----LAKQVAF 57 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D DI+ +QE + + + D N T + R+ Sbjct: 58 TDPDILGVQEAQPVQVAYLAAQWPGYDHY-------GLGRDDGVNGETTTLFWRRDRFET 110 Query: 124 LQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLEN 175 + +S+ P K + A R L++ +GK + V + HL D+ Sbjct: 111 VSKSHQWCSPTPDRPGKGWDA-AWPRTITRLVLRDRLSGKVLDVRNTHL------DNEGA 163 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-SL 234 +C+ +Q + ES ++ GD N G + ++ + + L Sbjct: 164 VARENCA---KQVAGIVV------ESGALVIVLGDMN-----SGPDSAPYRVLTGDALGL 209 Query: 235 IRFPKEKDSRCNANKNLRN-------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 K ID+ + + Y Sbjct: 210 KDARKAATVDFGPPGTFNGFDLSATQGEAIDHIFV---------PRGLAVTRYGVLTDSF 260 Query: 288 RGKRLSDHCPISIDY 302 GK +SDH P+ D Sbjct: 261 SGKVISDHFPVVADI 275 >gi|326432699|gb|EGD78269.1| hypothetical protein PTSG_09334 [Salpingoeca sp. ATCC 50818] Length = 514 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 89/258 (34%), Gaps = 64/258 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-------- 75 +R+VSWNIN L+++ + RT Y + ++++ D+V LQE+ Sbjct: 225 LRVVSWNINGLTDRPS------RLPRT---YIHMCDELRSVEPDVVLLQEVEPTYYDHLL 275 Query: 76 ----SYNAV------AKVFPKNTWCIFYSTERLINHSKRDSNND------IHTAIAVRKK 119 S + N F D + + T +R+ Sbjct: 276 LVMQSLGFIACHDQPRMAAAANPMLAFMFAAAGGGVGMYDMDTNPTRAPPYFTMSFIRRG 335 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + ++ + + + +++ + +++W+ ++HL+S C S + Sbjct: 336 RLSLMSHR---RTPFHNTNMMRDLNTLDVRCDRTMRRLWIGNVHLES-CKEYSQQR---- 387 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKI-NYLGNN-----DDFWK 226 C ++ Q L + ++ GD N R + YL ++ DD W Sbjct: 388 -CQQFTECLQALD-----RHAVG---IVIGDTNLRDPEARRTLDAYLTSHPQSGIDDAW- 437 Query: 227 TIDPNDSLIRFPKEKDSR 244 + + R+ + Sbjct: 438 LMAGSPPAARWTWDTRVN 455 >gi|290958905|ref|YP_003490087.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260648431|emb|CBG71542.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 364 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 23/125 (18%) Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 ++ L+ W K+S P ++AGDFN ++ + R + Sbjct: 256 TWRRELDALRAWAA--KDSKTPAILAGDFNASQDHAAFRAVLDTGLSD---AARLTGQDR 310 Query: 243 SRCNANKN-LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS--DHCPIS 299 ++ R ID+ ++ + S I + +LS DH ++ Sbjct: 311 RPTWPSRTTPRFGAQIDHVLVSHEDF------SARGIRF---------LKLSGTDHEAVT 355 Query: 300 IDYDF 304 +D Sbjct: 356 VDLAL 360 >gi|126727467|ref|ZP_01743301.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] gi|126703247|gb|EBA02346.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] Length = 334 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 96/334 (28%), Gaps = 55/334 (16%) Query: 24 VRLVSWNINTLSE----QEGVSLWKNSVKRTT----SDYTLLRQYAKNLDAD-IVFLQEM 74 +R+ ++N+ + + + KR L + +DAD I+ ++ Sbjct: 1 MRIATYNVEWFNALFDDDGQMINDASWSKRYNVTKAQQTAALGAVFQAMDADAIMVIEAP 60 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S+ V+ + + ++ + ++ A Sbjct: 61 DSHRGRDGVYALEGFAAHFGLRARSGVIGYSNDTQQEIILMYDPDVLQASHAPQASDAAP 120 Query: 135 DSFSRAGN--------------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + +E+ ++ +H KS + Sbjct: 121 SFEEEFKLDLDLDSHPDPIVFSKPPLEVSAVKGDFAFNLIGVHAKSKAPHGASNPKEVMQ 180 Query: 181 CSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFNRK------------------INY 217 S+ ++ Q WL+ + + + P ++ GDFN + Sbjct: 181 ISIQNRRKQLAQCIWLRARVAEHLAAKTPLIVLGDFNDGPGLDEYERLFGRSGVEIVLGE 240 Query: 218 LGNNDDFWKTIDPNDSLIRFPKE-KDSRCNANKNLRN-KIPIDYFVMD----QNAYKFLI 271 +++ + R P SR R +DY ++ + + I Sbjct: 241 GADDEKLYDPHAQRALSQRLPANFTTSRFFLRHEKRYLSALLDYIMVSSDLKEKNPAWHI 300 Query: 272 QESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 F + D+ R L SDH P+++D D Sbjct: 301 WHPFDD-PACYGDLNLREALLAASDHFPVTLDID 333 >gi|86131132|ref|ZP_01049731.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85818543|gb|EAQ39703.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 312 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 89/302 (29%), Gaps = 47/302 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81 K+ + SWNI L KR T L+ + D++ +QE+ + + Sbjct: 38 KLLIASWNIANLGLH----------KRWTIHAALIAEIIDWF--DLIAIQEVNVNLEGLR 85 Query: 82 KVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++ + + + +S + N + V K+ V + + P K Sbjct: 86 QIEAALPSHYNLLFSDKAGNNERFAYIFDSR-----VVKQLEMVGEVAIPPKDHKYIKLP 140 Query: 140 AGN-------RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R + +L++H + + +++ + Sbjct: 141 GVTSSFTGFDRNPYLGSFQWRNTNFVLLNVHSYFGSNSKKNIHRRALETYAIARHTDLMG 200 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 K + GDFN + + D +K + + R + N+ Sbjct: 201 ---NSKYAFSDKIIALGDFN--LPLVEPGDLIYKAL-----VKRGLELPKHSTKVYSNIA 250 Query: 253 NKIPIDYFVMDQNAYKFLIQES---FSEILY------NEDDIKSR-GKRLSDHCPISIDY 302 + D + + F ++ + KS LSDH PI + Sbjct: 251 DDKMYDQIAFLPSLKNTIQANGTFDFDNAVFPDLWQESHSRFKSYVKYYLSDHRPIWMQI 310 Query: 303 DF 304 F Sbjct: 311 AF 312 >gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7] Length = 250 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLVSWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFSKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S L+ + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|325980885|ref|YP_004293287.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325530404|gb|ADZ25125.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 324 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 95/296 (32%), Gaps = 71/296 (23%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK-RDSNND 109 + ++A+ AD++ LQE+ + S E L + R + D Sbjct: 57 EQRLKAVAEFAEKTPADVILLQEV---------VGGSLVHTENSAEDLQKELRARKRDYD 107 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR---------RAVELLVEIN------- 153 ++TA + V+ + +L + R R R ++ + N Sbjct: 108 LYTAFEI--GLPGVIGVANAILSRCEIDFRTTRRLPHATELNFRGHDIKLPRNVMMTRIN 165 Query: 154 ---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES--LVPFVIA 208 K+ + + HL + C D L Q + +I++ + S F I Sbjct: 166 IPHSSKLNIYNTHLCAACTADQ-----------LDAQLDIMLPFISELEASFPSNNFTIL 214 Query: 209 -GDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL- 251 GDFN +I G D + + P D+L P + D C + Sbjct: 215 GGDFNIDRFRTDPFVERPFYDRIVSAGFIDAYAQN-RPLDNLFANPGQADMHCTVGVSTL 273 Query: 252 ---RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + IDY M+ + F+ + + +SDH + + Sbjct: 274 DAGGSARRIDYIFMNTEKRLRESRVVFNTL------VDPDQTSVSDHAGVFVSVTL 323 >gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38] gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38] Length = 250 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|291302070|ref|YP_003513348.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290571290|gb|ADD44255.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 268 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 93/308 (30%), Gaps = 67/308 (21%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINT-LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++AL +V VR++++NI E ++ ++ RT + +R++ Sbjct: 17 IVALTGPVVATPQEAKSVVRVLNYNIQAGRGAGEDPNVDPPNIPRTAA---AIREH---- 69 Query: 65 DADIVFLQEM--------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D DIV LQE+ +A N + N S + N I T + + Sbjct: 70 DPDIVTLQEVHQPDTSGADQVAQLAAELDMNAYF----GPADGNGSGGQAGNAILTKLPI 125 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 ++ R L K + + A G I V HL + Sbjct: 126 VERVNRRLPDDPDTNNVKRALAGAKLDLG-------GGAFIRVFTTHLSPGLSDAVVAER 178 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + Q + W P + GDFN + N W D Sbjct: 179 EA--------QGR----WALDYLSHSGPLLFTGDFNER---PENRIHAWALADGF----- 218 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + ID+ A L+ ++ + SDH Sbjct: 219 --ADTGGEVAPDPTH-GDARIDFVYARGVTATAGLVPDTDA----------------SDH 259 Query: 296 CPISIDYD 303 P+ ID + Sbjct: 260 RPVVIDLE 267 >gi|268561416|ref|XP_002646438.1| Hypothetical protein CBG18823 [Caenorhabditis briggsae] Length = 382 Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 36/161 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWK---------------NSVKRTTSDYTLLRQYAKNLDAD 67 ++ L+SWNI+ L + + K R + + + ++ D Sbjct: 113 ELSLMSWNIDGLDGRSLATRMKAVATIVKKTPQNPIFRPKNRVLEIFQKIAR-MAQVNPD 171 Query: 68 IVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 I+FLQE+ + K+ ++ + I+YS + +TAI V K Sbjct: 172 ILFLQEVVDRDLEPIDKL--QSLYKIYYSNKGC----------QYYTAILVSKMFEVEKH 219 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + R + I G K+++++ HL+S Sbjct: 220 ------DVVHFQNSGMYRTLQIVEGSIGGMKVFLVNTHLES 254 >gi|206974292|ref|ZP_03235209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus H3081.97] gi|217957955|ref|YP_002336499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH187] gi|222094154|ref|YP_002528211.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus Q1] gi|229137219|ref|ZP_04265836.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|206747532|gb|EDZ58922.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus H3081.97] gi|217066613|gb|ACJ80863.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH187] gi|221238209|gb|ACM10919.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus Q1] gi|228646214|gb|EEL02431.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 263 Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN- 221 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANK----NLRNKIPIDYFV 261 + + + + K++ + ++ + ID + Sbjct: 186 EYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|298373308|ref|ZP_06983297.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274360|gb|EFI15912.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] Length = 370 Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 107/326 (32%), Gaps = 92/326 (28%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + ++ + ++++L+S+NI++L D+ + ++DA Sbjct: 95 FTIPYTVITGHKPLDKEIKLLSYNISSLGSV--------------RDFDQFMGFIDSIDA 140 Query: 67 DIVFLQE----MGSYNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 DIV QE + + + K KN + + + N+S +A Sbjct: 141 DIVCFQEFGYYVHHKDRLKKAMEKNYPYSHIWYKNQSRNYSW---------GVA------ 185 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF------------ 169 +P++ K + ++ ++I I V++ HL+S F Sbjct: 186 --TFSKHPVINKKKIEYSSRYNVSIYSDIDIGDDTIRVINNHLESNKFTLADIRQYRTLD 243 Query: 170 ----LDSLENTYSPSCSLLSQ--QAQWLKDWITQKKESLVPF--VIAGDFN---RKINYL 218 +++ NT S L + + + + + + P+ V+ GDFN Y Sbjct: 244 NDLSGNNILNTSSLFSRKLGEAYKIRATQAAMVRATIDSSPYKSVVCGDFNDVTESYAYS 303 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQE 273 D L + ID+ ++D LI Sbjct: 304 KIKDGL-------TDLFTATAW-------GYRYSFRSNYMLVGIDHILIDHR----LIPL 345 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPIS 299 S + D K+ SDH P+ Sbjct: 346 SLTI------DRKNY----SDHYPLI 361 >gi|91763300|ref|ZP_01265264.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] gi|91717713|gb|EAS84364.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] Length = 258 Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 102/305 (33%), Gaps = 78/305 (25%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP 85 + SWN+N++ + +++Y + ++V +QE+ + + + FP Sbjct: 3 ITSWNVNSVRAR----------------IENIKEYLQKFSPNVVMMQEIKTQD---ETFP 43 Query: 86 KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA 145 + + +++ + +A+ + L + + +++ Sbjct: 44 YDDF-------SALDYESHVFGQKSYNGVAI--------ISKHKLENVRIDLIKDKLKQS 88 Query: 146 VELLVEINGKK--IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK---E 200 + E+ KK + +++I+ + +D+ + TY WL I Q K + Sbjct: 89 RIISAELKHKKKNVQLINIYTPNGNPVDTDKYTYKKD---------WLDKLIKQLKTLSK 139 Query: 201 SLVPFVIAGDFN--------RKIN-------YLGNNDDFWKTIDPND--SLIRFPKEKDS 243 ++AGDFN I Y ++ + R + Sbjct: 140 KNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKFREMINLGFHDAYRHIHGEKE 199 Query: 244 R------CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 N + ID+F++ + + + ++ ++ SDH P Sbjct: 200 GYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINKDP-------RGKEKPSDHTP 252 Query: 298 ISIDY 302 I I+ Sbjct: 253 IEIEL 257 >gi|28869934|ref|NP_792553.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] gi|28853179|gb|AAO56248.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] Length = 270 Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 43/193 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + + + + H +A L P L F Sbjct: 38 ---SDEQFPLADVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHF 141 Query: 200 ESLVPFVIAGDFN 212 + P ++ GD N Sbjct: 142 SNEQPLIVMGDVN 154 >gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75] Length = 250 Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRISWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|253569392|ref|ZP_04846802.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841411|gb|EES69492.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 361 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE S + + + S ++ Sbjct: 125 SYLADSEADIICLQEYNSTK-------NKKYLTDEDIRKALKAYPYRSIHNPEKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--------CFL 170 + +P+L A+ + +++ +++N I +++ HL+S + Sbjct: 173 GSQLACFSKFPILSARPIKYESTYNGSMQYTLKVNEDTITLINNHLESNKLTKEDKVIYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIA------------GDFNRKINY 217 D +++ + L Q + L + + +A GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSKYPTIIACGDFN-DASI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQQLDD-----AFTQSGRGLGISYNLNKFYFRIDNILISPNQKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKDSDHYPI 354 >gi|162148012|ref|YP_001602473.1| exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] gi|161786589|emb|CAP56171.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] Length = 259 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 82/309 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N + +R + + + D++ LQE+ +A Sbjct: 2 MKIASWNVN------------SVRQRQ----AHVLDWLEREKPDLLGLQEIKCEDAS--- 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSFSRAGN 142 FP + R + + +A+ + V ++ P L + +R Sbjct: 43 FPAEAF-------RAAGYDCVVVGQKSYNGVAILSRLPFSVTARALPFLDGEALQAR--- 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + +E G + +++L + S + E+ Sbjct: 93 ----YVEIEAGG--LTFGNLYLPNGNSGGSAGYEAKLAFMEALALHAR------ALLEAG 140 Query: 203 VPFVIAGDFN----------------------------RKINYLGNNDDFWKTIDPNDSL 234 FV+AGD+N R++ +LG D + + P+ Sbjct: 141 RDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRLIWLGLTDAL-RALHPHGRY 199 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 F + + + ID+ ++ + L D + + SD Sbjct: 200 YTF-WDYQAGAWPRDC---GLRIDHALLSPRIAERLDSAQ-------PDRDERGRAQPSD 248 Query: 295 HCPISIDYD 303 H P+ I D Sbjct: 249 HVPLVITLD 257 >gi|83643892|ref|YP_432327.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396] gi|83631935|gb|ABC27902.1| Metal-dependent hydrolase [Hahella chejuensis KCTC 2396] Length = 265 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 73/250 (29%), Gaps = 51/250 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 LL QY D+V LQE + + + + S H + + Sbjct: 55 ALLSQY------DVVALQECDGGSIRSGFVNQVEYLAEKSG-----HPYWFQQLNRNLGR 103 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + N + + + R A+ + V+ +HL Sbjct: 104 IAQHSNGLLSRYRPNSVTQHKLPGVIPGRGAIIATYGDPTNPLVVVMLHLSLG------- 156 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 C L + ++ + V+ GD N L ++ +L Sbjct: 157 --EKAQCQQLEHVCKLIEGY--------EHVVLMGDLNNHAEQLLSSTAL-----GRTTL 201 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + P+ R N + R + +D+ ++ L + + + SD Sbjct: 202 VSLPE----RVNTFPSWRPERSLDHIMVSPG----LQIRNAGVVCFPV----------SD 243 Query: 295 HCPISIDYDF 304 H P+++D Sbjct: 244 HLPVAVDVAL 253 >gi|329768187|ref|ZP_08259690.1| hypothetical protein HMPREF0428_01387 [Gemella haemolysans M341] gi|328838034|gb|EGF87655.1| hypothetical protein HMPREF0428_01387 [Gemella haemolysans M341] Length = 354 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 82/212 (38%), Gaps = 30/212 (14%) Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + I+TA + +N R Q + P + + + VE + K + +++ HL Sbjct: 159 VKSGIYTATDFKIENARRFQMAIPFTFPERLANLKRGFSVIYTKVENSDKHLVLINAHLD 218 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---- 221 ++ +S + Q + L ++I + + ++ DFN+ + L + Sbjct: 219 AYDKGNSGK----------KAQMKQLLEFIDYEYKKGNYVLVGADFNQSLKTLTQDEINV 268 Query: 222 --DDFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + W+ + + SL+ + +R N +++ F++D ++ Sbjct: 269 VPKELWRAENLDKSLLPVGFKLVYDESKNSARLNNKPYVKDSEGTYGFIIDG----YIAS 324 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + ++ R SDH P+ + Y Sbjct: 325 DNIEVLGV---ETLNQEYRYSDHNPVKLRYKL 353 >gi|209966133|ref|YP_002299048.1| endonuclease [Rhodospirillum centenum SW] gi|209959599|gb|ACJ00236.1| endonuclease [Rhodospirillum centenum SW] Length = 287 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 95/290 (32%), Gaps = 67/290 (23%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++ + +WNI + + +RT + LDAD+V LQE+G Sbjct: 30 SVPPGYGRLCVATWNI----HSCVGMDARFAPERT-------ACVIRGLDADVVGLQEVG 78 Query: 76 SYNAVAKVFPKNTWCIFYST---ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 ++ + + + L +K + A N + ++ + Sbjct: 79 WHH--RGEMGVDQFAFLEAATGYRALAGPTKHNR--------AAHYGNALLTRRPVLEVA 128 Query: 133 AKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D R + +++++G ++ V+ HL LD E Q + Sbjct: 129 PLDLAMPMREPRGGLCAVLDLDGVEVQVIVAHL----GLDPWERNA---------QVTRI 175 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 ++ + P V GD N W+ P + E+ C A ++ Sbjct: 176 LSFLDAR--PPRPTVFMGDLNE-----------WR---PKAPRLARLSERLPDCAAPRSF 219 Query: 252 RNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++P +D + L SF + + +R SDH P+ Sbjct: 220 HARLPTLRLDRIFVSPT----LHLASFEVVR------SAMTRRASDHLPV 259 >gi|330965345|gb|EGH65605.1| exonuclease III [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 82/316 (25%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + + + + H +A L P L F Sbjct: 38 ---SDEQFPLADVEALGYHVHFHGQKGHYGVA--------LLSRSPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIRGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGHF 141 Query: 200 ESLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPND 232 + P ++ GD N R + + W +D Sbjct: 142 SNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFR 201 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 L ++ S + + + ID + + D Sbjct: 202 YLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLR 254 Query: 288 RGKRLSDHCPISIDYD 303 ++ SDH PI ++ Sbjct: 255 GMEKPSDHAPIWLELS 270 >gi|237709161|ref|ZP_04539642.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA] gi|229456857|gb|EEO62578.1| metallophosphoesterase [Bacteroides sp. 9_1_42FAA] Length = 276 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 12/74 (16%) Query: 4 KYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K L L+F L+ ++ +Q +RL+++NI + + V D+ + Sbjct: 31 KKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVIN 79 Query: 63 NLDADIVFLQEMGS 76 ++ ++V LQE+ S Sbjct: 80 HIHPEVVALQELDS 93 >gi|213967028|ref|ZP_03395178.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] gi|301385213|ref|ZP_07233631.1| exonuclease III [Pseudomonas syringae pv. tomato Max13] gi|302059606|ref|ZP_07251147.1| exonuclease III [Pseudomonas syringae pv. tomato K40] gi|302130154|ref|ZP_07256144.1| exonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928350|gb|EEB61895.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 43/193 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + + + + H +A L P L F Sbjct: 38 ---SDEQFPLADVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFESDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + + Sbjct: 87 SQKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQALLEGQF 141 Query: 200 ESLVPFVIAGDFN 212 + P ++ GD N Sbjct: 142 SNEQPLIVMGDVN 154 >gi|212692517|ref|ZP_03300645.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855] gi|212664928|gb|EEB25500.1| hypothetical protein BACDOR_02013 [Bacteroides dorei DSM 17855] Length = 276 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 12/74 (16%) Query: 4 KYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K L L+F L+ ++ +Q +RL+++NI + + V D+ + Sbjct: 31 KKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVIN 79 Query: 63 NLDADIVFLQEMGS 76 ++ ++V LQE+ S Sbjct: 80 HIHPEVVALQELDS 93 >gi|163761164|ref|ZP_02168241.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] gi|162281715|gb|EDQ32009.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] Length = 346 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 79/238 (33%), Gaps = 39/238 (16%) Query: 26 LVSWNINTLSEQEGV-SLWKNSVKRTTSDYTLLRQYAKNL----DADIVFLQEMGSYNAV 80 + + N+ + K + + +++ + + L +AD++ LQE+ S + + Sbjct: 6 VATLNLYHFAAPGIFWHARKPTATYSQAEWDAKKNWIITLLSEMNADVIGLQEVVSQDEL 65 Query: 81 AKVFPKNTWCIFYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQ----QSYPLLGAKD 135 + N + FY + + + AIA R + P D Sbjct: 66 KALLAANGYPYFYCPVAPAFDADDPEIYVNATVAIASRYPFISAEPLSGVAGVPQDTVID 125 Query: 136 SFSRAGNRRAVELLVEING-KKIWVLDIHLKS-FCFLDS-----LENTYSPSCSLLSQQA 188 R +R V+ ++++ G + H KS F+D L + + ++A Sbjct: 126 EDFRF-SRTPVDAVIDLPGIGQTRFFVCHFKSQGAFVDDEIIDGLADWGDKIRTTYMERA 184 Query: 189 QWLKDWITQKKES----------------LVPFVIAGDFN-----RKINYLGNNDDFW 225 + + ++ P ++ GD N I+ L D W Sbjct: 185 MAGVNQVAKRAAEAGAIYRMFRQSIDADADAPVILLGDLNEDPASHTISILTQADRVW 242 >gi|330957166|gb|EGH57426.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 291 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 80/287 (27%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----------Y 77 SW L G + + +D+ D+V LQE+ Sbjct: 58 SW--QHLLPHGGRAGNLQKIGDLINDF------------DLVALQEVDGGSMRSGFVNQV 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN + R + ++ P Sbjct: 104 EHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLSRLRPTKIEDHPLPGPAG---- 152 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL L +I + Sbjct: 153 -----RGAILVRFGEGEDALIVVMMHLALGTRT-----------RTLQL------AYIRE 190 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N N L + L + ++ + R K + Sbjct: 191 LIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEATF---PSWRPKRCL 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 241 DHILLSP--------------TLTLERVQVLAQPISDHLPVAVEIRL 273 >gi|160878851|ref|YP_001557819.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] gi|160427517|gb|ABX41080.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] Length = 258 Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 95/258 (36%), Gaps = 55/258 (21%) Query: 65 DADIVFLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +ADIV QE A+ V + I ++D + +T +A +K+ Sbjct: 35 NADIVCFQE-----ALPHVVKWLKENLEDYYILSCGR------EKDLKGEQNT-VAFKKE 82 Query: 120 NVRVLQQS------YPLLGAKDSFSRAG-NRRAVELLVEI--NGKKIWVLDIHLKSFCFL 170 +++ + P + +++ R E+ ++ K ++L+ HL Sbjct: 83 KYQLISMNTFWLSLTPDVPGTRYENQSMCPRSVTEVFLQDLETEKLYYLLNTHL------ 136 Query: 171 DSLENTYSPSCSLLSQQ--AQWLKDWITQKKESL---VPFVIAGDFNRKINYLGNNDDFW 225 ++ S + +L Q + + QKK++ V ++ GDFN N + Sbjct: 137 ---DHEGSEA-RVLGMQQILKHMSGVAEQKKQAGFGKVEMILTGDFN-----GYPNSEEI 187 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 I ++ L + + ++ IDY V+ E+ + ++ Sbjct: 188 SLIAKSEFLRDLTSGMEGTFHDFGRMQPAEKIDYIVVSSGLKCCT-----RELWTDCEN- 241 Query: 286 KSRGKRLSDHCPISIDYD 303 G LSDH P+S+ + Sbjct: 242 ---GVFLSDHYPVSVVLE 256 >gi|326929304|ref|XP_003210807.1| PREDICTED: deoxyribonuclease-1-like 2-like [Meleagris gallopavo] Length = 278 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 97/298 (32%), Gaps = 51/298 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--G 75 +R+ ++NI + SV ++LR+Y D+V +QE+ Sbjct: 17 CPATATLRIGAFNIQ---AFGDSKMSDESV--AGVIISILRRY------DVVLVQEVRDS 65 Query: 76 SYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +AV ++ + + S RD+ +++ + + + +V + +Y Sbjct: 66 DLSAVTELLEQLNSVSSSLYDYEISG-----PLGRDNYKEMY--LFIYRTDVVSVVDTYQ 118 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-IHLKSFCFLDSLENTYSPSCSLLSQ-Q 187 +D FSR + + + + +V+ +H S + L Sbjct: 119 YEDQQDVFSREP--FVLRVSAPHSKAEEFVMVPLH--------SAPHDAVAEIDALYDVY 168 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W V GDFN +Y+ +D + +D + Sbjct: 169 LAVVNKW------GTDNIVFLGDFNADCSYVKQSDWASIRLRSSDVFKWLIPDSADTTVG 222 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + D V+ + ++ S + + + + L SDH P+ + Sbjct: 223 KSDCAY----DRIVVCGAKLKRSIVPNSATVYNFQHAFQLEQEEALAVSDHYPVEVKL 276 >gi|296103284|ref|YP_003613430.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057743|gb|ADF62481.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 253 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 80/256 (31%), Gaps = 43/256 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDSNNDI 110 LR + + ADIV LQE+ + V + +P F + +++ + + Sbjct: 33 LRDAVRTVSADIVCLQEVMGAHEVHPMHFENWPDTPHYEFLADTMWSDYAYGRNAVYPEG 92 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV + + + +S R + + V +HL Sbjct: 93 HHGNAVLSRYP-IEHYENRDVSVGESEKRGLLY--CRIAPPDLDFPVHVGCVHL------ 143 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L + + Q Q L +W P VIAGDFN D Sbjct: 144 -GLREAHRQA------QLQMLAEWTNAL-PEGEPVVIAGDFN---------DW---RQRA 183 Query: 231 NDSLI--RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 N L +E +R + + +D+ K S + + Sbjct: 184 NHPLKVEAGLEEIFTRAHGRPARTFPVRFPLLRLDRIYVKNAHASSPTAL------ALLN 237 Query: 289 GKRLSDHCPISIDYDF 304 + LSDH P+S + Sbjct: 238 WRHLSDHAPLSAEIHL 253 >gi|265752690|ref|ZP_06088259.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA] gi|263235876|gb|EEZ21371.1| metallophosphoesterase [Bacteroides sp. 3_1_33FAA] Length = 247 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 12/74 (16%) Query: 4 KYVLALVFFLVPCTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK 62 K L L+F L+ ++ +Q +RL+++NI + + V D+ + Sbjct: 2 KKTLPLLFILLFALSAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVIN 50 Query: 63 NLDADIVFLQEMGS 76 ++ ++V LQE+ S Sbjct: 51 HIHPEVVALQELDS 64 >gi|332991677|gb|AEF01732.1| Endonuclease/exonuclease/phosphatase [Alteromonas sp. SN2] Length = 242 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 55/261 (21%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMG---SYNAVAK----VFPKNTWCIFYSTERLINHSKR 104 +Y + Q+ ADIV LQEM S A+ + + KN + + S L S Sbjct: 19 QNYHRIGQFLAESGADIVLLQEMDTRPSERAIERDIEDICAKNVYNLV-SAPALHEPSG- 76 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 A+ + + Q+++ + S R ++++ + + V++ H Sbjct: 77 ------WYGNAILSRFNVIEQETFDV-----SQQGRQPRNVQVVVLQTDKGPLTVVNTH- 124 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDD 223 L+ S Q L D++ Q+ + +P V+AGDFN + Sbjct: 125 ------KGLKRLERRS------QFALLHDYLEQRMQAHPMPLVLAGDFN---------EW 163 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + + K ++ +D + + + ++ + Sbjct: 164 QFFSRAFTSLNKLLNQHKVGATFPSQFPIFS--LDRVWVSDD----ITVSECKKLTSKKA 217 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + SDH P+ +D Sbjct: 218 SVF------SDHLPVQLDIRL 232 >gi|320162825|gb|EFW39724.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 284 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 91/302 (30%), Gaps = 58/302 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSY--- 77 ++R+++WNI+ L + + + L + DADI+ LQE + S Sbjct: 3 RLRILTWNISGLDISDASPPGETIATK----LERLAFGMLDHDADILCLQEFPVPSDSRM 58 Query: 78 -------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +++K+F + W S S I V++ + L+ + Sbjct: 59 PAHQKTFESLSKLFRELGWEFVNSAPSHCGWSC----------ILVKQPWLERLELASTA 108 Query: 131 LGAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 A + + A + I V HL F S + Sbjct: 109 GPAVFATFKVPRDDASGFGSSDDNAASSPPTITVASCHLAPFKTGTSQRSA--------- 159 Query: 186 QQAQWLKDWITQKKESLVP---FVIAGDFNRK------INYLGNNDDF--WKTIDPNDSL 234 Q Q L I + + VIAGDFN + + G D F + ++P + Sbjct: 160 -QFQALAQAIKASQSTRSATNSIVIAGDFNARENENEHFAHDGYVDAFSAYCLLNPKERS 218 Query: 235 IR-FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 F + D V + S I + LS Sbjct: 219 QLQFTWDSTKNKYHADGFGFTCRFDRIVTKRAKVT-----SLKMIGNSPCVEADSSFYLS 273 Query: 294 DH 295 DH Sbjct: 274 DH 275 >gi|149199822|ref|ZP_01876852.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] gi|149137110|gb|EDM25533.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] Length = 271 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 106/284 (37%), Gaps = 46/284 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA---DIVFLQEMGSYNAV 80 +RL ++N L+ G SL ++ R + L+ A+ + A D++ LQE + Sbjct: 30 LRLSTFN---LAHGRGRSLSHFTLGRKKIEANLIAT-AQQIQASPVDLLALQEAEAEMTW 85 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K ++ + + + + AV K V +S+ +K +F + Sbjct: 86 HKNLHQSQFLAEQAGFSQVAQGEHVRGKRYSYGTAVLSKLKIVHSESHVFPRSKLTFPKG 145 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 ++ K V+ +HL D L +Q Q L ++I + + Sbjct: 146 ---FVSAEVISHCQKHFRVISLHL------DFLHEKTR------QRQIQMLCNYI--QNQ 188 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 + +P +I GDFN + G + + ++ + P+EK + + +D+ Sbjct: 189 APLPLIIMGDFNCQYRKNGVLERLAQELNLQ---VWNPQEK-----IVSFPKLGLRLDWI 240 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ E+ +N ++ SDH + + +F Sbjct: 241 LIS------------QEMRFNSYELWDDLA--SDHLAVRAELEF 270 >gi|118346747|ref|XP_977048.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89288619|gb|EAR86607.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 1287 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 42/208 (20%) Query: 28 SWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK 86 +WN+N L E+ L + D I+ QE + Sbjct: 598 TWNLNAYLPEKTTHQLNPIFLHNQKQDIV------------IIAFQE---------LVEL 636 Query: 87 NTWCIFYSTERLINHSKRDSNNDIH---------TA----------IAVRKKNVRVLQQS 127 + ST + N ++ TA A + N R+ Sbjct: 637 KPQNLMMSTHQKHNSQNYWEQIILNNLGKGYFLVTAANLVGIQTYIFAKSEMNGRITNIQ 696 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + + + GN+ V + ++ I VL+ HL + S + C S Q Sbjct: 697 FDSV-KCGFVGQLGNKGGVAIRFNVDDTSIAVLNCHLPAGQSKVSDRISSLQQCIQYSFQ 755 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKI 215 + + + + ++ GD N +I Sbjct: 756 QEGMATYKKEPITKSDKLILMGDLNFRI 783 >gi|239942790|ref|ZP_04694727.1| hypothetical protein SrosN15_17486 [Streptomyces roseosporus NRRL 15998] gi|239989249|ref|ZP_04709913.1| hypothetical protein SrosN1_18253 [Streptomyces roseosporus NRRL 11379] gi|291446259|ref|ZP_06585649.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291349206|gb|EFE76110.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 294 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 79/261 (30%), Gaps = 62/261 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY----- 77 +R+ ++NI + R T++ L +AD++ LQE+ + Sbjct: 49 PLRVATYNI----HAGAGMDGAFDLDRQTAELRSL-------NADVIGLQEVDRHWGSRS 97 Query: 78 -------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSY 128 ++ ++ YS + R +AV R + VR Sbjct: 98 EWRDLAGELARRLRMYVSFAPIYSLDPAEPGGPRAE-----YGVAVLSRHRIVRAENHEI 152 Query: 129 PLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L +D E++V + G + V HL Y P ++ Q Sbjct: 153 TRLSTQDPNPVPAPAPGFGEVVVRVRGLPVHVYVTHL-----------DYRPDPAVRVAQ 201 Query: 188 AQWLKDWITQKKESLV---PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ P ++ GD N + W+ + D + Sbjct: 202 IA------DTRRIMAEDRGPKILLGDLNAEPAAPELA-PLWRELTDADP--------GAP 246 Query: 245 CNANKNLRNKIPIDYFVMDQN 265 ++ + ID+ + ++ Sbjct: 247 TFPAQDPVKR--IDFVAVSKD 265 >gi|194219348|ref|XP_001498739.2| PREDICTED: similar to Deoxyribonuclease I-like 2 precursor (DNase I-like 2) (DNase I homolog protein DHP1) [Equus caballus] Length = 302 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ D + ++ + Sbjct: 192 LDVIDKW------GTDDILFLGDFNADCSYVREEDWAAIRLRSSEVFKWLIPDSADTTVG 245 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V+ + L +S + + E+ + + L SDH P+ + Sbjct: 246 NSDCAY----DRIVVCGARLRRSLKPQSAAVHDFQEEFGLDQTQALAISDHFPVEVTL 299 >gi|159487062|ref|XP_001701554.1| predicted protein [Chlamydomonas reinhardtii] gi|158271495|gb|EDO97312.1| predicted protein [Chlamydomonas reinhardtii] Length = 1288 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 96/336 (28%), Gaps = 72/336 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN--LDADIVFLQEMGS---- 76 V + S N+ LS + S + + DI+ + E+ Sbjct: 908 TVTIGSLNVENLSPADPPSK-----------FARIADAVVKGLRSPDILGVAEVQDNNGP 956 Query: 77 ---------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI------HTAIA 115 +A+ ++ + N +I + A+A Sbjct: 957 TDTGVVAADVTLGLLISAIQAAGGPTY--VYLQINPVNNLDGGQPGGNIRQVLLYNPAVA 1014 Query: 116 VRKKNV----------RVLQQSYPLL----GAKDSFSRA--GNRRAVELLVEINGKKIWV 159 P L G D + A +R+ + + + +NG+ ++V Sbjct: 1015 TPANLPAGGSTDANAVISTATGQPQLKYSPGRLDPTNPAFQSSRKPLAVQLTVNGQPLFV 1074 Query: 160 LDIHLKS-----FCFLDSLENTYSP-----SCSLLSQQAQWLKDWITQ--KKESLVPFVI 207 + HL S C D + S +QQA L +++Q E V+ Sbjct: 1075 IVNHLNSKASLPSCGGDQPLFGRNQPPARSSEVQRAQQASILAGFVSQILALEEQSRVVV 1134 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQ 264 GD N + + L + N + + +D+ ++ Sbjct: 1135 MGDLNDFAGSSALGVLYASGLTNAYLLPEQSGLLRTPPNQRYSYNFEGNAQALDHILLSP 1194 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + DD + G R SDH P+ + Sbjct: 1195 SLVGGAEVGVLHVNSEFADD-AASGTRFSDHDPLMV 1229 >gi|29830170|ref|NP_824804.1| exodeoxyribonuclease [Streptomyces avermitilis MA-4680] gi|29607280|dbj|BAC71339.1| putative exodeoxyribonuclease [Streptomyces avermitilis MA-4680] Length = 287 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 86/309 (27%), Gaps = 65/309 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 A + + S N+N L + + AD++ LQE+ Sbjct: 19 AGVLTVTSVNVNGLRAAAKKGFVE---------------WLAETSADVLCLQEVRAEPDQ 63 Query: 79 AVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAI--AVRKKNVRVLQQSYPLL 131 A V + W + ++ + R + + A R ++ P + Sbjct: 64 LPAGVRAPDGWHVVHAPAAAKGRAGVSLYTRREPDRVRVGFGSAEFDGGGRYVEADLPGV 123 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLD---IHLKSFCFLDSLENTYSPSCS--LLSQ 186 + +G E+ E +K + HLK + + C ++ Sbjct: 124 TVASLYLPSG-----EVGTERQDEKYRFMGEFLTHLKDLRERAAADGREVLVCGDWNIAH 178 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-- 244 Q LK+W +K + F + + + P D Sbjct: 179 QEADLKNWRGNRKNAG--------F-----LPEEREWLGRVLSPEDGGYVDVMRALHPDV 225 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + + +R SDH Sbjct: 226 EGPYSWWSYRGRAFDNDSGWRIDYEVATPGLAAKAVKG-------FVERAATHEERWSDH 278 Query: 296 CPISIDYDF 304 P+++ YD Sbjct: 279 APVTVVYDL 287 >gi|327312703|ref|YP_004328140.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944135|gb|AEA20020.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 366 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 59/265 (22%) Query: 59 QYAKNLDADIVFLQEM-GSYNAVAKVFP-----------------KNTWCIFYSTERLI- 99 Y ADIV LQE S +++P + S ++ Sbjct: 126 DYILKSKADIVCLQEAQASMEGTDRIYPALKKHYPYFRLMVKKKPGADHMVLLSRYPVLW 185 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + SN++ A V K + L + L + + + + + Sbjct: 186 QDSIPYGSNSNQSVAYMVDIKGTKTLVVNNH-LESNGLSTDDKEEFKTLVKGNMGTGEAK 244 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RKINY 217 HL + + QA+ + ++ + + VP ++ GDFN ++Y Sbjct: 245 DESFHL----LRKLGSVSVRRA-----PQAEAVARYVRKYLDRKVPVILCGDFNDSPLSY 295 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQE 273 + N +K ID+ + Sbjct: 296 THR-----------TIARELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDDFE------ 338 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPI 298 Y S SDH PI Sbjct: 339 -----PYGAKVDNSVTA--SDHYPI 356 >gi|229095084|ref|ZP_04226080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|229101186|ref|ZP_04231952.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|229114038|ref|ZP_04243464.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228669497|gb|EEL24913.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228682314|gb|EEL36425.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228688414|gb|EEL42296.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 263 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHTIIKEDTFFISENKDTTYWKTRKIVSATIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN- 221 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FQGQVDRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANK----NLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + + + K++ + ++ + ID V +Q+ + F+ Sbjct: 186 EYLMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIVCNQSKRVRSSKVIFN- 244 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 + +SDH + + D Sbjct: 245 --------GTNRNVISDHFGVEVQLD 262 >gi|283456551|ref|YP_003361115.1| endonuclease/CDSuclease/phosphatase [Bifidobacterium dentium Bd1] gi|283103185|gb|ADB10291.1| Endonuclease/CDSuclease/phosphatase [Bifidobacterium dentium Bd1] Length = 333 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 58/269 (21%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIF 92 ++ L +V + +D + K+ +++ LQE +A+ + + Sbjct: 105 TDDGYARLMTCNVYKGRADAQEIVDLVKSEHVEVLALQETTDDFVDALNRA-GIADY--- 160 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 + +S+ S++ ++ N D S A + Sbjct: 161 ------LPYSQVSSSDGVY-------GNGLWSATPLGDPADDDVDSSASFMPGGTVSFNG 207 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDF 211 + + +H S QQ + L + K + ++ GDF Sbjct: 208 GTTPVRFVSVHTTS-------PTRSR------WQQWRRSLDELARMKFNTDTRYIFMGDF 254 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIP--IDYFVMDQNA 266 N ++ D + I ++ ID+ V+D Sbjct: 255 NATYDHTPFRDFL------GNRFIDASRQAAGGFVFSWPADIDYVPTFAGIDHIVLDSGM 308 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +KS SDH Sbjct: 309 LA--------------GQVKSEKIDGSDH 323 >gi|12862077|dbj|BAB32346.1| unnamed protein product [Mus musculus] Length = 385 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 100/331 (30%), Gaps = 82/331 (24%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQETKVTRDVLT 56 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRV---LQQSYPLLGAKD 135 + F + +S + D T +A + V L G D Sbjct: 57 EPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMD 116 Query: 136 SFSRAGNRR----AVEL-------LVEINGKKIWVLDIHLKSFCFLDSLENTYS-----P 179 F++ R L +E K + +++++ C Sbjct: 117 EFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVY----CPHADPXKPERLTFKMR 172 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGN-----------NDDFW 225 LL +A+ L + +I GD N R I++ Sbjct: 173 FYRLLQMRAEPL-------LAAGSHVIILGDLNTAHRPIDHCDASSLECFEXDPGRKWMD 225 Query: 226 KTIDPNDS-------------LIRFPKEKDS-RCN----ANKNLRNKIPIDYFVMDQNAY 267 + PK++ + C ++L +DY + D+ Sbjct: 226 GLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALV 285 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Q SF SDHCP+ Sbjct: 286 IDTFQASF----------LLPEVMGSDHCPV 306 >gi|91792122|ref|YP_561773.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91714124|gb|ABE54050.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 379 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 21 AQKVRLVSWNI-NTLSEQEGVSLWKNSVKRTT--SDYTLLRQYAKNLDADIVFLQEMGSY 77 A ++R+ S N+ N ++ + ++N + + + + AD+V QE+ S Sbjct: 6 ASQIRIASINLFNFIAPPDAYYDFENIYSQDQWAKKLAWFKAFFEENPADVVGFQEVFSP 65 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLG---- 132 + + + + F + A+A R V L P L Sbjct: 66 DELQSLMASLGYPHFAVLD-SAELIGDYVYKSPVVALASRFPIVEMALVTPAPQLCQHIG 124 Query: 133 --AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF---------CFLDSLENTYSPSC 181 A SFSR R + L V +HLKS D + Sbjct: 125 VLADFSFSRKPLRATLAL---PQIGLCDVYVVHLKSKRSDLGQGSELVTDLNGGADLMAR 181 Query: 182 SLLSQQAQWLKDW----------ITQKKESLVPFVIAGDFNRKIN 216 L + A L+ + +++ S P ++ GDFN ++ Sbjct: 182 QALGRVASNLQRATEAALLFHQIMLRRQNSSQPVILLGDFNDSLS 226 >gi|76810233|ref|YP_334150.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|76579686|gb|ABA49161.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] Length = 322 Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 91/315 (28%), Gaps = 72/315 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +R+ +WN+N+L+ ++ + + D D++ LQ Sbjct: 54 MSASRIPPIPPMRIATWNVNSLNVRK----------------QHVLDWLAQSDVDVLCLQ 97 Query: 73 E--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E + + + + + +A+ + + S P Sbjct: 98 ELKIPDEKFPREALEAAGYR------------SWFAGQKTYNGVAI------LARASLPF 139 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + G A + L+ + ++ + + LDS + Y Q Sbjct: 140 DETDIVRNIPGFEDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDA 193 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFP-KEKDSRCNAN 248 L+ W+ + + + GD+N +D W+ + R + + + Sbjct: 194 LQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVD 253 Query: 249 KNLRNKIP---------------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 R + P ID+ ++ + + D + Sbjct: 254 AFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPR 306 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 307 TWEQPSDHTPVVAQL 321 >gi|213423707|ref|ZP_03356687.1| hypothetical protein Salmonentericaenterica_40228 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 206 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 31/157 (19%) Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + + + I V+ +HL L ++ + Q L W+ ES P ++ Sbjct: 81 ITPPMLNRPIHVMCVHL-------GLRESHRQA------QLTMLAGWVNALPES-EPVLV 126 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 AGDFN D K P ++ + + +P+ +D+ Sbjct: 127 AGDFN---------DWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYV 175 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K S + + LSDH P+S + Sbjct: 176 KNANASSPGALP------LRNWRHLSDHAPLSAEIHL 206 >gi|15597352|ref|NP_250846.1| hypothetical protein PA2156 [Pseudomonas aeruginosa PAO1] gi|9948174|gb|AAG05544.1|AE004642_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 245 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 84/251 (33%), Gaps = 43/251 (17%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAKVF--PKNTWCIFY-STERLINHSKRDSNNDI 110 LR+ +++ AD+VFLQE+ S +A P + S + + + Sbjct: 29 LREAVRSVGADLVFLQEVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVYPEG 88 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV K+ +L + + R +++ G+ + + +HL Sbjct: 89 HHGNAVLSKHP-ILAHRNLDVSVAGNEERGLLHAVIDI-----GRPLHAVCVHL--GLRE 140 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + C L + +++ P V+AGDFN ++ D Sbjct: 141 AQRQRQLQLLC--------ELVAGLPERE----PVVVAGDFN---DWRQRADRLLAGCG- 184 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ ++ + P+ +D+ + + + Sbjct: 185 -----LREVFVGAQGRPARSFPARWPV--LPLDRIYLRNARGRQPRILS------RRPWS 231 Query: 291 RLSDHCPISID 301 LSDH P++++ Sbjct: 232 HLSDHLPLAVE 242 >gi|241841265|ref|XP_002415328.1| conserved hypothetical protein [Ixodes scapularis] gi|215509540|gb|EEC18993.1| conserved hypothetical protein [Ixodes scapularis] Length = 284 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 59/294 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 ++LVSWNI+ L+++E + RT S L L+ D+VFLQE+ Sbjct: 26 AHPGSPTALKLVSWNIDGLNDKEIQA-------RTLSICNALNG----LEPDVVFLQEV- 73 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV----RKKNVRVLQQSYPLL 131 P I ++ ++ + +D AV + + P Sbjct: 74 --------VPS----IVGVVKKHLSRYRYIPGDDKGY-FAVTLINKNSVKYISHSVVP-- 118 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-SLLSQQAQW 190 S +R V + NG + +++ HL+S + + + C Sbjct: 119 ----FTSTQMDRHIVCVEATFNGFPLVLMNTHLESMAYSSQVRSIQLRKCFRKCM----- 169 Query: 191 LKDWITQKKESLVPFVIAGDFNRK----INYLGNNDDFWKTID--PNDSLIRFPKEKDSR 244 K+ S + GD N + + G D + + + R + Sbjct: 170 -------KEPSDRTVIFGGDLNLRDSEVASVGGVPDGMFDVWEACGSSPATRHTWDMSVN 222 Query: 245 CN---ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 N + + K D + + L+ SF +L ++ ++ G SDH Sbjct: 223 DNLDFGGEQAKPKCRFDRVYVRPSQPPGLVPASF--LLTGKERLRPGGCFPSDH 274 >gi|298386065|ref|ZP_06995622.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298261293|gb|EFI04160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 361 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 83/261 (31%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE S + + E + K IH R Sbjct: 125 SYLADSEADIICLQEYNS----------TKNKKYLTDEDIRKALKAYPYRSIHN--PERG 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--------CFL 170 + +P+L A+ + +++ +++N I +++ HL+S + Sbjct: 173 GSQLACFSKFPILSARPIKYESTYNGSMQYTLKVNEDTITLINNHLESNKLTKEDKVIYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIA------------GDFNRKINY 217 D +++ + L Q + L + + +A GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSKYPTIITCGDFN-DASI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQQLDD-----AFTQSGRGLGISYNLNKFYFRIDNILISPNQKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKDSDHYPI 354 >gi|171060686|ref|YP_001793035.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] gi|170778131|gb|ACB36270.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] Length = 276 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 95/295 (32%), Gaps = 58/295 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 ++R+ ++NI +GV KR L + LDAD+V LQE+ Sbjct: 26 GSRLRVATYNI-----HKGVRGM-GPQKRLE--IHNLGMGVQALDADLVCLQEV------ 71 Query: 81 AKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR---------KKNVRVLQQSYPL 130 ++F + ++ + + A R N + + Sbjct: 72 -RLFHHGDANRFDHTHFGWPKQGQAEFLAPEGYESAYRTNAVTRGGEHGNALLSRWPLGD 130 Query: 131 LGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +G D R R + +V+ +G + + H F + QA+ Sbjct: 131 VGHHDVSDHRFEQRGLLHTMVQWHGVTVHTIVAH-----FGLIHASRVR--------QAE 177 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D+I K V+AGDFN D + +DP + Sbjct: 178 RLGDYIDAKIPRGALVVVAGDFN---------DWG-ERLDPIIGAAGLQRAAPPDARRGP 227 Query: 250 NLRNKIPIDYFVMDQN-AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 L + F +D+ ++F + R+SDH P+ ++ + Sbjct: 228 -LTFPSRMPLFALDRVYTRGLRCADTFVPR-------GAAWARMSDHLPLVVELE 274 >gi|160876625|ref|YP_001555941.1| endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|160862147|gb|ABX50681.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS195] gi|315268822|gb|ADT95675.1| Endonuclease/exonuclease/phosphatase [Shewanella baltica OS678] Length = 398 Score = 43.5 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 49/204 (24%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L ++ + DIV QE+ S + ++ + ++ A+A Sbjct: 66 LSEFLAHRQPDIVGFQEVFSPEPLKRI-ASEQGLVHFAVIDAPTLISDYIYRSPVVALAS 124 Query: 117 RKKNVRVLQQSYPL-------LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--- 166 R V + L ++ +FSR R VE+ + K +H KS Sbjct: 125 RYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEV---PHIGKCDFYVVHFKSKRA 181 Query: 167 FCFLDSLENTYSP----------------SCSLLSQQAQWLKDWITQ------------- 197 L+ + P LL++Q L W + Sbjct: 182 GLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQ--ALGRWASTMQRGAEAALLFNG 239 Query: 198 ----KKESLVPFVIAGDFNRKINY 217 ++ES P ++ GDFN + Sbjct: 240 ILVRRQESKHPVIVMGDFNDSLTM 263 >gi|241626053|ref|XP_002409605.1| conserved hypothetical protein [Ixodes scapularis] gi|215503194|gb|EEC12688.1| conserved hypothetical protein [Ixodes scapularis] Length = 383 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 96/293 (32%), Gaps = 56/293 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P ++ ++WNI+ KN + RT + + ++ D+VFLQE+ Sbjct: 125 PSVEQDPGTLKFITWNID-------GIDDKNLLLRTKA----VCSIIESSGIDVVFLQEV 173 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 S + + P + + + N + TA +RK V+ Sbjct: 174 VPTSVKVMEQSLPG--YKLL-----VGNTVEY------FTATLLRKSRVKYESHEVYPFS 220 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + A R + N + +L+ HL+S C L+ Sbjct: 221 -----NTAMGRNVTYVKASFNKWPLTLLNTHLESTAEFAEPRKVQLRRC---------LR 266 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGN-------NDDFWKTIDPNDSLIRFPKEKDSRC 245 I + E V F GD N + + L + +D W++ R+ + Sbjct: 267 KCIKEPAERSVIFA--GDLNLRDSELDDLGGLPHGFEDVWESCGQRKEA-RYTWDMTRND 323 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY---NEDDIKSRGKRLSDH 295 N N R K + D+ +K S + + + +K SDH Sbjct: 324 NVTWNGRFKPRCRF---DRVYFKHSKPTSLKPVFFGLIGLERLKPHRCFPSDH 373 >gi|125585545|gb|EAZ26209.1| hypothetical protein OsJ_10076 [Oryza sativa Japonica Group] Length = 436 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 86/318 (27%), Gaps = 48/318 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 ++ ++ +WN+ ++ + + L R + D ++ QE+ Sbjct: 80 ASNKTLKYRLFASTWNVGGVAPPDDLDLSDWLDTRNAA-----------YDIYVLGFQEV 128 Query: 75 GSYNAVAKVFPKNTWCIFY------------STERLINHSKRDSNNDIHTA--------- 113 + V + + S+ N S+ Sbjct: 129 V-PLSARNVLGADKKRVGMRWNELVRAALNRSSPSAPNSSRDQREAKGTGCGAAAAAPGG 187 Query: 114 --IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 I + + +V + + G + R V + ++ V HL S Sbjct: 188 GEIKQQAAHQKVHRVRGGIGGVCGELACRDYRAPVSVRFWLHDTSFCVACCHLASGGRDG 247 Query: 172 SLENTYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + + + + +LS+ + L + QK ++ GD N +I+ Sbjct: 248 DVAHRNADATEILSRTTFPRGHSLN--LPQKILDHDRVILLGDLNYRISLPEAKTSCEAQ 305 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ-------NAYKFLIQESFSEILY 280 ++ E + Y A + + + Sbjct: 306 VESEGGAFHGWNEGAIAFSPTYKYYPNSDTYYGCASHGRKGEKRRAPAWCDRILWRGAGL 365 Query: 281 NEDDIKSRGKRLSDHCPI 298 + RLSDH P+ Sbjct: 366 KQKRYDRCESRLSDHRPV 383 >gi|228476525|ref|ZP_04061215.1| metal-dependent hydrolase [Streptococcus salivarius SK126] gi|228251946|gb|EEK10992.1| metal-dependent hydrolase [Streptococcus salivarius SK126] Length = 303 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 73/242 (30%), Gaps = 51/242 (21%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ + V + S + Sbjct: 52 FQTLKEQILKAQYDIICFQEVNQEIETSVVDTDAYYHALPSATPIHQDHFVRLLVEKLAE 111 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 112 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 169 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V +HL + D Q ++W I ++ K P ++A Sbjct: 170 VDGREVAVASVHLS---WWDKG------------FQ----EEWARIEERFKAIGKPLILA 210 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMD 263 GDFN G+ +++ DS + S + K + IDY Sbjct: 211 GDFNNPAGREGHQAILASSLNLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDYVFAS 270 Query: 264 QN 265 Q+ Sbjct: 271 QD 272 >gi|26354044|dbj|BAC40652.1| unnamed protein product [Mus musculus] gi|123223480|emb|CAM21422.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 523 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 100/337 (29%), Gaps = 87/337 (25%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQET---KVTRD 53 Query: 83 VFPKNTWCIF--------------YSTERLINHSKRDSNNDIHTAIAVRKKNVRV---LQ 125 V + + YS + D T +A + V L Sbjct: 54 VLTEPLAIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLN 113 Query: 126 QSYPLLGAKDSFSRAGNRR----AVEL-------LVEINGKKIWVLDIHLKSFCFLDSLE 174 G D F++ R L +E K + +++++ C Sbjct: 114 GDIGCYGNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVY----C---PHA 166 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGN---------- 220 + P + + L+ + +I GD N R I++ Sbjct: 167 DPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDP 226 Query: 221 -NDDFWKTIDPNDS-------------LIRFPKEKDS-RCN----ANKNLRNKIPIDYFV 261 + PK++ + C ++L +DY + Sbjct: 227 GRKWMDGLLSNPGDEAGPHIGLFMDSYRYLHPKQQRAFTCWSVVSGARHLNYGSRLDYVL 286 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 D+ Q SF SDHCP+ Sbjct: 287 GDRALVIDTFQASF----------LLPEVMGSDHCPV 313 >gi|312884747|ref|ZP_07744448.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367660|gb|EFP95211.1| hypothetical protein VIBC2010_19580 [Vibrio caribbenthicus ATCC BAA-2122] Length = 861 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 111/379 (29%), Gaps = 105/379 (27%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-------LDADIVFLQEMG 75 +R+ ++N +N + G + R + + LDADIV L E+ Sbjct: 468 LRVATFNVLNYFNSPYGGDQNLDGSNRGAKSFEEFERQQTKIVEALYKLDADIVGLMEIE 527 Query: 76 -----SYNAVAKVFP--KN-------TWCIFYSTERLINHSKRDSNNDIHT-AIAVRKKN 120 + A+A++ + T+ + + + + + D+ T + R + Sbjct: 528 NNGFGNNGAIAQLVDQLNDRVGFEQYTYVALDTNQDGLTNEEDFVGTDVITNGLIYRPRI 587 Query: 121 VRVLQQSYPLL------------GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF- 167 +L L G + + R A+ +++ +++ + HLKS Sbjct: 588 AELLSSKVIALPSQLAPPVYDEKGKQIEDGKNYQRNAIASTFKVHDEELTIAVNHLKSKG 647 Query: 168 --CFLDSLE----------NTYSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIAGDFNRK 214 C+ D+ SC A L + + + +I GD Sbjct: 648 STCWEDAASAEQGGQGREDKDKQGSCENFRVAAAVALGEALESIEGHK---IIVGD---- 700 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-------------------KNLRNKI 255 +N G D D N ++ + N +N Sbjct: 701 LNAYGMEDPVRVLTDLNGGSVKAARNTYIDGEPQFGDEGAVITKSYGYLNAVAINHQNSW 760 Query: 256 P---------IDYFVMDQNAYKFL--------------IQESFSEILYNED-----DIKS 287 +D+ +M + YK L++ D+ Sbjct: 761 SYSYNDEVGALDHILMSPSLYKKEGFLQQRRFVDATDWHINGGESKLFDYTDKFKGDLPK 820 Query: 288 RG--KRLSDHCPISIDYDF 304 R SDH P ++ + Sbjct: 821 YNDHFRASDHDPAVLELNM 839 >gi|163739028|ref|ZP_02146441.1| possible endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] gi|161387833|gb|EDQ12189.1| possible endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] Length = 400 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 104/335 (31%), Gaps = 85/335 (25%) Query: 25 RLVSWNINTL-SEQEGVSLWKNSVKRT---TSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + S+N+ L + +++ +D+ + LDADIV QE+ + Sbjct: 5 TIASFNVKNLIGPDQEYYKFQSYTPEEYAWKADW--MADQLLTLDADIVGFQEIFEEAPL 62 Query: 81 AKVFPKNTWCIFYSTERL-INHSKRDSNNDI-----HT-------AIAVRKKNVRVLQQS 127 ++ + + + SKR I +T A A + + + Sbjct: 63 REIIAETDRRGHEANAASLPDRSKRYHRKAIFRKLAYTPYTEAELAFAPNINDSKTPGKR 122 Query: 128 YPLLGAKDSFS---------------------------------RAGNRRAVELLVEING 154 P L + R +R ++ + + G Sbjct: 123 RPGLAILSRYGFAEPVEIIQDLPQPLDIPMACLGGEDDAGYYTLRRLSRPIMKARIPVAG 182 Query: 155 KKIWVLDIHLKS--FCFLDSLE------------NTYSPSCSLLSQQAQWL-KDWITQKK 199 + + V + HLKS F+ + + L + + + W+ ++ Sbjct: 183 QIVSVFNCHLKSKLGEFITPQGAPYPPETVLTAYDAGGRALGALRAALRRMAEAWVLRRM 242 Query: 200 -----ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS----LIRFPKEKDSRC---NA 247 E P ++ GDFN N + + + I + +A Sbjct: 243 ILDELEQNRPVMVLGDFNDGENAVSS-----EIISGETPFRNYSWMLRHDARHSGDRYSA 297 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 ++ + + ID F + +FL +S +++Y Sbjct: 298 EEDQQIRETIDKFQLRSAEKQFLK-KSLRDVVYTT 331 >gi|37676826|ref|NP_937222.1| putative phospholipase C precursor [Vibrio vulnificus YJ016] gi|37201370|dbj|BAC97192.1| putative phospholipase C precursor [Vibrio vulnificus YJ016] Length = 378 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 36/199 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q ++++++NI L ++ + +R + L+ Y K D++ LQE+ A Sbjct: 176 QHLKIMTYNIWAL-----PAIASHIDER----FELIPDYVKGY--DVLALQEVFANGRGA 224 Query: 80 VAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTA---IAVRKKNVRVLQQSYPLLGAKD 135 + K + + +I+ I R V Q +P D Sbjct: 225 FLRELAKEYPYQTKMLDK---------DGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTD 275 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 F+ G A + G+ V H + D+ + +Q + L Sbjct: 276 CFADKGVNYAEVIK---GGEAYHVFATH-TASYDTDTARDYRQRQ----FKQMRALAQ-- 325 Query: 196 TQKKESLVPFVIAGDFNRK 214 + K + V +GDFN Sbjct: 326 SLKIPANETVVYSGDFNVN 344 >gi|167743665|ref|ZP_02416439.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 14] gi|167899281|ref|ZP_02486682.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 7894] gi|167915957|ref|ZP_02503048.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 112] gi|167923801|ref|ZP_02510892.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei BCC215] gi|237509278|ref|ZP_04521993.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] gi|254184827|ref|ZP_04891416.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|184215419|gb|EDU12400.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|235001483|gb|EEP50907.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] Length = 624 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + + + +D+ + Y + + + Sbjct: 518 KTGAGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] Length = 301 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 97/316 (30%), Gaps = 50/316 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 K++++++N L + + + + + D DIV LQE+ + ++ Sbjct: 3 HKIKVMTFNTYLL----HIPFFSIGASTQDARINAMIKDNIFYDVDIVILQEVFNTHSAQ 58 Query: 82 KVFPK-------------NTWC----IFYSTERLINHSKRDSN--NDIHTAIAVRKKNVR 122 K+F + + + N K + + +++ IA+ + Sbjct: 59 KLFSGMRSLGFFYHTPVAAQYNESVLSYCDSNHCWNAKKGEWDMVQQVNSGIAIVSRYPI 118 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLENTYSP 179 V ++ A R + V ++EI GK + V+ HL+S FC + S + Sbjct: 119 VYREYQLFDDAGCGADRFSAKGGVRAVIEIEGKMLQVIGTHLQSDDNFCLMTSPSSHR-- 176 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDF----WKT---IDPN 231 Q L +W I GD N W +P Sbjct: 177 -----KAQLTQLINWAETSITEDRQITILGGDLNINYGSEEYEQALDIIGWGEPHHFNPR 231 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY---KFLIQESFSEILYNEDDIKSR 288 S + R +DY + + +S YN Sbjct: 232 PSWDFSTNNVIREAYPDT--RQSWHLDYIFAKNMRSIKQQTRVIKSKIGYNYNNKVFFDY 289 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ + + Sbjct: 290 ----SDHYPVVAEIEL 301 >gi|291223046|ref|XP_002731525.1| PREDICTED: angel-like [Saccoglossus kowalevskii] Length = 349 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 36/307 (11%) Query: 19 SVAQKVRLVSWNI--NTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R++ WN+ + L S + + +S+ T + L + D DI+ L+E+ Sbjct: 48 PQGPSIRIMQWNVLADALCQSRDDFIRSPPDSLLWQTRKFRSLEEI-LTYDPDIICLEEV 106 Query: 75 GSYNAVAK-VFPKNTWCIFYSTERLIN-HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 Y+ + + + + D N A+ ++ ++ P L Sbjct: 107 DHYHDFYNPMLQSIGYQGTFKPKPDSPCVYCLDHNGPDGCALFYKQDKFDMIDGITPNLT 166 Query: 133 AKDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 D + V ++ + GK + V HLK+ L + Sbjct: 167 IPDVTKGSRTTNQVAIIYTLRCRKKSFEGKSLVVGVTHLKAKNGWQELRHA--------- 217 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR- 244 Q + L + + K+ P V GDFN + + ++ ++ + + ++ Sbjct: 218 -QGKILLEHLN-KQSRGRPIVFCGDFNAESSEPVYSEFQNSNLNLKSTYQLLSENGNTEP 275 Query: 245 ----CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL---SDHCP 297 + K IDY ++ L ++ I + R SDH Sbjct: 276 EYTTWKIRPSGEAKHTIDYIWHSEDQ---LTIDALLPIPTDSQLGDERAPSYITSSDHFS 332 Query: 298 ISIDYDF 304 + D F Sbjct: 333 LVFDLRF 339 >gi|241166987|ref|XP_002409964.1| conserved hypothetical protein [Ixodes scapularis] gi|215494698|gb|EEC04339.1| conserved hypothetical protein [Ixodes scapularis] Length = 437 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 80/268 (29%), Gaps = 32/268 (11%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 S R T + Y + D D VFLQE+ S + I T + H+ Sbjct: 18 SKHREER-MTAIANYLSSSDLDFVFLQEIWSQR--------DYKRIRSKTRNNLPHAHYF 68 Query: 106 SNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL---LVEINGKKIWVL 160 + + + + + + Y L G F + V G I + Sbjct: 69 HSGVLGSGVCILSKSPIADTGMLKYNLNGYAHKFYHGDWFGGKVVGLCKVNHRGLLINLY 128 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 HL + C QA + ++ E+ ++AGDFN Sbjct: 129 VTHLHAEYNRQRDIYLSHRIC-----QAFEMSQYVKLTSETCDLAIVAGDFN-----TEP 178 Query: 221 NDDFWKTIDPNDSLIRFPKE--KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + I N L + C N + +++ + + Sbjct: 179 LDPPYNIILHNTCLEDAFDSLCVGATCGHPDNHYTSAYDKHTCPTGKRIDYVMFKVGRGV 238 Query: 279 LYNEDDIKSRGKR------LSDHCPISI 300 + N K+ + LSDH P+ + Sbjct: 239 VANCKVCKNPRLKTTSGLPLSDHEPVEV 266 >gi|312384136|gb|EFR28938.1| hypothetical protein AND_02511 [Anopheles darlingi] Length = 570 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 106/331 (32%), Gaps = 65/331 (19%) Query: 17 TASVAQKVRLVSWNI-----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 + + ++ +V+WN+ +S + + L + D + L + ++ L Sbjct: 21 HSHTSHRIYVVTWNVSTKFPENISLHKLLGLENSP----DQD-SHLPDFF------VIGL 69 Query: 72 QEMGSY--NAVAKVFPKNTW-----CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 QE+ + N + +F + W I + ++ +++ + A RK + + Sbjct: 70 QEVNAQPQNTLYNLFKDDLWTQKFKDILKERDYVVIKTEQMQGLLLSV-FARRKHLLHLR 128 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q GN+ AV + + I G I +++ HL + LE + ++ Sbjct: 129 QVE-TEYTRTGLGGIWGNKGAVSIRMNIYGSSICLVNAHLAA--HDHMLEERINDYERIV 185 Query: 185 SQQAQWLKDWITQKKESLVPFVI-AGDFNRKIN--------------------YLGNNDD 223 +Q +K ++ +V GD N ++ L D Sbjct: 186 QEQKFHVKA---KETIFDHDYVFWFGDLNFRLTGEATTSPDEIRAMVARDELKQLIERDQ 242 Query: 224 F---------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE- 273 ++ + + + N R D + N + Sbjct: 243 LLLVRREGRAFQKLQERLPQFPPTFKFEHGSNEYDMKRRPAWTDRILYAVNENNYRNVRL 302 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + Y +SDH P++ ++ Sbjct: 303 TVEQTSYKSH----PSYNISDHKPVTSEFTL 329 >gi|256078810|ref|XP_002575687.1| hypothetical protein [Schistosoma mansoni] gi|238660930|emb|CAZ31920.1| expressed protein [Schistosoma mansoni] Length = 425 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 96/325 (29%), Gaps = 53/325 (16%) Query: 14 VPCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 +P +S+ + +R+ SWN+N LS+ E + ++ ++ L Sbjct: 119 LPRISSIERHIRIGSWNLNRFNLSKAEHPGFMEVVCLT-----------ILRMNVSLILL 167 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLI-----------------NHSKRDSNNDIHTAI 114 QE+ + + + + +R + + + Sbjct: 168 QEVSDPSVADYLCNELNYPSLPHIKRWVEKFPLSIPPYWKASCSIQPTGSMFRAKEYAVF 227 Query: 115 ------AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +R +L++S L ++ R I + ++ +HLK+ Sbjct: 228 LYNSRCGIRISRTSLLEKSSNSLS---VSRKSFTRSPCGASCHIQHVNLVLISVHLKASG 284 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDF 224 +S L +L + + S +IAGDFN + + + Sbjct: 285 LRNSQIGRTISEIESLG----YLVQAFYETQPSGTYLIIAGDFNLSSTHEAYRVLHEHGL 340 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE-----SFSEIL 279 W + + S + + + + ++ ++ L Sbjct: 341 WPVLKGEQQTTTNHCKSGSN-HLRAYDNAWLSANLSLTSESTIRWTGDSGVILKGLRHPL 399 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 E+ +SDH PI D Sbjct: 400 IPEETGSGANGLVSDHAPIWFDIHL 424 >gi|119713777|gb|ABL97825.1| hypothetical protein ALOHA_HF1049E08.0013 [uncultured marine bacterium HF10_49E08] Length = 255 Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 88/253 (34%), Gaps = 40/253 (15%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-IAVRKK 119 +N D++ LQE+ + + + + R+ + K Sbjct: 28 IQNFGPDLLGLQEVWHMQEEYLKEQLSNYAYYGRSRRMEPVEGEQCAVMYRKDRFEIVKG 87 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHLKSFCFLDSLENT 176 L ++ P + S+ + R A +L++ N ++I++++ H F + Sbjct: 88 ETFWLSET-PEVIESKSWDSSLPRIANWILLKDKKNNKQEIFLINTH-----FDHKGRES 141 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-DSLI 235 + LL ++ Q L + V ++ GDFN + ++D + +D Sbjct: 142 RKQAARLLKKRIQEL--------KGNVRVIVTGDFNAR----EDSDPYLGLVDGKILDTY 189 Query: 236 RFPKEKDS------RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 R + + + N+ ID+ L +F + N D + G Sbjct: 190 RMAHKSRTEEESTLSGWNGRTSGNR--IDWV---------LCTRNFRVLSANIDRSEFGG 238 Query: 290 KRLSDHCPISIDY 302 + SDH P++ Sbjct: 239 RYPSDHYPVTATL 251 >gi|242280566|ref|YP_002992695.1| endonuclease/exonuclease/phosphatase [Desulfovibrio salexigens DSM 2638] gi|242123460|gb|ACS81156.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio salexigens DSM 2638] Length = 349 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 13/65 (20%) Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + VE+ GK++ + ++HL C + QA++L +WI ++ V +++ Sbjct: 201 VEVEVAGKRVGIYNVHL---CVWNRAARVA---------QAEYLTEWIN-RESRDVDYLV 247 Query: 208 AGDFN 212 GDFN Sbjct: 248 GGDFN 252 >gi|152974192|ref|YP_001373709.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022944|gb|ABS20714.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 263 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 83/264 (31%), Gaps = 35/264 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC----IFYSTERLINHSKR----- 104 L + + + D++ LQE+ V+ I + + + Sbjct: 20 IKYLAKTIQEENYDVIALQEVSQSIKAQSVYGNKKKDNFGLILLAELKQLGLENYSMVWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 DI+ A+ K+ + + S+ + +KD+ R+ V + GK I Sbjct: 80 FAHIGYDIYEEGSAIITKHPIIKRGSFFVSESKDTTY-WKTRKIVYATIFYQGKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E +Q + + + GDFN + G Sbjct: 139 CHL--GWWNDEEE--------PFREQVNR----FMEHIDDHELSFLMGDFNNNAHLRGEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D+ + D+ ++ + K QN L+ + +++ Sbjct: 185 YDYMIQNNFYDTYALAMEKDEGTTVQGKIAGWDEN------KQNLRIDLVLSNKPVKVFS 238 Query: 282 EDDIKSRGKR--LSDHCPISIDYD 303 I + R +SDH + + + Sbjct: 239 SKVIFNGMNRKIISDHFGVEVQLN 262 >gi|284030291|ref|YP_003380222.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809584|gb|ADB31423.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 254 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 46/290 (15%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A VR+++WN+ V R + LR + D+V +QE Sbjct: 2 SATTVRVMTWNLWW-------RFGPQWVDRQEAILATLRA----VGPDVVAVQE----AW 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKD 135 +V + +++ R + L P+ K Sbjct: 47 PEQVETLAE-QLGMHCRYAGPSYPPETDIA-------RGDDPVSLGMGLLSRWPIADWKV 98 Query: 136 SFSRAGNRR--AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 A +R+ V ++ ++ ++ + H+ + C T Q + L + Sbjct: 99 RTMPARHRQLEPVAVVASLDHPQVTL---HVVTSCLEYEPAFTDDR-----IAQTRLLAE 150 Query: 194 -WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 + P ++AGD N + + + P S A +LR Sbjct: 151 LATDPAYDGDAPVIVAGDLNAGPTSRVLG-PLYDVLRDAWTGD--PDAITSPDEAGPDLR 207 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID+ + ++ + +++ + D G SDH + D Sbjct: 208 -DQRIDHIFYRPGTFSQEVEVTQAQLAGDPVD----GITPSDHQAVVCDL 252 >gi|326789876|ref|YP_004307697.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326540640|gb|ADZ82499.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 263 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 36/231 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK----NTWCIFYST---ERLINHSKRDS 106 L + K D D++ LQE+ S + + K F + + + + +NH + Sbjct: 20 INYLAKTIKENDYDVIALQEV-SQHMLGKQFKGQLKTDNYVVVLQEALQKLGVNHYEVVW 78 Query: 107 NNDIHTAIAVRK-------KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + H V + K+ + ++S+ + KD+ +RR V+ + G++I Sbjct: 79 DFA-HIGFQVYEEGLCLLSKHPIIEEESFFVSQTKDTL-NWKSRRIVKATINYKGEEIDC 136 Query: 160 LDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + D E Q L + K+ + + GDFN N Sbjct: 137 YSCHL--GWWEDEEEPA--------KLQLNKLNAKLHPKRRA----FLLGDFNNNANVRD 182 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI-----PIDYFVMDQN 265 D+ + D+ + + + K + +DY +Q Sbjct: 183 KGYDYMLGLGWKDTYMLAKDKDNGVTVQGKIHGWEENAGGLRLDYIFTNQK 233 >gi|294782305|ref|ZP_06747631.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium sp. 1_1_41FAA] gi|294480946|gb|EFG28721.1| endonuclease/exonuclease/phosphatase family protein [Fusobacterium sp. 1_1_41FAA] Length = 286 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 101/307 (32%), Gaps = 55/307 (17%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 L+ F + T S A + + S+NI L + ++ L Q Sbjct: 15 IASVLMIFTMFSTISSADEAYIASFNI----------LRLGAAEKDMVQTAKLLQGF--- 61 Query: 65 DADIVFLQEMGSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D+V L E+ + + ++ NTW S + + ++ + +K Sbjct: 62 --DLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKE-----YFGYVYKK 114 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 V+ ++ G + R +I ++ +H + ++ + Sbjct: 115 DKVKFIKSE----GFYKDGKSSLLREPYGATFKIGNFDFTLVLVH---TIYGNNESQRKA 167 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID----PNDS 233 + ++ + D+ K + +IAGDFN + L + +K D D Sbjct: 168 ENFKMVD-----VYDYFQDKDKKENDILIAGDFN--LYALDESFRPMYKHRDKITYAIDP 220 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 I+ R N D F Q S + ++E D + + +S Sbjct: 221 AIKTTIGTKGRAN---------SYDNFFFSQKYTTEFTGSSG-ALDFSEKDPQLMRQIIS 270 Query: 294 DHCPISI 300 DH P+ I Sbjct: 271 DHIPVFI 277 >gi|229367158|gb|ACQ58559.1| Deoxyribonuclease-1 precursor [Anoplopoma fimbria] Length = 273 Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 80/247 (32%), Gaps = 37/247 (14%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYS--TERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DI+ +QE+ ++ N I + R ++ ++ +++ + + Sbjct: 52 DIILIQEVRDP----RLVATN---ILMNYVNSRCPQYAYHKEVSNPLGPSTYKERYLFLY 104 Query: 125 QQSYPLLGAKDSFSRAG---NRRAVELLVEINGKKIWVLDIHL--KSFCFLDSLENTYSP 179 + + L ++ +R + G+ I ++ H KS Sbjct: 105 RTTTVSLVGSYYYNDTQQLFSRPPFIVKFNDAGRNIVLIPQHTSPKSG------------ 152 Query: 180 SCSLLSQQAQWLKDWI-TQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 ++ L D + + + ++ GDFN +Y+ +D + + Sbjct: 153 ---QTWKEIDALYDVVTDARAQFQTNNIMLLGDFNAGCSYVSRSDWQNIRLFTDKKFDWL 209 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD--IKSRGKRLSDH 295 + +K P D V+ + K ++ S Y + K +SDH Sbjct: 210 IPDSAD----TTVSHSKCPYDRIVVTDDLMKEVVSGSAGVFDYELAYGLTPVQAKAVSDH 265 Query: 296 CPISIDY 302 P+ + Sbjct: 266 FPVEVAL 272 >gi|327539872|gb|EGF26475.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 286 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 97/302 (32%), Gaps = 62/302 (20%) Query: 5 YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++A+ + S A++ R++S+NI + + K + RT + Sbjct: 30 LLIAIATLIAMPGESSAEETNSSHRVLSYNIK----RGYGNDGKTDLPRT-------AEV 78 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L D V LQE+ + + W + D + + +A+ + Sbjct: 79 ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMDYDGGRY-GMAILSRY 137 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +S L ++ + +G K+ ++++H D + + Sbjct: 138 PIEKTESVELARGREPRVALAAHVTL-----PDGNKLTLVNVHF------DYIRDDTVR- 185 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSLIRF 237 +QA ++++I + P ++ GDFN D F + P D F Sbjct: 186 ----FEQATKVREFI---QSLSNPAILLGDFNDTPESRTVQLFQDGFVEADKPADDSFTF 238 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDHC 296 EK R ID+ E + + + L SDH Sbjct: 239 SAEKPDR-----------EIDFLFASP------------ETQWTVKTVDVIDEPLASDHR 275 Query: 297 PI 298 P+ Sbjct: 276 PV 277 >gi|323344203|ref|ZP_08084429.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] gi|323094932|gb|EFZ37507.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] Length = 317 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 84/262 (32%), Gaps = 55/262 (20%) Query: 66 ADIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V L E+ + + + + K + ++ + + +++ Sbjct: 72 PDMVALCEVENDSVMHDLTMRSLLRKAGYRYIMTSSPDL---RGIDVALMYSPF----SF 124 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + S + KD A +++ +G + V +H S ++ + Sbjct: 125 SLLNHHSIRVAPMKDMRPTRDILYASGVVL--SGDTLHVFVVHAPSRAGGEAATRPFR-- 180 Query: 181 CSLLSQQAQWLKDWIT--QKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDS 233 A+ L + ++ ++AGDFN R I+Y+ Sbjct: 181 ----MLVARRLGAAVDSIRRLSPRAKVIVAGDFNDYSDSRSIDYVCKR-----------G 225 Query: 234 LIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 LI + A R K +D+ + D++ L++ + + D K+ G Sbjct: 226 LINVSEGAKGSHGAKGTYRYKGEWGSLDHILADEDLADSLVECRIHDAPFLLTDDKTYGG 285 Query: 291 R--------------LSDHCPI 298 + SDH P+ Sbjct: 286 KQPFRTYIGPKYQQGFSDHLPL 307 >gi|225858419|ref|YP_002739929.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae 70585] gi|225720364|gb|ACO16218.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae 70585] Length = 333 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 92/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 K+ + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATKIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P K N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFKRGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|45656762|ref|YP_000848.1| hypothetical protein LIC10871 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599998|gb|AAS69485.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 202 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 64/181 (35%), Gaps = 25/181 (13%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + R+ D+ +R++ +DADI+ +Q + + + ++ + F + +H + Sbjct: 37 IPRSDLDFQKIREHLLQIDADILAIQNLRNEAEALNILSED-YSCFVNKRSTQSHREIGI 95 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + ++ N+++ + PL ++ R VEL + I ++L Sbjct: 96 CWKKNK-FSI--SNIQIHKADIPLF----FKAQYNQERFVELQIPIGKSYYSFWSVYL-- 146 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 ++ Q L + + F + G+FN + ++ Sbjct: 147 ------YKDKERR-----IDQLYLLNNLL----RKNKNFFVLGNFNDPLYSAHFPGKLFQ 191 Query: 227 T 227 Sbjct: 192 K 192 >gi|229083666|ref|ZP_04215990.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228699629|gb|EEL52290.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 263 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 27/180 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWC----IFYSTERLINHSKR----- 104 L + + D D++ LQE+ V I + + Sbjct: 20 IRHLAKTIQEEDYDVIALQEVSQSIKAQNVCDNKKKDNFGLILLTELEKLGLGNYNIVWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 DI+ IA+ K V Q S+ + ++D+ R+ V + GK I Sbjct: 80 FSHIGYDIYEEGIAIITKYPIVKQGSFFVSASQDTTY-WKTRKIVHATISYQGKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L +++ + GDFN + G Sbjct: 139 CHL--GWWNDEEES--------FKGQVNRLIEYVN----GDELSFLMGDFNNNAHLRGEG 184 >gi|56342183|dbj|BAD73859.1| deoxyribonuclease I [Heterodontus japonicus] Length = 282 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 98/307 (31%), Gaps = 43/307 (14%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + + C S +++ ++NI + +S + ++ + D Sbjct: 4 LITVLTLACVLSTVHSIQICAFNI---------KSFGDSKMSNATIANIIVNIVQRY--D 52 Query: 68 IVFLQEMGSYN--AVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 I+ +QE+ N AV + P + +++ L S ++ I+ R Sbjct: 53 IILIQEVRDENLSAVKALMNKLNSPSAHIYSYIASDPLGRSSYKERYLFIY-----RNTM 107 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 V V G++DS +R + + I + SPS Sbjct: 108 VSVTNSYLYDDGSEDSGHDIFSREPFLVKFSSPYSAVHDFVI----------MPQHTSPS 157 Query: 181 CSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 ++ ++ L + +++ +I GD N +Y+ D + + Sbjct: 158 LAI--KEIDALYDVFFDARRKLGTDNMLIMGDLNAACSYVKPADWADIRLRKDSQFQWLI 215 Query: 239 KEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDH 295 + N+ K D + + +I S + + + + L SDH Sbjct: 216 PDSADT---TTNIATKCAYDRIIAVGSEMKNAVIDGSTAIYNFGKVFNLNNEMTLAVSDH 272 Query: 296 CPISIDY 302 P+ + Sbjct: 273 YPVEVSL 279 >gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161] gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] Length = 256 Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 22/112 (19%) Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK------ 254 P +I GDFN + + I + +K ++ + Sbjct: 158 ENSPVIILGDFN-----TEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPIN 212 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + E F Y + G SDH P++ + D+ Sbjct: 213 ELEKIDYIFVS---------EEFQVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|149409019|ref|XP_001506333.1| PREDICTED: similar to Ribosomal protein S2 [Ornithorhynchus anatinus] Length = 315 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 103/318 (32%), Gaps = 50/318 (15%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY--TLLR 58 + R+ L + L+ A +++ S+NI T E++ ++ T +D +L Sbjct: 33 VNRRMKLTVFLLLLAGLLQAATFLKIASFNIRTFGEKKITNV-------TIADVIVKILN 85 Query: 59 QYAKNLDADIVFLQEMGS--YNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDI 110 +Y DI +QE+ AV K+ +T+ S R S + Sbjct: 86 RY------DIALIQEVRDSRLTAVGKLMDKLNRDSPDTYRFVVSE-----PLGRGSYKEQ 134 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIW-VLDIHLKSFC 168 + + V + L SY +++SF +R + ++ ++ + + L + Sbjct: 135 Y--LFVFRPEKVSLLDSYQYDDSRESFGNDTFSREPMVVMFSSPSTEVKEFVIVPLHA-- 190 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + + + W ++ + GDFN +Y+ + + Sbjct: 191 -APAEAVKEIDALYDVY--LDIISKW------NMDNILFMGDFNAGCSYVSASSWSAIRL 241 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKS 287 N + + D V + S + + Sbjct: 242 RTNPKFQWLISDDVDTTVTSTYCPY----DRIVASGKKLRSSIGPGSAFPFHFEKAYKLK 297 Query: 288 RGKRL--SDHCPISIDYD 303 + L SDH P+ + + Sbjct: 298 QEMALAVSDHYPVEVTIE 315 >gi|20092035|ref|NP_618110.1| hypothetical protein MA3219 [Methanosarcina acetivorans C2A] gi|19917247|gb|AAM06590.1| predicted protein [Methanosarcina acetivorans C2A] Length = 330 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 119/333 (35%), Gaps = 57/333 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV-- 80 K+R+ ++N+ L Q+ N ++R + ++ADI+ LQE+ V Sbjct: 2 KLRIATFNLENLDFQKS-----NKEPTLEERIAVMRPQLQRVNADILCLQEVNGQEEVGH 56 Query: 81 ------AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-----QSYP 129 + K+T ++ ++ ++ + I R + + Q S P Sbjct: 57 PRRLLALEALLKDTQYASFNRVSTVDEGGSQVYDERNLVILSRCEILEHHQYKHNFASAP 116 Query: 130 LLGAKDSFSRAG----------NRRAVELLVEINGKKIWVLDIHLKS-------FCFLDS 172 L + + G R + +++ K + V+++HLKS LD+ Sbjct: 117 LYRIVTAIANGGEEQTAKEITWERPILHAKIKVGEKVMDVINLHLKSKIPTYIPGQKLDN 176 Query: 173 LENTYSPS------CSLLSQQAQWLKDWI---TQKKESLVPFVIA-GDFNRKINYLGNND 222 + S + + Q L+ + ++ P+++ GDFN + + + Sbjct: 177 YTWKTASGWAEGFFISSMKRVGQALEARMLIDDLFNKTENPWIVVCGDFNSEFD-DVPVE 235 Query: 223 DFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRNK-IPIDYFVMDQNAYKFLIQES 274 ++ + + + K +D+ ++ ++ + Sbjct: 236 AIRGRVENTGNGELARRIMFPCEMSIPESTRFSLYHQGKGNMLDHLLVCRDMLAYYKGSE 295 Query: 275 F-SEILYNEDDIKSRGKRL--SDHCPISIDYDF 304 +E+L++E + + SDH P+ +++ Sbjct: 296 VHNELLHDESIAFATDIKFPESDHSPVIAEFEM 328 >gi|302346017|ref|YP_003814370.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149189|gb|ADK95451.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 355 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 103/332 (31%), Gaps = 77/332 (23%) Query: 2 IRKYVLALVFFLV---------PCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKR 49 +R L L+ FL+ P + ++++S+N+ S KN Sbjct: 56 LRTIWLPLLGFLLCYGPIRTYSPFNIPEDKPHGAIKVLSYNVFMFSSWSEPDAKKNP--- 112 Query: 50 TTSDYTLLRQYAKNLDADIVFLQE----MGSYNAVA--------------KVFPKNTWCI 91 + Y ADIV LQE + + + K P + + Sbjct: 113 -------IVDYIVKSKADIVCLQEAQATLDDKDHIYSTLKKHYPYFKLMIKKAPGADYMV 165 Query: 92 FYSTERLI--NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149 S ++ + S+++ A + K L + + S + Sbjct: 166 LLSKYPVLWQDTIPYGSSSNQSVAYMLDIKGTNTLVVNNH-FESNGLSSGDKEGFKTLVK 224 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 E+ + +HL + + + QA+ + ++ + + VP ++ G Sbjct: 225 GELKTGEAKRQSVHL----ITKLGDVSARRA-----PQAETVARYVKKYLDKKVPVILCG 275 Query: 210 DFN-RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NA 266 DFN ++Y + K ++ F + + + ID+ ++ Sbjct: 276 DFNDSPLSY--THRTIAKELND-----CFVESGNGPGISYHKSGMYFRIDHIFCSDDFDS 328 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Y + S + SDH PI Sbjct: 329 YGAKVDNSVTT---------------SDHYPI 345 >gi|313794091|gb|EFS42113.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA1] gi|315077107|gb|EFT49182.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA2] gi|327451399|gb|EGE98053.1| exodeoxyribonuclease III [Propionibacterium acnes HL092PA1] Length = 297 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 48/195 (24%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQ 197 + V++ + V ++L D +++Q + + + + Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDPANEK------TIAKQDRKMAFLTGFRDHLVRR 169 Query: 198 KKE---SLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFP 238 ++E F++ GDFN R +L F + P+ + Sbjct: 170 RQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVR 229 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + I D S Sbjct: 230 AQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAI-------TAEIDRDPSYS 282 Query: 290 KRLSDHCPISIDYDF 304 +R SDH + +DYD Sbjct: 283 ERTSDHAAVVVDYDL 297 >gi|148980013|ref|ZP_01815834.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3] gi|145961456|gb|EDK26760.1| putative phospholipase C precursor [Vibrionales bacterium SWAT-3] Length = 450 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 100/303 (33%), Gaps = 60/303 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + S+N+ L ++ + S L + D++ LQE Sbjct: 182 LNVASYNL-WLLPSVSSNIAGRASIMNHS----LSGF------DVLALQE---------A 221 Query: 84 FPKNTWCIFYSTERLINHSKRDS----NNDIHTAIAV---RKKNVRVLQQSYPLLGAKDS 136 F + I ++ + + +N ++ V R + + D Sbjct: 222 FSTDR-DILFNKLADEYPYRTEVVGGKSNALYDGGVVTFSRHPIIETDSIVFEHCTGTDC 280 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-QAQWLKDWI 195 ++ G V + +G+ + + HL SF +PS L + Q ++ ++ Sbjct: 281 YADKGV---VYTKINKDGEIYHIFNTHLASF---------NTPSAKRLRRLQLGLMRTFM 328 Query: 196 TQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNANKN 250 K + + AGDFN + N DF + + +L P E + + N Sbjct: 329 LTKGIPANEAVIYAGDFN-----IDKNSDFLEYLLMLATLDVDPPEFRGYTRATFDPTIN 383 Query: 251 LR--NK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 K +DY + + + + + ++ + LSDH I + Sbjct: 384 PYAAYKYSGGADVEYLDYVFVSRVHRRAVNNTNTVKLNQRLNSETWGSWHLSDHFAIDAN 443 Query: 302 YDF 304 + F Sbjct: 444 FVF 446 >gi|28493711|ref|NP_787872.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] gi|28572897|ref|NP_789677.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28411030|emb|CAD67415.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28476753|gb|AAO44841.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] Length = 269 Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 100/309 (32%), Gaps = 71/309 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N++ + + + + + DI+ LQE+ Sbjct: 1 MRIATWNVNSIKTR----------------LSQVLHWLTENEIDILALQEI---KCRTNA 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK----NVRVLQQSYPLLGAKDSFSR 139 FP +F + +A+ K ++ + P +++ + Sbjct: 42 FPA---EVFMEH----GYFCAAHGLGGREGVAIVSKSEPQDITTDVEGIPGYDDRNTGKQ 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW---IT 196 + ++ G + + +++ + + S Y WL+ + I Sbjct: 95 DKSDVQARIIAATVGG-VRLYSVYVPNGRDVHSPHYLYK---------LDWLEGFATHIR 144 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDD-----------------FWKTID-PNDSLIRFP 238 + VIAGDFN + +ND F+ +D L+R Sbjct: 145 GVINTEPNLVIAGDFNIVLFDSDSNDPRVQTDTDVFRTPHERQAFYNLLDLGLRDLVRPT 204 Query: 239 KEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFS-EILYNEDDIKSRGKRLS 293 + + + R + ID+ + I S +++E GK S Sbjct: 205 EPEGFTFWDYRAGRFQKNEGLRIDHILGTDP-----IANSVRFAKIHHEQRKGDEGKTPS 259 Query: 294 DHCPISIDY 302 DH P+ I+ Sbjct: 260 DHVPVMIEL 268 >gi|118345658|ref|XP_976659.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89288076|gb|EAR86064.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 480 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 21/202 (10%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + VR++++NI L + + +RT + + DIV LQE+ + Sbjct: 75 RSVRVLTYNI-FLRPPPIKNNKDDYKNERTKLFLNSISDF------DIVCLQELFGFLNQ 127 Query: 81 AK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 K +F FY D V ++++SY Sbjct: 128 RKHKIIFNAMKQGFFYHATSPSPSFFSSYLVD---GGLVTISRFPIIEKSYRPFKYGVLS 184 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + + ++ N I + + HL++ EN + Q +KD+I + Sbjct: 185 DNLSQKGVLYTKIQANDSYIHLFNTHLQAS--YVGAENNVKATVITRVDQLILIKDFIKE 242 Query: 198 -----KKESLVPFVIAGDFNRK 214 +++ +I GDFN Sbjct: 243 QVKKHREKESDIIMICGDFNVN 264 >gi|327333158|gb|EGE74885.1| exodeoxyribonuclease III [Propionibacterium acnes HL097PA1] Length = 297 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 54/195 (27%), Gaps = 48/195 (24%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQ 197 + V++ + V ++L D +++Q + + + + Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDPANEK------TIAKQDRKMAFLTGFRDHLVRR 169 Query: 198 KK---ESLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFP 238 ++ F++ GDFN R +L F + P+ + Sbjct: 170 RQECTAQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVR 229 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + I D S Sbjct: 230 AQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAI-------TAEIDRDPSYS 282 Query: 290 KRLSDHCPISIDYDF 304 +R SDH + +DYD Sbjct: 283 ERTSDHAAVVVDYDL 297 >gi|302866656|ref|YP_003835293.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] gi|302569515|gb|ADL45717.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] Length = 265 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 86/302 (28%), Gaps = 65/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N K + R L + D+V LQE + V Sbjct: 1 MRLATWNVN---------SVKARLPR-------LLDWLATTKPDVVCLQETKCPDGAFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + + ++ N +AV R V G + +R Sbjct: 45 AEVGELGYEVASHSDGRWN------------GVAVLSRVGLADVTVGFPGEPGFPEPEAR 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + ++ V +++ + D Y + L+D + + Sbjct: 93 A---------ISATCDELRVWSVYVPNGRAPDDPHYAYKLA------WFAALRDALEPEV 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIR--------------FPKEKDSR 244 +P + GDFN D + T R P Sbjct: 138 AGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAALAALRDLGLKDVVPTPMKGP 197 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 + + + + SF+ + + D +GK SDH PI +D Sbjct: 198 -HPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDREARKGKGPSDHAPIVVDA 256 Query: 303 DF 304 D Sbjct: 257 DL 258 >gi|289424786|ref|ZP_06426568.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289427574|ref|ZP_06429286.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|295131421|ref|YP_003582084.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|289154749|gb|EFD03432.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289159065|gb|EFD07257.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|291377273|gb|ADE01128.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|313763084|gb|EFS34448.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA1] gi|313773022|gb|EFS38988.1| exodeoxyribonuclease III [Propionibacterium acnes HL074PA1] gi|313802417|gb|EFS43642.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA2] gi|313807850|gb|EFS46334.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA2] gi|313812037|gb|EFS49751.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA1] gi|313812136|gb|EFS49850.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA1] gi|313819198|gb|EFS56912.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA2] gi|313819763|gb|EFS57477.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA1] gi|313823880|gb|EFS61594.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA2] gi|313827241|gb|EFS64955.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA1] gi|313828429|gb|EFS66143.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA2] gi|313831114|gb|EFS68828.1| exodeoxyribonuclease III [Propionibacterium acnes HL007PA1] gi|313833483|gb|EFS71197.1| exodeoxyribonuclease III [Propionibacterium acnes HL056PA1] gi|313838117|gb|EFS75831.1| exodeoxyribonuclease III [Propionibacterium acnes HL086PA1] gi|314914557|gb|EFS78388.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA4] gi|314919199|gb|EFS83030.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA1] gi|314920633|gb|EFS84464.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA3] gi|314925728|gb|EFS89559.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA3] gi|314931457|gb|EFS95288.1| exodeoxyribonuclease III [Propionibacterium acnes HL067PA1] gi|314957017|gb|EFT01123.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA1] gi|314957831|gb|EFT01934.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA1] gi|314960672|gb|EFT04773.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA2] gi|314963372|gb|EFT07472.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA1] gi|314969733|gb|EFT13831.1| exodeoxyribonuclease III [Propionibacterium acnes HL037PA1] gi|314974296|gb|EFT18392.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA1] gi|314976933|gb|EFT21028.1| exodeoxyribonuclease III [Propionibacterium acnes HL045PA1] gi|314979892|gb|EFT23986.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA2] gi|314985810|gb|EFT29902.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA1] gi|314988407|gb|EFT32498.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA2] gi|314988831|gb|EFT32922.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA3] gi|315079798|gb|EFT51774.1| exodeoxyribonuclease III [Propionibacterium acnes HL078PA1] gi|315084894|gb|EFT56870.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA2] gi|315087238|gb|EFT59214.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA3] gi|315088971|gb|EFT60947.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA1] gi|315096818|gb|EFT68794.1| exodeoxyribonuclease III [Propionibacterium acnes HL038PA1] gi|315100579|gb|EFT72555.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA1] gi|315109351|gb|EFT81327.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA2] gi|327325640|gb|EGE67438.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA2] gi|327328234|gb|EGE70001.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA3] gi|327445310|gb|EGE91964.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA1] gi|327446951|gb|EGE93605.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA2] gi|327449053|gb|EGE95707.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA2] gi|327452601|gb|EGE99255.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA3] gi|327457644|gb|EGF04299.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA2] gi|328751915|gb|EGF65531.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA1] gi|328756939|gb|EGF70555.1| exodeoxyribonuclease III [Propionibacterium acnes HL020PA1] gi|328759048|gb|EGF72664.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA2] gi|328762251|gb|EGF75743.1| exodeoxyribonuclease III [Propionibacterium acnes HL099PA1] gi|332676289|gb|AEE73105.1| exodeoxyribonuclease III [Propionibacterium acnes 266] Length = 297 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 48/195 (24%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQ 197 + V++ + V ++L D +++Q + + + + Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDPANEK------TIAKQDRKMAFLTGFRDHLVRR 169 Query: 198 KKE---SLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFP 238 ++E F++ GDFN R +L F + P+ + Sbjct: 170 RQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVR 229 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + I D S Sbjct: 230 AQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAI-------TAEIDRDPSYS 282 Query: 290 KRLSDHCPISIDYDF 304 +R SDH + +DYD Sbjct: 283 ERTSDHAAVVVDYDL 297 >gi|145219569|ref|YP_001130278.1| endonuclease/exonuclease/phosphatase [Prosthecochloris vibrioformis DSM 265] gi|145205733|gb|ABP36776.1| Endonuclease/exonuclease/phosphatase [Chlorobium phaeovibrioides DSM 265] Length = 341 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 87/321 (27%), Gaps = 68/321 (21%) Query: 26 LVSWNINTL-------SEQEGVSLWKNSVKRTTSDYT----LLRQYAKNLD--------A 66 ++ WN+ L S + + T + ++ Sbjct: 33 VMWWNLENLFDTRDDPSTNDSDFTPSGKLHWTAKKLKLKQMRIAFVISAIEKHPDYRRFP 92 Query: 67 DIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DIV + E+ + + PK + + I +A Sbjct: 93 DIVAVCEVENEAVLKATMAKVPKVHYKTLHHDSP--------DIRGIDVGLAYN------ 138 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ G K R +++V G+ + ++ H S F + Sbjct: 139 -PKTLAPTGMKTYCVPLEGRPTRDIVVAGFTAGGRPLHLVLNHWPSRAFDTRWTEKKRIA 197 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + + A+ + D + Q+ ++ GDFN + + + + ++ P Sbjct: 198 AATV---ARAIVDSLLQRNPQ-ADIILMGDFNDEPGDRSLKETLGSSFSR-EQVLSEPDT 252 Query: 241 KDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFL----------------IQESFSE 277 C + + ID ++ + + S S+ Sbjct: 253 YLYNCWDGHDGEGSYRYRGHWEQIDQMLVSSGMLQKSGLRLDSKPFSCFAISPMFPSNSK 312 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 313 YPWRTYEKGKYSGGYSDHLPL 333 >gi|197120014|ref|YP_002140441.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] gi|197089374|gb|ACH40645.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] Length = 249 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 95/292 (32%), Gaps = 58/292 (19%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++++N++ L + +S R + + DIV LQE+ A Sbjct: 6 RSFTIMTYNVHRLIGND----RHSSAPR-------IAEVIHTYQPDIVCLQEL--PGARV 52 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL----GAKDSF 137 + L+ R + R++ +V+ +P+ G Sbjct: 53 RPEVGGACQNLVHELALLETGGRHFFLE-------RERWGKVVLSRFPMRLVQAGGLHPQ 105 Query: 138 SRAG---NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK-- 192 +R R + + V++ G+K+ V+++HL + Q + L Sbjct: 106 NRYRTVVPRGVLWVEVDLFGQKLQVVNVHL--GLTPQER-----------NSQVKVLTGP 152 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +W++ + P + GDFN + + + ++F + +K Sbjct: 153 EWLS-HPDCRPPVALCGDFN-TLPSSTIHKQLKNALMDEQEKLKF--GHNHFTFPSKLPM 208 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D+ + + E++ + SDH P+ + Sbjct: 209 VRF--DHIFVSPDLVVE------EELIPRTKLTGAA----SDHLPLVVRLRL 248 >gi|78063607|ref|YP_373515.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77971492|gb|ABB12871.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 604 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 110/331 (33%), Gaps = 55/331 (16%) Query: 16 CTASVAQK---VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL------- 64 A +R+ S+N +N + + + R ++ ++ + Sbjct: 282 TNAPARDPKSNLRVASFNVLNYFNGNGLGGGFDDPNNRGAKNFQEFQRQEAKIVSALKAI 341 Query: 65 DADIVFLQEM-----GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DAD++ L E+ G +AV ++ N W + + ++ D+ +A+ Sbjct: 342 DADVIGLMEIQNNGYGELSAVRQLAAKLGNNWRVV---DPGVSRLGGDAIT-----VAMI 393 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT- 176 + +V A D +R ++ L+ N + + V HLKS D+ + Sbjct: 394 YDSRKVEPVGRAATLAIDDKNRQPLAQSFRLIAG-NKQSLTVAVNHLKSKNCPDAANDDL 452 Query: 177 ---YSPSC--SLLSQQAQWLKDWI--TQKKESLVPFVIAGDFN--------RKINYLGNN 221 C ++ A + DW+ + ++ GDFN R + G Sbjct: 453 DQGDGQGCWNPTRTRAAAKVADWLAGNPTGVAGQGVLLIGDFNSYTYEDPIRTLETRGYR 512 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQN---AYKFLIQE 273 + + I N + E +A L + + D+ Y + Sbjct: 513 NLVARWIGANAYSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKS 572 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + D R SDH P+ ID Sbjct: 573 AEQQKTFYAPD----AYRSSDHDPVLIDIAL 599 >gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] Length = 788 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 95/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVR--- 117 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 118 ---KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLAAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNNIAPYTSVDPVH----LNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|42779563|ref|NP_976810.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42735479|gb|AAS39418.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] Length = 263 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALYVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|305666513|ref|YP_003862800.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170] gi|88708780|gb|EAR01015.1| hypothetical protein FB2170_09596 [Maribacter sp. HTCC2170] Length = 314 Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 86/250 (34%), Gaps = 50/250 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + ++ D+DIV +QE KV + Y N + I Sbjct: 99 ITRFIAKEDSDIVCIQEFD----YKKVKDFKRYPYKYVNYIFPNQKYVVQS------ILS 148 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 + + +P SR A ++L++ + + V ++HL+S F + Sbjct: 149 KYPIIEKGSLDFPD-------SRNNAIYA-DILIKKD--TVRVYNLHLQSLRFRAGMIKR 198 Query: 177 YSPSCSLLSQQAQWLKDWITQKK-----ESLVPF--VIAGDFNRKINYLGNNDDFWKTID 229 P L + L+ + Q + + V + +I GDFN + + ++ Sbjct: 199 EEPQ-RLFKRLNGSLQKQLEQAELVKEHGNNVDYKKIICGDFN-NTQFSNVYNSIKGEMN 256 Query: 230 PNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + +EK S N R ID+ +MD+ + K+ Sbjct: 257 DS------FQEKGSGFGNTYNFRFLPFRIDFILMDKEI--EITSH------------KNF 296 Query: 289 GKRLSDHCPI 298 +LSDH P+ Sbjct: 297 NIQLSDHEPV 306 >gi|163735903|ref|ZP_02143331.1| hypothetical protein RLO149_08056 [Roseobacter litoralis Och 149] gi|161390839|gb|EDQ15180.1| hypothetical protein RLO149_08056 [Roseobacter litoralis Och 149] Length = 263 Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 60/280 (21%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAK----------VFPKNTWCIFYSTERLINHSKR 104 L Y D++ LQE+ K + P+ L H+ Sbjct: 12 EALVPYVAESAPDVLCLQEVVHSPISEKDWLTYRDGDHILPQRANFFRDVARALPEHTAT 71 Query: 105 DSNNDIHT------------AIA--VRKKNVRV------LQQSYPLLGAKDSFSRAGNRR 144 +A V K + + + Y +G D R+ + Sbjct: 72 FCPAAQGVLWDEDQSFPSQWGLATFVHKSIPIIGQVQGFVHKGYSPVGYGDH-PRSRSAH 130 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + + + I V +H + + ++QAQ L E Sbjct: 131 GIRVYDYNSDRCISVTHMH---GLRDLNGKMDTPER----AEQAQRLLALSRHISEPGDL 183 Query: 205 FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN + + + + + + + ++ DY ++ Sbjct: 184 RIVCGDFN-----VEPHSETLEILGAAGLSELVTGRGFTSTRNTQYKKSGKFADYMLISD 238 Query: 265 NAYKFLIQESFSE--ILYNEDDIKSRGKRLSDHCPISIDY 302 ++ E ++YN + SDHCP+ + Sbjct: 239 -------ADAVQEFNVVYNPEV--------SDHCPLVLTI 263 >gi|171742357|ref|ZP_02918164.1| hypothetical protein BIFDEN_01468 [Bifidobacterium dentium ATCC 27678] gi|171277971|gb|EDT45632.1| hypothetical protein BIFDEN_01468 [Bifidobacterium dentium ATCC 27678] Length = 326 Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 73/269 (27%), Gaps = 58/269 (21%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIF 92 ++ L +V + +D + K+ +++ LQE +A+ + + Sbjct: 98 TDDGYARLMTCNVYKGRADAQEIVDLVKSEHVEVLALQETTDDFVDALNRA-GIADY--- 153 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 + +S+ S++ ++ N D S A + Sbjct: 154 ------LPYSQVSSSDGVY-------GNGLWSATPLGDPADDDVDSSASFMPGGTVSFNG 200 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQKKESLVPFVIAGDF 211 + + +H S QQ + L + K + ++ GDF Sbjct: 201 GTTPVRFVSVHTTS-------PTRSR------WQQWRRSLDELARMKFNTDTRYIFMGDF 247 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIP--IDYFVMDQNA 266 N ++ D + I ++ ID+ V+D Sbjct: 248 NATYDHTPFRDFL------GNRFIDASRQAAGGFVFSWPADIDYVPTFAGIDHIVLDSGM 301 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +KS SDH Sbjct: 302 LA--------------GQVKSEKIDGSDH 316 >gi|293608668|ref|ZP_06690971.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829241|gb|EFF87603.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 812 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 101/331 (30%), Gaps = 60/331 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNL---DADIVFLQEMGS 76 A +R+ S+N+ + T +++ R+ L DAD+ L E+ + Sbjct: 461 ANHIRVASFNVLNY-DNGATGFPTERGATTQAEFDKQHRKIVSALKAIDADVYGLMEIAN 519 Query: 77 YN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 A+A + + W + + R + I AI K V+ L + Sbjct: 520 NGYGPNSAIAHLTSALGSDWKYV-----VPENLDRLGGDAIAVAIIYNSKRVKPLNKPV- 573 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLEN-----TYSPSC-- 181 D + A K V+ HLKS C + C Sbjct: 574 ---VLDLGDKNRTTLAQSFQAVRGNKTFTVIPNHLKSKSCSGVDASSIDADQKDGQGCWN 630 Query: 182 SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRK------INYLGNNDDFW---KTIDP 230 + + W+ + + ++ GD N +++ N + Sbjct: 631 PTRVKAVDQIVQWLAKNPTQVPKQNALLVGDMNSYAKEEPILSFEKANYKVLLNDAKVGQ 690 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI--------QESFSEILYNE 282 + S N N N +D+ + D Y ++ + + + YNE Sbjct: 691 GAEAYSYVFGVASDANGNGGAGN---LDHAIADAALYPKVVRTFAWHINADEPTVLDYNE 747 Query: 283 DDIKSRGKRL---------SDHCPISIDYDF 304 + K L SDH P+ +D D Sbjct: 748 EYKTDEQKALFYAEDAYRSSDHDPVIVDLDL 778 >gi|270307561|ref|YP_003329619.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] gi|270153453|gb|ACZ61291.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] Length = 639 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 45/204 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R++++N+ G + D L + +N AD+V LQE+ Sbjct: 403 PAAPQFSGTLRIMTYNL-----HNGFNTQGRL------DMEALVRVIENSGADVVALQEI 451 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN--VRVLQQSYPLLG 132 W I + R+ ++++A + YP+L Sbjct: 452 -----------SRGWVI---SGRVDMLEWLAQRLNMYSAFGATAGEYWGNAILSKYPILD 497 Query: 133 AKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + + R + ++++ G+ +++ HL E L Q Sbjct: 498 THNVSLESDGLPIKRGYLNAVLDLGGRYLYLAATHL----HHVPEEGDVR-----LIQAG 548 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 + W ++ VI GDFN Sbjct: 549 ELADFW-----DNAPSTVILGDFN 567 >gi|238561644|ref|ZP_00441777.2| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|254200314|ref|ZP_04906680.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|254209389|ref|ZP_04915735.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|147749910|gb|EDK56984.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|147750162|gb|EDK57233.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|238524267|gb|EEP87701.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] Length = 269 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 91/315 (28%), Gaps = 72/315 (22%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + +R+ +WN+N+L+ ++ + + D D++ LQ Sbjct: 1 MSASRIPPIPPMRIATWNVNSLNVRK----------------QHVLDWLAQSDVDVLCLQ 44 Query: 73 E--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E + + + + + +A+ + + S P Sbjct: 45 ELKIPDEKFPREALEAAGYR------------SWFAGQKTYNGVAI------LARASLPF 86 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + G A + L+ + ++ + + LDS + Y Q Sbjct: 87 DETDIVRNIPGFEDAQQRLIAATIDGVRIVSAYFPNGQALDSDKFVYK------MQWLDA 140 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-WKTIDPNDSLIRFP-KEKDSRCNAN 248 L+ W+ + + + GD+N +D W+ + R + + + Sbjct: 141 LQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFAQLVALGFVD 200 Query: 249 KNLRNKIP---------------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 R + P ID+ ++ + + D + Sbjct: 201 AFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTV-------DRVPR 253 Query: 288 RGKRLSDHCPISIDY 302 ++ SDH P+ Sbjct: 254 TWEQPSDHTPVVAQL 268 >gi|28900670|ref|NP_800325.1| hypothetical protein VPA0815 [Vibrio parahaemolyticus RIMD 2210633] gi|28809050|dbj|BAC62158.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 324 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 91/316 (28%), Gaps = 30/316 (9%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFL 71 T S ++ V+ N+ ++ L + L+ DI+ L Sbjct: 5 ANTLSQPSRITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGL 64 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 QE+ S F + F + + + AIA R V + + Sbjct: 65 QEVFSIEETRAYFLSLGFPYFATVDT-PKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSN 123 Query: 132 GAKDSFSRAGNRRA----VELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLS 185 + +V I + HLKS D + E + LS Sbjct: 124 SLTPFGVNEAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLS 183 Query: 186 QQ-----AQWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DS 233 Q A L+D + + + +P V+ GD N+ I+ N+ +T + Sbjct: 184 TQQRGWEAAMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKD 243 Query: 234 LIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYN--EDDIKSRG 289 + +DY ++ Q I Y E + + Sbjct: 244 GWNLQTGSSLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPS 303 Query: 290 K----RLSDHCPISID 301 SDH +S+ Sbjct: 304 YEKDKNASDHAFVSLT 319 >gi|294633236|ref|ZP_06711795.1| secreted protein [Streptomyces sp. e14] gi|292831017|gb|EFF89367.1| secreted protein [Streptomyces sp. e14] Length = 299 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 83/299 (27%), Gaps = 77/299 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75 +R+ ++NI + + D + ++L AD++ LQE+ Sbjct: 52 PLRVATYNI-----------HAGAGEDNVFDLDRTARAIRDLHADVIGLQEVDVHWGDRS 100 Query: 76 -----SYNAVA----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVL 124 + +VF + + H++R +AV R V Sbjct: 101 GFTDEARELARRLRMRVFFAPIYDL----PPAAGHTQRQRF-----GVAVLSRLPVVSAE 151 Query: 125 QQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + E+ V +G + V HL Y P S+ Sbjct: 152 NHEITRLSTQSPDPVPEPAPGFAEVTVRAHGTLVHVYSTHL-----------DYRPDPSV 200 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 Q + + E P V+ GDFN +P+ + + Sbjct: 201 RRTQVDDM---LGVLAEDRGPKVLVGDFN---------------AEPDAPELTRLWGPLA 242 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D +I S ++ + + SDH P+ D Sbjct: 243 DAVPEAGDTYPA------LDPVKRIDVIATSPDAVVTRARTVDTAA---SDHRPVVADL 292 >gi|270262862|ref|ZP_06191133.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13] gi|270043546|gb|EFA16639.1| endonuclease/exonuclease/phosphatase [Serratia odorifera 4Rx13] Length = 298 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 89/285 (31%), Gaps = 45/285 (15%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A K+R+ S+NI V SD T + + K ++ D+V LQE+ Sbjct: 55 APKIRIASFNI-----------AAGKV----SDMTAIAKAIKAMNVDVVALQEVDKLTGR 99 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + + + D + + +A K + YPL + A Sbjct: 100 SGKLDQAEELAKLTGMHVAFGRAIDFDGGEY-GLAFLSKYPLHDSKIYPLPSGQREQRIA 158 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-WITQKK 199 + + V I +++ HL ++ Q + L D I + Sbjct: 159 ---FSAQTDVPEFPAPITLINTHL-----------DTKEDPAMRLDQVRELNDRTIEIRG 204 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ GD N W + + I + D R +N K +DY Sbjct: 205 IK----LLFGDMN-----DVPGSVTWTELSRYWNDIMPTTQ-DGRSWPAENAEIK--VDY 252 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L +S + + D +SDH P+ + Sbjct: 253 IFSGNAQRWHL--DSLTVPNASGDWNGIHWPAVSDHLPVVAELRL 295 >gi|24215969|ref|NP_713450.1| hypothetical protein LA_3270 [Leptospira interrogans serovar Lai str. 56601] gi|24197187|gb|AAN50468.1|AE011487_11 hypothetical protein LA_3270 [Leptospira interrogans serovar Lai str. 56601] Length = 202 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 59/182 (32%), Gaps = 27/182 (14%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 + R+ D+ +R++ +DADI+ +Q + + + ++ C +KR + Sbjct: 37 IPRSDLDFQKIREHLLQIDADILAIQNLRNEAEALNILSEDYSCFV---------NKRST 87 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF-SRAGNRRAVELLVEINGKKIWVLDIHLK 165 + I +K + F ++ R VEL + I ++L Sbjct: 88 QSHREIGICWKKNKFSISNIQIHKADIPPFFKAQYNQERFVELQIPIGKSYYSFWSVYL- 146 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 ++ Q L + + F + G+FN + + Sbjct: 147 -------YKDKERR-----IDQLYLLNNLL----RKNKNFFVLGNFNDPLYSAHFPGKLF 190 Query: 226 KT 227 + Sbjct: 191 QK 192 >gi|332141756|ref|YP_004427494.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551778|gb|AEA98496.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 1346 Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 97/329 (29%), Gaps = 48/329 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAK--NLDADIVF 70 + + V++ S+N+ + + + ++ A ++AD++ Sbjct: 965 IAAPQLNAIGDVKVASFNVLNYFNGPEFPTPRGADSVAEFERQKVKTIAAIVAMNADVLG 1024 Query: 71 LQEMG-----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 L E+ S +A+A + + + + ++I I + V + Sbjct: 1025 LVEIENDGYSSESAIATLVDSVNAELGSDEYSYVALESQLGGDEIAVGIIYKPAVVSLQG 1084 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPS--- 180 A + V NG+ + H KS C + N Sbjct: 1085 NPVTSSNAPFDYGNRQPLLQSF-SVNSNGEDFTLAINHFKSKGSCGSATGNNADLGDGQG 1143 Query: 181 C-SLLSQQAQW-LKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 C + L QA + + Q + ++ GD N Y +L+ F Sbjct: 1144 CWNELRTQAAQGIISLVEQNSDILSDRVIVMGDLN---AYAKEEPILALEEAGYSNLVNF 1200 Query: 238 PKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR---- 288 + + +D+ + + ++++ + I +E + Sbjct: 1201 -------FDGDSAYSYSFGGEMGYLDHALSSPSLTEYVVDATVWHINADEPRVFDYNVEF 1253 Query: 289 -------------GKRLSDHCPISIDYDF 304 R SDH P+ + +F Sbjct: 1254 KSETQLSSYYGADAYRSSDHDPVVVVLNF 1282 >gi|312130846|ref|YP_003998186.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311907392|gb|ADQ17833.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 600 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 34/141 (24%) Query: 186 QQAQWLKDWITQK--KESLVPFVIAGDFN----------------RKI----NYLGNNDD 223 QQA+ LK+W+ + +++ GDFN + +Y D Sbjct: 468 QQAEDLKNWLATRPTGTDDPDYILMGDFNSYAMEDPLIYLDEQGYHPLFPATSYSYVYDG 527 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 FW ++D + + + N +DY + +S +I + Sbjct: 528 FWGSLDHALATPTMKSQVKKAVKWHINSDEAPVLDY---------NMEYKSAEQI---KS 575 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + R SDH PI I Sbjct: 576 YYDASPFRSSDHDPIIIRLKL 596 >gi|225706090|gb|ACO08891.1| Deoxyribonuclease-1 precursor [Osmerus mordax] Length = 287 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 8/101 (7%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-PKEKDSRCNANKNLRNKIPIDYFVMDQ 264 ++ GDFN +Y+ +++ + + S + D+ + P D V Sbjct: 188 ILLGDFNAGCSYVTSSEWVKIRLFTDKSYHWLITDDVDTTVSNTVC-----PYDRIVATT 242 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + + L S Y E S L SDH P+ ++ Sbjct: 243 DMMRGLATGSARVFNYMEALKLSHSLALGVSDHYPVEVELT 283 >gi|89902379|ref|YP_524850.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] gi|89347116|gb|ABD71319.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] Length = 287 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 48/259 (18%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAV--AKV--FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR+ +++ AD+VFLQE+ +A +V +P N F + + + Sbjct: 66 LREAVRSVGADVVFLQEVTGSHARHERRVADYPTNPHYEFLADSIWPQFAYGRNAVYPGG 125 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSF 167 H AV K V +++ D RR + L V ++ V+ +HL Sbjct: 126 HHGNAVLSKFHIVSFENH------DVSIIGPERRGLLHCVLQVPGLDTQVHVICVHL--- 176 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFW 225 + S LL Q L D + Q + P ++AGDFN R+ + Sbjct: 177 --------GLAESHRLL--QLHMLCDLVHQHIPASAPVIVAGDFNDWRRRAH-------- 218 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + +L + A + ++P+ +D+ + I + + Sbjct: 219 AVLAQGANLHEVFVQAYG--KAARTFPARLPV--LALDRIYVRNAIGHAPLVLP------ 268 Query: 286 KSRGKRLSDHCPISIDYDF 304 LSDH P++ + Sbjct: 269 IRPWSHLSDHAPLAATIEL 287 >gi|193215019|ref|YP_001996218.1| endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] gi|193088496|gb|ACF13771.1| Endonuclease/exonuclease/phosphatase [Chloroherpeton thalassium ATCC 35110] Length = 344 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 49/298 (16%) Query: 2 IRKYVLALVFFLVPCTASV-----AQKVRLVSWNINTLSEQEGVSLWKN----------- 45 I+ + L L+ ++ C + + + L WN+ L + K+ Sbjct: 3 IKPFFLLLLGWIFFCQSPLFSQNKPDSLLLAWWNVENLFDTTDDPQTKDEEFTPNGKKQW 62 Query: 46 SVKRTTSDYTLLRQYAKNLD---------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 + R L Q ++ DI+ E+ + +F S Sbjct: 63 TEVRLAQKMKNLAQVILDMKTAPIASGKMPDIIGFCEVEHQALLDTLFC----DYIKSRN 118 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 + + + I A K ++V +++P+ + +R +E+ E+ GK Sbjct: 119 YAFIYKETEDFRGIDIGFAYDKNRLQVKSFKAHPV-----VINEEHSRDILEVEFEVQGK 173 Query: 156 KIWVLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 + V H +S S + L + L V+ GDFN Sbjct: 174 TLVVFGNHWPSRSGGKKRSEPKRAKAAAILRAAIDARLAK------NPSADIVLLGDFND 227 Query: 214 KINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRN-KIPIDYFVMDQN 265 + ++ + + K S + +N +D+ ++ + Sbjct: 228 EPKSPSIKKSLKANGSFEEVKQASDGRLYDCWKGSDAPGSYIYKNEWNKLDHAIVSKG 285 >gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] Length = 250 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGIDIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|144899913|emb|CAM76777.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 256 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 93/311 (29%), Gaps = 87/311 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 VR+ +WNIN + R + L ++ D++ LQE+ Sbjct: 2 VRIATWNIN------------SVKARLPNVMDWL----QSAKPDVLLLQEIKCQDDGFPT 45 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F W + ++ + +A+ ++ Q D +R Sbjct: 46 LDFQSAGWQVAVHGQKS------------YNGVAILSRHTLDNVQIRLPGDEADEQAR-- 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSF--CFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 ++ + + + + ++L + C + + L+ L Sbjct: 92 -------YIQADIQGLRIASLYLPNGNPCPGEKFDYKLRWMRRLVDHSKTLLDQ------ 138 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK---DSRCNANKNLRNKIP 256 +PFV+ GD+N + D + D + P+ + C+ + Sbjct: 139 --GMPFVLGGDYN----ICPTDADVYDPAGWADDALCRPESRALFRELCHLGLTEAFRAL 192 Query: 257 ------------------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ID+F++ A LI + D ++ Sbjct: 193 HPQPGLYTFWDYQAGAWPRGNGLRIDHFLLSPAAADRLIAC-------DIDKEPRGREKA 245 Query: 293 SDHCPISIDYD 303 SDH PI ID + Sbjct: 246 SDHTPIWIDLN 256 >gi|145594280|ref|YP_001158577.1| exodeoxyribonuclease III Xth [Salinispora tropica CNB-440] gi|145303617|gb|ABP54199.1| Exodeoxyribonuclease III [Salinispora tropica CNB-440] Length = 265 Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 84/302 (27%), Gaps = 65/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N K + R L + + D+V LQE + V Sbjct: 1 MRLATWNVN---------SVKARLPR-------LLDWLAGTNPDVVCLQETKCPDGAFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPL-LGAKDSFSR 139 + + ++ N +A+ + +P G D +R Sbjct: 45 AEVGTLGYTVASHSDGRWN------------GVAILSRVGLTDVTVGFPDEPGFPDPEAR 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + + V +++ + LD Y + L+D + + Sbjct: 93 A---------LSATCAGLRVWSVYVPNGRTLDDPHYAYKLA------WLGALRDTLEVEL 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIR--------------FPKEKDSR 244 P + GDFN D + R P Sbjct: 138 TGGAPLAVCGDFNVAPTDSDVWDPALFTGSTHVTPAERTALAALRDLGLDDVVPTPMKGP 197 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 + + + + F+ ++ D +GK SDH PI +D Sbjct: 198 -HPFTYWDYRAGMFHQNKGMRIDLVYASAPFARVVRAAYVDREARKGKGPSDHAPIVVDA 256 Query: 303 DF 304 D Sbjct: 257 DL 258 >gi|296284849|ref|ZP_06862847.1| hypothetical protein CbatJ_14571 [Citromicrobium bathyomarinum JL354] Length = 257 Score = 43.1 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 75/305 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++NIN K + R L ++ + D+ LQE+ S + Sbjct: 1 MRIATFNIN---------GIKARLPR-------LLEWLEETQPDVACLQEIKSQDDG--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + I + +AV K +++ L +S +A Sbjct: 42 FPASEFE-------AIGYQALWHGQKSFNGVAVLAKQGLTMEERQRGLPGDESDDQAR-- 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKESL 202 L VE++G + + +++L + + Y + L + L W +K Sbjct: 93 ---YLEVEVDG--VVIANLYLPNGNPHPGPKFDYKLAWMERLRARMAAL--WAQEK---- 141 Query: 203 VPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GDFN + + D + + + + Sbjct: 142 -PTIVLGDFNVIPQDKDVWSPPAMADDALMQPESRDAYARLLADGWTDAIDTLNPRGGVW 200 Query: 247 A---------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 ++ + ID+ ++ L D ++ SDH P Sbjct: 201 TFWDYQRGAWQRDHGFR--IDHCLLSPELADRLQAAGV-------DKHARGREKASDHAP 251 Query: 298 ISIDY 302 + ++ Sbjct: 252 VWVEI 256 >gi|50843350|ref|YP_056577.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|50840952|gb|AAT83619.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|315106020|gb|EFT77996.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA1] Length = 297 Score = 43.1 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 48/195 (24%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQ 197 + V++ + V ++L D +++Q + + + + Sbjct: 116 GRYIEVDLADTPLTVACLYLPKGATPDPANEK------TIAKQDRKMAFLTGFRDHLVRR 169 Query: 198 KKE---SLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFP 238 ++E F++ GDFN R +L F + P+ + Sbjct: 170 RQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVR 229 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + I D S Sbjct: 230 AQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAI-------TAEIDRDPSYS 282 Query: 290 KRLSDHCPISIDYDF 304 +R SDH + +DYD Sbjct: 283 ERTSDHAAVVVDYDL 297 >gi|163859167|ref|YP_001633465.1| hypothetical protein Bpet4846 [Bordetella petrii DSM 12804] gi|163262895|emb|CAP45198.1| conserved hypothetical protein [Bordetella petrii] Length = 286 Score = 43.1 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 56/203 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +R+VS+NI + +R + + L Y L D+VFLQE+ Sbjct: 4 IRVVSYNI--------HKGRSSLGRRESLNDLRLGLY--GLRPDLVFLQEVQGRNEHISF 53 Query: 75 -----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 S A ++ + Y + N S + AI V +N + Sbjct: 54 LDAQHESLAAALRL------DVAYGCNAIRNRSDHGNALLSRYAI-VEHENQDISDHRLE 106 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G + ++++G+ + +HL F S +Q Q Sbjct: 107 QRGLLHAR------------IQVDGRDVHCFVVHL--GLFAGSRT-----------RQIQ 141 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 L D I++ P ++AGDFN Sbjct: 142 ALTDRISRLVPEGDPILVAGDFN 164 >gi|325105102|ref|YP_004274756.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324973950|gb|ADY52934.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 278 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 96/332 (28%), Gaps = 91/332 (27%) Query: 2 IRKYVLALVFFLVPCTASVAQK---------------VRLVSWNINTLSEQEGVSLWKNS 46 I +VL + + C S A+ +++S+NI G K++ Sbjct: 6 ILIFVLLVSMSSISCGKSAAEPEKDNKPPVEEKSGPTFKVMSYNI-----HIGNPPSKDA 60 Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAKVFPKNTWCIFYST 95 R D + Q D+V L E+ + + ++ + Sbjct: 61 SYR---DLEAIAQVINIQKPDLVALSEVDNKTKRSGTTVDQAKELGRLTGMYYY------ 111 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 +K AV K + Y L F R +LVE G Sbjct: 112 -----FTKAMDYQGGEYGDAVLSKFPIAESKRYELPVTGTGFEP---RSLALILVEKEGH 163 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 K + HL ++T + +L QA L D I P V+AGD Sbjct: 164 KFYFGSTHL---------DHTSAEDNRVL--QANTLVDIIK---SLNYPLVLAGD----- 204 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--ANKNLRNKI--PIDYFVMDQNAYKFLI 271 W + + ++ K + C NK IDY + + Sbjct: 205 ---------WNALPTSQTINILKKALNPTCTDCPYTFPMNKPDRTIDYIMYKPAEKFKVK 255 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y SDH P+ +D + Sbjct: 256 SLKVVNETYA-----------SDHLPLVVDLE 276 >gi|160885625|ref|ZP_02066628.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] gi|156109247|gb|EDO10992.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] Length = 316 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 101/328 (30%), Gaps = 45/328 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLL 57 ++ +L + +V C + + + S+N+ + G S+ N +R Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLR--NANGGDSINGNGWGQR----YPVI 56 Query: 58 RQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 Q + D DI QE + + + P + + Sbjct: 57 AQIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 116 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + + + D+ + G + ++H+ + Sbjct: 117 IEKGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKK 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN 231 S L+ + + L +P ++ GDFN + + Sbjct: 171 ARVESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEK 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL--------- 279 + + N ++ ID+ + + ++ +++ I+ Sbjct: 225 AGFRYAINGTFNNFDPNSFTESR--IDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQAN 282 Query: 280 --YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ +F Sbjct: 283 DCPEEIDIKTYQARTPSDHFPVKVELEF 310 >gi|317476018|ref|ZP_07935271.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|316907813|gb|EFV29514.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 371 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 45/209 (21%) Query: 24 VRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + ++N++ +E G S + + +Y + D++ QE Sbjct: 115 LTVATYNVHHFGNEITGYSCKE------------IARYMQQRHVDVLCFQE--------- 153 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F N S R ++H ++R + YPL G + + Sbjct: 154 -FGDNPHFTTDSLRRALSHWPYALIPADD---SIRGILPVAVFSRYPLAGGRFITYPRSS 209 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDS--------LENTYSPSCSLLSQQAQWLKDW 194 ++ + + + +L+ HL++ + N + A+ L + Sbjct: 210 NCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELAANDTRREAQAVQDAAETLHEN 269 Query: 195 ITQKKES-----------LVPFVIAGDFN 212 ++ P ++ GDFN Sbjct: 270 FVKRAAQTDSIVRLVIASPHPVLVCGDFN 298 >gi|170755597|ref|YP_001781409.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] gi|169120809|gb|ACA44645.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] Length = 352 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 101/304 (33%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTMENMRRITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E N +++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRVSLE-NNRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWIADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N E+ S Y+ + + +DH P+ + Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI------EATSVKAYSME------FKNTDHNPVKM 347 Query: 301 DYDF 304 ++ Sbjct: 348 EFKL 351 >gi|162453061|ref|YP_001615428.1| hypothetical protein sce4785 [Sorangium cellulosum 'So ce 56'] gi|161163643|emb|CAN94948.1| probable secreted protein [Sorangium cellulosum 'So ce 56'] Length = 286 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 83/292 (28%), Gaps = 58/292 (19%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+++ NI + ++R+ + LD D+V LQE+ SY + Sbjct: 25 SLRVLTLNI-WNRHDPW-----------EARLEVIREGLRELDPDVVGLQEVLSYEGRSL 72 Query: 83 VFPKNT---WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + D + AV + Q++PL + Sbjct: 73 ADGIADGLGYEVAFGA-------AHDLGGGVLFGNAVLSRWPIARSQAFPLPTGE----T 121 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + + I HL + Q + D I ++ Sbjct: 122 DEKRSILLAELGSPHGAIPFFVTHLN----WKFHHGAVREA------QVAAVAD-IVMRE 170 Query: 200 E--SLVPFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 +P ++ GDFN +N F T D F + Sbjct: 171 APMEGLPPIVVGDFNAQPEATEIRFMKGLHALNQKSV--YFADTFDQTGKGPGFTFDPVR 228 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 A IDY + + + S +++ E G SDH Sbjct: 229 NPFAAITNEYPRRIDYVFVRGPDAQGRGKPLSSRVVFEE---IRNGVAASDH 277 >gi|260642592|ref|ZP_05416508.2| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621395|gb|EEX44266.1| endonuclease/Exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 379 Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 104/370 (28%), Gaps = 84/370 (22%) Query: 3 RKYVLALVFFLVPCTASVAQKV--RLVSWNINTL------SEQEGVSLWKNSV-----KR 49 R V L+F + + + + R+ WN L S + N++ R Sbjct: 23 RVAVTILLFVICSWSVPAQENIQFRVACWNTENLFDTRHDSLKNDYEFLPNAIRHWNYNR 82 Query: 50 TTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLIN 100 + + + + ++ L E+ + + + + + + + Sbjct: 83 YKKKLSDIARVITAIGEWNPPALIGLCEVENDTVLRDLTRRSPLQELDYRYVMTDSPDLR 142 Query: 101 HSKRD--SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 D+ ++ R ++ V +Q P + + G + Sbjct: 143 GIDVALIYQRDLFKLLSSRSISIPVFRQHRPTRDLLHVNG-----------LLLTGDTLD 191 Query: 159 VLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----- 212 V HL S Y + +L + + +I GDFN Sbjct: 192 VFVCHLPSRSGGAKESEPYRLHAAQILRTEVDSV-----LHTRLHPQVIIMGDFNDYPNN 246 Query: 213 ---RKI----NYLGNNDDFWKTIDPNDSL----------IRFPKEKDSRCNANKNLRNKI 255 RKI +D I P S + K K + + K Sbjct: 247 KSIRKILEAEAPPIRSDSLDIAIHPATSPSSLSPLKLYHLLARKAKTANFGSYKYHGEWG 306 Query: 256 PIDYFVMDQNAYK-----FLIQESFS--EILYNEDDIKSRGKR--------------LSD 294 +D+ ++ F +E ++ + D K G + SD Sbjct: 307 LLDHLIVSGTLLNTSGNFFTHEEKAKVCQLPFLLTDDKKYGGKEPFRTYKGMKYQGGFSD 366 Query: 295 HCPISIDYDF 304 H PI D++ Sbjct: 367 HLPIYTDFEL 376 >gi|332883343|gb|EGK03626.1| hypothetical protein HMPREF9456_01693 [Dysgonomonas mossii DSM 22836] Length = 305 Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 85/314 (27%), Gaps = 52/314 (16%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + AQ + + ++NI Q + R + D DI QE+ Sbjct: 15 SFIFAQTLNVATYNIRN-DNQGDANKGNGWATRCPV----IANLIAYNDFDIWGSQEVKH 69 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + I +K +VL+ + + K Sbjct: 70 NQLIDLLDALPQYSYVGVGRDDGKTEGE------YAPIFFKKDKYKVLKSGHFWMAEKTD 123 Query: 137 FSRAG-----NRRAVELLVEINGKKI--WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G R + ++ K+ W ++H+ D + + L Sbjct: 124 EPNKGWDAALPRICTWVQLKETKGKLKFWFFNLHM------DHVGVIAREESAKL----- 172 Query: 190 WLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 L I + P ++ GDFN K L + ++ + Sbjct: 173 VLAK-IKE-MCGNDPVILTGDFNVDQTHKSYTLLSTSGILTDSYDRAAVRYALNGTFNAF 230 Query: 246 NANKNLRNKIPIDYFVMDQNAY---------KFLIQESFSEILYNEDDIKSRGK-----R 291 + ID+ + + + + D K R Sbjct: 231 KPDLL--TSSRIDHIFVSPSMSVERYGVLTDTYRTPRDGESNIKTGDFPKEYSFDGCDIR 288 Query: 292 L-SDHCPISIDYDF 304 L SDH P+S+ + Sbjct: 289 LPSDHFPVSVKLIY 302 >gi|303236932|ref|ZP_07323510.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] gi|302482861|gb|EFL45878.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] Length = 324 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 106/331 (32%), Gaps = 68/331 (20%) Query: 19 SVAQKVRLVSWNINTL--SEQEGVS-----LWKNSVKRTTSDY-TLLRQY---------- 60 +++R+V WN+ L + + + L + T + Y L + Sbjct: 17 FAQERLRIVEWNVENLFDTVHDSLKNDSEFLPNSPRHWTRTKYWEKLNKIGQGILSCGED 76 Query: 61 -AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD-----SNNDIHTAI 114 A D++ L E+ ++ I+ + + ++ + SN+ + Sbjct: 77 SASWTLPDLIGLCEVE----------NDSTMIYLTQRSNLRKARYEYVMTASNDGRGIDV 126 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSL 173 A+ L K R + ++ E+ +G + ++ +H S + + Sbjct: 127 ALLYSPFSFRFIHADTLAIKPIKGMKPTRDILHVVGEVASGDTLHLVLVHAPSRSGGEKV 186 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDP 230 + +++ L D I +++ +I GDFN + + I Sbjct: 187 SEPFRL---HVAENICNLIDSIKAQEKQ-ANILIMGDFNDYYDNASLRKIYEHGMVNISK 242 Query: 231 NDSLIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILY-NEDDIK 286 N + R K +D ++ Q+ + Q S ++ + E+D K Sbjct: 243 NAIGK---HGAKA------TYRYKGEWNSLDQMLISQHLLPKVKQCSINDAPFLIEEDNK 293 Query: 287 -------------SRGKRLSDHCPISIDYDF 304 SDH P+ +D Sbjct: 294 YGGVKPRRFYNGMRYNGGFSDHLPLVLDLSL 324 >gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8] gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8] Length = 250 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ + A++K G + Sbjct: 36 ----------SKMQQEQNTFEFNGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|116073418|ref|ZP_01470680.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] gi|116068723|gb|EAU74475.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] Length = 276 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 85/305 (27%), Gaps = 73/305 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAKV 83 + SWN+N RT D + + ++ D++ LQE + Sbjct: 3 IASWNVN--------------SVRTRLD--HVLAWLQSHQPDLLCLQETKVADPLFPQTA 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + + +A+ R V L G Sbjct: 47 FESIGYRV------------SFHGQKSYNGVALISRTPLDDVRCGFIGELPGDLEAGELG 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKE 200 ++ V + ++G ++ L + S D +C LK + +E Sbjct: 95 EQKRV-ISALLDGVRVVNLYVPNGSSLTSDKYPYKLKWLNC---------LKRYREAAQE 144 Query: 201 SLVPFVIAGDFNRKINYLGNNDD--FWKTIDPNDSLIRFPKEKDSRCNAN---------- 248 P I GDFN + +D I +D+ E + Sbjct: 145 RDEPLCIVGDFNIGMEARDIHDPERLTGGIMASDAERTALNEALGEGMVDVFRAFEPDAG 204 Query: 249 --KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID+ + ++ + ++ + + SDH P Sbjct: 205 HWSWWDYRSGAWNRDSGWRIDHIYLSEDLLDL-----ARSCVIHKQERGKE--QPSDHAP 257 Query: 298 ISIDY 302 + +D Sbjct: 258 VVVDL 262 >gi|325268539|ref|ZP_08135169.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] gi|324989067|gb|EGC21020.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] Length = 366 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 71/265 (26%), Gaps = 59/265 (22%) Query: 59 QYAKNLDADIVFLQEM-GSYNAVAKVFP-----------------KNTWCIFYSTERLI- 99 Y ADIV LQE +++P + S ++ Sbjct: 126 DYILKSKADIVCLQEAQADVEGTDRIYPALKKHYPYFRLMVKKKPGADHMVLLSRYPVLW 185 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + S ++ A V K + L + + + + +++ Sbjct: 186 QDSIPYGSGSNQSVAYLVDIKGTKTLVVNNH-FESNGLSTGDKENFKTLVKGDMDTHDAR 244 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RKINY 217 HL E + + QA + ++ + + VP ++ GDFN ++Y Sbjct: 245 NESFHL----LRKLGEVSARRA-----PQAVAVARYVRKYLDRKVPVILCGDFNDSPLSY 295 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQE 273 + N ++ ID+ + Sbjct: 296 THR-----------TIARELTDCYVASGNGPGISYHRSGMYFRIDHIFCSDD-------- 336 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPI 298 F DD SDH P+ Sbjct: 337 -FEPYGAKVDD----SAETSDHYPV 356 >gi|290956326|ref|YP_003487508.1| exonuclease [Streptomyces scabiei 87.22] gi|260645852|emb|CBG68943.1| putative exonuclease [Streptomyces scabiei 87.22] Length = 259 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 84/300 (28%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQE---AKIAEDG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + +AV + L G R Sbjct: 42 FPLD-------ALREAGYEAAVHATGRWNGVAVISRVGIEDVVKG-LPGDPGYDGSVEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + +D Y Q + LK + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVDHPHYAYK------LQWFEALKAAVAGDAAGSR 142 Query: 204 PFVIAGDFNRKINYLGNNDDF-----WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 PF + GD+N +DD ++ + R + + + Sbjct: 143 PFAVMGDYN----VAPTDDDVYDVAAFEGLTHVTPAERAALASLREAGLTDVVPRPLKYE 198 Query: 259 YFVMDQNAYKFLIQES--------FSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 + + + ++ + + + S R SDH P+ +D + Sbjct: 199 HPFTYWDYRQLCFPKNRGMRIDLVYGNETFAKAVTDSYVDREERKGKGASDHAPVVVDLE 258 >gi|120554411|ref|YP_958762.1| exodeoxyribonuclease III [Marinobacter aquaeolei VT8] gi|120324260|gb|ABM18575.1| Exodeoxyribonuclease III [Marinobacter aquaeolei VT8] Length = 270 Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 59/281 (20%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L + L+ D++ LQE KV R + + H +A Sbjct: 17 QLEAVIQQLNPDVIGLQE-------TKV---TDEEFPVEAIRELGYHVHFHGQKTHYGVA 66 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + ++ S RR + +NG+ + V++ F Sbjct: 67 -----LLSRAKPEQVIKGYPSDGEDSQRRLITGHFTVNGEPLTVIN-----GYFPQGESR 116 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWK---- 226 + + L ++ + + ++ GD N R I +N W Sbjct: 117 DHPVKFPAKEKFYADLMAYLDELTKKPGHILVMGDMNISPTDRDIGIGADNAKRWLRSGK 176 Query: 227 ------------TIDPNDSLIRFPKEKDSRCNANKNLRNKIP-----------IDYFVMD 263 ++ F N + ID + Sbjct: 177 CSFLPEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRIDLIMAS 236 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + S Y+ +R SDHCP+ +D Sbjct: 237 DSLLPKAKAAGVS---YD----IRAMERPSDHCPVWASFDL 270 >gi|49476204|ref|YP_034245.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49239012|emb|CAF28312.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 269 Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 68/306 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--AK 82 RL +WNIN++ + + QY + ADI+ LQE +A+ K Sbjct: 4 RLATWNINSIRLR----------------LAQIFQYLELFSADILCLQETKCPDALFPVK 47 Query: 83 VFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + I S ++ + +A+ V + + + + + Sbjct: 48 AFEAAGYKYIALSGQKS------------YNGVAI------VSRLPFKSVEKRFFCQKQE 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQKK 199 R + + VE+ GK + + + ++ + D + + + +L++ I + Sbjct: 90 CRY-ISVTVEVYGKSMRIHNFYVPAG--GDVPDADVNE---KFRHKLDFLEEMSSIQADQ 143 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKN-----LRN 253 V + GD N I L + K + S + + C ++ Sbjct: 144 GDGVSSFLVGDLN--IAPLPEDVWSHKQLLKVVSHTPIETERLQALCCQGGWVDLMRMQF 201 Query: 254 KIPID-YFVMDQNAYKFLIQESFSEI--LYNEDDIKSRGKRL------------SDHCPI 298 +P Y A + + + + +++ D+ S L SDH P+ Sbjct: 202 PVPTKLYTWWSYRARDWALADRGRRLDHIWSSPDLTSFVAELSIFRHTRGWNQPSDHVPV 261 Query: 299 SIDYDF 304 +DF Sbjct: 262 QTVFDF 267 >gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] Length = 256 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 82/303 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++L+SWN+N L +++ +D+ +ADI +QE M A Sbjct: 1 MKLISWNVNGLRA---------CMQKGFADF------FNREEADIFCVQETKMHPEQAD- 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + F+++ +S TA+ R + V +G + Sbjct: 45 --FAFDGYQSFWNSAEKKGYSG--------TAVFTRVPPLSVRY----DMGEPEHTGEGR 90 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 ++ + + ++++++ +S + + + + ++ Sbjct: 91 -------VITVESEAFFLVNVY-----TPNSQRDLVRLDYRMRWE--DAFRAYLLTLNRD 136 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSL----IRFPKEKD 242 P V+ GD N + + + +P++KD Sbjct: 137 K-PVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQKMTDLLEAGFIDTFRALYPEQKD 195 Query: 243 SRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + + + + IDYF++ + + D+ SDHCP Sbjct: 196 AYTWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTI------YADVPG-----SDHCP 244 Query: 298 ISI 300 + + Sbjct: 245 VGL 247 >gi|237737969|ref|ZP_04568450.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229419849|gb|EEO34896.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 274 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 101/308 (32%), Gaps = 46/308 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +RK + +++ L+ +AQ+ + S+N TL + + D+ L+ + Sbjct: 1 MRKLKILILYILM-TLTLLAQEGYIASFN--TLR-----------IGKAQKDFKLMSKVL 46 Query: 62 KNLDADIVFLQEMGSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D+V L E+ + V ++ W S + + S ++ I Sbjct: 47 EGF--DVVGLIEVMNPIGVERLIKELEKESGVRWEYHISPYPVGSTSYKEYFAYIWK--- 101 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + G + R +I + +H F Sbjct: 102 ------SERAEFLGDRGFYPDDEKKFERAPYGADFKIGNFDFTFVLVH---SIFGKRESE 152 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + ++ + D+ +IAGDFN L +D+ ++ + + + Sbjct: 153 RRAEAFTM-----DRVYDYFQNLDSEENDIIIAGDFN-----LSADDEAFENLLNHSDEV 202 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K+ + D + + + +S I + + + ++SDH Sbjct: 203 VHVLNPRIKTTIGKD-KLASSYDNMFLSKIYTQEFEGKSG-AIDFTKKQYRMMKDKISDH 260 Query: 296 CPISIDYD 303 PI I D Sbjct: 261 LPIFIIVD 268 >gi|149277549|ref|ZP_01883690.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] gi|149231782|gb|EDM37160.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] Length = 278 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 102/316 (32%), Gaps = 62/316 (19%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M K +L F L+ C AQ + + ++N+ ++ + +LW + + Sbjct: 1 MKLKLLLFSAFTLMTCLGLQAQSLTIGTFNLRYDTKSDTGNLWVDRAP--------IAAN 52 Query: 61 AKNLDA-DIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D++ +QE + N ++K P + + S AI R Sbjct: 53 LIRFHGFDVLGVQEGLINQINDLSKALP--EYERAGVGRDDGKEAGEHS------AIYYR 104 Query: 118 KKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCF 169 ++L++ P K NR + ++ K +V + H F Sbjct: 105 SDRFKLLKKGDFWLSETPDKPGKGWDVTCCNRICSWVYLQDMSTKKSFYVFNAH-----F 159 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK--- 226 S L+ ++ + P + GD +N ++ + Sbjct: 160 DHQAVIARQESAKLILRKINEI--------AGNSPALFMGD----LNGSRTSEWYLALAN 207 Query: 227 --TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLIQESFSEILYNE 282 I S +++P E + N K + ID+ M + A K+ Y Sbjct: 208 SGLIKDVHSAVKYPYENNGSSNGFKIPKGMGVIDHIFMSKQFTAQKW----GILTDTY-- 261 Query: 283 DDIKSRGKRLSDHCPI 298 GK SDH P+ Sbjct: 262 -----FGKYPSDHFPV 272 >gi|148700527|gb|EDL32474.1| Traf and Tnf receptor associated protein, isoform CRA_d [Mus musculus] Length = 349 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 93/296 (31%), Gaps = 50/296 (16%) Query: 8 ALVFFLVPCTASV--AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + P + + + ++WNI+ L +G +L + R + L Y Sbjct: 85 TTILEASPSGTPLEDSSTISFITWNIDGL---DGCNLPE----RARGVCSCLALY----S 133 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+VFLQE+ P +C + + TAI ++K V+ Sbjct: 134 PDVVFLQEV---------IPP--YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKS 182 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 Q R + + V + G + ++ HL+S T S + Sbjct: 183 QEIIPFPNTKM-----MRNLLCVNVSLGGNEFCLMTSHLES---------TREHSAERIR 228 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK----INYLGNNDDFWKTIDPNDSLI--RFPK 239 Q L Q+ + AGD N + I G D+ + + ++ Sbjct: 229 QLKTVLGK--MQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTW 286 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + N K D + LI +S + + D SDH Sbjct: 287 DTKANNNLRIPAAYKHRFDRIFF-RAEEGHLIPQSLDLVGLEKLDCGRFP---SDH 338 >gi|74198542|dbj|BAE39751.1| unnamed protein product [Mus musculus] Length = 326 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 93/296 (31%), Gaps = 50/296 (16%) Query: 8 ALVFFLVPCTASV--AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + P + + + ++WNI+ L +G +L + R + L Y Sbjct: 62 TTILEASPSGTPLEDSSTISFITWNIDGL---DGCNLPE----RARGVCSCLALY----S 110 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+VFLQE+ P +C + + TAI ++K V+ Sbjct: 111 PDVVFLQEV---------IPP--YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKS 159 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 Q R + + V + G + ++ HL+S T S + Sbjct: 160 QEIIPFPNTKM-----MRNLLCVNVSLGGNEFCLMTSHLES---------TREHSAERIR 205 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK----INYLGNNDDFWKTIDPNDSLI--RFPK 239 Q L Q+ + AGD N + I G D+ + + ++ Sbjct: 206 QLKTVLGK--MQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTW 263 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + N K D + LI +S + + D SDH Sbjct: 264 DTKANNNLRIPAAYKHRFDRIFF-RAEEGHLIPQSLDLVGLEKLDCGRFP---SDH 315 >gi|9507213|ref|NP_062424.1| tyrosyl-DNA phosphodiesterase 2 [Mus musculus] gi|67462082|sp|Q9JJX7|TYDP2_MOUSE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein gi|8247283|emb|CAB92971.1| putative TRAF and TNF receptor associated protein [Mus musculus] gi|56237843|emb|CAI26084.1| Traf and Tnf receptor associated protein [Mus musculus] gi|124376774|gb|AAI32512.1| TRAF and TNF receptor associated protein [Mus musculus] gi|124376776|gb|AAI32514.1| TRAF and TNF receptor associated protein [Mus musculus] gi|148700528|gb|EDL32475.1| Traf and Tnf receptor associated protein, isoform CRA_e [Mus musculus] Length = 370 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 93/296 (31%), Gaps = 50/296 (16%) Query: 8 ALVFFLVPCTASV--AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 + P + + + ++WNI+ L +G +L + R + L Y Sbjct: 106 TTILEASPSGTPLEDSSTISFITWNIDGL---DGCNLPE----RARGVCSCLALY----S 154 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+VFLQE+ P +C + + TAI ++K V+ Sbjct: 155 PDVVFLQEV---------IPP--YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKS 203 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 Q R + + V + G + ++ HL+S T S + Sbjct: 204 QEIIPFPNTKM-----MRNLLCVNVSLGGNEFCLMTSHLES---------TREHSAERIR 249 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK----INYLGNNDDFWKTIDPNDSLI--RFPK 239 Q L Q+ + AGD N + I G D+ + + ++ Sbjct: 250 QLKTVLGK--MQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTW 307 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + N K D + LI +S + + D SDH Sbjct: 308 DTKANNNLRIPAAYKHRFDRIFF-RAEEGHLIPQSLDLVGLEKLDCGRFP---SDH 359 >gi|239995387|ref|ZP_04715911.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii ATCC 27126] Length = 1097 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 94/320 (29%), Gaps = 49/320 (15%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-----LRQYAKNLDADIVFLQEMG- 75 V++ S+N+ L+ G + + + ++ + +DAD++ L E+ Sbjct: 721 GDVKVASFNV--LNYFNGPNFPTSRGADSEDEFARQQAKTVAAIVA-MDADVLGLVEIEN 777 Query: 76 ----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 S +A+A + + + ++I I + V + Sbjct: 778 DGYGSDSAIASLVNSVNAELGSDVYSYVALESLLGGDEIAVGIIYKPATVTPQGAAVTSS 837 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--FCFLDSLENTYSPS---C-SLLS 185 A + V N + + H KS C + + C + L Sbjct: 838 EAPFDYGNRQPLLQTF-SVNSNSEAFTLAVNHFKSKGSCGSATGNDADLGDGQGCWNELR 896 Query: 186 QQAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 QA L + + ++ GD N Y + +L+ + + Sbjct: 897 TQAALGLTALVQNSEGLSDRVIVMGDLN---AYAKEDPILALEDAGYSNLVNLFHGESA- 952 Query: 245 CNANKNLRNKIPI---DYFVMDQNAYKFLIQESFSEILYNEDDIKSR------------- 288 + I D+ + +++ + I +E + Sbjct: 953 ----YSYSFGGEIGYLDHALSSSTLTEYVADATVWHINADEPRVFDYNVEYKSETQLSSY 1008 Query: 289 ----GKRLSDHCPISIDYDF 304 R SDH P+ + DF Sbjct: 1009 YGADAYRSSDHDPVIVVLDF 1028 >gi|91785939|ref|YP_546891.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] gi|91695164|gb|ABE41993.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] Length = 267 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 84/258 (32%), Gaps = 46/258 (17%) Query: 57 LRQYAKNLDADIVFLQEM--GSYNAVAKV--FPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR+ + + AD+VFLQE+ K +P F + + + + Sbjct: 46 LREAVRTVGADVVFLQEVTGNHLKHADKFDNYPDTPHYEFLADTIWPQFAYGRNAVYTNG 105 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSF 167 H AV K V ++ +D RR + EL V + + +HL Sbjct: 106 HHGNAVLSKFPIVRFEN------RDVSISGPERRGLLHCELKVPGRSVNVHAVCVHL--- 156 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWK 226 L T+ QQ + L D + + P V+AGDFN D Sbjct: 157 ----GLMETHRV------QQMEMLCDLVRKDIPPHAPVVVAGDFN---------DWRLRA 197 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + A + ++P+ +D+ + I + + Sbjct: 198 HTLLESGADLHEVFVQANGQAARTFPARLPL--LRLDRIYVRNAIGHAPVVLP------S 249 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH P++ + + Sbjct: 250 RPWSHLSDHAPLAAEIEL 267 >gi|330466791|ref|YP_004404534.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] gi|328809762|gb|AEB43934.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] Length = 265 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 86/310 (27%), Gaps = 83/310 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N K + R L + + D+V LQE + V Sbjct: 1 MRLATWNVN---------SVKARLPR-------LLDWLAGTEPDVVCLQETKCPDGAFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ N +A+ R V G + +R Sbjct: 45 AEVGDLGYTVASHSDGRWN------------GVAILSRIGLSDVTVGFPGEPGFPEPEAR 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + +G ++W +++ + D Y + L+D + + Sbjct: 93 A-------IAATCDGVRVW--SVYVPNGRTPDDPHYAYKLA------WLAALRDALDAEL 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC-------------- 245 + GDFN +DD W D + + Sbjct: 138 TDGRALAVCGDFN----VAPTDDDVW------DPALFATSTHVTPAERAALAALRDLGLV 187 Query: 246 ----------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLS 293 + + + + F+ + + D +G+ S Sbjct: 188 DVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFARTVSSAYVDREARKGRSPS 247 Query: 294 DHCPISIDYD 303 DH PI +D Sbjct: 248 DHAPIVVDAS 257 >gi|330831230|ref|YP_004394182.1| putative phospholipase C [Aeromonas veronii B565] gi|328806366|gb|AEB51565.1| Putative phospholipase C [Aeromonas veronii B565] Length = 438 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 98/302 (32%), Gaps = 60/302 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-- 76 ++++ S+N+ L + + +R TLL Y K DA + LQE+ Sbjct: 169 PAENRLKVASYNVWAL-----PVIASSIGER----LTLLPDYLKGYDA--LLLQEVFDGR 217 Query: 77 ----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A+AK +P + + IN +D I R VR Q YP Sbjct: 218 REGFLQALAKEYP---YQTKVLDKPGIN------VHDGGVVIVSRYPIVREAQLVYPQCT 268 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----QA 188 D F+ G A + GK + H SF + L Q Q Sbjct: 269 GTDCFADKGVMYAEVIK---GGKAWHLFATHTASF---------DTDEARKLRQIQFGQI 316 Query: 189 QWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + L + K + + GDFN RK N ++ ++ ++ Sbjct: 317 RSLAA--SLKIPATDTVIYGGDFNVNKRKFADDYAN--MLANLNAHEPAYGGY--TEATF 370 Query: 246 NANKNLR---------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + N N +DY V+ + + I + D LSDH Sbjct: 371 DPRINPYAGGPLSGGANVEYLDYLVVSREYGNASHNLNTVWIPRSSDGSLWPASNLSDHF 430 Query: 297 PI 298 P+ Sbjct: 431 PV 432 >gi|312794993|ref|YP_004027915.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] gi|312166768|emb|CBW73771.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] Length = 301 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 42/215 (19%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSYNAVAK 82 SWN+ K + ++++ + AD+ FLQE M + + Sbjct: 50 SWNL-----------HKGRSPLGLQAWQSMQRWMQATPADVYFLQEAMARRMPAPVLASN 98 Query: 83 VFPK-------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 F + + W + + ++ + R N + L G D Sbjct: 99 GFGEPLQGALTDVWQCQATEIAQALRLQLTLGPNVFKP-SWRHGNAILSPHPLDLGGRWD 157 Query: 136 SFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R R + + + +L +HL +L +Q W+ W Sbjct: 158 ISAHRFEKRGLLVARATLYNTPVTLLCVHL-------ALTRQSR------LRQMHWIAHW 204 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 I ++ + P V+AGDFN ++ +++ + I Sbjct: 205 I-AREAATGPLVLAGDFN---DWKNDSEPLFAEIG 235 >gi|222106133|ref|YP_002546924.1| hypothetical protein Avi_5005 [Agrobacterium vitis S4] gi|221737312|gb|ACM38208.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 245 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 41/256 (16%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + + +ADIV LQE+ + + + + +H N Sbjct: 23 DPARIAEVIVATEADIVCLQEVD--VGRNRTSGIDQADVIAGYLTMQSHFHSALNVAEE- 79 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 R + + + ++ SR R A+ + V I + V C Sbjct: 80 ----RYGDALLTRFPTRIVQQGMLPSRGEQRGALLVEVSIGQIAVNV--------CVTHF 127 Query: 173 LENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID- 229 + +QA+ L +W+ E+ P V+A D N +N +K + Sbjct: 128 GLRAGERA-----EQARALLGVEWLGPLLEADAPIVVAADLN-----AVSNSKAFKLLTA 177 Query: 230 --PNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + + SR R +D+ ++ + + D Sbjct: 178 RLADATKANLKSDSLSRSKPTFPSRFPFLRLDHVLISGG---------LNILEARVIDTP 228 Query: 287 SRGKRLSDHCPISIDY 302 +R SDH P+ + Sbjct: 229 -LARRASDHLPLLVTM 243 >gi|123476231|ref|XP_001321289.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121904112|gb|EAY09066.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 339 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 47/312 (15%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----- 73 +K++++ +N + + + R+ + +Y D+V LQE Sbjct: 47 FQTKKLKILDFNAFWRPQLLHLFKEEYMRDRSKILLERISEY------DVVCLQEGFQFG 100 Query: 74 -------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 + + NA+ + + L+NH DS I + + Sbjct: 101 SDISKNFIEAANAL-----GFKYVLTSKLPPLLNHQVIDSGLVIISKF----PILESDCV 151 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 Y D+F+ G A+ ++++ K + + HL++ ++ + Sbjct: 152 RYTAGCGFDAFAAKG---ALYAKIQLDEKNHVHLFSTHLQAS--YQYGKDPTDVDVKVRQ 206 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK-----TIDPNDSLIRFPKE 240 Q L + QK P ++ GD N + + K + D+L++ E Sbjct: 207 SQFDELSALMAQKVTDGYPAIVVGDLNVNARFGDEYLNLLKHFTIPNYESVDTLLKDYGE 266 Query: 241 KDSRCNANKN--------LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ++ + IDY + + L E + + L Sbjct: 267 HPITFGNMEDVTLTEPYFQKTVQSIDYIFLFEKEQSPLKVE-YKSKVNEMRVQNQPYGFL 325 Query: 293 SDHCPISIDYDF 304 SDH + ++ F Sbjct: 326 SDHFAVESEFTF 337 >gi|91216737|ref|ZP_01253702.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC 700755] gi|91185206|gb|EAS71584.1| hypothetical protein P700755_08744 [Psychroflexus torquis ATCC 700755] Length = 370 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 58/249 (23%) Query: 7 LALVFFLVPCTASVAQKVRLVS-------------WNINTL--SEQEGVSLWKNSV---- 47 L L F ++ + S QK S +N+ L +E + ++S Sbjct: 10 LFLGFIVLLSSCSSVQKTTPTSQESEEFLINTIGFYNLENLFDTEDDPTKFDESSPLMEI 69 Query: 48 ---KRTT---SDYTLLRQYAKNLDADI-------VFLQEMGSYNAVAKVF-----PKNTW 89 +R T + + + +L +++ + + E+ ++N + + + Sbjct: 70 AEGERETIYRAKVANMAKVIADLGSEVTGKPPAVIGVCEVENFNVLQDLVNDHSLSGYDY 129 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRAV 146 I H I A+ RK R + L D R R + Sbjct: 130 GII--------HYNSPDARSIDVALLYRKSIFRPIHSKAHELVLYSDIDRTKRKYTRDQL 181 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 + +++G+++ + H S + + + L+++ I ++ P+ Sbjct: 182 YVKGKLDGEEMHFIVNHWPSRRGGEKRSRPNRVNAAKLTKK-------IKDSIQTQDPYA 234 Query: 207 ---IAGDFN 212 I GDFN Sbjct: 235 KILIMGDFN 243 >gi|260063471|ref|YP_003196551.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] gi|88782915|gb|EAR14089.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] Length = 332 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 93/311 (29%), Gaps = 102/311 (32%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ S+N G L + LR ++++ADI+ QE+ Y + Sbjct: 94 TEGLRIASFN-------SGNVLAEADNP------AGLRTAMEDINADILCFQELERYGS- 139 Query: 81 AKVFPKNTWCI-FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F + + +S E + ++ AI VR +P F+ Sbjct: 140 ---FDVSRYPYRAFSPEIIGKSTQ---------AIFSEYPIVRSGSIDFPDTSNNAIFAD 187 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK- 198 V + G I + ++HL+S S +L ++ W ++ Sbjct: 188 ----------VAVKGDTIRIYNVHLES---------YRIRSERILYREY---GGWFLRRF 225 Query: 199 ------------------KESLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDS 233 +E+ P +I GDFN +I G D F S Sbjct: 226 RAVAGQHVSQARLVKAHQQEAPYPTIICGDFNATPFSHTYRILSAGLEDSF----GQAGS 281 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 I IDY + D E +++ LS Sbjct: 282 GIGATYSLRG---------LPYRIDYILADSRM------EVLHHKIFDIH--------LS 318 Query: 294 DHCPISIDYDF 304 DH P+ Sbjct: 319 DHRPVMATLRL 329 >gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] Length = 273 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 14/145 (9%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SY 77 ++ +SWNI++L+ + + R D KN DADI+ LQE S Sbjct: 1 MKFISWNIDSLNAALTSDSARAKLSRDVLDT------IKNEDADIIALQETKLPATGPSK 54 Query: 78 NAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K+F + + S+ S + + V++ + L + Sbjct: 55 KHKEKLFEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKVKESFPEIGAPDTMDLEGRI 114 Query: 136 SFSRAGNRRAVELLVEINGKKIWVL 160 + V++ G ++ L Sbjct: 115 LTLELDDYYFVQVYTPNAGGELNRL 139 >gi|146307459|ref|YP_001187924.1| exonuclease III [Pseudomonas mendocina ymp] gi|145575660|gb|ABP85192.1| Exodeoxyribonuclease III [Pseudomonas mendocina ymp] Length = 270 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 90/314 (28%), Gaps = 80/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLEALIAKHQPDVIGLQETKVADEQ--- 41 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 FP+ S R + + H +A + ++ LQ+ +P G + Sbjct: 42 --FPE-------SEIRQLGYHVHYHGQKGHYGVALLSRQEPLNLQKGFPNDG-----EES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + +G + V++ F + + L+ + ++ + Sbjct: 88 QRRFIYGTFADAHGNPVTVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFD 142 Query: 201 SLVPFVIAGDFN-------------RKINYL---------GNNDDF-----WKTIDPNDS 233 V+ GD N ++ +L + W +D Sbjct: 143 PQQALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSFLPEEREWLATLKNWGLVDSFRH 202 Query: 234 LIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ S + + + ID + Q L D Sbjct: 203 LNPTVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQALQGRLKDAGI-------DYDLRG 255 Query: 289 GKRLSDHCPISIDY 302 + SDH PI ++ Sbjct: 256 MDKPSDHAPIWLEL 269 >gi|301760096|ref|XP_002915856.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like, partial [Ailuropoda melanoleuca] Length = 366 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 50/279 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++WN++ L + Y + D++FLQE+ Sbjct: 119 SFITWNVDGLDLNNLQERARGVC-----------SYLTLYNPDVIFLQEV---------I 158 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P +C + TAI ++K V+ Q R Sbjct: 159 PP--YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKM-----MRN 211 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + ++G ++ ++ HL+S T + ++Q LK Q+ Sbjct: 212 LLCVYASVSGNELCLMTSHLES---------TRGHAKERMNQFKTVLKK--MQEAPESAT 260 Query: 205 FVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + AGD N + + N D W+ + + + CN K+ Sbjct: 261 VIFAGDTNLRDHEVTKCGGLPSNILDVWEFLGKPKHCQ-YTWDTQMNCNLGIAPACKLRF 319 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDH 295 D A ++ +S + + D SDH Sbjct: 320 DRIFFRTAAESGHIVPQSLELLGLEKLDCGRFP---SDH 355 >gi|281352756|gb|EFB28340.1| hypothetical protein PANDA_003873 [Ailuropoda melanoleuca] Length = 353 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 84/279 (30%), Gaps = 50/279 (17%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 ++WN++ L + Y + D++FLQE+ Sbjct: 106 SFITWNVDGLDLNNLQERARGVC-----------SYLTLYNPDVIFLQEV---------I 145 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P +C + TAI ++K V+ Q R Sbjct: 146 PP--YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKM-----MRN 198 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + ++G ++ ++ HL+S T + ++Q LK Q+ Sbjct: 199 LLCVYASVSGNELCLMTSHLES---------TRGHAKERMNQFKTVLKK--MQEAPESAT 247 Query: 205 FVIAGDFNRKIN-------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 + AGD N + + N D W+ + + + CN K+ Sbjct: 248 VIFAGDTNLRDHEVTKCGGLPSNILDVWEFLGKPKHCQ-YTWDTQMNCNLGIAPACKLRF 306 Query: 258 DYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDH 295 D A ++ +S + + D SDH Sbjct: 307 DRIFFRTAAESGHIVPQSLELLGLEKLDCGRFP---SDH 342 >gi|29348242|ref|NP_811745.1| hypothetical protein BT_2833 [Bacteroides thetaiotaomicron VPI-5482] gi|29340145|gb|AAO77939.1| endonuclease/exonuclease/phosphatase-like protein [Bacteroides thetaiotaomicron VPI-5482] Length = 361 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 52/261 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y + +ADI+ LQE S + + + S ++ Sbjct: 125 SYLADSEADIICLQEYNSTK-------NKKYLTDEDIRKALKAYPYRSIHNPEKG----- 172 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF--------CFL 170 + +P+L A+ + +++ +++N I +++ HL+S + Sbjct: 173 GSQLACFSKFPILSARPIKYESTYNSSMQYTLKVNEDTITLINNHLESNKLTKEDKVIYE 232 Query: 171 DSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVIA------------GDFNRKINY 217 D +++ + L Q + L + + +A GDFN + Sbjct: 233 DMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSKYPTIIACGDFN-DASI 291 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + +D F + + + ID ++ N + Sbjct: 292 SYTHRILTQQLDD-----AFTQSGRGLGISYNLNKFYFRIDNILISPNQKAY-------- 338 Query: 278 ILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 339 -----NCTVDRSIKDSDHYPI 354 >gi|116669243|ref|YP_830176.1| 5'-nucleotidase domain-containing protein [Arthrobacter sp. FB24] gi|116609352|gb|ABK02076.1| 5'-Nucleotidase domain protein [Arthrobacter sp. FB24] Length = 1525 Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 108/352 (30%), Gaps = 74/352 (21%) Query: 16 CTASVAQKVRLVSWN-INTLSEQEG---------------VSLWKNSVKRTTSDYTLLRQ 59 A+V +++ S+N +N +++ R ++ L++ Sbjct: 505 APAAVGGTLKIASFNVLNYFPTTGDMLAGCTFYTDRDGNPITVRGGCDARGAANAENLKR 564 Query: 60 YAKNL-------DADIVFLQEMGSYN--------AVAKVF------PKNTWCIFYSTERL 98 + AD+V L E+ + A+AK+ W Sbjct: 565 QQDKIVAAIGKSGADVVSLMEVENSAQFGKDRDDALAKLVEALNIPTPGIWDYV---RTP 621 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NG 154 N + I TA +K + +S D+ + A R+ + + + + Sbjct: 622 ANAPPLADEDMIRTAFIYKKAAAEPVGESVI---HNDTVAFASARKPLAQVFKPVGASDD 678 Query: 155 KKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKESL--VPFVIAG 209 KK + H KS + S L++ QA+ L + + S + G Sbjct: 679 KKFIAIANHFKSKGSAATPEDTDKGQGASNLARTEQAKSLLAFSNDLQASKGTDKVFLMG 738 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI---DYFVMDQNA 266 DFN D + + + K +++ +A + + D+ + A Sbjct: 739 DFN----AYAKEDPI-NVLTAAGYINQDEKARNADGSAKHSYLFGGLVGSLDHVLATPGA 793 Query: 267 YKFLIQ------ESFSEI-----LYNEDDIKSR---GKRLSDHCPISIDYDF 304 + S + YN + R SDH P+ + D Sbjct: 794 DSVVTGADIWNINSVESVALEYSRYNSNVTNYYAPDQFRASDHDPVVVGLDL 845 >gi|322433843|ref|YP_004216055.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9] gi|321161570|gb|ADW67275.1| Endonuclease/exonuclease/phosphatase [Acidobacterium sp. MP5ACTX9] Length = 1139 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 31/195 (15%) Query: 58 RQYAKNL------------DADIVFLQEMGSY----NAVAKVFPKNTWCIFYSTERLINH 101 YA+ L D+V ++E+ + + A++ Y+ N Sbjct: 556 AAYARRLTKLSLAIRTVLNSPDVVTIEEVENQSVANDIAAQINSDAGVTNLYTAFSTDNK 615 Query: 102 SKR-DSNNDIHTAIAVRKKNVRVLQQSY-------PLLGAKDSFSRAG---NRRAVELLV 150 + I ++ + Y P G+ + + ++ Sbjct: 616 TYYTQDGTGISVGFLIKNTVDNLGVTQYGAGETFTPTSGSLTTLNDRPWLVLSAGIKRAA 675 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-QAQWLKDWITQKKESLVPFVIAG 209 + I V+ H+K+ L + + S L + QA+ + +I ++ + + G Sbjct: 676 GVKDYPITVVVNHMKA---LTGQSSATTNSTRLKKELQAEDIAKFIQTQQAAGKHVISGG 732 Query: 210 DFNRKINYLGNNDDF 224 DFN G ND Sbjct: 733 DFNAFEFSDGYNDTL 747 >gi|254512323|ref|ZP_05124390.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium KLH11] gi|221536034|gb|EEE39022.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium KLH11] Length = 336 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIR VL L+ A+ A +R+ S+N LS + L ++ ++R + Q Sbjct: 1 MIRALVL-----LLLPFAAQADTLRIASFNTE-LSRKGPGLLLRD-IQRDDPQVEAVVQV 53 Query: 61 AKNLDADIVFLQEMG 75 DIV LQ + Sbjct: 54 LAATRPDIVALQGID 68 >gi|298482489|ref|ZP_07000675.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|298271468|gb|EFI13043.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 316 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 95/327 (29%), Gaps = 43/327 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQ---KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ +L + + C + S+N+ + + + +R Y ++ Sbjct: 3 LKSLLLITLVTIAFCGCQSNYQPTTFTVASYNLRNANGNDSLHGN-GWGQR----YPVIA 57 Query: 59 QYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + D DI QE + + + P + + + Sbjct: 58 KMVQYHDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKTQGEHSAIFYRTDKFDII 117 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + + D+ + G + ++H+ + Sbjct: 118 EKGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKKA 171 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPND 232 S L+ ++ + L +P ++ GDFN + Sbjct: 172 RVESAYLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEKC 225 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL---------- 279 + N N ++ ID+ + ++ +++ I+ Sbjct: 226 DFRYATNGTFNSFNPNSFTESR--IDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENAND 283 Query: 280 -YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ +F Sbjct: 284 CPEEIDIKAYQARTPSDHFPVKVELEF 310 >gi|258542179|ref|YP_003187612.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256633257|dbj|BAH99232.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256636316|dbj|BAI02285.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03] gi|256639369|dbj|BAI05331.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07] gi|256642425|dbj|BAI08380.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22] gi|256645480|dbj|BAI11428.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26] gi|256648533|dbj|BAI14474.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32] gi|256651586|dbj|BAI17520.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654577|dbj|BAI20504.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12] Length = 270 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 100/307 (32%), Gaps = 65/307 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNA 79 +++RLV+WNIN+L + LL + ++L D+V LQE + Sbjct: 3 RRMRLVTWNINSLRLR----------------LPLLEKLVRHLAPDVVCLQETKVPDP-- 44 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 +FP++ + L + +A+ ++ P+ + + Sbjct: 45 ---LFPEDG------VKALGFEHLHYRGMKGYNGVAILSRHPLKPVTQTPVW-----YGK 90 Query: 140 AGNRR-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R A + ++ D ++ + D +P + + + +W + Sbjct: 91 EDCRHVAATVCAPEGDVELH--DFYIPAG--GDEPAPETNPKFAHKLAFVEEVTEWFQSR 146 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL----RNK 254 + V+ GDFN I L ++ K + S P+ + R+ Sbjct: 147 PLNRT--VLVGDFN--IAPLEHDVWSHKQLLKIVS-HTPPETERLNRWLQTGFVDAMRHF 201 Query: 255 IPID---YFVMDQNAYKFLIQESFSEI--LYNEDDIKSRGKRL------------SDHCP 297 +P D Y + + ++ D+ + SDH P Sbjct: 202 VPADEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTVVREARDWESPSDHVP 261 Query: 298 ISIDYDF 304 + +D+ Sbjct: 262 VVVDFSL 268 >gi|253756379|ref|YP_003029519.1| surface-anchored DNA nuclease [Streptococcus suis BM407] gi|251818843|emb|CAZ56686.1| surface-anchored DNA nuclease [Streptococcus suis BM407] Length = 1039 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 92/326 (28%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 677 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 678 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 736 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 737 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 796 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY 217 L S + L P ++ L I ++ + V+ GDFN Sbjct: 797 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYEFT 856 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N ++ + Sbjct: 857 KTI-----EILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLFERYAFD---- 907 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 908 MVHVNSAFMEEHGRASDHDPLLVQLD 933 >gi|262197113|ref|YP_003268322.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262080460|gb|ACY16429.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 247 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 93/293 (31%), Gaps = 67/293 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 S A +R S+NI Q W+ +V R+ + L D I+ LQE+ S Sbjct: 10 SAAPPLRAASYNI----HQFCGHRWRLNVGRSVAALRAL-------DVPILALQEVLS-- 56 Query: 79 AVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 +VFP ++W ST + H + + H N + + Sbjct: 57 --GRVFPRRGLVGPNPSSW---LSTALGMQHIAHPTVSAEHGEY----GNAILTRLPVLD 107 Query: 131 LGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D R A+ ++ + + V+ H F + Q Sbjct: 108 SGLWDLALGWREPRNALYAVLATDAGPLRVVTTH-----FGLRSSERIN--------QVY 154 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L D I Q ++ +P ++ GDFN + + + R +E + Sbjct: 155 RLLDHINQ--DTELPTLLLGDFN---------EW-----SRHGLVTRAVEEHFATHAPLA 198 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + +PI F E +Y R SDH P+ + Sbjct: 199 SYPAVLPI-----VPLDRIFWRPSGLVERVYRARGTLFRRA--SDHRPVIAEL 244 >gi|226531290|ref|NP_001144669.1| hypothetical protein LOC100277695 [Zea mays] gi|195645474|gb|ACG42205.1| hypothetical protein [Zea mays] gi|238007716|gb|ACR34893.1| unknown [Zea mays] Length = 373 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 46 PTEEPFKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93 Query: 79 AVAKVFPKN 87 A +K PKN Sbjct: 94 AGSKGAPKN 102 >gi|195620344|gb|ACG32002.1| hypothetical protein [Zea mays] Length = 207 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 46 PTEEPFKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93 Query: 79 AVAKVFPKN 87 A +K PKN Sbjct: 94 AGSKGAPKN 102 >gi|144897972|emb|CAM74836.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 262 Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+V+WNIN++ + + LLRQ + L D++ LQE+ V ++ Sbjct: 1 MRVVTWNINSIRLR----------------FDLLRQVVERLTPDVICLQEI---KVVDEL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + L + +A+ + ++ R R Sbjct: 42 FPADE------CRSLGFPHIAFHGMKGYNGVAI------LSKRPIRETMTPSWCGRDDRR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 L+ +++ +I L + + + + + L + + DW + Sbjct: 90 H---LVAKLDEAEIHCLYV--PAGGDIPDPQQNDKFA-HKLDF-LRQVTDWYAGTYKPGD 142 Query: 204 PFVIAGDFN-----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK--- 249 ++ GD N +++ + ++ + + R Sbjct: 143 RVILTGDLNVAPLETDVWSHKQLLKVVSHTPIEVDLLDRMQASLGWVDAMRRFIPPSERL 202 Query: 250 --NLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + P +D+ + L S + + SDH P Sbjct: 203 YTWWSYRSPDWEKNDRGRRLDHVWVTPALGDTLR--SVEVLR-----ECRSWTQPSDHVP 255 Query: 298 ISIDYD 303 + ++ D Sbjct: 256 VLVELD 261 >gi|194699264|gb|ACF83716.1| unknown [Zea mays] Length = 166 Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 46 PTEEPFKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 93 Query: 79 AVAKVFPKN 87 A +K PKN Sbjct: 94 AGSKGAPKN 102 >gi|315178934|gb|ADT85848.1| extracellular nuclease-related protein [Vibrio furnissii NCTC 11218] Length = 877 Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 104/377 (27%), Gaps = 98/377 (25%) Query: 22 QKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQE 73 +R+ S+N +N + G ++ R S+ + LDADIV L E Sbjct: 474 GDLRIASFNVLNYFNSPYGGDANQHGDNRGASNLTEFSLQQAKIVNAILRLDADIVGLME 533 Query: 74 MGSY-----NAVAKVFP---------KNTWCIFYSTERLINHSKRDS---NNDIHTAIAV 116 + + A+ ++ K + + ++ I T + Sbjct: 534 IENNGFGEGAAIRQLVDQLNERLDDKKKRYQFVAVDSNQDGQTDEKDSVGSDAITTGVIY 593 Query: 117 RKKNVRVLQQ---SYPLLGAKDSFSRAGN---------RRAVELLVEI--NGKKIWVLDI 162 R K V++LQ P A + + G R + ++ + I V Sbjct: 594 RDKVVKLLQSRVIPMPSQQAPEVLNEEGKVIEDGQNYQRDTLAPTFQVKGGNETITVAVN 653 Query: 163 HLK---SFCFLDSLENTY----------SPSCSLLSQQAQ-WLKDWITQKKESLVPFVIA 208 HLK S C+ D+ + SC L + + + VI Sbjct: 654 HLKSKGSACWEDAAPVSEGGQGGEDADLQGSCENFRVAGAVALGEALAKIDGHK---VIL 710 Query: 209 GDFNRK--------INYLGN---------------------NDDFWKTIDPNDSLIRFPK 239 GD N + DD L Sbjct: 711 GDMNSYGKEDPMLVLTDYTPEKYGKVIQAARNTVIGDQPQFGDDGAVITQGFGYLSAMEL 770 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSEILYNED-----DIKSR 288 + +D+ ++ + ++ L++ + D+ Sbjct: 771 AHKDNSWSYSYNDEVGALDHLLVSDSLKLRVVDAMDWHINGGESTLFDYNDEYKGDLPKY 830 Query: 289 G--KRLSDHCPISIDYD 303 R SDH P ++ + Sbjct: 831 ADHFRASDHDPAVVELN 847 >gi|126336177|ref|XP_001368612.1| PREDICTED: similar to DNase1-Like III protein [Monodelphis domestica] Length = 316 Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 6/108 (5%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ F+ GDFN +Y+ + + + + + K Sbjct: 179 RQWKPENFIFMGDFNAGCSYVPKKSWKEIRLRMDPKFVWLIGDNEDTTVKGTT---KCAY 235 Query: 258 DYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ + Sbjct: 236 DRIVLQGQKINSSVVPDSASIFDFQKAYRMTEEEALGISDHFPVEFEL 283 >gi|319780945|ref|YP_004140421.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166833|gb|ADV10371.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 289 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 83/276 (30%), Gaps = 56/276 (20%) Query: 66 ADIVFLQEM----------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI- 114 AD++ LQE+ + + P + + ++ S S D+ + Sbjct: 30 ADVIALQEVTRNNPRNGGRDMVAEIGEALP-DYFAVYGSNFEANIGSHIDNGRAVTKTFQ 88 Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 V + L ++ L ++ R A+E L+E I IHL L+ Sbjct: 89 LGNMVLSRTPIHLSRNLLLPRSRSFEMMNFQRGALEALIETPLGFIRFYSIHLDHRSPLE 148 Query: 172 SLENTYSPSCSLLS--QQAQWLKDWITQ----KKESLVPFVIAGDFN------------- 212 +L+ + L + + + FV GDFN Sbjct: 149 RASQIQFLRQRMLNYALEGGALSG-VAEIGLPELPHPEAFVGMGDFNMLAGSPEYVELAG 207 Query: 213 ---RKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + D D ++ + + + +++ R IDY + Sbjct: 208 RPDHEFGMPLTADFAVDAALRLNATGDDLISWVDPKQPTDPSRHKR----IDYIFTSAS- 262 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + S + + + SDH P+ ++ Sbjct: 263 ----LARSLQRLWVDRKAVG------SDHLPVWVEL 288 >gi|307329665|ref|ZP_07608823.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] gi|306884723|gb|EFN15751.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] Length = 259 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 90/301 (29%), Gaps = 64/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE + Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCVQETKCAESA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP Y R + + + +A V K + + P G D Sbjct: 42 FP-------YEPLRELGYEAAVNATGRWNGVALVSKAGLTDVTVGLP--GGPDYDGDQEP 92 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + + + +++ + + Y + + L+ + Sbjct: 93 RA-----IGATCGPVRLWSVYVPNGREIGHPHYDYK------LRWLEALRTAVAGDAAGD 141 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------NANKN 250 PF + GDFN ++D W + E+++ K Sbjct: 142 RPFAVLGDFN----VAPTDEDVWDRSAFDGLTHVTDLEREALAALREAGLSDVVPRPLKY 197 Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302 R DY + I + ++ + + R SDH P+ +D Sbjct: 198 DRPFTYWDYRELGFPKNRGMRIDLVYGNEVFAKAVGDAYVDREERKGKGASDHAPVVVDL 257 Query: 303 D 303 + Sbjct: 258 E 258 >gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51] Length = 250 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 92/307 (29%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + ++ + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINIDEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|229169798|ref|ZP_04297495.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228613648|gb|EEK70776.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 352 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 101/315 (32%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T + T + + +N ++D LQE+ Sbjct: 56 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLTNMLSFLQNENSDFTLLQEVDI 115 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---------------NV 121 + + F N S + + + V K Sbjct: 116 KS--HRSFDVNEHEFLKKGLPDYASSFGKNYDTKWVPVPVTKPMGNAEGGLSTFSKYTVQ 173 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 + P + +R VE + +N K + ++++HL + D Sbjct: 174 TATRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKYVRLVNVHLSA---YDEGGKIR--- 227 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQA++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 228 ----KQQAEYLKEYMNECYQNGDYVILGGDWNQLLSNVQLSDPKFVKERPEWLVELPKDF 283 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D K ID F++ N + D Sbjct: 284 ADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 334 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 335 LKFEN---SDHNPVS 346 >gi|94499690|ref|ZP_01306227.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] gi|94428444|gb|EAT13417.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] Length = 271 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 82/275 (29%), Gaps = 60/275 (21%) Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 L ADI+ LQE+ A +V P + I + + H +A N Sbjct: 24 QLKADIIGLQEV---KAAPEVVP-------VADIEAIGYKADIHSQKAHYGVANLSLNPS 73 Query: 123 VL-QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + QQ +P D ++ + NG+ + VL+ F + Sbjct: 74 IECQQGFPGDTDDDQKRFIHSQYKL-----NNGEILHVLN-----GYFPQGENRQHETKF 123 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG-----NNDDFWKTIDP------ 230 + LKD++ + V+ GD N ++ N W + Sbjct: 124 PAKRKYYADLKDYLNKHLSPDNHIVVMGDMNVALHDEDIGIGEQNRKRWLRTEKCAFLPE 183 Query: 231 -----NDSLIRFPKEKDSRCNANKNLRNKIP----------------IDYFVMDQNAYKF 269 L + + + N R IDY ++ ++ Sbjct: 184 EREWLQGILDWGLADSFRTQHPDTNDRYSWFDYRSKGFADDPKRGLRIDYILLSKSLMSK 243 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L + D ++ SDH PI ++ + Sbjct: 244 LK-------TADIDYDIRGMEKPSDHAPIYVELNL 271 >gi|329889440|ref|ZP_08267783.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] gi|328844741|gb|EGF94305.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] Length = 251 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 78/265 (29%), Gaps = 57/265 (21%) Query: 53 DYTLLRQYAKNLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTE--RLIN 100 D + + D+V LQE + +A+A+ + S + + Sbjct: 20 DVHRIADVIAEHEPDVVCLQELDVGRARTGWVDQADAIAQ-------RLAMSVQFHPAMK 72 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 + I T + V + P L R A+ V+ +G + +L Sbjct: 73 VEAELYGDAILT----HRPERLVRAAALPTLPGLKGLEP---RGALWSAVDFDGVVVNIL 125 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWL--KDWITQKKESLVPFVIAGDFNRKINYL 218 + HL Q L +DW+ P ++ GDFN Sbjct: 126 NTHL--GLVPREQR-----------LQVAALVGRDWLGDPMCDG-PTILTGDFN---ATS 168 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 T +D+ R + + + + ID+ + + + Sbjct: 169 ITRPYQALTRRLDDAQRRLGLKPSIKTFPSSFPAIR--IDHCFVSREIR----------V 216 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYD 303 + SDH P+ ID++ Sbjct: 217 TGARTPSSPLARAASDHLPLIIDFE 241 >gi|315644659|ref|ZP_07897790.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] gi|315279918|gb|EFU43217.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] Length = 2086 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 106/342 (30%), Gaps = 89/342 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--DADIVFLQEMG--- 75 A+++R+ ++NI GV K L + + DI+ L E+ Sbjct: 825 AEQLRVATYNIENF--YPGVGSSK---------INKLAESIVSSIKSPDIIGLVEVQDNN 873 Query: 76 ------------SYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---- 116 SY+A+ K T+ F + + N+ +I Sbjct: 874 GEQNNGTTAADLSYDALIKAIKAAGGPTYS-FTDIDPVNNNDGGAPGANIRVGFLYNPDR 932 Query: 117 --------RKKNVRVLQQSYPLLGAKDSFSRA----------GNRRAVELLVEINGKKIW 158 KK +Y + +++ +R+ + E G+K+ Sbjct: 933 VQLSDSVNNKKGSSTDSVAYDAAKDQLTYNPGRIDPQNPAFNASRKPLAAQFEFRGEKVI 992 Query: 159 VLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQ------WLKDWITQKKESLVP--FVIA 208 V+ H KS D + +LS +AQ + ++ + V+ Sbjct: 993 VIANHFNSKSG---DQGPFGNTQP-PVLSSEAQRHQIAAVVNGFVKSVVTANPDANVVVL 1048 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR------NKIPIDYFVM 262 GD N ++ L + K N +D+ ++ Sbjct: 1049 GDLND-----------FQFTQTATILKGNELDNLIDTLPLKEQYTYTYDGNSQVLDHILV 1097 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +N L + + ++++ D + R+SDH P+ D Sbjct: 1098 SKN----LTRSTQVDVVHLNADFPASKGRVSDHDPVVAQIDL 1135 >gi|296445860|ref|ZP_06887812.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256688|gb|EFH03763.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 266 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 104/300 (34%), Gaps = 57/300 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN V L V D+ L+Q+A D++ LQE NA Sbjct: 1 MKITTWNIN------SVRLRIPLV----VDF--LKQHA----PDVLCLQETKCRNAE--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + + +A+ V + LL +D R Sbjct: 42 FPYADF------RAIGYEHFAINGQKGYHGVAI------VSKHPLELLDIRDFCETGDAR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + + G I + + ++ + D + T +P + +K+W+T+++ + Sbjct: 90 H-VSVGLPNGGTPITIHNFYVPAG--GDEPDVTINPKFAHKLGFLDEMKEWVTRERITDG 146 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK-----DSRCNANKNLRNKIPID 258 V+ GD N I L + K + S +K D+ + R + Sbjct: 147 RVVLVGDLN--IAPLEQDVWSHKALLQTVSHTPVEVQKLGAVFDAGRWIDAMRRFVPEQE 204 Query: 259 --YFVMDQNAYKFLIQESFSEI--LYNEDDIKSR------------GKRLSDHCPISIDY 302 Y A + + + ++ + + +R SDH P+++ Sbjct: 205 KLYTWWSYRASDWTKSDRGRRLDHVWTSQALSTELLEMNVLREARSWQRPSDHVPVTVAL 264 >gi|163841804|ref|YP_001626209.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] gi|162955280|gb|ABY24795.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] Length = 267 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 93/315 (29%), Gaps = 83/315 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WN+N+L R +D + + + D D++ +QE N Sbjct: 1 MKIATWNVNSL--------------RARAD--RVEDWLRRTDIDVLAIQETKCKDENFPW 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKDSF 137 ++F N + + +A+ K + P G Sbjct: 45 ELFENNGYEVA------------HFGFSQWNGVAIASKVGLDDVERTFPGQPAFGKPGVE 92 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R + G ++W L + D +L+++A+ W+ Sbjct: 93 PEQEGR---AIAATCGGVRVWSLYVP-NGRALDDPHMPYKLEWLRVLNEEAK---GWLA- 144 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKT---IDPNDSLIRFPK-------------EK 241 K+ + GD+N +DD W ID + P+ + Sbjct: 145 -KDPNAQIALVGDWN----IAPQDDDVWDVKYFIDEGLTHFSAPERAAFQAFEAAGFTDV 199 Query: 242 DSRCNAN---------KNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + K LR ID+ + + + D + + Sbjct: 200 VRPSHPGPGVYTYWDYKQLRFPKKEGMRIDFIMASPAL-------AARVVHTEIDREERK 252 Query: 289 GKRLSDHCPISIDYD 303 GK SDH P+ + Sbjct: 253 GKGASDHAPVIAELS 267 >gi|262383588|ref|ZP_06076724.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294486|gb|EEY82418.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 348 Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 115/363 (31%), Gaps = 85/363 (23%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY 54 ++ ++ L+FF P + A +++++N+ ++ + L + T S Y Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 55 -TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKN-----TWCIFYSTERLINH 101 L+Q AK + A ++ L E+ + + ++ + + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSPDP-- 117 Query: 102 SKRDSNNDIHTAIAV-RKKNVRVLQQSYPLL--GAKDSFSRAGNR-RAVELLVEINGKKI 157 I+ A+ R + + +S P+ G K +R + G + Sbjct: 118 ------RGINVALLYQRDQFFYLRHESIPIRFSGNKHKLTRDILHVYGKIIT----GDTL 167 Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 V H S + + L + L + +++ + +I GDFN Sbjct: 168 DVFVCHFPSRYGGEKESEKDRFDAARTLRGSSDSL---LLIREKPQI--LIMGDFN---- 218 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDS-RCN---------------ANKNLRNKIPIDYF 260 D I + + DS C ++K +D Sbjct: 219 -DTPQDRSISEIFAAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQI 277 Query: 261 VMDQN-----AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPIS 299 +++++ + +I ES + SDH P++ Sbjct: 278 IVNRDLITQESSMHIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLT 337 Query: 300 IDY 302 +D+ Sbjct: 338 VDF 340 >gi|289805075|ref|ZP_06535704.1| hypothetical protein Salmonellaentericaenterica_11707 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 131 Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 31/157 (19%) Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 + + + I V+ +HL L ++ + Q L W+ ES P ++ Sbjct: 6 ITPPMLNRPIHVMCVHL-------GLRESHRQA------QLTMLAGWVNALPES-EPVLV 51 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 AGDFN D K P ++ + + +P+ +D+ Sbjct: 52 AGDFN---------DWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYV 100 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K S + + LSDH P+S + Sbjct: 101 KNANASSPGALP------LRNWRHLSDHAPLSAEIHL 131 >gi|257066091|ref|YP_003152347.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] gi|256797971|gb|ACV28626.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] Length = 274 Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 80/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SY 77 ++ +SWNI++L+ + + R LL KN + D++ LQE S Sbjct: 1 MKFISWNIDSLNAALTSDSKRAVMSRD----VLLT--IKNENPDVIALQETKLPANGPSK 54 Query: 78 NAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V K+ F + ++ S+ S + + V++ + L + Sbjct: 55 KHVEKLSEFFPDYDYVWISSRPGARKSYAGTMTLYKKGLDVKESFPEIGAPDTMDLEGRI 114 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + ++ G ++ L L ++ L Sbjct: 115 LTLEFEDFYFTQVYTPNAGGELKRLP----------------------LREEWDKLYADY 152 Query: 196 TQKKESLVPFVIAGDFN--RK---INYLGNN----------------------DDFWKTI 228 + + P + GDFN + + + NN D ++ + Sbjct: 153 LAELDKNKPVIATGDFNVAHEEIDLAHPENNHMSAGFTDEERRGFTNLLNRGFTDTFRHL 212 Query: 229 DPN--DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + N + + + + N R IDYF++ + +I + I Sbjct: 213 NKNLEGAYTWWAQRVKTSKINNSGWR----IDYFLVSDRLMEDVIDSTI---------ID 259 Query: 287 SRGKRLSDHCPISIDY 302 S ++ DH PI ++ Sbjct: 260 SGDRQ--DHTPIMLEI 273 >gi|313472632|ref|ZP_07813121.1| putative endonuclease-exonuclease-phosphatase family protein [Lactobacillus jensenii 1153] gi|313448964|gb|EEQ68414.2| putative endonuclease-exonuclease-phosphatase family protein [Lactobacillus jensenii 1153] Length = 327 Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 52/190 (27%), Gaps = 39/190 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K + D F QE+ + + + F N + + + S + + + A + + Sbjct: 114 IKKQNPDFAFFQEIDTNS--TRSFGVNQVKMAENAFDDMGSSFAQNFHSAYIAFPLNNPH 171 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV-----------------EINGKKIWVLDIH 163 L S + V + N K++ +++ H Sbjct: 172 GFARS-GILALSKYHIDSSERRKYFVSSSLIEKFVDLDRCFNVMRLPVKNDKELVLINSH 230 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---- 219 + + + + +Q L + + + + GDFN Sbjct: 231 MSA--YDKGGLSK--------KKQLALLNHVMKAEIQKGNYVICGGDFNHAFGTKYVAHF 280 Query: 220 -----NNDDF 224 +D Sbjct: 281 KSEQKQHDWL 290 >gi|118361193|ref|XP_001013827.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295594|gb|EAR93582.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 279 Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 64/265 (24%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAI 114 LR+ D D + LQE+ + + + +F + ++S+ L+ Sbjct: 57 LRKIFLQFDPDFICLQEV-TQDFLQLIFSDDQICDKYYFSSSSLVQAY------------ 103 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 +V +L + YP+ F R + ++ IN I + HL+S +D Sbjct: 104 -----DVLILSK-YPIPFKCRYFPSEMGRNLLFGVITINDIDISIGTTHLES---IDY-- 152 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-----FWKTID 229 N C Q ++D +ES ++ GDFN N W + Sbjct: 153 NDDYRLC-----QLTAIEDQFKSYQES----ILMGDFNFAKKSEDQNIPEGYYDVWHALH 203 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE----------SFSEIL 279 PN+ + S+ + D ++ + + + S+ Sbjct: 204 PNEEGHTM---QASQQYPSIRF------DRIIL-KQSENWKPSHIELIGRDPLPSYQSKQ 253 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + +I + SDH + ++ F Sbjct: 254 FAPFEIITP----SDHYGLYLELSF 274 >gi|306822270|ref|ZP_07455651.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|309802827|ref|ZP_07696929.1| endonuclease/exonuclease/phosphatase family protein [Bifidobacterium dentium JCVIHMP022] gi|304554432|gb|EFM42338.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|308220580|gb|EFO76890.1| endonuclease/exonuclease/phosphatase family protein [Bifidobacterium dentium JCVIHMP022] Length = 362 Score = 42.7 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 72/268 (26%), Gaps = 56/268 (20%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIF 92 ++ L +V + +D + K+ +++ LQE +A+ + + Sbjct: 134 TDDGYARLMTCNVYKGRADAQEIVDLVKSEHVEVLALQETTDDFVDALNRA-GIADY--- 189 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 + +S+ S++ ++ N D S A + Sbjct: 190 ------LPYSQVSSSDGVY-------GNGLWSATPLGDPADDDVDSSASFMPGGTVSFNG 236 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + + +H S + S L + K + ++ GDFN Sbjct: 237 GTTPVRFVSVHTTSPTRSRWQQWKRS------------LDELARMKFNTDTRYIFMGDFN 284 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---NANKNLRNKIP--IDYFVMDQNAY 267 ++ D + I ++ ID+ V+D Sbjct: 285 ATYDHTPFRDFL------GNRFIDASRQAAGGFVFSWPADIDYVPTFAGIDHIVLDSGML 338 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDH 295 +KS SDH Sbjct: 339 A--------------GQVKSEKIDGSDH 352 >gi|257455364|ref|ZP_05620599.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] gi|257447326|gb|EEV22334.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] Length = 270 Score = 42.7 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 85/310 (27%), Gaps = 84/310 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAVA 81 R VS+NIN L + L + D++ LQE + Sbjct: 3 RFVSFNINGLRARPH----------------QLEAIRDIIAPDVIGLQETKVHDDAFPLQ 46 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 V + + + H +A+ R+K + V Q+ +P Sbjct: 47 SV-------------QQLGYHVEFFGQKSHYGVALLSRQKPIFV-QKGFPTDSDDAQRRF 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + NGK I VL+ F + + + L D+I Q K Sbjct: 93 IHARY------DFNGKYIDVLN-----GYFPQGENRKHETKFPMKRKFYADLTDYILQLK 141 Query: 200 ESLVPFVIAG-------DFNRKINYLGNNDDF-------------WKTIDPNDSLIRFPK 239 ++ G DF+ I+ W L + Sbjct: 142 AENRSMILMGDMNIAPLDFDIGISEDSVKRWLKNGTCSFLPEEREWYQALLATDLHDTYR 201 Query: 240 EKDSRCNANKNLRNKIP-----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + A + ID+ +M + L S Y+ Sbjct: 202 ALYADGQALSWFDYRSKGFDDEPKRGLRIDHILMTPDLADKLNGAGVS---YD----LRA 254 Query: 289 GKRLSDHCPI 298 ++ SDH PI Sbjct: 255 MEKPSDHAPI 264 >gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] Length = 788 Score = 42.7 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 95/316 (30%), Gaps = 53/316 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYN 78 K+ + ++NI S + T L Y+ + DI+ ++EM N Sbjct: 489 DKLTVATYNIENFSAN--------KKETTDEKVKALA-YSIKYNLKMPDIIGVEEMQDNN 539 Query: 79 ------------AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 + ++ + + N +I Sbjct: 540 GSINDGTTDASLSAKRIIDAVLEIRGPKYE-YVEIAPHNNLDGGAPGANIRVGFFYNPSR 598 Query: 120 -----NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++L ++ +G ++ + R+ + G+ + V+ HL S + Sbjct: 599 VKLVAVPKLLDKNVVRIGDENPLFES-TRKPLAAEFTFQGQNVVVVANHLNSKIGDATPF 657 Query: 175 NTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 P ++ L + QKK + P V+ GD N + + Sbjct: 658 GKVQPLVLKSEEKRVQLAQEVNNFVQGIQKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGT 715 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + L PKE + N +D+ ++ N + + +I Sbjct: 716 NLKNMLNTVPKENRYT---YIHEGNAQVLDHILVTNNIAPYTSVDPVH----LNSNIMKE 768 Query: 289 GKRLSDHCPISIDYDF 304 R+SDH P+ D Sbjct: 769 HGRVSDHDPVLAQIDL 784 >gi|229188637|ref|ZP_04315676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594826|gb|EEK52606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 263 Score = 42.7 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSATIAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FEGQVDRL----MERVDSNKLAFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|260641834|ref|ZP_05413661.2| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260624593|gb|EEX47464.1| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 611 Score = 42.7 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 92/304 (30%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + ER H+ I + Sbjct: 53 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLT 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + C SL Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYC-----------------CTHMSLTEKDR 151 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K ++ P +AGD N DF K + N ++ P Sbjct: 152 ------MKSLEVVKSFV---APYKKPLFLAGDMN-----AEPESDFIKELQKNFQMLSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 K+ + K IDY L + L + + SDH PI Sbjct: 198 KQSTYPASDPK-----ETIDYI-------TALKSNANGFALISSQVLDEPMA--SDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|302404834|ref|XP_003000254.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] gi|261360911|gb|EEY23339.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] Length = 298 Score = 42.7 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 88/299 (29%), Gaps = 31/299 (10%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ A VR+V++N+ + + + K+ R T L + D+ + LQE+ Sbjct: 8 SSGEALPVRVVTFNVRYAAPRP-MPNEKSWQVRCPKICTQLDFITRGHDSPFLCLQEVLY 66 Query: 77 YNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRKKNVRVLQQSYPLLG 132 + + W + S V K P G Sbjct: 67 PQLLDIQAGLGEGWGYVGIGRDDGDRLGELSPVFYRVGTWKCEVFKNYWLSETPDRPSKG 126 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + R E + + G++ V+ H D L + L + Sbjct: 127 WDAALPRIVTVG--EFVHKRTGQRAVVMSTHF------DHLGVVAREQSAKLILRIAA-- 176 Query: 193 DWITQKKESLVPFVIAG-DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 W ++ S VI G DFN + K D+ P EK N Sbjct: 177 QWAEERASSPPAAVILGGDFNSNPSDNAYKSMVAKGSGMADAHALVPSEKRYG-NELTYT 235 Query: 252 RNKIP------IDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYD 303 P ID+ + + + + + G LSDH P+ D + Sbjct: 236 SFDEPDQQAVRIDFIFV-------KVPSNVKVTTFGVLTNRFDDGVFLSDHRPVVADLE 287 >gi|153806752|ref|ZP_01959420.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] gi|149131429|gb|EDM22635.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] Length = 366 Score = 42.7 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 92/309 (29%) Query: 24 VRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAV 80 + + ++N++ + E G S + + +NL ADI+ QE + Sbjct: 110 LTVATYNVDGFNREHTGYSCKE------------IAAQMRNLKADILCFQEFGIDDE--- 154 Query: 81 AKVFPKNTWCIFYSTE-----RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 F ++ C S + + + +++K+++ + Sbjct: 155 ---FGVDSLCTALSDWPYHYIPSSPERQHLLQLAVFSRYSIKKEHLII------------ 199 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-----------TYSPSCSLL 184 + +GN ++ +E+NG+ I + + HL++ + + L Sbjct: 200 -YPNSGN-CSLWCDIEVNGRMIRLFNNHLQTTEVSRNKRKLEKELRQDNSQRAKRAALTL 257 Query: 185 SQ-----------QAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTID 229 + QA ++ ++ S P ++ GDFN + + D Sbjct: 258 ADGLHENFRKRAVQANFINQLVS---ASPYPTLVCGDFNSLPSSYVYHTVKGDKLLDGFQ 314 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + K ++ + IDY + D S Sbjct: 315 TGGHGYMYT---------FKYFKHLLRIDYILHSPELKGL--------------DYFSPD 351 Query: 290 KRLSDHCPI 298 SDH P+ Sbjct: 352 WEYSDHNPV 360 >gi|82701739|ref|YP_411305.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82409804|gb|ABB73913.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 250 Score = 42.7 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 73/254 (28%), Gaps = 54/254 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 LR + L+ADI+FLQE+ ++ + + I T A Sbjct: 27 QLRDSLRALNADIIFLQEV---------VGEHKGHGARFENWPESPQYEFLADSIWTDFA 77 Query: 116 VRKKNVR--------------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 K V +L+ + A SR E+ + + + + Sbjct: 78 YGKNAVYDEGHHGNAILSRYPILRWDNVDVSAHRFESRGLLH--CEIGIPQWRENLHCIC 135 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +HL S +Q Q L+ I + P VIAGDFN ++ Sbjct: 136 VHL--------GLFKRGRS-----RQLQLLEKHIEELVPQDAPLVIAGDFN---DWREVA 179 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + +R + + +D + + Sbjct: 180 SRILVQRLALAEVFELTEGRPARTYPSTLPLFR--LDRIYVRGFHIEKAQVHQGH----- 232 Query: 282 EDDIKSRGKRLSDH 295 ++SDH Sbjct: 233 ------PWSKISDH 240 >gi|163746501|ref|ZP_02153859.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] gi|161380386|gb|EDQ04797.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] Length = 260 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 85/272 (31%), Gaps = 53/272 (19%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ D+V LQE+ S + FP+ ++ + Sbjct: 16 AALPEWLDEAQPDVVVLQEIKSVDEA---FPRE----MLEER---GYNVETHGQKSFNGV 65 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ K +D +R +E V + + V ++L + + + Sbjct: 66 AILSKLPLEDVTRGLPGDDEDDQARW-----IEATVVGDDMALRVCGLYLPNGNPVPGPK 120 Query: 175 NTYSPS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDD------- 223 Y + + L +A+ L PF++AGD+N + + + Sbjct: 121 YDYKLAWMARLQARAEAL-------LAEETPFLMAGDYNIIPQAEDAAKPDSWREDALFR 173 Query: 224 -----FWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQNAYKFL 270 W+ + F + N N I ID+F++ L Sbjct: 174 PESRAAWRRLVNLGLTDAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPTVADRL 233 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D++ R + SDH P+ ++ Sbjct: 234 RDCQI------DRDVRGRD-KPSDHVPVWVEL 258 >gi|67902602|ref|XP_681557.1| hypothetical protein AN8288.2 [Aspergillus nidulans FGSC A4] gi|40739836|gb|EAA59026.1| hypothetical protein AN8288.2 [Aspergillus nidulans FGSC A4] gi|259481080|tpe|CBF74285.1| TPA: SacI domain and endonuclease/exonuclease/phosphatase family protein (AFU_orthologue; AFUA_7G03680) [Aspergillus nidulans FGSC A4] Length = 1106 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 67/252 (26%), Gaps = 60/252 (23%) Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA----VRKKNVRVLQQSYPL 130 S A + + S A VR+ +R ++ Sbjct: 667 NSRAAAR---GSPKYVLLRSG--------------QLVGTALMIYVREDILRDIKNVEGS 709 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDSLENTYSPSCSLLSQQAQ 189 + AGN+ + E + ++ + HL + D N Y C L Q Sbjct: 710 VKKTGLSGIAGNKGGCAIRFEYSNTRLCFVTAHLAAGFANYDERNNDYETICQGLRFQR- 768 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINY----------------LGNNDDFWKTIDPNDS 233 + E + GDFN +I L +ND + + Sbjct: 769 ------NRFIEDHDAVIWLGDFNYRIGLPNQTVRDLVRQSNYQKLYDNDQLNLQMLAGRA 822 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-------YKFLIQESFSEILYNEDDIK 286 + + + + + D + + + Y D+ Sbjct: 823 FQFYSEGLVT---FPPTYKYDVGSDTYDTSDKSRIPAWCDRILWKGPDLRQSGYGASDM- 878 Query: 287 SRGKRLSDHCPI 298 RLSDH P+ Sbjct: 879 ----RLSDHRPV 886 >gi|325860217|ref|ZP_08173342.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325482304|gb|EGC85312.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 366 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 73/265 (27%), Gaps = 59/265 (22%) Query: 59 QYAKNLDADIVFLQEM-GSYNAVAKVFP-----------------KNTWCIFYSTERLI- 99 Y ADIV LQE S +++P + S ++ Sbjct: 126 DYILKSKADIVCLQEAQASMEGTDRIYPALKKHYPYFRLMVKKKPGADHMVLLSRYPVLW 185 Query: 100 -NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 + SN++ A V K + L + L + + + + + Sbjct: 186 QDSIPYGSNSNQSVAYMVDIKGTKTLVVNNH-LESNGLSTDDKEEFKTLVKGNMGTGEAK 244 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-RKINY 217 HL + + QA+ + ++ + + VP ++ GDFN ++Y Sbjct: 245 DESFHL----LRKLGSVSVRRA-----PQAEAVARYVRKYLDRKVPVILCGDFNDSPLSY 295 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQE 273 + + N +K ID+ + Sbjct: 296 THR-----------TIVRELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDDFE------ 338 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPI 298 Y S SDH PI Sbjct: 339 -----PYGAKVDNSVTA--SDHYPI 356 >gi|299743291|ref|XP_001835660.2| endonuclease/exonuclease/phosphatase [Coprinopsis cinerea okayama7#130] gi|298405590|gb|EAU86231.2| endonuclease/exonuclease/phosphatase [Coprinopsis cinerea okayama7#130] Length = 617 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 108/323 (33%), Gaps = 69/323 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------- 76 + +N+ L+ L + + Y + D +FLQE+ Sbjct: 307 ITFGDYNVENLAPN-SRHLPTIAKH--------IVDYLRT--PDFLFLQEIQDDSGPTDD 355 Query: 77 ------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 NA+ + + F + + +I TA + K V L Sbjct: 356 GTVSANLTLATLANAIRDL-SGVRYS-FAQVDPVDGQDGGQPGGNIRTAF-MFKPEVLKL 412 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEIN------------------------GKKIWVL 160 P+ G++D + G R +L G++++ + Sbjct: 413 VNGSPVGGSRDPVAVEGRRGKPKLNFNPGRIEPAGAVWNATRKPLVAHWETSFGQELFTV 472 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQK--KESLVPFVIAGDFNRK 214 ++HL K + + + S+ Q + +++ ++S V+AGDFN Sbjct: 473 NLHLSSKGGSSSTQGDARPPVNNPIESRTAQVSSVANFVKAVLDRDSNANIVVAGDFNEF 532 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 I+ + + D R P+E+ +N +D+ ++ + + ++ Sbjct: 533 IHTRSVYKPIVQHLTDIDEAARIPQEERYS---YLFDQNAQQLDHALVSSSIRRRKVE-- 587 Query: 275 FSEILYNEDDIKSRGKRLSDHCP 297 F I N S +R+SDH P Sbjct: 588 FEHIHINT-WAPSLSERISDHDP 609 >gi|291240985|ref|XP_002740396.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like [Saccoglossus kowalevskii] Length = 1297 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 94/287 (32%), Gaps = 64/287 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WN+N + + + +Y L Q +AD+ FLQE S +A Sbjct: 4 ISVATWNVN--------GCRDSLKRHSVFNYLKLNQ-----NADLCFLQETHSLHA---- 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + W I +A+ L + S S R Sbjct: 47 -DEARWQIV-----WRAPIAFSHGTTTSAGVAI-------LVSPNKNITINSSRSIVNGR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + +NG + +L+++ + S L + L Sbjct: 94 L-LHVNATVNGSRYHLLNVYAPTNGVERSAFFN------TLKKTINELDK--------ND 138 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 ++ GDFN +N + + +T +PN + + +R R F + Sbjct: 139 CIIVGGDFNCTLNPSLDRN---RTFEPNAPSTQVLQNIVNRFKFIDAWRR------FHGN 189 Query: 264 QNAYKFLIQESFSEI--LYNEDDIKSR--------GKRLSDHCPISI 300 A+ + +S+S + Y + + S+ LSDH PI + Sbjct: 190 TRAFTWSRGDSYSRLDRFYITNTLASKIISVLIDSASTLSDHKPIKL 236 >gi|229015755|ref|ZP_04172735.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229021962|ref|ZP_04178522.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228739337|gb|EEL89773.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228745543|gb|EEL95565.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 263 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 81/267 (30%), Gaps = 41/267 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHS----------- 102 L + + D D++ LQE+ V F + Sbjct: 20 IKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKAYNIIWD 79 Query: 103 KRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 D++ +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTFFISENKDTTY-WKTRKIVSATIAYNDKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEG 184 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFS 276 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 185 YEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQS----KTVHSSK 240 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 241 VIFNGTN-----RNVISDHFGVEMQLD 262 >gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba] gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba] Length = 250 Score = 42.7 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DADI +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADIFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ ++ +SF ++ + S L+ + W + ++ + Sbjct: 76 VSYGINIEEHDKEGRIITCEFESFYLVNIYTPNSQQALSRLNYRMSWEVEFRRFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNTGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ + L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNSLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302] gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302] Length = 250 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 90/306 (29%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G D+ Q + L+AD LQE A Sbjct: 1 MKFISWNVNGLRACVG------------KDF---SQSFETLNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S TAI RK+ + V Sbjct: 45 LQFPGYTSYWNYADKKGYSG--------TAIYARKEPIAVT------------------- 77 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201 + ++ + + V+ + +F + L + W + + Sbjct: 78 --YGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYRMTWEDDFQAYLHRLDE 135 Query: 202 LVPFVIAGDFN---------------RKINYLGN-NDDFWKTIDP--NDSLIRFPKEKDS 243 P ++ GD N R + D + + D+ E+ + Sbjct: 136 QKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDKMTQLLSHGFTDTFRTLYPEQVT 195 Query: 244 RCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + IDYF++ L S ++ SDHCPI Sbjct: 196 YSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIFG-----------SDHCPI 244 Query: 299 SIDYDF 304 +D + Sbjct: 245 EVDLEL 250 >gi|284034607|ref|YP_003384538.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813900|gb|ADB35739.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 266 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 86/303 (28%), Gaps = 67/303 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM----GSYNA 79 +R+++WN+ + +R + T+LR+ DAD++ LQE+ A Sbjct: 1 MRVLTWNVWW--------RFGPWQRRADAILTVLRE----ADADLIGLQEVWAQGNDNQA 48 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F +R + + A+ + + L G + + Sbjct: 49 AQLASELGLHWTFEPLANPEPWQRRLGDRSVAIGNAILSRRPIDDRAVLELPGPEQRSAL 108 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + V HL++ + C +Q + L ++ + Sbjct: 109 FASTGGVP-----------FFTTHLEA------PITASAIRC----EQVRALAGFVAEHS 147 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF--------------------WKTIDPNDSLIRFPK 239 + P VI GDFN L ++D+ W+ +P Sbjct: 148 RAAHPPVITGDFN----ALPDSDELRLFSGVRTAPAVPGLVLIDAWEYAEPGQPA--ATW 201 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + +DY + + G SDH + Sbjct: 202 DTANP-HVAATFTPSARVDYIHVGVPGRN---GAGHVTAVRRTGAAPVDGVWPSDHAAVV 257 Query: 300 IDY 302 + Sbjct: 258 AEL 260 >gi|209525496|ref|ZP_03274035.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328] gi|209493995|gb|EDZ94311.1| Endonuclease/exonuclease/phosphatase [Arthrospira maxima CS-328] Length = 501 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 33/216 (15%) Query: 21 AQKVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++ +++ ++N+ L + + + + T + + ADI+ QE+ Sbjct: 174 SKTLKIGTFNLYNLVLPNRTYYETRQYTPELYHQKKTWISHQLATMQADIIGFQEIFDPE 233 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-VLQQSYPLLGAKDSF 137 A+ ++ S + + + + + + + +P D Sbjct: 234 ALQEILAATE-----SYHNAHLITTNPTRDKPVVGLCSKLPIISWQIYDKFPPESQIDIE 288 Query: 138 S-----RAGNRRAVELLVEINGK-KIWVLDIHLKS-------FC-FLDSLENTYSPSCSL 183 +R + + +++ + V +HLKS D +E SL Sbjct: 289 GTMIPINHFSRPVLAVNIQLQDSLQCTVFVVHLKSQRPQIPEGVDSQDPVEKAKGKVRSL 348 Query: 184 LSQQAQW-------LKDWITQKKESLVPFVIAGDFN 212 L + A+ LK W S P +I GDFN Sbjct: 349 LRRSAEATALRCIMLKTW----SHSQNPIIILGDFN 380 >gi|167573681|ref|ZP_02366555.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia oklahomensis C6786] Length = 614 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 103/326 (31%), Gaps = 69/326 (21%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K L+AD++ L E+ Sbjct: 284 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKNYDEFVRQDAKIVSALKALNADVIGLMEIE 343 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ + W + D A+ + ++ Sbjct: 344 NDGYGELSAVRQLAAKLGDGWRVV------------DPGIARLGGDAISVALIYDSRKVK 391 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C- 181 P+ A NR+ + + + V HLKS C + ++ C Sbjct: 392 PVGEAATLAIDDKNRQPLAQTFRPVGGSRAVTVAVNHLKSKNCPSATGDDLDQGDGQGCW 451 Query: 182 -SLLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + ++ A + DW+ + + VP ++ GD +N D +T++ + Sbjct: 452 NATRTRAASKVADWL-ARTPTGVPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLV 505 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFS 276 + + + +D+ + Y + + Sbjct: 506 SSKIGAGAYSYVYNGEAGYLDHALASSALASRVKAVHDWHINADEPIALQYTLAYKTAEQ 565 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDY 302 + Y D R SDH P+ ID Sbjct: 566 QRTYYAPD----AYRSSDHDPVLIDI 587 >gi|148653450|ref|YP_001280543.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] gi|148572534|gb|ABQ94593.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] Length = 341 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 16/133 (12%) Query: 50 TTSDYTL----LRQYAKNLDADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLIN 100 + S+Y L Q +N ADI QE+ A+ + F + ++ + Sbjct: 38 SQSEYQRKLNGLHQLLRNAKADIYAFQEVWDEKALQDLAVKLGFEPSQVLAPMASNEPSS 97 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDS----FSRAGNRRAVELLVEIN 153 + A+ + K + Q ++ L D ++ NR + + +++ Sbjct: 98 QLTKGKGAQDTPALGIISKFNVIDWQLLTNFDPLAVVDIPDQGLYKSFNRPPLVVTLDVY 157 Query: 154 GKKIWVLDIHLKS 166 G+ I V+ HLKS Sbjct: 158 GQPITVITAHLKS 170 >gi|262372803|ref|ZP_06066082.1| nuclease [Acinetobacter junii SH205] gi|262312828|gb|EEY93913.1| nuclease [Acinetobacter junii SH205] Length = 812 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 89/294 (30%), Gaps = 71/294 (24%) Query: 62 KNLDADIVFLQEM-------GSYNA-VAKVFPKN-TWCIFYSTERLINHSKRDSNNDIHT 112 K++DAD+ L E+ S A + K + + I + + I Sbjct: 506 KSIDADVYGLMEIANNGYGSDSAVAYLTKALGPDWKYVI-------PESINQLGTDVIAV 558 Query: 113 AIAVR-KKNVRVLQQSYPLLGAKDSF----SRAGNRRAVELLVEINGKKIWVLDIHLKS- 166 AI K+ V + + LG K+ S V N HLKS Sbjct: 559 AIIYNSKRVQPVNKAAVLDLGEKNRSTIAQSFKPVHGGQIFTVIPN---------HLKSK 609 Query: 167 FCFLDSLEN-----TYSPSC--SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINY 217 C L + C + + L WI + + ++ GD N Sbjct: 610 SCSGVDLNSLDADQKDGQGCWNPTRVKAVEQLTQWIAKNPTQVKNPNILLLGDMN----S 665 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAY 267 D N ++ + NA + +D+ + D N Y Sbjct: 666 YAKEDPILAFEKANYKVLLNDSKIGEGTNAYSYVFGVSSNSDGYGGAGNLDHAIADANLY 725 Query: 268 KFLI--------QESFSEILYNEDDIKSRGKRL---------SDHCPISIDYDF 304 K ++ + + + YNE+ K L SDH P+ +D D Sbjct: 726 KRVVKAFAWHINADEPTVLDYNEEYKTDEQKELFFAADPYRSSDHDPVIVDLDL 779 >gi|257093975|ref|YP_003167616.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046499|gb|ACV35687.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 294 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 54/302 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R+ ++NI +GV+ + R L DADIVFLQE+ N + Sbjct: 2 KLRVATYNI-----HKGVTGIRG-RPRIHDVRLALEAI----DADIVFLQEVQDRN--ER 49 Query: 83 VFPKNTWCIFYSTE--RLINHSKRDSNNDI-----HTAIAV--RKKNVRVLQQSYPLLGA 133 + + + ++ R + H A+ R + Sbjct: 50 LAHHPGYPFGTQLDFLASGAYAHRAYGMNAVYPHGHHGNAILSRHRITESANHDISD--- 106 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + G AV L G+++ ++ +HL L +QA +L D Sbjct: 107 -HALEKRGLLHAVTRLGRGRGREVHLICVHL-------GLIKRSRV------RQATFLAD 152 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLR 252 ++ ++ + P +IAGDFN ++ D + + + + ++ L Sbjct: 153 FVQREVPASAPLIIAGDFN---DWQQRVDGLLRDRLGVQEVAVAATSPPPEGGLLDRLLS 209 Query: 253 NKIPIDYFVMDQNAYK------FLIQESFSEILYNEDDIKSRG----KRLSDHCPISIDY 302 + D + +L + + D++ R SDH P+ + Sbjct: 210 WRPASD--AQSGVSRTFPSFAPWLTLDRIYVRGFRVLDMQVPQGLAWARCSDHAPLIAEL 267 Query: 303 DF 304 + Sbjct: 268 EL 269 >gi|253573925|ref|ZP_04851267.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846402|gb|EES74408.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] Length = 258 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 96/289 (33%), Gaps = 46/289 (15%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVAK 82 +++++N L RT + + + K DADI+ +QE + Sbjct: 4 KIMTFN---LRLNVASDGENAWPYRTKA----VAEVIKRHDADIIGIQEGLHDMLTDLEP 56 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + P+ W N + + V K L ++ LGA+ S+S + Sbjct: 57 LLPEYAWI--GEGREGGNKGEYAAILYKKKNWTVGKAGHFSLSETPEELGAR-SWSTSHP 113 Query: 143 RRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ-KKE 200 R + + G + + HL D + + + +++ + + + + Sbjct: 114 RMCTWVTFKSQTGAEFAAFNTHL------DHISEEAQ------QKGMELIRERMKEFRTQ 161 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRFPKEKDSRCNANKNL----RNK 254 + +P V+ GDFN + + ++ + +++ A + + Sbjct: 162 TGLPVVLTGDFN-----VEPANAVITGLEQEGYRNAYSVLQQEKKEVGATVHHFLGGESG 216 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 PIDY + + D G+ SDH P+ + Sbjct: 217 EPIDYIFVSPD---------LQIQNVRVDRELYEGRYPSDHYPVIAEVS 256 >gi|227114004|ref|ZP_03827660.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 381 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 85/275 (30%), Gaps = 45/275 (16%) Query: 59 QYAKNLDADIVFLQEMGSYNAVA----KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTA 113 + L+ADI+ E+ + + + +V + + + + Sbjct: 120 KIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPNDPRGIDVACLTRY-- 177 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDS 172 R+ Q + A F +R +E+ ++ + I++L H KS Sbjct: 178 --------RIAQLRTHIFDAGKRFDPVFSRDCLEVTLDAGLKQPIYILCNHFKS--QSGQ 227 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFN-------RKINYLGNNDDF 224 E QA+ + + + Q + + VI GD N + L + D Sbjct: 228 TEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSLSDL 287 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK---------------- 268 IDP + + K +DY + ++ Sbjct: 288 HPVIDPERPEK---ERYTYYFSGGKKGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNID 344 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +E + ++ S SDH + ++ D Sbjct: 345 KIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|196005147|ref|XP_002112440.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] gi|190584481|gb|EDV24550.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] Length = 267 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 71/250 (28%), Gaps = 22/250 (8%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNA-VAKVFPKNTWCIFYSTERLINHSKRDSNN--DIHT 112 L Q ADI+ L+E+ Y+ + + F+ + D NN D Sbjct: 20 SLMQEILRSKADIICLEEVDHYSDFFQPILTSLDYIGFFVPKPDSPCLLYDENNGPDGCA 79 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 KK +L + L ++ +E KKI ++ HLKS Sbjct: 80 LFFSAKKFSLILHDQFILRKNDGDTNQVAIVILLETTFLPESKKICIVCTHLKSHSSEWC 139 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 S LL++ Q + +P +I GDFN N + Sbjct: 140 ENIRKEQSAFLLNKVGQLIN-------FEYIPIIICGDFN-----TDPNTPTYTNFANFQ 187 Query: 233 SLIRFPKEKDSRCNAN-KNLRNKIP------IDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + + IDY K + + + + Sbjct: 188 PCHLKSAYALNGEEPKFTTWKFRPKCQVCHTIDYIWFSDKFLKRVQFLAIPTMSEIGPNA 247 Query: 286 KSRGKRLSDH 295 SDH Sbjct: 248 LPAEHYPSDH 257 >gi|21232830|ref|NP_638747.1| hypothetical protein XCC3401 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767099|ref|YP_241861.1| hypothetical protein XC_0763 [Xanthomonas campestris pv. campestris str. 8004] gi|188990191|ref|YP_001902201.1| putative nuclease / phosphatase [Xanthomonas campestris pv. campestris str. B100] gi|21114655|gb|AAM42671.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572431|gb|AAY47841.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167731951|emb|CAP50137.1| putative nuclease / phosphatase [Xanthomonas campestris pv. campestris] Length = 245 Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 80/261 (30%), Gaps = 59/261 (22%) Query: 47 VKRTTSD-YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 KRT+ D L + DIV LQE ++ F T + + N+ Sbjct: 31 SKRTSLDSIAKLAG-----ERDIVGLQE-SDPGSLRSGFTNQTH--YLAERAGFNYWSHQ 82 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF--SRAGNRRAVELLVEINGKKIWVLDIH 163 N + +A + L L +D R G R + + + V H Sbjct: 83 PNRRMG-GVA---SSANGLLSKLEPLEVQDHALPGRIGGRGILLAKFGQGREGLAVAVAH 138 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L + + L+ A+ L D ++ GDFN + Sbjct: 139 LSLG---------ANSRMAQLAFIAELLSD--------HPNVMLMGDFN-----CVADRP 176 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYN 281 + +L R + + C + + ID+ ++ +I+ + Sbjct: 177 EMQ------ALYRHTRLQPPSCVVHTFPSWRPDRAIDHILVSD---SLVIEHT------- 220 Query: 282 EDDIKSRGKRLSDHCPISIDY 302 ++ SDH + +D Sbjct: 221 ----EAIPAAFSDHLAVGMDL 237 >gi|313816882|gb|EFS54596.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA1] gi|315100096|gb|EFT72072.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA2] Length = 317 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 48/195 (24%) Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWITQ 197 + V++ + V ++L D +++Q + + + + Sbjct: 136 GRYIEVDLADTPLTVACLYLPKGATPDPANEK------TIAKQDRKMAFLTGFRDHLVRR 189 Query: 198 KKE---SLVPFVIAGDFN---------------RKINYLG-NNDDFWKTIDPNDSLIRFP 238 ++E F++ GDFN R +L F + P+ + Sbjct: 190 RQECTTQGRHFLVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVR 249 Query: 239 KEKDSRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + IDY + I D S Sbjct: 250 AQHPDTNGPYSWWSWRGKAFVNDAGWRIDYHLASPELASKAI-------TAEIDRDPSYS 302 Query: 290 KRLSDHCPISIDYDF 304 +R SDH + +DYD Sbjct: 303 ERTSDHAAVVVDYDL 317 >gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735] gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735] Length = 250 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 89/306 (29%), Gaps = 81/306 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L G D+ Q + L+AD LQE A Sbjct: 1 MKFISWNVNGLRACVG------------KDF---SQSFETLNADFFCLQETK-MQAGQLD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + +++ +S TAI RK+ + V Sbjct: 45 LQFPGYTSYWNYADKKGYSG--------TAIYARKEPIAVT------------------- 77 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK--DWITQKKES 201 + ++ + + V+ + +F + L + W + + Sbjct: 78 --YGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYRMTWEDDFQAYLHRLDE 135 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDP---NDSLIRFPKEKDS 243 P ++ GD N R + + + D+ E+ + Sbjct: 136 QKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREKMTQLLSHGFTDTFRTLYPEQVT 195 Query: 244 RCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + R + IDYF++ L S ++ SDHCPI Sbjct: 196 YSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIFG-----------SDHCPI 244 Query: 299 SIDYDF 304 +D + Sbjct: 245 EVDLEL 250 >gi|262406033|ref|ZP_06082583.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646465|ref|ZP_06724105.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806878|ref|ZP_06765703.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|262356908|gb|EEZ05998.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638200|gb|EFF56578.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445907|gb|EFG14549.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 611 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 87/304 (28%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 4 MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 52 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + E H+ I + Sbjct: 53 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLA 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + C SL Sbjct: 109 KQVPLRLQTIPLPGREEARTLILAEFEDYIYC-----------------CTHLSLTEEDR 151 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I P +AGD N DF K + + ++ P Sbjct: 152 ------MKSLEIVKSLI---ASCKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 197 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ K IDY + S + SDH PI Sbjct: 198 EKHTYPA-----PDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 243 Query: 299 SIDY 302 ++ Sbjct: 244 LVEL 247 >gi|237717266|ref|ZP_04547747.1| metallophosphoesterase [Bacteroides sp. D1] gi|229443249|gb|EEO49040.1| metallophosphoesterase [Bacteroides sp. D1] Length = 608 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 87/304 (28%), Gaps = 63/304 (20%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + + + Sbjct: 1 MKKIFLLISAILFIFPVQAQHTLRLMTYNIKNANGMDDICS-----------FQRVANVI 49 Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS---NNDIHTAIAVRK 118 N D+V +QE+ S + + + E H+ I + Sbjct: 50 NNASPDVVAIQEVDSMT--RR--SGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLA 105 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K V + Q+ PL G +++ + + C SL Sbjct: 106 KQVPLRLQTIPLPGREEARTLILAEFEDYIYC-----------------CTHLSLTEEDR 148 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + +K I P +AGD N DF K + + ++ P Sbjct: 149 ------MKSLEIVKSLI---ASCKKPLFLAGDMN-----AEPESDFIKELQKDFQILSNP 194 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ K IDY + S + SDH PI Sbjct: 195 EKHTYPA-----PDPKETIDYIAASKQNATGFAVISARVVN---------EPMASDHRPI 240 Query: 299 SIDY 302 ++ Sbjct: 241 LVEL 244 >gi|223982777|ref|ZP_03633005.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM 12042] gi|223965277|gb|EEF69561.1| hypothetical protein HOLDEFILI_00279 [Holdemania filiformis DSM 12042] Length = 656 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 80/280 (28%), Gaps = 66/280 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +R+ +WNI + D + + D V +Q++ N Sbjct: 36 TLRVGTWNI---------------AAKNHPDTQAMAELFAQHHLDAVGIQKVDVLNDRNP 80 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 V V + +K + + + + + S PL ++ Sbjct: 81 VDMV-----QSFVNEDYPYAHFAKGRDFANGAFGVGILSRYEPLAVSSIPLESTGSRATK 135 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R +++E +G +I + + HL S L + + + I + Sbjct: 136 TLER----VVIEKDGVQIALYNTHL---------------SWENLDLRRRQIAQVIERVN 176 Query: 200 ESLVPF-VIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 V + +I DFN Y D+F + + + + ++ Sbjct: 177 ADPVEYKIITADFNTDQHAYEYSMFRDNF--NLANGYNGMWYDTYREGD----------- 223 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 D + I DI+ LSDH Sbjct: 224 -------DPSMQVLTIDNVLCTKNMRITDIQRVESELSDH 256 >gi|222054058|ref|YP_002536420.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] gi|221563347|gb|ACM19319.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] Length = 258 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 66/206 (32%), Gaps = 29/206 (14%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 L+ P ++ ++++N+ + + + + + D DI Sbjct: 2 LIDIFQPSHPAMTIHFSVMTYNV-----HSCIGMDGKVSP------LRIAEVIAHYDPDI 50 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V LQE+ + + + + HS + A+ + L + Sbjct: 51 VALQELDAGLTRSDLVDQAHLIAKSLEMSYHFHSSIQVEEGEY-GNAILSRFPIHLVKGG 109 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L R AV VE+ G ++ V+ HL N C QA Sbjct: 110 -ALPTHPVNKNLERRGAVWAEVELKGIRVQVVATHL--------GLNRRERMC-----QA 155 Query: 189 QWLK--DWITQKKESLVPFVIAGDFN 212 L DW+ + P ++ GDFN Sbjct: 156 NALSGPDWLG-HPDCRPPVILCGDFN 180 >gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99] gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99] Length = 250 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + ++ + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|289768186|ref|ZP_06527564.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698385|gb|EFD65814.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 293 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 92/320 (28%), Gaps = 73/320 (22%) Query: 8 ALVFFLVPCTASVAQ------KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 AL+ V ++A +R+ ++NI+ + +GV D Sbjct: 16 ALLTLAVTAQPALAADRGHSVPLRIATYNIHAGAGSDGVF-----------DLDRQAAAL 64 Query: 62 KNLDADIVFLQEMG------------SYNAVAKVFPKNTWCIFYSTERL-INHSKRDSNN 108 + LDAD++ LQE+ + ++ + ++ YS + + +R+ Sbjct: 65 RALDADVIGLQEVDVHWGARSQGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREYGV 124 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSF 167 + + VR L +D E+ +++ G + V HL Sbjct: 125 AVLSRFPVR----SATNHEITRLSTQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL--- 177 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDF 224 + P+ Q + I ++ + + GDFN + Sbjct: 178 ------DYRADPAVR--RAQVADTRR-IMARERAELPGAHQFLLGDFNAEPAAPELA-PL 227 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 WK + + + IDY ++ Sbjct: 228 WKELSDAGAGTPATYPAQAPVK---------RIDYVTAGKDVRIRRTA------------ 266 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+ D Sbjct: 267 -VPEEPAASDHRPVVADVSL 285 >gi|149916430|ref|ZP_01904949.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] gi|149809700|gb|EDM69554.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] Length = 305 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 16/157 (10%) Query: 24 VRLVSWNINTLSEQE---GVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++N+ +L + + ++ +R D L Q ++LDAD++ LQE+ Sbjct: 1 MRIATFNVQSLRLRGDHLSGAHDDDTPERADPSLDHRDRLLTAQVIRDLDADVLALQEVF 60 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ + + I + N+ IA+ + S+ L D Sbjct: 61 DSAALDHF--HDHYLIPAGMPPYPHRICLPGNDGRGLDIALLSRMTPGDVVSHATLRPAD 118 Query: 136 SFSRAGNRRAVELLV------EINGKKIWVLDIHLKS 166 R E + + + + +H K+ Sbjct: 119 LGLAVPPRLRAETPIFRRDCLRVELAGLTLFLVHFKA 155 >gi|153805804|ref|ZP_01958472.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] gi|149130481|gb|EDM21687.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] Length = 368 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 85/264 (32%), Gaps = 58/264 (21%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 Y N ADI+ LQE YNA + ++ + S + R Sbjct: 132 SYLVNSKADIICLQE---YNAAQ----NKKYLTEADIKKALKAYPYYSVRRQN-----RS 179 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS--------FCFL 170 YP+L + +V+ ++ +N + +++ HL+S + Sbjct: 180 DVQLACFSKYPILSVSPIDYESTYNGSVKYVLAVNNDTVTLINNHLESNKLTKEDRGMYE 239 Query: 171 DSLENTYSPSCSL-LSQ--------------QAQWLKDWITQKKESLVPFVIA-GDFNRK 214 D +++ + L Q QA + IT+ S P +IA GDFN Sbjct: 240 DMIKDPNAKKVKTGLRQLVKKLAEASAIRASQADSVNKAITE---SKYPTIIACGDFN-D 295 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 + + + +D F + + + ID ++ N + Sbjct: 296 GSISYTHRILTQKLDD-----AFTQSGKGLGISYNQNKFYFRIDNILISPNLKAY----- 345 Query: 275 FSEILYNEDDIKSRGKRLSDHCPI 298 + R + SDH PI Sbjct: 346 --------NCTVDRSIKASDHYPI 361 >gi|108797936|ref|YP_638133.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119867032|ref|YP_936984.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] gi|108768355|gb|ABG07077.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119693121|gb|ABL90194.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] Length = 255 Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 10/52 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++NI L SV D L Q + LDADIV LQE+ Sbjct: 1 MRVATFNI----------LHGRSVHDGEVDVDRLAQSIRELDADIVALQEVD 42 >gi|311032107|ref|ZP_07710197.1| endonuclease/exonuclease/phosphatase [Bacillus sp. m3-13] Length = 264 Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 91/278 (32%), Gaps = 62/278 (22%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN--------------------TWCIFY 93 + + K D++ LQE+ S + A+V N + + + Sbjct: 20 IQHIARAIKEQAYDVIALQEV-SQSIDAQVVKGNIKQNNFGLVLQQELEKLGVSDYELVW 78 Query: 94 STERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN 153 + + + I T +++K + + +S D + R+ V + VE+ Sbjct: 79 -DFAHMGYDTFEEGLAILTRHSIKKTHSFFVSKSTDS----DFW---KTRKIVGVTVEVQ 130 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 G+++ HL + D E Q + L +K + P+ + GDFN Sbjct: 131 GEEMSFYTCHL--GWWSDEEEPA--------KYQMKQLI----EKVKGTEPYFLLGDFNN 176 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL------RNKIPIDYFVMDQNAY 267 + G +F + EKDS + + + ID + Sbjct: 177 SAHIKGEGYEFLTSTAGLHDTYLLASEKDSGVTVEGKIAGWDENKQDLRIDLILASS--- 233 Query: 268 KFLIQESFSEILYNEDDIKSRGKR--LSDHCPISIDYD 303 S + + + + R +SDH + + + Sbjct: 234 ----PPSVT----SSKVVFNGQNREVVSDHYGVEVTLE 263 >gi|239995602|ref|ZP_04716126.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC 27126] Length = 232 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 60/267 (22%) Query: 49 RTTS-DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN 107 R DY + Q+ N AD+V LQEM + S K Sbjct: 11 RDKKHDYKRIGQFLANSGADVVLLQEMDTRP---------------SERSTAQDVKDICA 55 Query: 108 NDIHTAI---AVRK-----KNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIW 158 + I A+R+ N + + D R + ++ + Sbjct: 56 ENTFKLIPSPAIRESDGWYGNAILTRFDVLAHDTLDVSQNGRQPRNVQIVELKTEKTPLT 115 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFNRKINY 217 V++ H L+ S Q L + ++ K + P V+AGDFN Sbjct: 116 VVNTH-------KGLKKLERRS------QFSLLHEHLSLKMKEKQIPLVLAGDFN----- 157 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + + ++K + +F + ++ + + Sbjct: 158 ----EWQFFSKAFKALNELLLQQKVGATFPS----------HFPVFALDRVWVSDDIKVK 203 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K+R LSDH P+ +D + Sbjct: 204 ACRKLKNAKTRI--LSDHLPVLVDIEL 228 >gi|159185011|ref|NP_354980.2| hypothetical protein Atu2011 [Agrobacterium tumefaciens str. C58] gi|159140285|gb|AAK87765.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 319 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 82/299 (27%), Gaps = 69/299 (23%) Query: 70 FLQEMGSYNAVA--------KVFPKNTWC---------------IFYSTERLINHSKRDS 106 LQE+ + A+ ++ + E Sbjct: 25 CLQEVDNMAALQAFEYGYLYRMVGNGYLQKYLVEGNDSRGIDVAVVMREETRDGDKIEVV 84 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + H A+ R ++ P L A + + R +E+ + I GK + + H K Sbjct: 85 DIKSHAALTYRNLDLF-----NPALAATNQIDDKIFKRDCLEIDLRIGGKPLTLYVTHFK 139 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN--------- 212 S + + + +A ++ I + F I GD N Sbjct: 140 SMTNARDAVDARIATMPIREAEAMAVRRIIENRWGVGNTRNKNFAICGDMNDYQERVAIS 199 Query: 213 --RKINY---LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-------IDYF 260 R+ Y + I D + P + + ++ P +DY Sbjct: 200 GDRRSGYSFTPVEEERSALDIFTADGFVVNPMTRRDVMDRWTLYHSRGPQEQHLCQLDYV 259 Query: 261 VMDQNAYKFLIQE---------SFSEILYNEDDIKSR------GKRLSDHCPISIDYDF 304 + + F + +++ + SDHCP+ + D Sbjct: 260 WLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDL 318 >gi|77163744|ref|YP_342269.1| exodeoxyribonuclease III xth [Nitrosococcus oceani ATCC 19707] gi|76882058|gb|ABA56739.1| Exodeoxyribonuclease III [Nitrosococcus oceani ATCC 19707] Length = 237 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 90/275 (32%), Gaps = 68/275 (24%) Query: 57 LRQYAKNLDADIVFLQE---MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + + + D++ LQE + + F + + YS ++ + Sbjct: 1 MVDWLEIHQPDVLALQETKLVDDSFP-QEAFKEIGYHAAYSGQKT------------YNG 47 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +A+ Q +L + + R + + V+ I +L++++ + + S Sbjct: 48 VAI-----LCRQAPKDILTDLPNLVDSQRRI-LGVTVDD----IRLLNLYVPNGSEVGSK 97 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPF---VIAGDFNRKINYLGNNDD-FWKT-- 227 + Y WL +E+LV + ++ GDFN +D W Sbjct: 98 KYAYK---------LDWLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVHDPDIWHETI 148 Query: 228 ---------------IDPNDSLIRFPKEKDSRCN----ANKNLRNKIP-IDYFVMDQNAY 267 + DS F +E S RN+ ID ++ Sbjct: 149 LCSTPEREALKEILALGFQDSFRLFEQEAQSFSWWDYRGGAFRRNRGLRIDLILIS---- 204 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K L+ + ++ E R R SDH P+ + Sbjct: 205 KALVPKCTGCVIDKE---PRRLTRPSDHAPVIATF 236 >gi|332827055|gb|EGJ99843.1| hypothetical protein HMPREF9455_00267 [Dysgonomonas gadei ATCC BAA-286] Length = 285 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 109/315 (34%), Gaps = 61/315 (19%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 Y+ A+V LV CT S + ++S+NI + + ++ W+ D Q K Sbjct: 6 YLFAVVSLLVSCTRSKPLDLNVMSFNIRYDNPGDSLNSWQ-----YRKDIA--AQTIKAQ 58 Query: 65 DADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 +ADIV QE+ N + P+ I I + + AI +K + Sbjct: 59 NADIVGAQEVLVNQLNDLKASLPE-YNAIGIGRIDGIEKGE-------YCAILYKKDRFK 110 Query: 123 VLQQSY------PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLE 174 ++ + P + + A R A +++E + K+I+ ++ HL + Sbjct: 111 EIKSGHFWLSETPEVIGSKGWDGACERVATWIVLEEISSKKQIFFINTHL-----DHVGK 165 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 +LL Q+ L +P ++ GDFN ++D DP + Sbjct: 166 MARQEGVTLLLQRIGELSK--------GLPVILTGDFN----ATPDSDVIKHVTDPANPN 213 Query: 235 IRFPKEKDSRCNANKNLRN----------KIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + + N + IDY + + + E+ Sbjct: 214 YLMHTKDIAVVKSGTNWTFHGFGQVPLEKREFIDYIFVKPDTKV------LKHTVIPEEL 267 Query: 285 IKSRGKRLSDHCPIS 299 +SDH I+ Sbjct: 268 DSKF---ISDHSAIT 279 >gi|308050255|ref|YP_003913821.1| exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] gi|307632445|gb|ADN76747.1| Exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] Length = 268 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 57/191 (29%), Gaps = 39/191 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ VS+NIN L + L+ D++ LQE + Sbjct: 1 MKFVSFNINGLRAR----------------LHQLQALIDKHQPDVIGLQETKVDDPQFPL 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + + ++ H +AV+K + A Sbjct: 45 EAVEAMGYHVAFHGQK--GHYGVAMLTKQ-VPLAVQKGFATDEED-------------AQ 88 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + + + NG+ + VL+ F + + L + +++ Sbjct: 89 RRMIMVTVADANGQPVHVLN-----GYFPQGENRDHETKFPAKRRFYADLMSHLNTHRQA 143 Query: 202 LVPFVIAGDFN 212 V+ GD N Sbjct: 144 DEQVVVMGDIN 154 >gi|117919355|ref|YP_868547.1| endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] gi|117611687|gb|ABK47141.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. ANA-3] Length = 870 Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 98/383 (25%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDY----TLLRQYAKNLDA 66 + + +R+ S+N +N ++ G + R T + + ++A Sbjct: 455 APSVATKGDIRVASFNVLNFFNDVVGGDTNPSGSNRGALTEEEMLLQRAKIVSAITAMNA 514 Query: 67 DIVFLQEMGS-----YNAVAKVFP--------KNTWCIFYSTERLINHSKRDSNNDIHTA 113 DIV L E+ + +A+ + N + T+ K ++ I Sbjct: 515 DIVGLMEIANNGFGEKSAIKNLVDALNEKQTADNAYSFVEITDEDKYDGKYFGSDAITVG 574 Query: 114 IAVRKKNVRV--------LQQSYPLLGAKDSFSRAGN----------RRAVELLVEINGK 155 + R V + + + G+ R ++ +I+ + Sbjct: 575 MLYRAGKVSLAGAARAIDTPEQHATAGSVTRTKDGKTETNPGNDAYQRHSLAQTFKIHDE 634 Query: 156 KIWVLDIHLKS---FCFLDSLENTYSPS-------CSLLS-QQAQWLKDWITQKKESLVP 204 + V+ HLKS C D + S C+ A+ L + + + Sbjct: 635 NLTVVVNHLKSKGSGCLEDWVNFEESVDPADQQGKCNAFRVSAAKVLGEALK---DVKGD 691 Query: 205 FVIAGDFN--------RKI----NYLGNNDDF---WKTIDPN-------------DSLIR 236 ++ GD N R + D W T+D + Sbjct: 692 LLVIGDMNAYGMEDPIRVLTDYDASKSERDIMTASWTTLDGKVFERQGSKIEKGYGLINL 751 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ------ESFSEILYNEDDIKSRGK 290 K + + +D+ + + + K L+ S L+ + K Sbjct: 752 NTKAHGAGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESNLF--EYGKKFSG 809 Query: 291 RL---------SDHCPISIDYDF 304 L SDH P+ + + Sbjct: 810 ELAKSENAFSASDHDPVIVALSY 832 >gi|228913117|ref|ZP_04076756.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846522|gb|EEM91535.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 263 Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 39/258 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + I+ S Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILC---NRSEKIRSSKVV 242 Query: 278 ILYNEDDIKSRGKRLSDH 295 + +SDH Sbjct: 243 FNGTNRKV------ISDH 254 >gi|227834100|ref|YP_002835807.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|262183414|ref|ZP_06042835.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|227455116|gb|ACP33869.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] Length = 269 Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 73/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN + R LL ++ D D++ LQE + Sbjct: 1 MRIATWNIN------------SVRTRAQRAVDLLAKH----DIDVLCLQETKVADAKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFS-R 139 + F + + + + +A+ K+ +Q +P + Sbjct: 45 EPFEEVGYHV------------TCHGLNQWNGVAILSKEEPEEVQTFFPGQPGFHKDPAK 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A + + G +IW L + + E T L L + + Sbjct: 93 EQAREARAVSARVRGIEIWSLYV-------PNGREITDRHFDYKLDF-LYSLARYAENRT 144 Query: 200 ESLVPFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +S + ++ GDFN R ++ + + L+ + Sbjct: 145 QSKL--LLTGDFNIAPWDEDVWDMSPFRGKTHVTEPERAAFQMLEEAGLVEVTRRFTEE- 201 Query: 246 NANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + K ID+ + + + + D ++ G + SDH Sbjct: 202 DRWTYFDYKSLRFQKNEGMRIDFQLASEPLARLVEGAQV-------DMVERAGDKTSDHV 254 Query: 297 PISIDYD 303 P+ D+D Sbjct: 255 PLIADFD 261 >gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24] Length = 250 Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + ++ + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMNWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNVGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|72160662|ref|YP_288319.1| exodeoxyribonuclease III [Thermobifida fusca YX] gi|71914394|gb|AAZ54296.1| Exodeoxyribonuclease III [Thermobifida fusca YX] Length = 264 Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 88/309 (28%), Gaps = 74/309 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +RL +WN+N + R+ + + + D D+V LQE Sbjct: 1 MRLATWNVN------------SVRARSE----RIAAWLRRSDVDVVALQETKCRDDQFPT 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRA 140 VF + + + +A+ + + +Q +P A Sbjct: 45 AVFTELGYEVA------------HHGLSQWNGVAIASRVGLSDVQIGFPGQPGWGEPEEA 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + + V +++ + +D TY L++ + + W++ ++ Sbjct: 93 EARAISAVC-----GGVRVWSLYVPNGREIDHPHYTYKL--QWLARLREAGEAWLS--ED 143 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----------------KDSR 244 + GD+N I + + + + ++ Sbjct: 144 PKAQIALCGDWN--IAPYDEDVWDMAEFEGRTHVTKPERDAFHAVVDAGFTDVVRPHAPG 201 Query: 245 CNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K ID+ + + D + +GK SDH Sbjct: 202 PGVYTYWDYKGLAFPKRKGMRIDFILASPALAERATDA-------KIDREERKGKGASDH 254 Query: 296 CPISIDYDF 304 P+ D+ Sbjct: 255 APVIADFQL 263 >gi|330503248|ref|YP_004380117.1| exonuclease III [Pseudomonas mendocina NK-01] gi|328917534|gb|AEB58365.1| exonuclease III [Pseudomonas mendocina NK-01] Length = 270 Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 90/315 (28%), Gaps = 80/315 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLQALIEKHQPDVIGLQETKVADEQ--- 41 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 FP+ R + + H +A + ++ L + +P G + Sbjct: 42 --FPEA-------EIRQLGYHVHYHGQKGHYGVALLSRQEPLSLHKGFPGDG-----EDS 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + +G I V++ F + + L+ + ++ + Sbjct: 88 QRRFIYGTFADASGNPITVMN-----GYFPQGESRDHPVKFPAKQRFYADLQQLLVERFD 142 Query: 201 SLVPFVIAGDFN-------------RKINYL---------GNNDDF-----WKTIDPNDS 233 V+ GD N ++ +L + W +D Sbjct: 143 PQQALVVMGDINISPEDCDIGIGEPNRLRWLKTGKCSFLPEEREWLATLKSWGLVDSFRH 202 Query: 234 LIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 L ++ S + + + ID + Q D Sbjct: 203 LNPEVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQQLQARFKDAGI-------DYDLRG 255 Query: 289 GKRLSDHCPISIDYD 303 + SDH PI ++ + Sbjct: 256 MDKPSDHAPIWLELN 270 >gi|326388588|ref|ZP_08210181.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] gi|326206839|gb|EGD57663.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] Length = 261 Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 91/305 (29%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + +WNIN + R + ++ D++ LQE+ + Sbjct: 2 IEIATWNIN------------SVRLR----IDQVERFLTQEKPDVLCLQEI---KCAENL 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ERL S + +A+ V + G +D + R Sbjct: 43 FPREMF------ERLGYGHMAVSGQKGYHGVAI------VSRLPLRETGREDWQANGEAR 90 Query: 144 R-AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 VE+L G +++ ++++ + + + Q+ +L+ + Sbjct: 91 HVGVEIL----GHDLFLDNVYIPAG-----GDVPDREANPKFGQKLDFLERMTRWSEGLD 141 Query: 203 VPFVIAGDFN----------RKI------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GDFN K + + + +D + K + Sbjct: 142 RPTLLVGDFNIAPLECDVYDHKALLKVVSHTPVEVEALGRLAAAHDWVDLGRKHIPAPER 201 Query: 247 ANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + +D+ F E R ++ SDH P Sbjct: 202 NYSWWSYRSYWRAKDQGRRLDHMWASPEVAARSQGHRFVEET-------RRWEQPSDHIP 254 Query: 298 ISIDY 302 + + Sbjct: 255 LITGF 259 >gi|319893216|ref|YP_004150091.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] gi|317162912|gb|ADV06455.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] Length = 623 Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 94/337 (27%), Gaps = 77/337 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNL-DADIVFLQEM-- 74 K+ + S+N+ S + + L ++ DIV + E+ Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353 Query: 75 ---------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + ++ T+ + + + N + +I + Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGF-LYNP 411 Query: 120 NVRVLQQSYPLLGAK-------DSFSRAGNRRA------------VELLVEINGKKIWVL 160 P A + +R R A + + G+++ + Sbjct: 412 ERVTFNDHIPAGDATTSVAYENNQLTRNPGRIAPQDPAFEDVRKSLAAQFDFKGQQVIAI 471 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRK 214 H KS D L ++ P Q + I Q++ + GD+N Sbjct: 472 ANHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYN-- 529 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAY 267 D W + + KN R +D+ ++ ++ Sbjct: 530 -------DFQWSKPLKTFESYGLTNKVK---DVPKNKRYSYVYQGNTQTLDHILVSEHLK 579 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +++ D R SDH PI DF Sbjct: 580 RQTKLD----MIHVNSDFTDMAGRASDHDPILAQIDF 612 >gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] Length = 236 Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 40/133 (30%) Query: 197 QKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSL----IRF 237 Q+ ++ P V+ GD N R + ++ + Sbjct: 117 QELDAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEERAKFRELKAAGFTDSFRYLH 176 Query: 238 PKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 P+E + R K IDYFV+ L ++ Sbjct: 177 PEEVKYSWW---SYRFKAREKNAGWRIDYFVVSDRIADKLQSAEIHNEVFG--------- 224 Query: 291 RLSDHCPISIDYD 303 SDHCP+SI+ D Sbjct: 225 --SDHCPVSIELD 235 >gi|227874170|ref|ZP_03992374.1| endonuclease/exonuclease/phosphatase family protein [Oribacterium sinus F0268] gi|227839991|gb|EEJ50417.1| endonuclease/exonuclease/phosphatase family protein [Oribacterium sinus F0268] Length = 342 Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 17/101 (16%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I + +I GDFN + + ND D+L K N N + Sbjct: 247 IEEIANHNKDSIIIGDFNATMKHGNLND----IKTHIDALEYASKFNSGTWNRNILSFFR 302 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ ++ + Y + + + SDH Sbjct: 303 SRIDHILIPIDK-------------YCVKSVDIQNYKNSDH 330 >gi|126433598|ref|YP_001069289.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] gi|126233398|gb|ABN96798.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] Length = 255 Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 10/52 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++NI L SV D L Q + LDADIV LQE+ Sbjct: 1 MRVATFNI----------LHGRSVHDGEVDVDRLAQSIRELDADIVALQEVD 42 >gi|88803294|ref|ZP_01118820.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] gi|88780860|gb|EAR12039.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] Length = 336 Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 104/319 (32%), Gaps = 66/319 (20%) Query: 1 MIRKYVLALVFFLVPC-------TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD 53 ++ VL +F +++ ++++S+N+ T K V+ T + Sbjct: 69 LLSFLVLIFGWFFASPLYKISENASALNSDLKVMSFNVKTF----DFFNNKKKVENTKNG 124 Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + + A DI+ LQE + + + + + Sbjct: 125 FEFIADQAL----DILVLQE--------------YYQLKKNKLPYPYRYIKLRSKRSKYG 166 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 +A+ K + G+ D S N ++L E + I + + H +S + Sbjct: 167 MAIYSKYKIINS------GSLDLKSTGNNIIFADILKEKD--TIRIYNAHFESLKIKPNE 218 Query: 174 ENTYSPSCSLL--------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 EN + L +QA ++ +K+ +I GDFN Y + Sbjct: 219 ENFGEENSEKLIGRVAQAFKRQASQTALFLNHEKQWKGKKIICGDFN-NTAYS----WMY 273 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 I N + + N + ID+ + D+ A + Sbjct: 274 HEISKNKKDAFIVAGE--GFGKSYNYWFPLRIDFILTDEAA--------------IINQF 317 Query: 286 KSRGKRLSDHCPISIDYDF 304 K+ + SDH PI + ++ Sbjct: 318 KTFTEIYSDHFPIRANINW 336 >gi|254301107|ref|ZP_04968551.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] gi|157811458|gb|EDO88628.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 406e] Length = 624 Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|225012745|ref|ZP_03703180.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] gi|225003278|gb|EEG41253.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] Length = 335 Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 68/257 (26%), Gaps = 55/257 (21%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + DIV QE A F K + IF + Sbjct: 118 AEIEGFINKEQPDIVCFQEYAQNEAPD--FEKYPYKIF----------------KPYVG- 158 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH----------- 163 + + +PLL +K + + + + ++H Sbjct: 159 --SGQIGSCIISKFPLLNSKSISFKESKNGGMYTDFLWKKDTLRLYNVHFESLRIDSKDT 216 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L + + + + +QQ D I E +I D N Sbjct: 217 LIAAEYSQKFRRKINEVFKIQNQQVAQFND-IKNLNEYPE--IICTDLNNNAFSKS---- 269 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + + K + N L+ + ID+ + + + Y Sbjct: 270 -YLNLSRGRKDSFLEKGEGFGATYN-FLKFPLRIDFIMSSPKI---------NILSYKTH 318 Query: 284 DIKSRGKRLSDHCPISI 300 + LSDH PISI Sbjct: 319 KV-----NLSDHKPISI 330 >gi|92115234|ref|YP_575162.1| endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] gi|91798324|gb|ABE60463.1| Endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] Length = 271 Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 87/294 (29%), Gaps = 62/294 (21%) Query: 22 QKVRLVSWNIN---------TLSEQEGVSLWKNSVKRTTSDY--TLLRQYAKNLDADIVF 70 +RL++ N+ + + + ++ D LR Y DIV Sbjct: 14 HSLRLLTCNLQVGIHTSAYHHYLTRSWQHVLPHPKRQGRLDLIGDTLRDY------DIVG 67 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ + + + + + H + N ++ + N + + + Sbjct: 68 LQEVDGGSFRSGHVNQVEY---LAKRGGFPHHYQQLNRNL--GRVAQHSNGLLSRLTPRQ 122 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + R A+ + ++ HL ++Q + Sbjct: 123 VDEYRLPGTLPGRGAIHARFGEGPDALHLVVAHLALGH-------------RTRTRQLDY 169 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + I + L V+ GD N + + + F + L Sbjct: 170 LSEII----QPLRHVVVMGDLNCTPDQINAHQRFCHAL----PLHPVAMPLSYPAW---- 217 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +D+ ++ L E F + + SDH P+++D Sbjct: 218 -QPRRALDHILIS----SALHAERFEVL----------DRLFSDHLPVAVDIQL 256 >gi|84684871|ref|ZP_01012771.1| exodeoxyribonuclease III [Maritimibacter alkaliphilus HTCC2654] gi|84667206|gb|EAQ13676.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2654] Length = 267 Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 79/265 (29%), Gaps = 52/265 (19%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRV 123 D+V QE+ S + + FP+ + + ++ +A+ K+ + Sbjct: 26 QPDVVIFQEIKSVD---ENFPREHFE-------DMGYNVETHGQKSFNGVAILSKRPLED 75 Query: 124 LQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + P + E V + + + ++L + + + Y Sbjct: 76 VTRGLPGAEGTGRDGEDDEQARYIEATVLGDRNAVRICGLYLPNGNPVGDEKFAYK---- 131 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFN---------RKINYLGNNDDFWKTIDPNDS 233 + + L+ + PF++AGD+N N+ +D ++ Sbjct: 132 --LRWMERLEKRAKELLALEQPFLMAGDYNVIPQGIDALHPENW--RDDALFQPESRGAF 187 Query: 234 LIR----FPKEKDSRCNANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSE 277 + +R A + ID+F++ L Sbjct: 188 WRLQNLGLTEAFRARNQAAEQFTFWDFQRGAWQRNDGIRIDHFLLSPQCADLLEDCQI-- 245 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 D + SDH PI ++ Sbjct: 246 -----DKEVRGRDKPSDHVPIWVEL 265 >gi|126442413|ref|YP_001063630.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|167724713|ref|ZP_02407949.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei DM98] gi|217422484|ref|ZP_03453987.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254193781|ref|ZP_04900213.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|126221904|gb|ABN85409.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|169650532|gb|EDS83225.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|217394715|gb|EEC34734.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] Length = 624 Score = 42.7 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|167850682|ref|ZP_02476190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei B7210] Length = 624 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|167587986|ref|ZP_02380374.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 253 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 89/287 (31%), Gaps = 74/287 (25%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSY 77 A+ +R+ ++NI + G +W + + LDAD++ LQE+ GS Sbjct: 16 ARDLRIATYNI-----RGGFGIWHAAAA------DRIAAVIDELDADVIALQEVPLGGSR 64 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLG 132 A ++ H + + + + + R N + + Sbjct: 65 GA-----------------DVLAHLRAATGLNAAAGVTIDTTERRYGNAVLSRCPIRASR 107 Query: 133 AKDSFSRAG-NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 D R R A++ ++ I V+ HL + S +Q Q L Sbjct: 108 TLDLSFRHREPRGALDADIDCGAGLIRVVATHL--------GLSAAERS-----EQVQRL 154 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 +P ++ GD N + + + RF + R Sbjct: 155 LAAFDT---GAMPVILLGDIN---------EWLMRGRALRALVTRFRRAPAPRTFPTLYP 202 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +D + + LI + +R +R SDH P+ Sbjct: 203 LF--ALDRIWIHPG--ELLIDVAVHR--------SARARRASDHYPL 237 >gi|134278080|ref|ZP_01764794.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|134249864|gb|EBA49944.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] Length = 624 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|126455741|ref|YP_001076529.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|242311247|ref|ZP_04810264.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254186048|ref|ZP_04892566.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254264734|ref|ZP_04955599.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|126229509|gb|ABN92922.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|157933734|gb|EDO89404.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|242134486|gb|EES20889.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254215736|gb|EET05121.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 624 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|53716715|ref|YP_105078.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344] gi|53722864|ref|YP_111849.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|67643158|ref|ZP_00441906.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|121597344|ref|YP_991036.1| putative extracellular nuclease [Burkholderia mallei SAVP1] gi|124382710|ref|YP_001025437.1| putative extracellular nuclease [Burkholderia mallei NCTC 10229] gi|126447726|ref|YP_001077497.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|167820854|ref|ZP_02452534.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 91] gi|254177252|ref|ZP_04883908.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|254203011|ref|ZP_04909373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254208344|ref|ZP_04914693.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|52213278|emb|CAH39321.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52422685|gb|AAU46255.1| putative extracellular nuclease [Burkholderia mallei ATCC 23344] gi|121225142|gb|ABM48673.1| putative extracellular nuclease [Burkholderia mallei SAVP1] gi|126240580|gb|ABO03692.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|147746056|gb|EDK53134.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147751031|gb|EDK58099.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|160698292|gb|EDP88262.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 10399] gi|238524427|gb|EEP87860.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|261826943|gb|ABN00602.2| putative extracellular nuclease [Burkholderia mallei NCTC 10229] Length = 624 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|229170375|ref|ZP_04298048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228613072|gb|EEK70224.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 263 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 74/266 (27%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + D D++ LQE+ V F + +I Sbjct: 20 IKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNIIWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTLFVSENKDTTYWKTRKIVSATIAYNDKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEGY 185 Query: 223 DFWKTIDPNDSLIRFP---KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSE 277 ++ D+ + + NK ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQS----KTVNSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|223647596|gb|ACN10556.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 298 Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 7/112 (6%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 + Q+ S +I GDFN Y+ + + S + + Sbjct: 184 VKQRWTSK-NVIIMGDFNADCGYVPKKQWSSIRLRSDTSFLWLTGDTIDT---TVKESTD 239 Query: 255 IPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 D V+ + + S + + + + L SDH P+ I + Sbjct: 240 CAYDRVVLHGDKMIQAVKPTSLDVFDFRQAYGLTELQALAVSDHYPVCITVN 291 >gi|255692701|ref|ZP_05416376.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621535|gb|EEX44406.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 317 Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 92/322 (28%), Gaps = 41/322 (12%) Query: 5 YVLALVFFLVPCTASVA-QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 L C ++ + S+N+ + + + +R Y ++ + + Sbjct: 9 ITLVTTIVFCGCQSNYQPTTFTVASYNLRNANGNDSLHGN-GWGQR----YPVIAKMVQY 63 Query: 64 LDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 D DI QE + + + P + + I + K + Sbjct: 64 HDFDIFGTQECFLHQLKDMKEALPGYDYIGVGRDDGKIQGEHSAIFYRTDKFDIIEKGDF 123 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + + D+ + G + ++H+ + S Sbjct: 124 WLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKKARVESA 177 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLIRF 237 L+ ++ + L +P ++ GDFN + Sbjct: 178 YLVQEKMKELGK------GKNLPAILTGDFNVDQTHQSYNAFVEKGVLCDSYEKCDFRYA 231 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL-----------YNED 283 + + N K ID+ + ++ +++ I+ E Sbjct: 232 TNGTFNSFDPNSF--TKSRIDHVFVSPAFHVKRYGILTDTYRSIVGNGEKENANDCPEEI 289 Query: 284 DIKSRGKR-LSDHCPISIDYDF 304 DIK+ R SDH P+ ++ +F Sbjct: 290 DIKAYQARTPSDHFPVKVELEF 311 >gi|220911600|ref|YP_002486909.1| 5'-nucleotidase domain protein [Arthrobacter chlorophenolicus A6] gi|219858478|gb|ACL38820.1| 5'-Nucleotidase domain protein [Arthrobacter chlorophenolicus A6] Length = 1512 Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 90/290 (31%), Gaps = 51/290 (17%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYN--------AVAKVF------PKNTWCIFYSTERLIN 100 + AD+V L E+ + A+AK+ W N Sbjct: 566 DKIVAAITKTGADVVTLMEIENSAQFGKNRDDALAKLVEALNIPTPGIWDYV---RSPAN 622 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIW 158 + I TA +K + +S D+ + A R+ + + + G Sbjct: 623 APPLADEDMIRTAFIYKKAVAEPVGESII---HNDTTAFASARKPLAQVFKPVGGGAGTE 679 Query: 159 VLDI--HLKS-FCFLDSLENTYSPSCSLLSQ--QAQWLKDWITQKKESL--VPFVIAGDF 211 + I H KS + S L++ QA+ L D+ T ++S + GDF Sbjct: 680 FIAIANHFKSKGSAATPDDTDKGQGNSNLARTAQAKSLLDFATSLQQSKGTDKVFLIGDF 739 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI---DYFVMDQNAY- 267 N G D + + + K K++ +A + + D+ + A Sbjct: 740 N----SYGKEDPI-NVLTAAGYVNQDDKAKNADGSAKHSYLFGGLVGSLDHILASPAANG 794 Query: 268 ----------KFLIQESFSEILYNEDDIKSR---GKRLSDHCPISIDYDF 304 + + YN + R SDH P+ + D Sbjct: 795 VVTGADIWNINSVESVALEYSRYNNNVTNYYAPDQFRASDHDPVVVGLDL 844 >gi|150008704|ref|YP_001303447.1| hypothetical protein BDI_2094 [Parabacteroides distasonis ATCC 8503] gi|255014502|ref|ZP_05286628.1| hypothetical protein B2_11369 [Bacteroides sp. 2_1_7] gi|256841263|ref|ZP_05546770.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937128|gb|ABR43825.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256737106|gb|EEU50433.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 348 Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 110/363 (30%), Gaps = 85/363 (23%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY 54 ++ ++ L+FF P + A +++++N+ ++ + L + T S Y Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 55 -TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKN-----TWCIFYSTERLINH 101 L+Q AK + A ++ L E+ + + ++ + + + + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSPDP-- 117 Query: 102 SKRDSNNDIHTAIAV-RKKNVRVLQQSYPLL--GAKDSFSRAGNR-RAVELLVEINGKKI 157 I+ A+ R + + +S P+ G K +R + G + Sbjct: 118 ------RGINVALLYQRDQFFYLRHESIPIRFSGNKHKLTRDILHVYGKIIT----GDTL 167 Query: 158 WVLDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 V H S + + L + L +I GDFN Sbjct: 168 DVFVCHFPSRYGGEKESEKDRFDAARTLRGSSDSL-----LLIREKPQILIMGDFN---- 218 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDS-RCN---------------ANKNLRNKIPIDYF 260 D I + + DS C ++K +D Sbjct: 219 -DTPQDRSISEIFAAQAFPENTQITDSTSCTYYNLFASPHITQFPGSHKYQGEWSQLDQI 277 Query: 261 VMDQN-----AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPIS 299 +++++ + +I ES + SDH P++ Sbjct: 278 IVNRDLITQESSMHIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLT 337 Query: 300 IDY 302 +D+ Sbjct: 338 VDF 340 >gi|311747824|ref|ZP_07721609.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|126575815|gb|EAZ80125.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 278 Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 86/290 (29%), Gaps = 60/290 (20%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + ++++NI ++ R TS+ + D+V +QE+ S Sbjct: 40 TITVLTYNIYH---------GEDPANRGTSNLDEIAALILQYSPDVVAMQEVDSMTTRTA 90 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT------AIAVRKKNVRVLQQSYPLLGAKDS 136 + +L +S + + + V K Q+ P+ + Sbjct: 91 GVYGKKVDLVQELAKLTGYSGYFAKAMDYAEGGYGEGLLV-KGEAIFSTQNLPIPHGGEP 149 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + A + N KKI + H F E Q + + Sbjct: 150 RAAAWAEFKL-----SNDKKIAIAGTH-----FCHEFEENRIA-------QVKEIS---K 189 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDF--WKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +S +P + AGD N + + WK + + +L++ Sbjct: 190 VAGQSNLPVIWAGDLNLRPDSEAYRSIIGTWKDAGSDPTPYSPTFG---------SLKDG 240 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + F+ Y D+ SDH P+ + F Sbjct: 241 PRIDYV--------WFDPSKFTLESYQVLDVP-----FSDHYPVLVTLKF 277 >gi|253565260|ref|ZP_04842715.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945539|gb|EES85946.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 361 Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 98/313 (31%), Gaps = 80/313 (25%) Query: 21 AQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A +++ ++N+++ +EQ G S + L Y K DI+ QE Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSCKE------------LAAYMKEHRVDIICFQE------ 141 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F N + ++ + + N I A L YP+ ++ Sbjct: 142 ----FAGNRY---FTPDSIRNAFADWQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYP 194 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF-----------------------CFLDSLENT 176 ++ + ++G+ I V + HL++ L Sbjct: 195 DSRNCSMWCDLNVDGQTIRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEG 254 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + QA+ L+ I + P ++ GDFN + + T+ ++ Sbjct: 255 LNENFRKRAAQAKTLEQLIRT---TPYPVLVCGDFN-----SLPSSYTYSTVKGDN---- 302 Query: 237 FPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ C + IDY + F + Y D+ Sbjct: 303 -LQDGFQTCGHGYMYTFRYFKRLLRIDYIF---------HSKEFKGVDYYSPDLDLC--- 349 Query: 292 LSDHCPISIDYDF 304 SDH P+ ++ Sbjct: 350 -SDHNPVVMEVKM 361 >gi|254882565|ref|ZP_05255275.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 4_3_47FAA] gi|319642095|ref|ZP_07996761.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A] gi|254835358|gb|EET15667.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 4_3_47FAA] gi|317386361|gb|EFV67274.1| hypothetical protein HMPREF9011_02361 [Bacteroides sp. 3_1_40A] Length = 336 Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 112/355 (31%), Gaps = 75/355 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL------SEQEGVSLWKNSVK-----RT 50 ++K +L L + + R++ +N+ L + + ++ K R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINH 101 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSP---- 116 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160 I A+ ++ + ++L ++ + K+ R R + ++ ++ +G + V Sbjct: 117 ----DERGIDVALLYQRGSFKLLGKNSLSVPYKEM-ERRPTRDILHVMGQVASGDTLDVF 171 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H+ ++ S + +L+ A + + ++ V +I GDFN +Y Sbjct: 172 VCHMPSRAGGEEKSEPYRLFTA-QILNIAADSI---MNLRQHPNV--MIMGDFN---DYP 222 Query: 219 GNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQ 272 NN K + + D R R + +D ++ L Sbjct: 223 TNNS-IAKVLGAVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSG---FLLQG 278 Query: 273 ESFSEILYNEDDIKSRGKRL------------------------SDHCPISIDYD 303 Y++ I L SDH P+ +D++ Sbjct: 279 HDSMRTSYDKAQILKYPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|224540445|ref|ZP_03680984.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus DSM 14838] gi|224517959|gb|EEF87064.1| hypothetical protein BACCELL_05358 [Bacteroides cellulosilyticus DSM 14838] Length = 364 Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 96/331 (29%), Gaps = 73/331 (22%) Query: 25 RLVSWNINTL------SEQEGVSLWKNSVK-----RTTSDYTLLRQYAKNLD----ADIV 69 R+VS+N+ L + + ++++ + + + + +V Sbjct: 42 RVVSYNVENLFDCRHDTLKNDYEFLPDAMRHWNYTKYKKKLDAIARVITAVGGWTPPALV 101 Query: 70 FLQEMGSYNAVA-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + V + + + I A+ ++ +++ Sbjct: 102 ALCEVENDSVLRDLTQRSVLREAGYRYVMTNSP--------DQRGIDVALLYQRDQFKLI 153 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL----VEINGKKIWVLDIHL--KSFCFLDSLENTYS 178 S+ + + R ++L + +N + + +HL +S +S Sbjct: 154 --SHQGIPIPHRSGKKKFRPTRDILHVCGMLLNSDTLDIFVVHLPSRSGGVKESEPYRLF 211 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF--------WKTIDP 230 + +Q + D I + +I GDFN + N ++ P Sbjct: 212 AA-----EQLKAAVDSICSYRYHPQ-ILIMGDFNDYPDNASVNKILSAEAPPQNGDSLQP 265 Query: 231 NDSLIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQN------------------AYKFL 270 ++ R + K +D+ ++ FL Sbjct: 266 QKLYHLLARKSAIRKHFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTGEDKADVFHSSFL 325 Query: 271 IQESFS---EILYNEDDIKSRGKRLSDHCPI 298 + E + SDH P+ Sbjct: 326 LTEDKKYGGVQPFRTYYGMKYQGGYSDHLPV 356 >gi|167907619|ref|ZP_02494824.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei NCTC 13177] Length = 624 Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|228919300|ref|ZP_04082670.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840407|gb|EEM85678.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 272 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 39/266 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + +I Sbjct: 20 IQYLAKVIQEEEYDVIALQEVSQSIQAEIVCGNKKEDNFGLLLLEELKELHVKDYNITWD 79 Query: 111 --HTAIAVRKKNV------RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTRKIVSTTLAYNGKDITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVDSNKLAFLMGDFNNNARLKGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHSLRIDLILCNQSKKV----HSSKV 241 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 242 IFNGTN-----RNVISDHFGVEVQLD 262 >gi|71735024|ref|YP_274825.1| exonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487832|ref|ZP_05641873.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625127|ref|ZP_06458081.1| exonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648704|ref|ZP_06480047.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 2250] gi|71555577|gb|AAZ34788.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324615|gb|EFW80692.1| exonuclease III [Pseudomonas syringae pv. glycinea str. B076] gi|320328987|gb|EFW84986.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330867998|gb|EGH02707.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330880714|gb|EGH14863.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330985313|gb|EGH83416.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008544|gb|EGH88600.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 84/316 (26%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + ++ + + H +A L P L F Sbjct: 38 ---SDEQFPHAEVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHF 141 Query: 200 ESLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPND 232 + P ++ GD N R + + W +D Sbjct: 142 SNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFR 201 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 L ++ S + + + ID + + D Sbjct: 202 HLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLR 254 Query: 288 RGKRLSDHCPISIDYD 303 ++ SDH PI ++ + Sbjct: 255 GMEKPSDHAPIWLELN 270 >gi|30260540|ref|NP_842917.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47525644|ref|YP_016993.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229601471|ref|YP_002864988.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|30253908|gb|AAP24403.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47500792|gb|AAT29468.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229265879|gb|ACQ47516.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 263 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D+V LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E L Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEE--------LFKGQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|313159654|gb|EFR59012.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 250 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 13/76 (17%) Query: 4 KYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 LA++F + A Q V+ +S+NI + V D + + Sbjct: 6 SVALAVLFCALMPAACTTQTTAVKFMSYNIRNGRGADDV-----------QDLGRIAEVI 54 Query: 62 KNLDADIVFLQEMGSY 77 + D+V LQE+ S Sbjct: 55 GRVAPDVVALQEVDSV 70 >gi|260365545|ref|ZP_05778082.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] gi|260877608|ref|ZP_05889963.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|260895379|ref|ZP_05903875.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|260901651|ref|ZP_05910046.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308085255|gb|EFO34950.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|308090661|gb|EFO40356.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|308108913|gb|EFO46453.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308114359|gb|EFO51899.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] Length = 317 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 89/308 (28%), Gaps = 30/308 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 ++ V+ N+ ++ L + L+ DI+ LQE+ S Sbjct: 6 RITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVFSIEE 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F + F + + + AIA R V + + Sbjct: 66 TRAYFLSLGFPYFATVDT-PKIEDEYIYSRPVVAIASRFPIEDVKRVEFDSNSLTPFGVN 124 Query: 140 AGNRRA----VELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLSQQ-----A 188 + +V I + HLKS D + E + LS Q A Sbjct: 125 EAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQRGWEA 184 Query: 189 QWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEK 241 L+D + + + +P V+ GD N+ I+ N+ +T + Sbjct: 185 AMLRDAMQAQYRAHPIPTVLMGDMNQPISKESVNNVLTETFSDSVTELQLKDGWNLQTGS 244 Query: 242 DSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYN--EDDIKSRGK----RLS 293 + +DY ++ Q I Y E + + S Sbjct: 245 SLEVRPATHYHFSTGNVLDYILLSQEFDTHSDISVAEVIDYQVLEQHLINPSYEKDKNAS 304 Query: 294 DHCPISID 301 DH +S+ Sbjct: 305 DHAFVSLT 312 >gi|229020312|ref|ZP_04177079.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229026537|ref|ZP_04182888.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228734763|gb|EEL85406.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228740984|gb|EEL91215.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 353 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 99/315 (31%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T + + + +N ++D LQE+ Sbjct: 57 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFTLLQEVDI 116 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK---------------NV 121 + + F N S + + + V K Sbjct: 117 KS--HRSFDVNEHEFLKKGLPNYASSFGKNYDTRWVPVPVTKPMGYAEGGLSTFSKYTVQ 174 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + P + +R VE + NGK + +++IHL + D Sbjct: 175 TATRFQLPGMEPWPKRLFDLDRAIVEHKIPVDNGKYVRLVNIHLSA---YDEGGKIR--- 228 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQA++LK+++ + ++ ++ GD+N+ ++ +D + P + Sbjct: 229 ----KQQAEYLKEYMNKCYQNGDYVILGGDWNQLLSNAQLSDPKFVKERPEWLVELPKDF 284 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D K ID F++ N + D Sbjct: 285 ADGGFQWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 335 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 336 LKFEN---SDHNPVS 347 >gi|65317801|ref|ZP_00390760.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012] Length = 263 Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D+V LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E L Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEE--------LFKGQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|225708354|gb|ACO10023.1| Deoxyribonuclease gamma precursor [Osmerus mordax] Length = 318 Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 38/251 (15%) Query: 67 DIVFLQEMGSY---------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 D+ LQE+ ++ + P + + S R S + + R Sbjct: 55 DVCLLQEVRDQKKRALPALLESLNRYDPDHDYQYVASE-----PLGRKSYKEQYV-FVYR 108 Query: 118 KKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLVEING-KKIWVLDIHLKSFCFLDSLEN 175 +V V Q YP D + + V + ++ H + + Sbjct: 109 TGSVAVTGQYQYPDSLPGDEDAFSREPFVVRFKAPSTALGEFVLIPQH--------TSPS 160 Query: 176 TYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + L Q +K W + + GDFN Y+ + + + S Sbjct: 161 NATREIDALYDVFQAVKKRW------NTEMVMFLGDFNADCGYVAKKNRVKVRLYSDPSF 214 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRL- 292 + +K+ D V+ + + ++ S ++++ S + L Sbjct: 215 LWLISDKEDTTVRAST---SCTYDRIVVHGSEFSRGIVPYSAKPFNFDKEYQLSEEQALE 271 Query: 293 -SDHCPISIDY 302 SDH P+ + Sbjct: 272 VSDHYPVEVVL 282 >gi|86131717|ref|ZP_01050314.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85817539|gb|EAQ38713.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 343 Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 94/301 (31%), Gaps = 56/301 (18%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 ++ +L+ F + L+++N+ + V N KR + + ++ Sbjct: 81 HIFSLIRFGGGSDTKQVDTLTLLTYNVRQFNVYGWVE-EANVGKRAIA-------FIEDQ 132 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + DIV LQE + + + K ++ +V+ Sbjct: 133 NPDIVCLQE---------------YHPDFELDAKKYPFKHKVMRPANSKFG------QVI 171 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 +P++ + + +++ I ++H +SF SL N + L Sbjct: 172 FSKFPIVHSGSLDFGKKGNNGIYADIKVGEDTIRAYNMHFQSFRLSPSLNNLQKENSKKL 231 Query: 185 --------SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +Q +K ++ + S ++AGDFN D D+ + Sbjct: 232 LGRLGVAFEKQEGQVKKFLQSEAASPHKVIVAGDFNNSATSYMYRK---VRGDKVDAFAK 288 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + + ID+ + D E + + LSDH Sbjct: 289 AGSGTGATFWFDII---PLRIDFILAD---------EQLEVLDFET----YGDIDLSDHK 332 Query: 297 P 297 P Sbjct: 333 P 333 >gi|116627133|ref|YP_819752.1| hypothetical protein STER_0240 [Streptococcus thermophilus LMD-9] gi|116100410|gb|ABJ65556.1| Metal-dependent hydrolase [Streptococcus thermophilus LMD-9] Length = 259 Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 46/184 (25%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + + S + Sbjct: 9 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHVLPSAISIHQDHFFHLLVEKLAE 68 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 69 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 126 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+K+ V IHL + D Q ++W I ++ + P ++A Sbjct: 127 VDGRKVAVASIHLS---WWDKG------------FQ----EEWARIEERFQSIGKPLILA 167 Query: 209 GDFN 212 GDFN Sbjct: 168 GDFN 171 >gi|296414577|ref|XP_002836975.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632822|emb|CAZ81166.1| unnamed protein product [Tuber melanosporum] Length = 290 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 94/310 (30%), Gaps = 44/310 (14%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 L T +RL + NI + + + R + + + ++ LQ Sbjct: 2 LRTNTPPSPLPLRLYTHNIRYATTHP-LPHESSWPTRLPRIISSIAYTQHQHPSTLLCLQ 60 Query: 73 EMGSYNAVA--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ ++ + P++ + R H + + I+ R R S Sbjct: 61 EVLRTQLLSILSLLPRSYN--YIGRARDDGHEAGEYSPVIYDTEVWRLDKWRSKWLSPTP 118 Query: 131 LGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + A R +G+++ VL+ HL D S ++ ++ Sbjct: 119 ERPSKGWDAACIRILTVGYFTHWESGRRVVVLNTHL-----DDQGAVARRESARMIVEEV 173 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA- 247 + + + V+AGD N DD +K + SL+R + Sbjct: 174 REVLG-----EGEGRGVVLAGDMN-----SPEGDDAYKIFTASGSLLRDARADVPPAKRY 223 Query: 248 ---------NKNLRNKIPIDYFVM-----DQNAYKFLIQE-SFSEILYNEDDIKSRGKRL 292 ID+ D + I S E ++++ Sbjct: 224 GHQMTFSGFGNEHEIPQRIDFVFAAEAKEDDEKAIWTITNYSVLENKFDDEIYS------ 277 Query: 293 SDHCPISIDY 302 SDH P+ +D Sbjct: 278 SDHRPVVVDL 287 >gi|242078097|ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] gi|241940167|gb|EES13312.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] Length = 369 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + + ++WN N+L + R SD+ Q LD D++ +QE+ Sbjct: 44 PAEEPRKFLTWNANSL------------LLRMKSDWPAFSQLVARLDPDVICVQEVRMPA 91 Query: 79 AVAKVFPKN 87 A +K PKN Sbjct: 92 AGSKGAPKN 100 >gi|154492338|ref|ZP_02031964.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] gi|154087563|gb|EDN86608.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] Length = 353 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 87/300 (29%), Gaps = 69/300 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +V++N + ++ + Y K L DI+ QE Sbjct: 93 AASEQAGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKQLQPDIICFQEA 140 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGA 133 P + + + + + ++ I+ R + + YP+ Sbjct: 141 ----------PGDGYY-------HRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIHSV 183 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + + + ++ V IN + I V++ H ++ +P L +A+ +KD Sbjct: 184 KALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPG-KSLEVRAKAVKD 242 Query: 194 WI------------------TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 I + + S P ++ GDFN + L Sbjct: 243 LILKMKNNYLKRAEQADSIHAEIERSPYPVLVCGDFNDTPASYTYH-----------QLR 291 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + C + + + I F D S SDH Sbjct: 292 KGLTDGFRDCGSGYQYTFRQLY---------KLWRIDYVFYSEFLKGQDCFSPDAPYSDH 342 >gi|170736479|ref|YP_001777739.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169818667|gb|ACA93249.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 604 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 108/320 (33%), Gaps = 52/320 (16%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEM- 74 +R+ S+N +N + + + R + ++ + DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 75 ----GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 G +AV ++ N W + + + R + I A+A+ + +V Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRV------VDPGTSRLGGDAI--AVAMIYDSRKVEPVGR 404 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSC--S 182 A D +R ++ L + N + + V HLKS D+ + C Sbjct: 405 AATLAIDDKNRQPLAQSFRL-INGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNP 463 Query: 183 LLSQQAQWLKDWI--TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPND 232 ++ A + DW+ ++ GDFN R + G + + I N Sbjct: 464 TRTRAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPIRTLESRGYRNLVARWIGANA 523 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQN---AYKFLIQESFSEILYNEDD 284 + E +A L + + D+ Y + + + + D Sbjct: 524 YSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYAAD 583 Query: 285 IKSRGKRLSDHCPISIDYDF 304 R SDH P+ ID Sbjct: 584 ----AYRSSDHDPVLIDIAL 599 >gi|148654035|ref|YP_001281128.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] gi|148573119|gb|ABQ95178.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] Length = 251 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 93/311 (29%), Gaps = 90/311 (28%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI + L + V + K+L DI+ LQE+ N + Sbjct: 4 SNSITITTYNI----HKGMSPLNRQVVT------KQIGMALKDLHPDILCLQEVQGQN-L 52 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSN----------------NDIHTAIAVRKKNVRVL 124 ++ N + N S+ + + H AV ++ + Sbjct: 53 KRMVKYNEY---------PNQSQHEWFGEYLNCAHSYGKNCEYENGHHGNAVLSRHP-LD 102 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + R V L + + + VL HL + LEN Sbjct: 103 PKHNVNITVNKLEQRGVLHCEV-LPLGW-PEPVVVLCAHL------NLLENDRQ------ 148 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDDFW----KTIDPNDS 233 +Q + + +++ + P ++AGDFN +++ + N + + K + P Sbjct: 149 -KQYRAIAEYVNDTIDQSRPLILAGDFNDWKKVSCQRLAHELNMTEAFMQKHKKLLPTYP 207 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 +D + K LS Sbjct: 208 AKLPVLS----------------LDRIYVRNLKVKRAWVHK-----------GKPWSELS 240 Query: 294 DHCPISIDYDF 304 DH PIS + Sbjct: 241 DHLPISAELSL 251 >gi|126174046|ref|YP_001050195.1| PKD domain-containing protein [Shewanella baltica OS155] gi|125997251|gb|ABN61326.1| PKD domain containing protein [Shewanella baltica OS155] Length = 944 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 104/338 (30%), Gaps = 60/338 (17%) Query: 14 VPCTASVAQKVRLVSWN-INTLSEQE-GVSLWKNSVKRTTSDYTLLRQYAKN----LDAD 67 + T +++ S+N +N + G T S++ + + + AD Sbjct: 450 IAPTLVEGGNLKVASFNVLNYFNGDGQGAGFPTARGANTLSEFERQKAKIVSAMVGISAD 509 Query: 68 IVFLQEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + L E+ + + + + + I + Sbjct: 510 VFGLMEIENDGFGANSAIADLVAGLNAAVGEARYAYI-----APTGMNAIGTDAITVGLI 564 Query: 116 VR------KKNVRVLQQSYPLLGA--KDSFSRAGNRRAVELLVEINGKK--IWVLDIHLK 165 R + R+L + L + K F + NR + +NG + + V HLK Sbjct: 565 YRSDKVTPQGAARILSSANSPLDSDQKPLFDDSKNRPMLTQAFSVNGSEEGVVVAVNHLK 624 Query: 166 SF---CFLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 S C D N +C+ ++ A WI++ + ++ GD +N Sbjct: 625 SKGSECAGDPDLNDGQGNCNITRTRAATAAGQWISE-QYPDQGVLLIGD----LNAYAKE 679 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ--------E 273 D + F K + S + +D+ + + ++ + Sbjct: 680 DPL-TALGNAGFSELFAKLEKSNPYSYVFSAESGQLDHALANAALLDKVVDVTEWHINTD 738 Query: 274 SFSEILYNE---------DDIKSRGKRLSDHCPISIDY 302 + YNE D + R SDH P+ I Sbjct: 739 EPRVLDYNEEFKTPAQIQDLFATDAYRSSDHDPVVISL 776 >gi|262341194|ref|YP_003284049.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272531|gb|ACY40439.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 253 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 86/271 (31%), Gaps = 62/271 (22%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L + ++ + DI+ LQE+ K FP+ + NH S ++ + + Sbjct: 19 LSDWIESSNPDILCLQEI-------KAFPE-QIDTNIFDQLGYNHYWFSSEKKGYSGVGI 70 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + L + D R ++ I+ K + ++ ++L S N Sbjct: 71 LCKEKPIHVEYGIGLSSIDQEGR---------VLRIDMKNLSIISLYLPSG-------NN 114 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDS 233 + + + + + +I GD+N +I+ + I Sbjct: 115 MKKRLNFKFFFMKNFFSHVKKIRNQFNHLIICGDYNICHHEIDIYDPMKH--QEISGFLP 172 Query: 234 ---------LIRFPKEKDSRC----NANKNLRNKI---------PIDYFVMDQNAYKFLI 271 L + C + + IDY ++ + + + Sbjct: 173 EEREWMTHFLNLGFVDSFRNCVQEAHHYSWWSYRSNARKNNKGWRIDYVMVSSSLKEKIR 232 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 Y D+K LSDHCP+ ++ Sbjct: 233 NA------YLLSDVK-----LSDHCPVVLEI 252 >gi|262280501|ref|ZP_06058285.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] gi|262258279|gb|EEY77013.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 38 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 86 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 87 AIYSRLPFVSVKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 139 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 140 EAQARKDL---FLGEYAKILKQW----RDENKSVIICGDYN--IVHKRIDIKNWSG---- 186 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 187 -------NQKSSGCLPHE----RAWLDHI 204 >gi|284030306|ref|YP_003380237.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809599|gb|ADB31438.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 329 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 93/305 (30%), Gaps = 79/305 (25%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + L L+P +R++S N++ + RT LL Sbjct: 97 WGLMFGNLLIPGKGGGPYDLRVLSHNVDAANPDPA---------RTAQ--QLLAA----- 140 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 DAD++ L+E+ S + KV + K+ + H V + L Sbjct: 141 DADVMALEEITSADL--KV-----------------YKKQFAATYPH----VVTRGTVAL 177 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL--ENTYSPSCS 182 +P+ + RA+ V K+ HL S S N + + Sbjct: 178 WSKFPVEESASVDVGFAWTRALRAEVSTPEGKVAFYVAHLASVRIGTSGFTSNQRNETIK 237 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 L QQ E L V+ GDFN ND +++ P + +R + Sbjct: 238 QLGQQIA---------GEKLAGVVVMGDFN-----GTAND---RSLAPVTAGLRSAQGAA 280 Query: 243 SR----CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + K + ID+ ++ + G SDH P+ Sbjct: 281 GQGFGFTWPAKFPMAR--IDHIMVRG------------VTPTKAWVMDPTG---SDHRPV 323 Query: 299 SIDYD 303 + Sbjct: 324 VAELT 328 >gi|221104337|ref|XP_002156804.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 506 Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 107/294 (36%), Gaps = 29/294 (9%) Query: 25 RLVSWNI--NTLS-EQEGVSLWKNSVKRTTSDYT--LLRQYAKNLDADIVFLQEMG--SY 77 R++ WNI L+ E + K + D+ L+ ++ L+ ++ LQE+ Sbjct: 227 RVLQWNILAQGLTYSTETENFCKVPCQFLEWDHRSKLIMEHIDTLNPHVICLQEVDHFDD 286 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 V + PK + F++ + ++ + N+ +A+ K+ R L + + D Sbjct: 287 FFVPCLIPKG-YRGFFAPK--LDSPCFNFPNNGPDGVALFYKSERFLLKDLVISYLNDGN 343 Query: 138 SRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + + + ++E + I + HLK+ + + C ++ + Sbjct: 344 EKEKKQAILACVLEDKITCQCIIIAVTHLKAKDGFEMQRVAQANDC------INVIESML 397 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-ANKNLRNK 254 + + GDFN + N ++ I+ + L + + K Sbjct: 398 NKH--KNSSVIWCGDFNSEENEECHSRIKEAKINVKNVLNELSSKMSFTTWKRRPDSEKK 455 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRLSDHCPISIDYDF 304 IDY ++ E+ + +E DI + SDH + +D+ + Sbjct: 456 QVIDYIFYS---SEYFSPENV-LLPPDEVDIPTERFPSFNHPSDHISLCVDFSY 505 >gi|299768386|ref|YP_003730412.1| catabolite repression control protein [Acinetobacter sp. DR1] gi|298698474|gb|ADI89039.1| catabolite repression control protein [Acinetobacter sp. DR1] Length = 274 Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 32 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 81 AIYSRLPFVSVKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 133 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 134 EAQARKDL---FLGEYAKILKQW----RDENKSVIICGDYN--IVHKRIDIKNWSG---- 180 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 181 -------NQKSSGCLPHE----RAWLDHI 198 >gi|189466708|ref|ZP_03015493.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM 17393] gi|189434972|gb|EDV03957.1| hypothetical protein BACINT_03083 [Bacteroides intestinalis DSM 17393] Length = 353 Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 80/279 (28%), Gaps = 66/279 (23%) Query: 66 ADIVFLQEMGSYNAVA-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 +V L E+ + + + V + + + I A+ ++ Sbjct: 87 PALVALCEVENDSVLRDLTQRSVLREAGYRYVMTNSP--------DQRGIDVALLYQRDR 138 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELL----VEINGKKIWVLDIHL--KSFCFLDSLE 174 +++ SY + + R ++L + +N + V +HL +S +S Sbjct: 139 FKLI--SYQGIPIPHISGKKKLRPTRDILHVCGMLLNHDTLDVFVVHLPSRSGGAKESEP 196 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + +Q + D I + +I GDFN +N K + L Sbjct: 197 YRLHAA-----RQLKAAADSIYLHRYHPQ-ILIMGDFN----DYPDNASVSKIVSAKAPL 246 Query: 235 I------------RFPKEKDSRCNAN--KNLRNKIPIDYFVMDQN------------AYK 268 ++ ++ + K +D+ ++ + Sbjct: 247 QDKSSLQPQRFYHLLARKAATQKDFGSYKYQGEWGLLDHIIVSGTLLQPDADFCTSESKA 306 Query: 269 FLIQESF---------SEILYNEDDIKSRGKRLSDHCPI 298 + + SF + SDH P+ Sbjct: 307 DIFRPSFLLTDDKKYGGVQPFRTYYGMKYQNGYSDHLPV 345 >gi|293610563|ref|ZP_06692863.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826907|gb|EFF85272.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 280 Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 38 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 86 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 87 AIYSRLPFVSVKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 139 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 140 EAQARKDL---FLGEYAKILKQW----RDENKSVIICGDYN--IVHKRIDIKNWSG---- 186 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 187 -------NQKSSGCLPHE----RAWLDHI 204 >gi|12852610|dbj|BAB29476.1| unnamed protein product [Mus musculus] Length = 278 Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 76/248 (30%), Gaps = 38/248 (15%) Query: 67 DIVFLQEMGSYN--AVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 DI +QE+ + AV+ + K+ + S RD +++ RK Sbjct: 54 DIALVQEVRDPDLSAVSLLMEQINRVSKHEYGFVSSK-----PLGRDQYKEMYL-FVYRK 107 Query: 119 KNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 V+ YP S + +V K++ ++ +H Sbjct: 108 DVASVVSTYQYPDPEDAFSREPFVVKFSVP---SCATKELVLIPLH-----AAPHQAVAE 159 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + + + W + + DFN Y+ +D + ++ Sbjct: 160 IDALYDVY--LDVIDKW------NTDDMLFLCDFNADCKYVKAHDWPSIRLRSSEVFKWL 211 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--SD 294 + N + D V+ + L S S + E+ + + L SD Sbjct: 212 IPDSAHTTVGNSDCAY----DRIVVSGAHLRRSLKPHSASVHNFQEEFDLDQTQALAISD 267 Query: 295 HCPISIDY 302 H P+ + + Sbjct: 268 HFPVEVTF 275 >gi|294658206|ref|XP_460547.2| DEHA2F04158p [Debaryomyces hansenii CBS767] gi|202952957|emb|CAG88863.2| DEHA2F04158p [Debaryomyces hansenii] Length = 406 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 109/362 (30%), Gaps = 90/362 (24%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY--------AKNLDAD 67 + S QK+ ++S+N+ LS +WK +Y Y + + D Sbjct: 61 PSTSKKQKISVMSFNL--LSRH---YMWKPVFGYLEQEYLSWSDYRFPLINLMIRQFNCD 115 Query: 68 IVFLQEMGS---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRV 123 I+ QEM +K FP + FY + + + +I I V V Sbjct: 116 IMCFQEMEHLIYEKFWSKGFPSPNYHSFYVRKSEPVYWGDRPSENIDGVGIFVNGDKFDV 175 Query: 124 LQQSYPLLG------------AKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSF 167 L G K + R R V LLV++ NGK ++V + HL Sbjct: 176 LDSHAIHFGEYIMQHHVKFNVTKATVERVIPRNTVALLVKLRDKQNGKILYVTNTHL--- 232 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKINYLGNNDDFWK 226 S + L D+I P +I GDFN + ++ Sbjct: 233 --YWSPKFNDVKIIQT-KLLLNVLHDFID-HNCLCDPCIIMCGDFNSN-----PSSKVFQ 283 Query: 227 TIDPND---------SLIRFPKEKDSR--------------C-----------NANKNLR 252 ++ +L + + +S C N K L Sbjct: 284 LLNTGTIDAFKCNEFALHDYDHKANSELFHNGHIENPFHLACAYESLLTHSHINPRKKLE 343 Query: 253 NKIP-------IDYFVMDQNAYKFLI-QESFSEILYNEDDIKSRGKR--LSDHCPISIDY 302 +D+ +N +K + Y E + SDH P+ + Sbjct: 344 FTSFTKGLIDVVDHIWYSKNHFKVTKLLGEVDQSYYTETGVVGFPNSQFPSDHIPLVTEL 403 Query: 303 DF 304 + Sbjct: 404 AY 405 >gi|327541576|gb|EGF28107.1| secreted protein containing Endonuclease/exonuclease/phosphatase domain [Rhodopirellula baltica WH47] Length = 284 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 32/277 (11%) Query: 23 KVRLVSWNINTLSEQEG-VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +R+V++NI L SL + +V R L D DI+ E S Sbjct: 32 PLRVVAYNIYNLKGWPSQSSLAQQAVARGQMA-KRLAMELALYDPDIINFSESPSEKLTK 90 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + +NH + S + + + K K+ F+R Sbjct: 91 E----------IAELLGMNHVRFPSGGNWPGTLLSKSKISDPQNVPMNGERPKELFTRHW 140 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VEL N + + V HL +P ++ ++ + + + + +S Sbjct: 141 GRALVEL---PNDEPLIVHSAHL-----------YPTPEPTIRLKEIRAMIESMKSDLDS 186 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 ++ GD N + + W D+ + + K + IDY Sbjct: 187 GRSMLLIGDLNH--SPDTDEYKLWIDAGWIDTFAKVGEGNGFT---IKADNPEWRIDYVF 241 Query: 262 MDQNAYKFLIQE-SFSEILYNEDDIKSRGKRLSDHCP 297 K + + E + ++ + LSDH P Sbjct: 242 ATGPIAKRVSESRPLFEGAFRVNNEDEKSYALSDHLP 278 >gi|304316058|ref|YP_003851203.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777560|gb|ADL68119.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 232 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 98/279 (35%), Gaps = 60/279 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + ++++NI G + N + + K AD++ LQE+ +Y Sbjct: 3 LTIMTYNI-----HGGKDIDDNLT------IYGISNFIKQSKADVIGLQEVDTY------ 45 Query: 84 FPKNTW--CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ + I Y +RL + N I N + + S Sbjct: 46 LGRSYFLNEIKYLAKRLKMYYAFGPNIKIGLGSF---GNGILSRYPIVKKNNYHLTSTGE 102 Query: 142 NRRAVELLVEING-KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + +L+E++ +KIW L HL + + S +L I ++ + Sbjct: 103 RRGVLSVLIELDSYRKIWFLTTHL-----GLNSKERVIQSQEILK---------IIKRLD 148 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P ++ GDFN ++ + I+ L+ +S + + + IDY Sbjct: 149 Y--PVILTGDFN-----ETPENEAYSIINHV--LVDGAFSANSDYYSYLDGDEPVRIDYI 199 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ++ + + IK+ LSDH P+ Sbjct: 200 MHSKDI--------------SVESIKAVDCNLSDHFPVI 224 >gi|228473947|ref|ZP_04058688.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] gi|228274461|gb|EEK13302.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] Length = 343 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 89/301 (29%), Gaps = 57/301 (18%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 L + +++ ++S+N+ +++ R + + K I+ Sbjct: 88 FVQLPKNNVTSPEQLSVMSFNV---RLFNHYKWSSDTLLR-----EKILTFVKEEHPKIL 139 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 LQE +Y + K H + K + + YP Sbjct: 140 ALQE-----------------FYYKEKESFPFYKYKKFIYKHK----KDKIGQAILSDYP 178 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS---- 185 ++ + V + +NG + + +H +SF D+ + + L Sbjct: 179 IINSGSLDFPHTGNNGVYADIVVNGDTLRLYSLHFESFHIEDTDISQENSKRIFLKLPRR 238 Query: 186 ---QQAQWLKDWITQKKES-LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 QQAQ + +S P V+ GDFN + ++ + F + Sbjct: 239 FAIQQAQV--ELFNAHADSCPYPIVVCGDFN-NTAFSY----LYQKFQDRGLVDSFEEAG 291 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 IDY + D Y + +Y D SDH PI Sbjct: 292 SGFGRTYDFPYFPFRIDYILADP--YFKITSH----KVYTGRDY-------SDHFPIRAT 338 Query: 302 Y 302 Sbjct: 339 L 339 >gi|212694164|ref|ZP_03302292.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855] gi|237727703|ref|ZP_04558184.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D4] gi|265751009|ref|ZP_06087072.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663384|gb|EEB23958.1| hypothetical protein BACDOR_03690 [Bacteroides dorei DSM 17855] gi|229434559|gb|EEO44636.1| endonuclease/exonuclease/phosphatase family [Bacteroides dorei 5_1_36/D4] gi|263237905|gb|EEZ23355.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 336 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 109/355 (30%), Gaps = 75/355 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL------SEQEGVSLWKNSVK-----RT 50 ++K +L L + + R++ +N+ L + + ++ K R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINH 101 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSP---- 116 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160 I A+ ++ +++ ++ + K+ R R + + ++ +G + V Sbjct: 117 ----DERGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVF 171 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H+ ++ S + +L A + + ++ V +I GDFN +Y Sbjct: 172 VCHMPSRAGGEEKSEPYRLFTA-QILKIAADSV---MNIRQHPNV--MIMGDFN---DYP 222 Query: 219 GNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQ 272 NN K + + D R R + +D ++ L Sbjct: 223 TNNS-IAKVLGAVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSG---FLLQG 278 Query: 273 ESFSEILYNEDDIKSRGKRL------------------------SDHCPISIDYD 303 Y++ I L SDH P+ +D++ Sbjct: 279 HDSMRTSYDKAQILKYPFLLEEDEKYGGNIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|145540457|ref|XP_001455918.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423727|emb|CAK88521.1| unnamed protein product [Paramecium tetraurelia] Length = 243 Score = 42.4 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 91/277 (32%), Gaps = 49/277 (17%) Query: 23 KVRLVSWNI--NTLSEQEGV--SLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 ++++ WN +TLS+ + + R+ L+ Q+ K D+ +E+ Sbjct: 3 TLKILQWNTLADTLSDAFPLINKQFLQWNHRS----QLIAQFLKQHPCDVYCFEEVDHPE 58 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 +V + + K+ +++ I IA RK P L + Sbjct: 59 FFQQVLVDHLFIY---------QKKQHNSDGIL--IAYRKDLKLQSVNIVPFLENNKVSN 107 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + ++++ ++ HLK+ D + + Q + L + + Sbjct: 108 QF--------FIKVDFLDFILVVTHLKA--KTDFEKIRRN--------QLEQLNKCVKE- 148 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 ++ GDFN + ++ F + + P +R N++ D Sbjct: 149 ----DKVILCGDFNTQPELEAVSN-FLEISGMKCTNTTVPTTSKNRGKLETNIK-----D 198 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 Y + + + NE + S SDH Sbjct: 199 YILYKGVHLRQSQVGPTEGVQINESGLPSELF-PSDH 234 >gi|300947129|ref|ZP_07161343.1| conserved domain protein [Escherichia coli MS 116-1] gi|300957738|ref|ZP_07169925.1| conserved domain protein [Escherichia coli MS 175-1] gi|301646220|ref|ZP_07246116.1| conserved domain protein [Escherichia coli MS 146-1] gi|300315554|gb|EFJ65338.1| conserved domain protein [Escherichia coli MS 175-1] gi|300453207|gb|EFK16827.1| conserved domain protein [Escherichia coli MS 116-1] gi|301075557|gb|EFK90363.1| conserved domain protein [Escherichia coli MS 146-1] Length = 123 Score = 42.4 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 30/151 (19%) Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 GK I V+ +HL L + + Q L +W+ + + P ++AGDFN Sbjct: 3 GKAIHVMCVHL-------GLREAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFN- 47 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 D + + + E +R + + +D+ K Sbjct: 48 --------DWR-QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASAS 98 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + + LSDH P+S + Sbjct: 99 APTALP------LRTWRHLSDHAPLSAEIHL 123 >gi|254447779|ref|ZP_05061244.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] gi|198262559|gb|EDY86839.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] Length = 246 Score = 42.4 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 89/257 (34%), Gaps = 45/257 (17%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVF----PKNTWCIFYSTERLIN--HSKRDSNNDI 110 +R+ + +ADIV LQE+ + + P+ F + + + K Sbjct: 24 MREALRAANADIVCLQELQGEHHHHRNNHRHWPEEEQLEFLADSLWPHTAYGKNAVYQHG 83 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ + ++ + +++ SR+ ++ +G+++ ++ +HL F Sbjct: 84 HHGNAILSRQPFSDWENI-NVSHRENASRSLLHG---VIESNDGQRLHIICVHL--GLFE 137 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L D I +IAGDFN ++ D + + Sbjct: 138 RERRRQIRQ-----------LSDRIESHVPHHEALLIAGDFN---DWRQRCDRYLRQHSE 183 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFV---MDQNAYKFLIQESFSEILYNEDDIKS 287 + + K + K +D + NA K L + + Sbjct: 184 VEEVFEAHLGKVAPSFPAWYPLLK--VDRVYARGVSVNAVKRLTGQPWR----------- 230 Query: 288 RGKRLSDHCPISIDYDF 304 LSDH P+S+++D+ Sbjct: 231 ---GLSDHIPLSVEFDW 244 >gi|319759037|gb|ADV70979.1| DNA nuclease [Streptococcus suis JS14] Length = 1039 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 91/326 (27%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 677 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 678 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 736 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 737 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 796 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY 217 L S + L P ++ L I ++ + V+ GDFN Sbjct: 797 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYEFT 856 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N + + Sbjct: 857 KTI-----EILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFD---- 907 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 908 MVHVNSAFMEEHGRASDHDPLLVQLD 933 >gi|253752620|ref|YP_003025761.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|253754446|ref|YP_003027587.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] gi|251816909|emb|CAZ52558.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|251820692|emb|CAR47454.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] Length = 1039 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 91/326 (27%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 677 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 678 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 736 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 737 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 796 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY 217 L S + L P ++ L I ++ + V+ GDFN Sbjct: 797 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYEFT 856 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N + + Sbjct: 857 KTI-----EILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFD---- 907 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 908 MVHVNSAFMEEHGRASDHDPLLVQLD 933 >gi|253686638|ref|YP_003015828.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753216|gb|ACT11292.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 381 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 86/276 (31%), Gaps = 47/276 (17%) Query: 59 QYAKNLDADIVFLQEMGSYNAVA----KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTA 113 + L+ADI+ E+ + + + +V + + + + Sbjct: 120 KIITLLNADILCAVEVENMDVLRDFNNQVLGDDKFSQFVMIDSPNDPRGIDVACLTRY-- 177 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDS 172 R+ Q + A F +R +E+ ++ + I++L H KS Sbjct: 178 --------RIAQLRTHIFDAGKRFDPVFSRDCLEVTLDAGLKQPIYILCNHFKS--QSGQ 227 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFN-------RKINYLGNNDDF 224 E QA+ + + + Q + + VI GD N + L + D Sbjct: 228 TEEERLRGAEKRRDQAERVAEIVQQTYDLKKDYVVILGDLNEDSSNPWHSLAPLFSLSDL 287 Query: 225 WKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------- 268 IDP R+ + + +DY + ++ Sbjct: 288 HPVIDPERPEKERYTYYFAGGKKGARLNQ----LDYIFLSAPLHQAVVEWGVERRGIYNI 343 Query: 269 -FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +E + ++ S SDH + ++ D Sbjct: 344 DKIAAKEGAEPVTPLPEVTSWDTAASDHAALWVEVD 379 >gi|239945508|ref|ZP_04697445.1| putative phospholipase [Streptomyces roseosporus NRRL 15998] gi|239991973|ref|ZP_04712637.1| putative phospholipase [Streptomyces roseosporus NRRL 11379] gi|291448965|ref|ZP_06588355.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998] gi|291351912|gb|EFE78816.1| sphingomyelinase C [Streptomyces roseosporus NRRL 15998] Length = 326 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 41/211 (19%) Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCF 169 + + K V ++ + A + A + + +NG ++ V+ H +S C Sbjct: 129 GVTILSKWPIVRKEQFVFKDACGGDWFSNKGFAYAV-LNVNGTRVHVVGTHAQSTDPGC- 186 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFN---RKINYLGNNDDFW 225 + + + S+Q + + ++ K + V+AGDFN Y D Sbjct: 187 ------SAGEAAQMRSRQFKQMDAFLDAKNIPASEQVVVAGDFNVDGHSAEYASFLADAG 240 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRN--KIPIDYF---------------VMDQNAYK 268 T + + + + A++ + + +D+ V+ + + Sbjct: 241 LTTPDSRTGHTYSFDTRDNSIASERYPDDPREDLDHVLHRTGHAKPTGWKNDVIKEQSAP 300 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + + Y LSDH P+ Sbjct: 301 WTVSSWGKKYTYTN---------LSDHYPVI 322 >gi|146319622|ref|YP_001199334.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|146321820|ref|YP_001201531.1| DNA nuclease [Streptococcus suis 98HAH33] gi|145690428|gb|ABP90934.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|145692626|gb|ABP93131.1| DNA nuclease [Streptococcus suis 98HAH33] gi|292559239|gb|ADE32240.1| DNA nuclease [Streptococcus suis GZ1] Length = 1059 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 91/326 (27%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 644 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 697 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 698 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 756 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 757 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 816 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY 217 L S + L P ++ L I ++ + V+ GDFN Sbjct: 817 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYEFT 876 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N + + Sbjct: 877 KTI-----EILEAGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFD---- 927 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 928 MVHVNSAFMEEHGRASDHDPLLVQLD 953 >gi|332976281|gb|EGK13142.1| hypothetical protein HMPREF9373_1351 [Psychrobacter sp. 1501(2011)] Length = 1300 Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 90/288 (31%), Gaps = 52/288 (18%) Query: 54 YTLLRQYAKNLDADIVFLQEM-------GS-----YNAVAKVFPKNTWCIFYSTERLINH 101 L + LDAD+V L E+ S +A+ +T+ + Sbjct: 638 LDKLVSMIQGLDADVVGLMEIQNNGYGEDSAIKALVDAINARLGADTYD-YIKGPFNNGS 696 Query: 102 SKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIW 158 N+ I + + V P +F+ GNR + E N G++ Sbjct: 697 ESTAGNDAIMVGMIYKPANVTPVGSAVVPDTDEYPAFAN-GNRVPLAQAFESNKDGEQFS 755 Query: 159 VLDIHLKS-FCFLDSLENTYSPSCSLLSQQA-QWLKDWITQ--KKESLVPFVIAGDFNRK 214 V+ H KS +D + + + +A Q LK W+ V+ GDFN Sbjct: 756 VVVNHFKSKGSVIDPDQQDGQGNNPITRLEAAQQLKQWMDTDPTGTGDTDNVLIGDFNSY 815 Query: 215 -----INYLGNN-------------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + YL N+ D W ++D + + N Sbjct: 816 TMEDSLQYLENSGYDIQKEGFSYVFDGLWGSLDHVITSESMSDQITGVATWGINAEEATA 875 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 DY + + + LY D R SDH P+ I + Sbjct: 876 FDY--------NTNFKGNGQKGLYAPD-----AYRASDHNPVLIGLNL 910 >gi|325123873|gb|ADY83396.1| catabolite repression control protein [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 32 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 81 AIYSRLPFVSVKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 133 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 134 EAQARKDL---FLGEYAKILKQW----RDENKSVIICGDYN--IVHKRIDIKNWSG---- 180 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 181 -------NQKSSGCLPHE----RAWLDHI 198 >gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 247 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 86/274 (31%), Gaps = 50/274 (18%) Query: 39 GVSLWKNSVKRTTS-DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTER 97 ++ K R ++ ++ + DI+ LQE+ + N I S Sbjct: 5 SYNIQKGYGGRDRRYNFERTIAAIEHENPDIIVLQEVDHNE--RRTRFDNQPEI-LSDYF 61 Query: 98 LINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---FSRAGNRRAVELLVEING 154 + N+ + +L +P R A ++V+ Sbjct: 62 RYEATDYQFNHRVSKG-----GYGNLLISRFPFHSVTQVCLKLKHRKKRGAQVVVVDSPE 116 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 K+ ++ HL L+ + Q L D + + +P +I GDFN Sbjct: 117 GKLLLVGWHL-------GLKEKQRHA------QVNHLLDHVDLQDNLDLPTLIVGDFND- 162 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 W+ + + E+ +R R + Y + + ++ Sbjct: 163 ----------WRNTLADGPFAKHGFEQLTR----PPSRYRTFPAYLPIGS------LDKA 202 Query: 275 FSEILYNEDDIKSRGKRL----SDHCPISIDYDF 304 F N D++ +L SDH P+ +D+ Sbjct: 203 FCRGPINVRDVRVVRNQLTKEASDHLPLLVDFHL 236 >gi|156973843|ref|YP_001444750.1| exonuclease III [Vibrio harveyi ATCC BAA-1116] gi|156525437|gb|ABU70523.1| hypothetical protein VIBHAR_01553 [Vibrio harveyi ATCC BAA-1116] Length = 268 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQALIDKHQPDVIGLQEI-------KVHDEA---FPIEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ +Q+ +P + R + + NG+K+ VL+ + D++ Sbjct: 67 MLCKQEPISVQKGFPTDNEEHQK-----RMIMATFEDENGEKVTVLNGYFPQG---DNIA 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q + L ++ + ++ GD N I N W Sbjct: 119 HETK---YPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L ++ + N R ID ++ Sbjct: 176 GKCSFQPEEREWLKTLLDWGFEDTFRNLHPEVNDRFSWFDYRSRGFDDNRGLRIDVILVT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + K ++ + D ++ SDH PI Sbjct: 236 PSLAKKCVES-------DIDYELRGIEKPSDHAPI 263 >gi|329956608|ref|ZP_08297181.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328523980|gb|EGF51056.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 374 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 103/308 (33%), Gaps = 80/308 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ +S+NI + V + + Y K +ADI+ LQE S + Sbjct: 108 ESIKFLSYNI--MGFNGAVKKDGKNP---------ILTYLKESNADILCLQEYASDESPR 156 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 ++ K+ E R S + N +P+L A+ +G Sbjct: 157 RLTQKD-----IERELKDYPYHRISVVGSGSGY----TNKIACYSKFPILSARVLNYPSG 207 Query: 142 NRRAVELLVEINGKKIWVLDIHL-------------------------KSFCFLDSLENT 176 +V +++N I +++ HL KS L L + Sbjct: 208 YNGSVLYELKLNEDTITLINNHLESNKLTKADKDIYEDILKAPEKEKVKSGARL--LVHK 265 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPF---VIAGDFN-RKINYLGNNDDFWKTIDPND 232 + + ++ + QA + ++ + + ++ GDFN I+Y + + +D Sbjct: 266 LAEASAIRAPQADTI-----AREIASSRYPSVIVCGDFNDTPISYA--HRVIAQNLDD-- 316 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN--AYKFLIQESFSEILYNEDDIKSRGK 290 F + + + ID ++ +N +Y + S E Sbjct: 317 ---AFTQSGRGLGISYNQNKFYFRIDNILISKNLQSYNCTVDRSIKE------------- 360 Query: 291 RLSDHCPI 298 SDH PI Sbjct: 361 --SDHYPI 366 >gi|322517552|ref|ZP_08070421.1| RgfB protein [Streptococcus vestibularis ATCC 49124] gi|322123812|gb|EFX95386.1| RgfB protein [Streptococcus vestibularis ATCC 49124] Length = 271 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 40/181 (22%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + S + Sbjct: 20 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLLVEKLAE 79 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 80 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTSSEILVSDVDDPTDYHTRRVAVAET-T 137 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 ++G+++ V +HL + E C + P ++AGDF Sbjct: 138 VDGREVAVASVHLSWWDKGFQEEWARIEGCF----------------QSIGKPLILAGDF 181 Query: 212 N 212 N Sbjct: 182 N 182 >gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20] gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] Length = 250 Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DADI +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADIFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQDQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W + ++ + Sbjct: 76 VSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMSWEVEFRKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|255066148|ref|ZP_05318003.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] gi|255049693|gb|EET45157.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] Length = 256 Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 97/305 (31%), Gaps = 73/305 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L+ + ++ + + D++ LQE Sbjct: 1 MKITTWNVNSLNVR----------------LPQVQNWLADHQPDVLVLQE---------- 34 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + +++ S + +A + + + + P L Sbjct: 35 LKLDQDKFPAAALQMMGWHSVWSGQKTYNGVAIISRSEPQDVHVGLPTLPDD------PQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 RR + V + V++++ + LDS + Y Q L +++ + Sbjct: 89 RRVIAATV----NGVRVINVYCVNGEALDSPKFLYKE------QWFAALTEFVRDEMTRY 138 Query: 203 VPFVIAGDFN--------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GDFN + + + + W + L ++ Sbjct: 139 EKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPEGAFY 198 Query: 249 KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ L +Y + D ++ +R SDH P+ Sbjct: 199 TWFDYRGAMFQRKLGLRIDHQLISPALSAVLKD------VYVDLDARA-QERPSDHAPVV 251 Query: 300 IDYDF 304 ++D Sbjct: 252 AEFDL 256 >gi|76818418|ref|YP_336092.1| extracellular nuclease [Burkholderia pseudomallei 1710b] gi|76582891|gb|ABA52365.1| Extracellular nuclease [Burkholderia pseudomallei 1710b] Length = 514 Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYT-------LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 184 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIE 243 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 244 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 293 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 294 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 353 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 354 TRSRAAAKIADWL-ARNPTGAPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 407 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 408 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 467 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 468 TYYAPD----AYRSSDHDPVLIDI 487 >gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] Length = 254 Score = 42.4 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 84/307 (27%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAKV 83 + VSWN+N + ++ + L+ DI+ LQE+ S + Sbjct: 5 KFVSWNVNGIRAALKKGFMES---------------FEELNPDIIGLQEIKLSEGQLDLE 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + ++++ +S TA+ R++ + V Sbjct: 50 IPG--YHMYWNYAEKKGYSG--------TAVFTREEPLSV-------------------- 79 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT--QKKES 201 + + +E + K+ V+ + + F+ + L + +W + ++ + + Sbjct: 80 -SYGIGIEEHDKEGRVITLEYPEYYFITCYTPNSQRGLARLDYRMEWEEAFLEYLNRLDE 138 Query: 202 LVPFVIAGDFN--RK---INYLGNN--DDFWKTIDPNDSLIRFPKEKDSRCN---ANKNL 251 + P V+ GD N + +N + + + + +K Sbjct: 139 VKPVVLCGDLNVAHNEIDLKNPESNRKNAGFSDEERDKFTKLLEAGYTDTFRYLYPDKED 198 Query: 252 RNKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 IDYFV+ + +++ S + SDHCP Sbjct: 199 EYSWWSYFRQARDRNIGWRIDYFVVSKVLEDKIVEASIHQ-----------NIMGSDHCP 247 Query: 298 ISIDYDF 304 +S++ + Sbjct: 248 VSVELNL 254 >gi|153836353|ref|ZP_01989020.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] gi|149750255|gb|EDM61000.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] Length = 317 Score = 42.4 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 88/308 (28%), Gaps = 30/308 (9%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR---QYAKNLDADIVFLQEMGSYNA 79 ++ V+ N+ ++ L + L+ DI+ LQE+ S Sbjct: 6 RITFVTANLFNFVAPPNAYYDFENIYSQEQWRDKLAWTQNQLEKLEPDIIGLQEVFSIEE 65 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F + F + + + AIA R V + Sbjct: 66 TRTYFLSLGFPYFATVDT-PKIEDEYIYSRPVVAIASRFPIEDVKPVEFDSNSLTPFGVN 124 Query: 140 AGNRRA----VELLVEINGKKIWVLDIHLKSFCFLD--SLENTYSPSCSLLSQQ-----A 188 + +V I + HLKS D + E + LS Q A Sbjct: 125 EAPDFSRKPIYAQVVHPVLGHIAIYVTHLKSQRPADTETPEPSSRVMARWLSTQQRGWEA 184 Query: 189 QWLKDWITQK-KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN------DSLIRFPKEK 241 L+D + + + +P V+ GD N+ I+ N+ +T + Sbjct: 185 AMLRDAMQAQYRAHPIPTVLMGDMNQPISKKSVNNVLTETFSDSVTELQLKDGWNLQTGS 244 Query: 242 DSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYN--EDDIKSRGK----RLS 293 + +DY ++ Q I Y E + + S Sbjct: 245 SLEIRPATHYHFSTGNVLDYILLSQEFDTHSDVSVAEVIDYQVLEQHLINPSYEKDKNAS 304 Query: 294 DHCPISID 301 DH +S+ Sbjct: 305 DHAFVSLT 312 >gi|285017645|ref|YP_003375356.1| hypothetical protein XALc_0850 [Xanthomonas albilineans GPE PC73] gi|283472863|emb|CBA15368.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 255 Score = 42.4 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 79/296 (26%), Gaps = 58/296 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVS-------LWKNSVKRTTSDYTLLRQYAKNLDADI 68 TA + +R+++ NI S S R + + Q A DI Sbjct: 1 MTAPATRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPAGRKRNSLDTIAQLASAH--DI 58 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V LQE ++ F T + + ++ N + +A + + Sbjct: 59 VGLQE-SDPGSLRSGFTNQTH--YLAERAGFHYWSHQPNRRVG-GVASSANGLLSRLEPL 114 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + R G R + + + + HL + Sbjct: 115 EVQDHA-LPGRLGGRGVLLAKFGDGNEGLAIAVAHLSLGATS-----------RTMQL-- 160 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 +I + ++ GDFN + + + L + C Sbjct: 161 ----AFIAELLADHPNAILMGDFN-----CVADRPEMQLLYQRTRL------QPPACVVP 205 Query: 249 KNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + ID+ ++ + L + + SDH ++ + Sbjct: 206 TFPSWRPQRAIDHILLSDS----LRCNAHRAVP----------AAFSDHLALTTEI 247 >gi|170758666|ref|YP_001787187.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169405655|gb|ACA54066.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 352 Score = 42.4 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 101/307 (32%), Gaps = 70/307 (22%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E NGK++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRVSLE-NGKELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS--LIRFPKE-------------- 240 ++ + ++ GD+N + D L + P + Sbjct: 240 KEYKKGNYIIVGGDWNH---LIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKDV 296 Query: 241 --KDSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + K ID F++ N E+ S Y+ + + +DH P Sbjct: 297 PTTRTDARPYKKGENFTAVIDGFLVSDNI------EATSVKAYSME------FKNTDHNP 344 Query: 298 ISIDYDF 304 + +++ Sbjct: 345 VKMEFKL 351 >gi|299755652|ref|XP_001828796.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130] gi|298411320|gb|EAU93062.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130] Length = 443 Score = 42.4 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 58/230 (25%) Query: 24 VRLVSWNI--NTLSEQEGVSLWK--NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 +++++WNI L +E +R ++ Q + LDAD++ LQE+ + Sbjct: 65 LKILTWNILAQCLVRRELFPTSNCLKVGQREP----MIHQEIQRLDADVLCLQEVDRMDK 120 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + + Y+T H IA + ++ +D S Sbjct: 121 LGPMLEAAGYSYRYATGPKKLHGCL---------IAFKASKFVFDEEKVVYYDDEDVRSE 171 Query: 140 AGNRR-----------AVELLVEINGKKIWVLDI---HL-----KSFCFLDSLENTYSPS 180 G + + V+ + + + HL ++ + + + Sbjct: 172 GGEAHRRGKSFQTRNIGLIVAVKRKENPVHGVIVSTTHLFWHPRQAGILVREVARFKAID 231 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L +Q +W P ++AGDFN +D + + Sbjct: 232 ---LGRQ-----NW---------PCIMAGDFN-----FPPDDPGYSLLTG 259 >gi|269217995|ref|ZP_06161849.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848 str. F0332] gi|269212930|gb|EEZ79270.1| putative extracellular nuclease [Actinomyces sp. oral taxon 848 str. F0332] Length = 897 Score = 42.4 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 99/288 (34%), Gaps = 51/288 (17%) Query: 55 TLLRQYAKNLDADIVFLQEMG-----------SYNAVAKVF----PKNTWCIFYSTERLI 99 + LDA +V L+E+ S A+ K + W S ++ Sbjct: 366 QKIVSAIAGLDASVVSLEEIETSSKFGHDRDASLAALVKALNERAGREQWAYVPSPSKVP 425 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-----RAVELLVEING 154 S + I A +K V + +S L G K+ A RA++ G Sbjct: 426 -----ASEDVIRLAFVYQKGKVEPVGESRILTGNKEFTGYAREPMGQEWRALDAAGAPRG 480 Query: 155 KKIWVLDIHLKS-FCFLDSLENTYSP----SCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + V+ H KS + N P + L + QA+ L W ++ + F++ G Sbjct: 481 EAFAVVANHFKSKGSLASAYPNDGDPYQGNNNRLRTAQAKALAQWAKEQYGNRPTFLV-G 539 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN +Y D D S +R + ++ + +D+ + + A + Sbjct: 540 DFN---SYSAE-DPILALRDAGYSEVRDSIGRAD--HSYQFGGAVGSLDHVLANDAARRM 593 Query: 270 LI-------------QESFSEILYNEDDIKSRGK-RLSDHCPISIDYD 303 + +S YN + G R SDH P+ + + Sbjct: 594 VAGADVWSVNAMESPAFEYSRNNYNVKQLWDGGPFRSSDHDPVKVGVN 641 >gi|32476790|ref|NP_869784.1| hypothetical protein RB11105 [Rhodopirellula baltica SH 1] gi|32447336|emb|CAD77162.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 286 Score = 42.4 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 96/305 (31%), Gaps = 68/305 (22%) Query: 5 YVLALVFFLVPCTASVAQKV----RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 ++A+ + S A++ R++S+NI + + K + RT Sbjct: 30 LLIAIATLIAMPGESSAEETNSSHRVLSYNIK----RGYGNDGKTDLPRT-------ADV 78 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L D V LQE+ + + W + D + + +A+ Sbjct: 79 ISKLKPDFVGLQEVDERCNRSGKVDQAQWLGEHLDMHAAFAPFMDYDGGRY-GMAI---- 133 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLKSFCFLDSLENTY 177 YP+ + G V L+ +G K+ ++++H D + + Sbjct: 134 ----LSRYPIEKTESVELARGREPRVALVAHVTLPDGNKLTLVNVHF------DYIRDDT 183 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---NDDFWKTIDPNDSL 234 +QA ++++I P ++ GDFN D F + P D Sbjct: 184 VR-----FEQATKVREFIRSLSN---PAILLGDFNDTPESRTVQLFQDGFVEADKPADDS 235 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-S 293 F EK R ID+ E + + + L S Sbjct: 236 FTFSAEKPDR-----------EIDFLFASP------------ETQWTVKTVDVIDEPLAS 272 Query: 294 DHCPI 298 DH P+ Sbjct: 273 DHRPV 277 >gi|295689833|ref|YP_003593526.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431736|gb|ADG10908.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 283 Score = 42.4 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 44/258 (17%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + DI+ +QE + ++ P + + + + I Sbjct: 55 MARQISFFSPDILGVQEALVPMVADLSAALPG--YAHYGVGRDDGDKAGET--TTIFYRS 110 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI---HLKSFCFLD 171 A ++ + + P A R +V + +LD+ HL D Sbjct: 111 ARFERLLAQTRWCSPTPERPGKAYDAALPRTYARVVLRDRASGVLLDVRNAHL------D 164 Query: 172 SLENTYSPSC-SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------ 224 + C L Q W V+ GDFN +D Sbjct: 165 HVGAESRRLCARQLRDQPTW----------PGARLVVLGDFNSAPGEP-PHDVLTSGGDG 213 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + ++ P + + PIDY +D+ + + + Sbjct: 214 LRDARAASPIVFGPAGTFNDFSPGAPPVG--PIDYVFVDR---------ALQVLRFATLT 262 Query: 285 IKSRGKRLSDHCPISIDY 302 G +SDH PI + Sbjct: 263 DTEGGVAISDHFPIIVQI 280 >gi|260173205|ref|ZP_05759617.1| hypothetical protein BacD2_15145 [Bacteroides sp. D2] gi|315921479|ref|ZP_07917719.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695354|gb|EFS32189.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 608 Score = 42.4 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 11/75 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L + L +RL+++NI + + + ++ + Sbjct: 1 MKKIFLLISVILFIFPVQAQHTLRLMTYNIKNANGMDDIC-----------NFQRVANVI 49 Query: 62 KNLDADIVFLQEMGS 76 N D+V +QE+ S Sbjct: 50 NNASPDVVAIQEVDS 64 >gi|167829209|ref|ZP_02460680.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 9] Length = 624 Score = 42.4 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 65/324 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDY-------TLLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R +Y + K LDAD++ L E+ Sbjct: 294 LRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYDEFVRQDAKIVSALKALDADVIGLMEIE 353 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKR-----DSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + +L D + A+ + ++ P+ Sbjct: 354 ----------NDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPI 403 Query: 131 LGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FCFLDSLENTYSPS---C--S 182 A NR+ + + + V HLKS C + ++ C + Sbjct: 404 GNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNA 463 Query: 183 LLSQQAQWLKDWITQKKESLVP---FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 S+ A + DW+ + + P ++ GD +N D +T++ + Sbjct: 464 TRSRAAAKIADWL-ARNPTGTPSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVSS 517 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSEI 278 + S + +D+ + Y + + + Sbjct: 518 KVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQR 577 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 578 TYYAPD----AYRSSDHDPVLIDI 597 >gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1] gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1] Length = 250 Score = 42.4 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFRGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|29348040|ref|NP_811543.1| hypothetical protein BT_2630 [Bacteroides thetaiotaomicron VPI-5482] gi|260172059|ref|ZP_05758471.1| hypothetical protein BacD2_09356 [Bacteroides sp. D2] gi|293371640|ref|ZP_06618051.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|315920369|ref|ZP_07916609.1| conserved hypothetical protein [Bacteroides sp. D2] gi|29339942|gb|AAO77737.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Bacteroides thetaiotaomicron VPI-5482] gi|292633337|gb|EFF51907.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|313694244|gb|EFS31079.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 316 Score = 42.4 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 101/328 (30%), Gaps = 45/328 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLL 57 ++ +L + +V C + + + S+N+ + G S+ N +R Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLR--NANGGDSINGNGWGQR----YPVI 56 Query: 58 RQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 Q + D DI QE + + + P + + Sbjct: 57 AQIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 116 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + + + D+ + G + ++H+ + Sbjct: 117 IEKGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKK 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN 231 S L+ + + L +P ++ GDFN + + Sbjct: 171 ARVESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEK 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL--------- 279 + + N ++ ID+ + + ++ +++ I+ Sbjct: 225 AGFRYAINGTFNDFDPNSFTESR--IDHIFVSPSFQVKRYGVLTDTYRSIVGKGEKKQAN 282 Query: 280 --YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ +F Sbjct: 283 DCPEEIDIKTYQARTPSDHFPVKVELEF 310 >gi|49183387|ref|YP_026639.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|165870723|ref|ZP_02215376.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167634744|ref|ZP_02393063.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|167641246|ref|ZP_02399499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|170688988|ref|ZP_02880189.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|170707115|ref|ZP_02897571.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|177654552|ref|ZP_02936408.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190567531|ref|ZP_03020444.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227813041|ref|YP_002813050.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|254686762|ref|ZP_05150620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|254724838|ref|ZP_05186621.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254739015|ref|ZP_05196717.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254744602|ref|ZP_05202281.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|254756141|ref|ZP_05208170.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254761959|ref|ZP_05213808.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177314|gb|AAT52690.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|164713557|gb|EDR19081.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167510754|gb|EDR86147.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|167529818|gb|EDR92566.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|170127893|gb|EDS96764.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|170667089|gb|EDT17851.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|172080664|gb|EDT65747.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190561318|gb|EDV15290.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005247|gb|ACP14990.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] Length = 263 Score = 42.4 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E L Q L ++ +S + GDFN G Sbjct: 140 HL--GWWNDEEE--------LFKGQVNRL----MERVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ D+ ++ + + ++ + ID + Sbjct: 186 EYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|229028217|ref|ZP_04184357.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228733091|gb|EEL83933.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 263 Score = 42.4 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 39/258 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + D D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEDYDVIALQEVSQSIQAENVCGHKKKDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + +L + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAILTKHNVIKEDTFFVSENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L ++ + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVDRL----MERVNRDELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSE 277 ++ D+ ++ + + ++ + ID + +Q+ S Sbjct: 186 EYMMQKGLYDTYELAAEKDEGTTVQGEIAGWDKNKHNLRIDLILCNQSEKVR----SSKV 241 Query: 278 ILYNEDDIKSRGKRLSDH 295 I + + +SDH Sbjct: 242 IFNDTN-----RNVISDH 254 >gi|167763327|ref|ZP_02435454.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC 43183] gi|167698621|gb|EDS15200.1| hypothetical protein BACSTE_01701 [Bacteroides stercoris ATCC 43183] Length = 372 Score = 42.4 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 101/359 (28%), Gaps = 90/359 (25%) Query: 8 ALVFFLVPCTASV-------AQKVRLVSWNINTL------SEQEGVSLWKNSVKR----- 49 AL+ +A + R++ +N+ L + + ++V+R Sbjct: 28 ALMLLAFLTSAPLHGQEKKDTLTFRIMGYNVENLFDCRHDTLKNDRDFLPDAVRRWNYTK 87 Query: 50 TTSDYTLLRQYAKN----LDADIVFLQEMGSYNAVA-----KVFPKNTWCIFYSTERLIN 100 + + +V L E+ + + + V + + + Sbjct: 88 YKKKLNAIARVIIAAGKWTPPALVALCEVENDSVLRDLTRYSVLREAGYRYVITHSP--- 144 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGNRRAVELLV----EINGK 155 I+ A+ ++ ++L +SYP++ R NR ++L +N Sbjct: 145 -----DERGINVALLYQRGIFKLLSNRSYPVM-----KPRRNNRPTRDILHVSGQLLNSD 194 Query: 156 KIWVLDIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 + V +H +S S + + L L + + +I GDFN Sbjct: 195 TLDVFVVHFPSRSGGAKASEPYRLAAA-QRLKDTTDSL-----LRIRTRPQIIIMGDFND 248 Query: 214 KINYLGNNDDFWKTIDPNDS--------LIRFPKEKDSRCNAN--KNLRNKIPIDYFVMD 263 + I P ++ ++ + K +D+ ++ Sbjct: 249 YSDNKSIQKILKAGIPPTETDSLDSRTLYHLLARKGIDNKHFGSYKYQGEWGLLDHIILS 308 Query: 264 QNAYKFLIQESF------------------------SEILYNEDDIKSRGKRLSDHCPI 298 N L+ S E + SDH P+ Sbjct: 309 GN---LLMPGSPLYTAEEKAGVFRAPFLLTEDRKYGDEQPFRTYYGMKYQGGYSDHLPV 364 >gi|297283268|ref|XP_001084351.2| PREDICTED: deoxyribonuclease-1-like 2-like [Macaca mulatta] Length = 281 Score = 42.4 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ D + ++ + Sbjct: 170 LDVIDKW------GTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVG 223 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V + L +S + + E+ + + L SDH P+ + Sbjct: 224 NSDCAY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTL 277 >gi|330901156|gb|EGH32575.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 219 Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 55/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGGSRDHPTKFPAKQRFYENLQTLLEGQFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|320535908|ref|ZP_08035979.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320147245|gb|EFW38790.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 255 Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 101/298 (33%), Gaps = 67/298 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++V++NI + +G + + + R ++ + + DI+ QE+ + Sbjct: 1 MKIVTFNIRYDNPDDGKNAF---IHRKSNIIEAINAH----KPDIIGFQEVLPHVSAWLK 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAKD 135 + FP+ + I H + ++ +D H + +K + ++ P + Sbjct: 54 EQFPE-YYFI--------GHGRSENFSDEHIVLGYKKMDYQLHHFRTFWLSPTPQVPGSR 104 Query: 136 SFSRA-GNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 ++ R + + E + ++ V + HL + + + Q Sbjct: 105 YTEQSICPRICIHAIFETDRHRLFSVYNTHL-----DHEGVDARVKALQQIMQD------ 153 Query: 194 WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI--------DPNDSLIRFPKEKDSRC 245 I + +P V+ GDFN D+ + D N L K+ Sbjct: 154 -IDSFSKPTLPTVLMGDFN-----AKPTDEELHVLKEFKIKENDKNLQLNDLTKDIRGSF 207 Query: 246 N--ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + N IDY +L N +++ LSDH P+ ++ Sbjct: 208 HDFGNCT---PEKIDYIFATP-----------EFLLQNYSVWENKAGFLSDHYPLEVE 251 >gi|294668724|ref|ZP_06733817.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309241|gb|EFE50484.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 250 Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 99/293 (33%), Gaps = 54/293 (18%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI +G+S V+ + + Q ++L DI+FLQE+ N + Sbjct: 2 TEPITIATYNI-----HKGMSPLNRKVQ-----ISDMAQALESLKPDILFLQEVQGQNLL 51 Query: 81 AKV----FP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 ++ FP I ++ K H A+ + ++Q+ Sbjct: 52 RELKLPDFPARPQDNIIADHLAYYTSYGKNAVFPQKHHGNAILSRLPMQMRQNV-----N 106 Query: 135 DSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S +R R + + +G I L HL + LE +Q + Sbjct: 107 ISVNRLEKRGVLHCEILPDGWEMPIVCLCAHL------NLLERDRV-------KQYVAIF 153 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-CNANKNL 251 +++T P ++AGDFN D K+ S + + R K Sbjct: 154 EYVTTYIPPEAPLILAGDFN---------DWRHKSTLNIGSTLGLTEVFLDRHGELPKTF 204 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++P+ + + + + + LSDH P+S Sbjct: 205 PARMPV-------LSLDRIYTRNLDILNATLHSEEPWQY-LSDHLPLSATVRM 249 >gi|5545327|dbj|BAA82542.1| DNase [Actinobacillus actinomycetemcomitans] Length = 278 Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 72/201 (35%), Gaps = 38/201 (18%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++P + Q ++++S+NIN L + L + D++ LQ Sbjct: 1 MLPQHKAKEQNMKIMSFNINGLRARPH----------------QLEEIINKYQPDVLGLQ 44 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLL 131 E+ +VFP + + + L H H +A + K+ +++ +P Sbjct: 45 EI---KVADEVFP---YDLV---DHLGYHVNHF-GQKGHYGVALLSKQAPLSVRKGFP-- 92 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + +R + + +E ++ V++ F + + L Sbjct: 93 ----TDDEEAQKRIIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADL 143 Query: 192 KDWITQKKESLVPFVIAGDFN 212 + ++ Q + P +I GD N Sbjct: 144 QRYLEQDHNAQNPVIIMGDMN 164 >gi|163938364|ref|YP_001643248.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163860561|gb|ABY41620.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 263 Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 81/267 (30%), Gaps = 41/267 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKR----- 104 L + + D D++ LQE+ V F R +N + Sbjct: 20 IKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNIIWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 D++ +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTY-WKTRKIVSATIAYNDKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEG 184 Query: 222 DDFWKTIDPNDSLIRFP---KEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFS 276 ++ D+ + + NK ID + +Q+ S Sbjct: 185 YEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKQNLRIDLILSNQS----KTVNSSK 240 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 I + +SDH + + D Sbjct: 241 VIFNGTN-----RNVISDHFGVEVQLD 262 >gi|320162722|gb|EFW39621.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 517 Score = 42.4 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 44/253 (17%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDADIVFLQE 73 + +R+ S+NI E + K ++ R T +D+ L++ + D Q Sbjct: 208 PVLQHGIRVASFNIRNF--VEPWEIRKAAIARQLRATHADFIGLQE--LRVLPD----QS 259 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 MG +A++ P+ + F + + L I + + K+ +S + Sbjct: 260 MGQLEQLAQLLPEYRFTHFQAAQTLSGE--------IIEGLGILSKHPLEHIESLAINPH 311 Query: 134 KDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 S R + + ++ ++ V HL C ++Q + W++ Sbjct: 312 PQLSSDTNARVCLRVDLDIPKLGRVEVFVAHL---------SFDAGEQCRQIAQVSHWME 362 Query: 193 D-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 W + + ++ GDFN ++ + D + P C A + Sbjct: 363 STWQSTRASQ----ILLGDFNVYFDFEWSIDPLTARSRDAKDFLASPLN---PCAAAYSQ 415 Query: 252 RNK------IPID 258 + ID Sbjct: 416 QFPFHLPEHSFID 428 >gi|163786792|ref|ZP_02181240.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium ALC-1] gi|159878652|gb|EDP72708.1| hypothetical protein FBALC1_16442 [Flavobacteriales bacterium ALC-1] Length = 316 Score = 42.4 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 89/324 (27%), Gaps = 57/324 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNS-----------VKRTTSDYTLLRQYAKNLD---- 65 ++ + +NI L + E L + KR + L + Sbjct: 5 SETYTIAFYNIENLFDIENDPLTNDDDFLPTSAKRWTPKRYQNKLMKLGTVISKIGEENT 64 Query: 66 ---ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 IV L E+ + V+ + H I A+ + + Sbjct: 65 EIAPVIVGLAEVENSKVVSDLVRSKN---LIDQAYSYIHYDSSDERGIDVALLYKSDVFK 121 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFL-DSLENTYS 178 V ++L+ +K+ ++ H S E Sbjct: 122 VENSE--TFSVYLQDELGKQDYTRDILLVQGELYNEKLNIIVNHWSSRREGEKETEFKRI 179 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + + ++ + LK K+S ++ GDFN ND+ ++ L Sbjct: 180 AAANKVNSIIRTLKQ-----KKSSAKIIVMGDFNDN-----PNDNSLSLLEKESELYNPF 229 Query: 239 KEKDSRCNANKNLRNKI-PIDYFVMD-------QNAYKFLIQESFSEI------------ 278 K SR ++N + D + +A F + F+ Sbjct: 230 KTVWSREKGSQNYNFQWNLFDQILFSTNFFDANNSALDFDSADVFNSKFLTQYHGKYKGQ 289 Query: 279 LYNEDDIKSRGKRLSDHCPISIDY 302 + K SDH P+ I Sbjct: 290 PFRTYVGKKYKGGYSDHFPVYIRL 313 >gi|313244439|emb|CBY15231.1| unnamed protein product [Oikopleura dioica] Length = 524 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 107/302 (35%), Gaps = 58/302 (19%) Query: 25 RLVSWNINTL-----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGSYN 78 + S+NI S++ + +KR D + +++ + ++ + + N Sbjct: 256 KFSSFNIQVFGNTKYSKEPVKNQIVEILKR--YDISTIQEIRDSTES---AFPKLVDDIN 310 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 A ++ + F + SK I R ++ + D+ + Sbjct: 311 AA-----EDKYDWFTGERQGTTSSKEQIGF-----IWDRNMFSKIDGYDF-----NDTAT 355 Query: 139 RAGNRRAVELLVEING--------KKIWVLDIHLK--SFCFLDSLENTYSPSCSLLSQQA 188 R L++E + +K+ ++ HLK + EN + Sbjct: 356 SWFERPPTVLVLERSSVNAPNFKTQKLAIISAHLKPATGVTNMDTENEINH--------L 407 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + +++ + + ++ +IAGDFN +Y+ + +D +D+ E D+ ++ Sbjct: 408 KDVENDLRARHPTVNDVIIAGDFNADCDYVRDPEDL-TLFSESDNSWLISFEDDTTVSST 466 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFS----EILYNEDDI----KSRGKRLSDHCPISI 300 D+ V+ + + S + Y+ D I + +SDH P+ Sbjct: 467 ICAY-----DHIVLSGDIQDNAVAGSGKVFDYQNFYDTDSIFYNGEPITALISDHFPVVF 521 Query: 301 DY 302 ++ Sbjct: 522 EF 523 >gi|159124775|gb|EDP49893.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 439 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 103/319 (32%), Gaps = 46/319 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQY 60 +R + L L +P A+ A + +++ N+ L L N V SD + + Sbjct: 1 MRSFHLVLAAG-IPALAATAGEFNILALNVAGL----PPILNGNDVPGDKSDNSRQIGRK 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE +Y+A + + S I +N T VR K Sbjct: 56 FAEYGYDVIHVQEDFNYHAYIYETDNHPYRTPTSGGAGIGSGLNTLSNFEFTNF-VRTKW 114 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 F+ R G + ++H + D ++ + Sbjct: 115 ATCSNAEGADCLTPKGFTSMRVRV-------DEGVYVDFYNLHADAGSKDDDVKARSAN- 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-NDSLIRFPK 239 Q L D+I + ++ GD N + G+N ++T + + + Sbjct: 167 -------LQQLADYIKV-NSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218 Query: 240 EKDSR--------CNANKNLRNKIPIDYFV------MDQNAYKFLIQESFSEILYNEDDI 285 + + C + +D +D A + + + + Sbjct: 219 QGAAPAEGSNALLCQNPSTTNDCETVDKIFYRGSRAVDLRAVFWNYESN--------KFL 270 Query: 286 KSRGKRLSDHCPISIDYDF 304 +G LSDH PI+ ++ + Sbjct: 271 SDKGTILSDHNPITTNFTW 289 >gi|71281061|ref|YP_269348.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] gi|71146801|gb|AAZ27274.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] Length = 1310 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 103/332 (31%), Gaps = 64/332 (19%) Query: 21 AQKVRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQ 72 + +++ S+N+ L+ + R + + + +ADIV L Sbjct: 929 SGSLKVASFNV--LNYFNGDGAGQGFPTARGADTLEEFTRQSSKIVSALKEINADIVGLM 986 Query: 73 EM-----GSYNAVAKVF-------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ S +A+A + + T+ + + + I I + Sbjct: 987 ELENDGFDSNSAIADLVKQLNSQVGEGTYNYVSLDQTGVG------GDAIAVGIIYKPAT 1040 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS--FCFLDSLENT 176 V ++ + S GNR+ + + + +++ + H KS C S N Sbjct: 1041 VGIVGNAV---TTNQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNL 1097 Query: 177 YSPS---C-SLLSQQAQW-LKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 C + L QA L W+ K S F+I GD +N G D I Sbjct: 1098 DQGDGQGCWNELRTQAANGLTAWLNTKPTGTSDDDFLIIGD----LNAYGKEDPI-NAIT 1152 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288 ++ S + +D+ + ++ + I +E I Sbjct: 1153 NSNYHNLVADYMGSTGYSYSFGGEIGYLDHALASDKLASQVVDTTVWHINADEPRIFDYN 1212 Query: 289 ----------------GKRLSDHCPISIDYDF 304 R SDH P+ + + Sbjct: 1213 TEYKSSEQLSTYFAEDAYRASDHDPVIVVLNL 1244 >gi|300311792|ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300074577|gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 49/209 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75 + + ++NI V + L AD+V LQE+ Sbjct: 35 PLTVATYNI-----HGAVGTDGRFAP------ERVAAVLDELQADVVALQEVPLGGADQV 83 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ + +F + + R AV + + +S L Sbjct: 84 DVLALLRAHTG----MFAAEGPTMESPAR------RYGNAVLSRYPILATESIDL----- 128 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SF R A++ ++ G+ + V+ HL L+ + Q + L Sbjct: 129 SFGSREPRGALDADIDCRGQLLRVVATHL-------GLKPAERRA------QIKRLLQAF 175 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + P ++ GD N + Sbjct: 176 DT---NDAPVILLGDVNEWFMWGRTLRWL 201 >gi|256784304|ref|ZP_05522735.1| hypothetical protein SlivT_07438 [Streptomyces lividans TK24] Length = 276 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 87/309 (28%), Gaps = 67/309 (21%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + +R+ ++NI+ + +GV D + LDAD++ LQ Sbjct: 10 ALAADRGHSVPLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQ 58 Query: 73 EMG------------SYNAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKK 119 E+ + ++ + ++ YS + + +R+ + + VR Sbjct: 59 EVDVHWGARSQGLDLAGELARRLGMRVSFAPIYSLDPVTAGEPRREYGVAVLSRFPVR-- 116 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 L +D E+ +++ G + V HL + Sbjct: 117 --SATNHEITRLSTQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL---------DYRAD 165 Query: 179 PSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 P+ Q + I ++ + + GDFN + WK + + Sbjct: 166 PAVR--RAQVADTRR-IMARERAELPGAHQFLLGDFNAEPAAPELA-PLWKELSDAGAGT 221 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY ++ SDH Sbjct: 222 PATYPAQAPVK---------RIDYVTAGKDVRIRRTA-------------VPEEPAASDH 259 Query: 296 CPISIDYDF 304 P+ D Sbjct: 260 RPVVADVSL 268 >gi|159037690|ref|YP_001536943.1| sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205] gi|157916525|gb|ABV97952.1| Sphingomyelin phosphodiesterase [Salinispora arenicola CNS-205] Length = 318 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 28/226 (12%) Query: 1 MIRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 ++ VLA + A+ A +++++ N+ L + L+ N + T SD Sbjct: 7 LLLAVVLAATGLVASTGAAQAAPAPLKVLTHNVMLLPQS----LYPNWGQVTRSDLISEA 62 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 Y DIV LQEM A ++ + + + + S D+ ++ + Sbjct: 63 DYI--TGRDIVVLQEMFDNEASNRLKDRLAAQYP-YQTPVLGRSRSGWDATMGAYSNVTP 119 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRA------GNRRAVELLVEINGKKIWVLDIHLKS---F 167 V +L + L + ++ N+ V +++NG + V+ H ++ Sbjct: 120 EDGGVTILSKWPILEKIQYVYADGCGADWFSNKGFVYARLDVNGAPLHVVGTHAQAADTG 179 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KESLVPFVIAGDFN 212 C + + Q L+ ++ + + +I GD N Sbjct: 180 CADGTGAGVRAA-------QFDELRAFLDARLIPTGEQVIITGDLN 218 >gi|19704226|ref|NP_603788.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328862|ref|ZP_06871373.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714452|gb|AAL95087.1| DNAse I homologous protein DHP2 precursor [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153983|gb|EFG94790.1| DNAse I family protein DHP2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 279 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 102/311 (32%), Gaps = 57/311 (18%) Query: 3 RKYVLALVFFLVPCTA--SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 RK +L +F L C + S A + + S+NI L D + Sbjct: 4 RKLLLLTIFALFFCLSILSSADEAYIASFNILRLGA-------------AKKDMPQTAKI 50 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPK------NTWCIFYSTERLINHSKRDSNNDIHTAI 114 + DIV L E+ + + V ++ + W S + + ++ ++ Sbjct: 51 LQGF--DIVGLVEVINRDGVEELVDELNKASDEKWDYHISPFGVGSSKYKEYFAYVYK-- 106 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K + + + + + R +I + +H + ++ Sbjct: 107 --KDKVKFIKSEGF-----YKNGKSSLLREPYGATFQIENFDFTFVLVH---TIYGNNES 156 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID---- 229 + + ++ + D+ + + IAGDFN + L + +K D Sbjct: 157 QRKAENFKMVD-----VYDYFQDRDKKENDIFIAGDFN--LYALDESFKPLYKHSDKITY 209 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 D I+ R N D F Q + S + ++ D+ K Sbjct: 210 AIDPAIKTTIGTKGRAN---------SYDNFFFSQKYSQEFTGSSG-ALDFSGDNPKQMR 259 Query: 290 KRLSDHCPISI 300 + +SDH P+ I Sbjct: 260 EIISDHIPVFI 270 >gi|21224501|ref|NP_630280.1| hypothetical protein SCO6176 [Streptomyces coelicolor A3(2)] gi|4008541|emb|CAA22510.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 276 Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 87/309 (28%), Gaps = 67/309 (21%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + +R+ ++NI+ + +GV D + LDAD++ LQ Sbjct: 10 ALAADRGHSVPLRIATYNIHAGAGSDGVF-----------DLDRQAAALRALDADVIGLQ 58 Query: 73 EMG------------SYNAVAKVFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKK 119 E+ + ++ + ++ YS + + +R+ + + VR Sbjct: 59 EVDVHWGARSQGLDVAGELARRLGMRVSFAPIYSLDPVTAGEPRREYGVAVLSRFPVR-- 116 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAV-ELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 L +D E+ +++ G + V HL + Sbjct: 117 --SATNHEITRLSTQDENPLPAPAPGFGEVTLKVRGVPVQVFVTHL---------DYRAD 165 Query: 179 PSCSLLSQQAQWLKDWITQKKES---LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 P+ Q + I ++ + + GDFN + WK + + Sbjct: 166 PAVR--RAQVADTRR-IMARERAELPGAHQFLLGDFNAEPAAPELA-PLWKELSDAGAGT 221 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY ++ SDH Sbjct: 222 PATYPAQAPVK---------RIDYVTAGKDVRIRRTA-------------VPEEPAASDH 259 Query: 296 CPISIDYDF 304 P+ D Sbjct: 260 RPVVADVSL 268 >gi|242215539|ref|XP_002473584.1| predicted protein [Postia placenta Mad-698-R] gi|220727304|gb|EED81227.1| predicted protein [Postia placenta Mad-698-R] Length = 475 Score = 42.4 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 83/291 (28%), Gaps = 70/291 (24%) Query: 64 LDADIVFLQEMGSYNA-VAK--VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 L ADI+ QEM S A + + P F +S D A +R + Sbjct: 14 LGADIICFQEMKSSRATLPRDVALPGPYHGFFSFPVNKGGYSGVAVYADSRKATPLRAEE 73 Query: 121 VRV--------------LQQSYPLLGAKDSFS--RAGNRRAVEL------LVEINGKKIW 158 + SYPL D F + + ++ Sbjct: 74 GLTGVLQPKPPMSPEERVSMSYPLAHDFDPFPDDNGETDSGFDALDSEGRTLVVDFGLFV 133 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKI 215 +++++ + L + L Q + ++ ++ GD N + Sbjct: 134 LINVYCPAETSDARLPFKMN---FHLLLQERIR----KLIEKEHREVIVVGDINIAATPL 186 Query: 216 NYL--------------GNNDDFWKTIDPNDSLI------RFPKEKDSRCNANKNL---- 251 ++ + F +DPN ++ ++ C K Sbjct: 187 DHAEGNLPSSIATFWDHPAREWFRNWLDPNGPMVDVIRMFWPERKGLYTCWNMKLQARET 246 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IDY ++ + ++ L + SDHCPI ID Sbjct: 247 NYGARIDYVLVTKGLLPWIKHGDIQASL-----------KGSDHCPIYIDL 286 >gi|126733500|ref|ZP_01749247.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] gi|126716366|gb|EBA13230.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] Length = 306 Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 45/304 (14%) Query: 14 VPCTASVAQKVRLVSWNINTL---SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF 70 VP +R+ ++N++ + E S+ ++T + +DAD++ Sbjct: 31 VPLPEPDDNTLRVATYNVHYIILGRETGAWSVGDWERRKTPFNLA-----FNAVDADVIG 85 Query: 71 LQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-- 126 QEM S + ++ W + + + + I R + +L Sbjct: 86 FQEMESFGRGSGGRINLTLDWLLENNPDYAAAAVGDPAAFPSTQPILYRSDRLTLLDDGW 145 Query: 127 ----SYPLLGAKDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPS 180 P + +F+ + N G+ V+++H D + Sbjct: 146 FFFSDTPDVIYSRTFNGSFPAFTSWAQFRDNTSGEIFRVINLH------TDYASRSNRI- 198 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + A + W+ + GDFN +I D + + Sbjct: 199 -QSIELVADRIAPWM----ADNETLFVIGDFNGRI-----GDTVVNILADKGLNFAPVQG 248 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 S + N+ + ID+ NA K G+ +DH P+ Sbjct: 249 --STFHFNRGINLFGAIDHIASTGNAQLIGQPIVLRR--------KFAGEWPTDHYPVIA 298 Query: 301 DYDF 304 DY Sbjct: 299 DYRL 302 >gi|332239853|ref|XP_003269109.1| PREDICTED: deoxyribonuclease-1-like 2-like [Nomascus leucogenys] Length = 228 Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ D + ++ + Sbjct: 117 LDVIDKW------GTDDMLFLGDFNADCSYVRAQDWAAIRLRSSEVFKWLIPDSADTTVG 170 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V + L +S + + E+ + + L SDH P+ + Sbjct: 171 NSDCAY----DRIVACGARLRRSLKPQSATVHNFQEEFGLDQTQALAISDHFPVEVTL 224 >gi|301782323|ref|XP_002926565.1| PREDICTED: deoxyribonuclease-1-like 2-like [Ailuropoda melanoleuca] Length = 278 Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN NY+ D + ++ + Sbjct: 168 LDVIDKW------GTDDLLFLGDFNADCNYVREGDWPSVRLRSSEVFKWLIPDSADTTVG 221 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V + L +S + + E+ + + L SDH P+ + Sbjct: 222 NSDCAY----DRIVACGARLRRRLKPQSAAVHDFQEEFGLDQAQALAISDHFPVEVTL 275 >gi|110834792|ref|YP_693651.1| hypothetical protein ABO_1931 [Alcanivorax borkumensis SK2] gi|110647903|emb|CAL17379.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 315 Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 72/242 (29%), Gaps = 35/242 (14%) Query: 66 ADIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-- 120 ++ QE+ + + ++ + + S D A+ R Sbjct: 83 PHVLAFQEVENQIVLNRLAERLALLGYRYRSVLREGNDPSGMD------VAVMYRSPVNI 136 Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 S L +SR V++ + ++ +H +S L + Sbjct: 137 GSVGTLFSDQRLRGHALYSRPPL--VVDIEAPL---AARLVVVHWRSAKNLKKAQVYEKR 191 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 QA L +W+ ++ P ++AGDFN F + + Sbjct: 192 -----QTQAALLANWVAAQRS---PLIVAGDFNTTWGQG----RFSASYRRFEQAGLLNT 239 Query: 240 EKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFS---EILYNEDDIKSRGKRLS 293 + + + R + +D+ + F+ Q + S Y+ +S Sbjct: 240 WAELPKKSRYSFRYRCQPQALDHIWVSPILKAFVNQVAVSRGHAGRYDSLYRSKGVSPVS 299 Query: 294 DH 295 DH Sbjct: 300 DH 301 >gi|182420508|ref|ZP_02643101.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] gi|182380424|gb|EDT77903.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] Length = 262 Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 12/109 (11%) Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKI 255 + P++I GDFN + D+ + I N++ + K Sbjct: 162 EIYKTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKG 216 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D ++D L + + N DD K G SDH P+ + + Sbjct: 217 GYDGRIID----YILYSKEYEIKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|162448958|ref|YP_001611325.1| endonuclease/exonuclease/phosphatase family protein [Sorangium cellulosum 'So ce 56'] gi|161159540|emb|CAN90845.1| endonuclease/exonuclease/phosphatase family [Sorangium cellulosum 'So ce 56'] Length = 1174 Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 64/244 (26%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-AKNL-DADIVFLQEMGS- 76 A + + ++N+ L G K + L + +NL D+V L+E+ Sbjct: 650 TADDLDVAAFNVENL--DPGDPQEK---------FDRLARILVENLGSPDLVALEEVQDN 698 Query: 77 ------------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR- 117 A+A V + F S + + +I R Sbjct: 699 SGPTNNGVVDASTTFARLIAAIAAVPGGPSTYQFRSIDPTDGTDGGEPGGNIRVGFLFRT 758 Query: 118 -KKNVRVLQQSYPLLGAKDSFSRAG--------------------NRRAVELLVEINGKK 156 + V + L + AG +R+ + NG+ Sbjct: 759 DRGLEFVDRPGAGALTPNEVLGGAGGVSLRYSPGRIDPGNPAFASSRKPLAGEFRWNGQP 818 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLL------SQQAQWLKDWITQKKESLVP--FVIA 208 ++V+ H S + L + P L QQA + ++ Q +S V+ Sbjct: 819 LFVVANHWNSKGGDEPLYGRFQP--PTLSSEVQRRQQATVVAGFVRQILDSDPAANVVVL 876 Query: 209 GDFN 212 GD N Sbjct: 877 GDLN 880 >gi|294778476|ref|ZP_06743899.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|294447738|gb|EFG16315.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] Length = 336 Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 112/355 (31%), Gaps = 75/355 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL------SEQEGVSLWKNSVK-----RT 50 ++K +L L + + R++ +N+ L + + ++ K R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINH 101 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLAKIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSP---- 116 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160 I A+ ++ + ++L ++ + K+ R R + ++ ++ +G + V Sbjct: 117 ----DERGIDVALLYQRGSFKLLGKNSLSVPYKEM-ERRPTRDILHVMGQVASGDTLDVF 171 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H+ ++ S + +L+ A + + ++ V +I GDFN +Y Sbjct: 172 VCHMPSRAGGEEKSEPYRLFTA-QILNIAADSI---MNLRQHPNV--MIMGDFN---DYP 222 Query: 219 GNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKIPI-DYFVMDQNAYKFLIQ 272 NN K + + D R R + I D ++ L Sbjct: 223 TNNS-IAKVLGAVAPKGEVQAKKLYNLMDGRKEGTYRYRGEWGILDQLIVSG---FLLQG 278 Query: 273 ESFSEILYNEDDIKSRGKRL------------------------SDHCPISIDYD 303 Y++ I L SDH P+ +D++ Sbjct: 279 HDGICTSYDKAQILRHPFLLEEDEKYGGDIPSRTYWGKKYHGGYSDHLPVCVDFE 333 >gi|237797954|ref|ZP_04586415.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020805|gb|EGI00862.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 291 Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----------Y 77 SW L G + + +D+ D+V LQE+ Sbjct: 58 SW--QHLLPHGGRAGNLQKIGELINDF------------DLVALQEVDGGSMRSGFVNQV 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN + R + ++ P Sbjct: 104 EHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLSRLRPAKIEDHPLPGPAG---- 152 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL ++Q +I + Sbjct: 153 -----RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQL----AYIRE 190 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N N L + L + ++ + R + + Sbjct: 191 LIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEATF---PSWRPQRCL 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 241 DHILLSP--------------TLTLERVQVLAQPISDHLPVAVEIRL 273 >gi|254372791|ref|ZP_04988280.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida GA99-3549] gi|151570518|gb|EDN36172.1| exodeoxyribonuclease III [Francisella novicida GA99-3549] Length = 262 Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 85/276 (30%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 24 FKTQDVDFLCMQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 72 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 122 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 123 YKM---QFLEKYKEIL----KEQAESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES D R SDH P++I YDF Sbjct: 234 KVVPES---------DYIYRENWFSDHAPLTISYDF 260 >gi|294632194|ref|ZP_06710754.1| exodeoxyribonuclease III [Streptomyces sp. e14] gi|292835527|gb|EFF93876.1| exodeoxyribonuclease III [Streptomyces sp. e14] Length = 261 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 84/300 (28%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ LQE AKV Sbjct: 3 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCLQE-------AKV 39 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 R + + +AV + L G R Sbjct: 40 ---AEDQFPAEQLRELGYESAVHATGRWNGVAVLSRVGLADVVKG-LPGDPGYDGVQEPR 95 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 V + V +++ + +D Y + + LK + Sbjct: 96 A-----VSATCGPVRVWSVYVPNGREVDHPHYAYK------LEWFEALKAAVAGDAAGSR 144 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------NANKNL 251 PF + GD+N +DD + + P E+ + K Sbjct: 145 PFAVLGDYN----VAPTDDDVYDRAAFEGATHVTPAERAALASLREAGLADVVPRPLKYE 200 Query: 252 RNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 DY + I + + + + R SDH P+ +D D Sbjct: 201 HPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDAYVDREERKGKGASDHAPVVVDLD 260 >gi|320591837|gb|EFX04276.1| inositol polyphosphate phosphatase [Grosmannia clavigera kw1407] Length = 1314 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 102/341 (29%), Gaps = 72/341 (21%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV--FLQEM---GSYNAV 80 +++WN + + R D + DI+ QE+ A Sbjct: 881 VMTWNAG--ASTPSTLRYAEDDARFMQDLLQ-----SSESPDILVFGFQELVDLEDKTAT 933 Query: 81 AKVF-------PKNTWCIFYSTERLINHSKRDSNN----------------DIHTAIAVR 117 AK F + + + + R ++ + T + V+ Sbjct: 934 AKRFLKPKKKEGADQERMSHQYRDWRDFLVRSLDDYVAGELYHLLQTAHMVGLFTCVFVK 993 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 ++ + GN+ A+ + ++ + +++ HL + + + Sbjct: 994 ADLRGRIRGVASTEVKRGMGGLHGNKGAIAVRFLVDDTSLCLVNCHLAAG--QSQAAHRH 1051 Query: 178 SPSCSLLSQQAQWLKDWITQKKES----LVPFVIA--------GDFNRKINYLGNNDDFW 225 + ++L ++ ++ + + ++ +I GD N +I+ + + D Sbjct: 1052 NDIAAILESESLPVERDLAARIDNFVGGGDGSMILDHELCVLNGDLNYRIDTM-SRDTVV 1110 Query: 226 KTIDPNDSLIRFPKEK-------DSRCNAN----------KNLRNKIPIDYFVMDQNAYK 268 + + +++ ++ + + D + + Sbjct: 1111 AAVRAGNLTKLLERDQLLVARRRNAAFRLRAFEELPITFAPTYKYDVGTDTYDTSEKKRS 1170 Query: 269 -----FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L+ + D + R+SDH P++ + F Sbjct: 1171 PAWCDRLLFRGGRASRVRQLDYRRHEVRVSDHRPVTGQFAF 1211 >gi|260797709|ref|XP_002593844.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] gi|229279074|gb|EEN49855.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] Length = 403 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 40/197 (20%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 + V L++WNIN L ++ N ++RT + + +L D+VFLQE+ Sbjct: 118 SEPVTPGFTLLTWNINGLDQR-------NILERTKA----VCNTINSLYPDVVFLQEV-- 164 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKD 135 P Y + + S + + TA+ +RK ++ + Q+ Sbjct: 165 -------IP---QTFEYIEAKCDRYKAIASGTEQYFTAMLLRKSSITFISQNIQPFPTTR 214 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + + ++ HL+S D +Q Q + + Sbjct: 215 M-----MRNLLIVKARFGSVPLCLMTSHLES--TKDHAAER--------KRQLQQVLQTV 259 Query: 196 TQKKESLVPFVIAGDFN 212 Q+ ++ ++ GD N Sbjct: 260 MQQDQTN-TVIVGGDLN 275 >gi|302852561|ref|XP_002957800.1| hypothetical protein VOLCADRAFT_98932 [Volvox carteri f. nagariensis] gi|300256871|gb|EFJ41128.1| hypothetical protein VOLCADRAFT_98932 [Volvox carteri f. nagariensis] Length = 652 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 7/72 (9%) Query: 25 RLVSWNI--NTLSEQEGVSLWKNSVKRTTSD----YTLLRQYAKNLDADIVFLQEMGSYN 78 R +SWNI + L++ L+ + T D + + + D++ LQE+ + Sbjct: 74 RFMSWNILADELAQSHAAELYPQAHH-TCLDWSRRLAAVVSHVETHRPDVLCLQEVDDWP 132 Query: 79 AVAKVFPKNTWC 90 + + + Sbjct: 133 RLRQALGAVGYD 144 >gi|255535973|ref|YP_003096344.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium 3519-10] gi|255342169|gb|ACU08282.1| hypothetical protein FIC_01839 [Flavobacteriaceae bacterium 3519-10] Length = 314 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 101/324 (31%), Gaps = 67/324 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVK----RTTSD------YTLLRQYAKNLDAD-------I 68 + +N+ L + + K R + + + L AD + Sbjct: 10 IAFYNVENLLMPDPPPVHKTDPSASGLRNWDERKYRIKLSKIAHVF-QLIADQEGVTPLL 68 Query: 69 VFLQEMGSYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 + L E+ + ++ P I H I A+ + ++++ Sbjct: 69 IGLCEVQGREPLEELLALTPFPNHQIV--------HYGSSDLRGIDVALLYDRTKLQLIS 120 Query: 126 QSYPLLGAKDSFSRAGNRRAVELL---VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + + ++L +G+ + V +HL S E + + Sbjct: 121 SQPLSFNFQTTDGESQPDPTRDILHCRFHCDGRNLNVFVLHLPS-----KREKDVNKALR 175 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE-- 240 + L +T+ + +I GDFN ++D K + + ++ Sbjct: 176 T--NILEQLHQVVTEYIANGEAVIICGDFNAN-----PDEDTVKKLLYDKDFMKVLHNPF 228 Query: 241 ---KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE-ILYNEDDIKSRGKRL---- 292 + + + N + D ++ Y+ F +++ + ++ R ++L Sbjct: 229 GELLSANKFSTYHRANGLLFDQIILSDGFYRTGFPLKFKTAKIFSYEKLRVRDRKLAARP 288 Query: 293 -------------SDHCPISIDYD 303 SDH P+ +++ Sbjct: 289 AKTFAGTRYLGGYSDHFPVITEFE 312 >gi|93005871|ref|YP_580308.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] gi|92393549|gb|ABE74824.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] Length = 341 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 76/221 (34%), Gaps = 36/221 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYT-LLRQY---AKNLDADIVFLQEMGSYNAVA 81 + + N+ + + N+ T +Y LR ADI+ +QE+ A+ Sbjct: 14 IATANLLNFA-NPNRLYYPNAPAYTNHEYEHKLRGITYLLSKAHADIIAVQEVWDSEALE 72 Query: 82 KV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR--------VLQQSY 128 + F I ++ +N + + A+ + + ++ ++ Sbjct: 73 ALAVSLGFKPEHVVIPLASNDSVNSYTQGNGAQNTPAVGIISRFAHLETSLLEEIVPKAV 132 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS----------FCFLDSLEN--- 175 + + R R + L V+ G+ I ++ HLKS L+ +++ Sbjct: 133 IDIPDVGPYQRFN-RPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNI 191 Query: 176 ----TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 C ++ A I + + + P ++ GD N Sbjct: 192 RIRAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMN 232 >gi|312198907|ref|YP_004018968.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] gi|311230243|gb|ADP83098.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] Length = 305 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 90/311 (28%), Gaps = 83/311 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WNIN ++ R L ++ D+V LQE A A+ Sbjct: 1 MRIATWNIN------------SAKARQ----ARLIEWLDRAQPDVVCLQETKLDDEAFAE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F ++ + R ++ A+ R V + G + RA Sbjct: 45 NFDEDLF------RRGYRYAHHGDGRWNGVALLSRAGLDDVARGFAGDPGFPEPEPRA-- 96 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK--E 200 + G ++W L + N +P + + +WL Sbjct: 97 -----IAATCGGIRVWSLYV-----------PNGRTPDDPHYAYKLRWLAALRDTVAEVA 140 Query: 201 SLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDS---------------- 243 + P + GDFN + D D W D + E+ + Sbjct: 141 AHQPVMALGDFN-----IAPTDADVWDPADFVGATHVTEPERAALRELTGVGLIDVLRAR 195 Query: 244 --RCNANKNLRNKIP---------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 + ID + + K + +Y D +G Sbjct: 196 WPDETVYTYWDYRALCFPKNMGMRIDLTLAGADVAKRVAA------VY-VDRAARKGTGT 248 Query: 293 SDHCPISIDYD 303 SDH P+ +D D Sbjct: 249 SDHAPVIVDLD 259 >gi|2462635|emb|CAA04665.1| deoxyribonuclease I [Oreochromis mossambicus] Length = 284 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+ GDFN +Y+ + I + + + + P D V+ + Sbjct: 189 VLLGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAAD----TTVSQTVCPYDRIVVTTD 244 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + ++Q S Y D + L SDH P+ + Sbjct: 245 MMRGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284 >gi|6647483|sp|O42446|DNAS1_OREMO RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor Length = 284 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 6/100 (6%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+ GDFN +Y+ + I + + + + P D V+ + Sbjct: 189 VLLGDFNAGCSYVSGSAWQQIRIFTDKTFHWLITDAAD----TTVSQTVCPYDRIVVTTD 244 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + ++Q S Y D + L SDH P+ + Sbjct: 245 MMRGVVQNSAKVYNYMTDLNLKQDLALAVSDHFPVEVKLS 284 >gi|107027090|ref|YP_624601.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116691517|ref|YP_837050.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105896464|gb|ABF79628.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116649517|gb|ABK10157.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 604 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 108/320 (33%), Gaps = 52/320 (16%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEM- 74 +R+ S+N +N + + + R + ++ + DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 75 ----GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 G +AV ++ N W + + + R + I A+A+ + +V Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRV------VDPGTSRLGGDAI--AVAMIYDSRKVEPVGR 404 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSC--S 182 A D +R ++ L V N + + V HLKS D+ + C Sbjct: 405 AATLAIDDKNRQPLAQSFRL-VNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNP 463 Query: 183 LLSQQAQWLKDWI--TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPND 232 ++ A + DW+ ++ GDFN R + G + + I N Sbjct: 464 TRTRAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPIRTLESRGYRNLVARWIGANA 523 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQN---AYKFLIQESFSEILYNEDD 284 + E +A L + + D+ Y + + + + D Sbjct: 524 YSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYAAD 583 Query: 285 IKSRGKRLSDHCPISIDYDF 304 R SDH P+ ID Sbjct: 584 ----AYRSSDHDPVLIDIAL 599 >gi|270295490|ref|ZP_06201691.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274737|gb|EFA20598.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 254 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 81/267 (30%), Gaps = 46/267 (17%) Query: 49 RTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKR-- 104 R ++ Y D++ +QE+ + + P + + Sbjct: 20 RKGDACRMIAYY----SPDLLGMQEVLHNQMEDLKRGLP--QYTALGVGRDDGKEAGEYC 73 Query: 105 --DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVL 160 D T V N + +Q P + + NR +++ NG+K Sbjct: 74 PIFFRTDRFT--LVEYGNFSLSEQ--PETIGIKGWDASYNRVTTWAILQEKNNGQKFVYF 129 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 + HL D+ T L L I + +P +I GDFN Sbjct: 130 NTHL------DNDGKTARKEGVQL-----ILDK-IKE-IAPGMPAIITGDFN-----CTP 171 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL----IQESFS 276 ++ +T++ E ++ A + D+ + L + + Sbjct: 172 GEEPLQTLEKGG------MENAAKTAAVTYGPSWSFHDFGRLPVEERVLLDYVFVTKGAK 225 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYD 303 Y K LSDHCPI ++ Sbjct: 226 IDRYRVIQDKPENSYLSDHCPILVELT 252 >gi|317496367|ref|ZP_07954721.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316913503|gb|EFV34995.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 354 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 57/287 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMG----------SYNAVAKVFPKNT-----WCIFYST 95 ++ T + + K AD+ FLQE+ + + K ++ + + Y Sbjct: 91 ENNLTNITRIIKEEAADVTFLQEVDVDSKRTYNINQVDYLDKALDNSSIFAYNFRVAYIP 150 Query: 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK 155 L K +S T + + + + R + + +E + K Sbjct: 151 YPLPPLGKVNSGIYTSTKFNIENAERYQMPIPFTFPTRLANLKRGFS--VIYSNIENSDK 208 Query: 156 KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 K+ +++ HL + +N + Q + L +++ ++ ++ DFN+++ Sbjct: 209 KLVLINAHLDA----YDKDNKGKIA------QTKQLIEFMEKEYAKGNYVLVGADFNQEL 258 Query: 216 NYLGNND-----------DFWKTIDPNDSLIRFPKEKDSRCNANKNLR-------NKIPI 257 L + + + D + N + I Sbjct: 259 RDLTKEEIEKTPAELWRAELFDKTLLKDKFKLYYDNSRPSARLNNKPYEKGSNGTYEFII 318 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D F+ N S++ + D R SDH P+ + + Sbjct: 319 DGFIASDNI-------EVSQVKTLDQD-----YRYSDHNPVKLRFRL 353 >gi|291298431|ref|YP_003509709.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567651|gb|ADD40616.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 278 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 83/272 (30%), Gaps = 44/272 (16%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW-------CIF 92 ++ + D + + + L+ D++ LQE+ + + + W + Sbjct: 44 FNIHHGASPDDVMDLERIARRIEALNCDVIGLQEVDRFWKRSGFVDEPAWLAERLGLEVA 103 Query: 93 YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI 152 + + + + AV + ++ L + D R R +++ Sbjct: 104 FGANLDLAPEEPGRPRRQY-GTAVLSRWPIAESENTLLPKSGDDEQRGLLR----TVLDA 158 Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 G + HL+ + + + QA+ + I ++ V+ GDFN Sbjct: 159 PGGAFVFANTHLQHG-----TDESVRVA------QAELI---IEILGDAPQRTVLVGDFN 204 Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + D + + D + N + ID+ + + Sbjct: 205 AEPG-AESIDVIANRLP---DAWAAAGDGDGLTYPSDNPHAR--IDFVFAAPDVKPAAMA 258 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+S + F Sbjct: 259 ------------VDAEDPSASDHLPLSGTFAF 278 >gi|254487256|ref|ZP_05100461.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] gi|214044125|gb|EEB84763.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] Length = 260 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 75/279 (26%), Gaps = 55/279 (19%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAV--AKVFPKNTWCIFYSTERLINHSKRDSNN 108 + L Q+ D+ LQE+ + + ++F + + Sbjct: 12 KARIDALPQWLDEAQPDVAILQEIKTVDDAFPRELFEDRGYNV------------ETHGQ 59 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 +A+ + G R +E V + I + ++L + Sbjct: 60 KSFNGVAI----LSKRPLEDVTRGLPGDDGDEQARY-IEATVMGDKSAIRLCGLYLPNGN 114 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RK 214 + Y + L+D PF++ GD+N R Sbjct: 115 PAPGPKFDYK------LEWMARLEDRARALLAEETPFLMTGDYNVIPQAEDAATPDAWRD 168 Query: 215 IN-YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN--------ANKNLRNKIPIDYFVMDQN 265 + W+ + F + N N I ID+F++ Sbjct: 169 DALFRPETRAAWRKLVALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPV 228 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L D + SDH P+ +D DF Sbjct: 229 VADMLRDCQI-------DKEIRGRDKPSDHVPVWVDLDF 260 >gi|158522531|ref|YP_001530401.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158511357|gb|ABW68324.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 232 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 36/194 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWK-NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L ++NI V RT + LDADI+ LQE+ + + + Sbjct: 7 LKLATYNI-----HGSVGTDGRFDPARTMA-------VINQLDADIIALQEVSTIRSDLR 54 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 W S + + + A V + SF + Sbjct: 55 -----EWV---SGFQAETGMRVIPGMTMFRDAAHYGNVVLTRDAVEHVEHINLSFKQREP 106 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+ L + ++ ++I ++ HL L + Q + L + ++ Sbjct: 107 RGAICLTLSVDDRRICIVATHL-------GLRAAERRA------QVKLLLKVLERRPA-- 151 Query: 203 VPFVIAGDFNRKIN 216 FV+ GD N I Sbjct: 152 DIFVLMGDLNEWIA 165 >gi|119471476|ref|ZP_01613917.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7] gi|119445575|gb|EAW26860.1| hypothetical protein ATW7_16665 [Alteromonadales bacterium TW-7] Length = 910 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 99/334 (29%), Gaps = 77/334 (23%) Query: 24 VRLVSWNINTLSE-QEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEMG 75 +R+ S+N+ L+ R L + L AD+V L E+ Sbjct: 462 LRVASFNV--LNYFNGDGQGAGFPTSRGADSLEELVRQEAKLVSAISAMQADVVGLMEIE 519 Query: 76 SYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDI------HTAIAVR-KKNVRV 123 + A+A + + ++ D N + TA+ R K V Sbjct: 520 NDGFGEFSAIASLVNA-----LNDADSANEYAFVDFNVNQVGTDAITTALIYRANKVEEV 574 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI-HLKS--FCFLDSLENTYSPS 180 + D +R ++ + + ++++ + + HLKS C S N Sbjct: 575 GSAAITTAAPFDFSNRTPIAQSFK---SLESQEVFTVAVAHLKSKGGCGSASGANEDQND 631 Query: 181 CSLLSQQAQ-----WLKDWITQKKES--LVPFVIAGDFN--------RKINYLGNNDDFW 225 + + DW+ K ++ GD N RK + G + Sbjct: 632 GQACWNEIRTEGASAFADWLDSKPTGVDDEDIILVGDMNAYAMEDPIRKFDEKGYKNVV- 690 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 +D N + + +D+ V ++ ++ I +E + Sbjct: 691 AELDGNTLAYSYSFSGRAG-----------SLDHAVATESLLSKVVAAKDWHINADEPIV 739 Query: 286 KSR-----------------GKRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 740 LDYNVEFKSEGHQSTLYSESAYRASDHDPVIVDI 773 >gi|312882308|ref|ZP_07742052.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370021|gb|EFP97529.1| hypothetical protein VIBC2010_09642 [Vibrio caribbenthicus ATCC BAA-2122] Length = 456 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 99/311 (31%), Gaps = 56/311 (18%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 VP + + + ++N+ + + + + S L Y D++ LQE Sbjct: 176 VPMPEERSNAISVGTYNL-WMIPAVSSDITERANLMEHS----LSGY------DVLALQE 224 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRKKNVRVLQQSYPL 130 F + +F S R + D ++ V +L+ + Sbjct: 225 ---------AFASDRDALFDSLSREYPYKTDVVGGDSMAMYDGGVVTLSRYPILETDAII 275 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS----LLSQ 186 ++ V ++ NG+ + + HL SF ++ +L++ Sbjct: 276 FNHCSGTDCHADKGIVYTKIDKNGQIYNIFNTHLASFSTPEAKRLRRLQLGLLRTFMLTK 335 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKEKD 242 Q S + AGDFN + N DF + + +L + ++ Sbjct: 336 QIP-----------SNEVVIFAGDFN-----IDKNSDFLEYLLMLATLEVDPPAYDGHRE 379 Query: 243 SRCNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + N + +DY ++ + + ++ LS Sbjct: 380 ATFDPTINRYARANYSGGETVEYLDYVLVSSEHLRARKNINTVQLKQRVSYATWDDWHLS 439 Query: 294 DHCPISIDYDF 304 DH ++ +++F Sbjct: 440 DHFAVNGEFEF 450 >gi|289641553|ref|ZP_06473715.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] gi|289508648|gb|EFD29585.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] Length = 425 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 96/326 (29%), Gaps = 105/326 (32%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYN 78 + VR+ +WNIN ++ R L ++ D+V LQE S Sbjct: 78 TSDGVRVATWNIN------------SAKARQ----ARLIEWLDRAQPDVVCLQETKLSDA 121 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQ--QSYPLLGAK 134 A ++F ++ + + + +A+ R V P A Sbjct: 122 AFLELFDEDLFR--------RGYRVAHHGDGRWNGVAIFSRAGLDDVEAGLADGPGFPAP 173 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + A I + +++ + +D Y + W Sbjct: 174 EPRALAATCGG-----------IRIWSLYVPNGRAVDDPHYAYKLT-------------W 209 Query: 195 ITQKKESLV------PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 + + S+ P + GDFN I P D+ + P + Sbjct: 210 LAALRASVEKALTTAPVIACGDFN---------------IAPTDADVWDPAAFAGATHVT 254 Query: 249 KNLRN--KIPIDYFVMDQNAYKFLIQESF-----SEILYNED-----DIKSRGKRL---- 292 R + D ++D ++ ++ F +++ ++ D+ L Sbjct: 255 DAERRALRELTDLGLVDVMRRRWPDEQVFTYWDYRALMFPKNMGMRIDLLLASDSLVDRV 314 Query: 293 ---------------SDHCPISIDYD 303 SDH P+ +D D Sbjct: 315 RAVWVDRQARKGTGTSDHAPVIVDLD 340 >gi|302532763|ref|ZP_07285105.1| polynucleotide adenyltransferase [Streptomyces sp. C] gi|302441658|gb|EFL13474.1| polynucleotide adenyltransferase [Streptomyces sp. C] Length = 283 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 54/200 (27%), Gaps = 42/200 (21%) Query: 19 SVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 A VRL++WN +D DAD++ LQE+ Sbjct: 113 PAAHPPASVRLLTWNTLWDRYDAPRIATARRRPMLLADLA-------VADADVIALQEVE 165 Query: 76 SYNAVAKVFPK---NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + + + + V + VL P+ Sbjct: 166 PALLALLLAEPWVRDGYTLGTDPR----------------GTDVADNGLLVLS-RLPVRE 208 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A R ++ + V+ G + V HL S D L++ A+ L Sbjct: 209 AGMHELR-PHKAVTAVTVDTAGGPLVVAATHLTSDHTEDGAARRERE----LARLAEGLA 263 Query: 193 DWITQKKESLVPFVIAGDFN 212 + GDFN Sbjct: 264 G-------IGAGVALLGDFN 276 >gi|86130871|ref|ZP_01049470.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] gi|85818282|gb|EAQ39442.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] Length = 254 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 81/266 (30%), Gaps = 41/266 (15%) Query: 55 TLLRQYAK----NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 LR+ D D+V LQE + + + E H + Sbjct: 13 AALRKDFALWLKQTDPDVVLLQETKA--------TPDQVDVAVFEELGYEHYWFSAQKKG 64 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 ++ +AV K + + + D R + ++ + V+ ++L S Sbjct: 65 YSGVAVLTKKTPKHIEYGTGIASMDFEGRN---------IRVDFDDVSVMSMYLPSGTNS 115 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW-KTID 229 LE+ L+D++ + K+ VI GD+N + +D K + Sbjct: 116 ARLEHKLEY--------MDLLQDYVNELKQDKPNLVIGGDYNICHEAIDIHDPVRNKKVS 167 Query: 230 PNDSL--IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 + +S + NK P +Y A + + + Sbjct: 168 GFLPVEREWIGNFMESGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLK 227 Query: 288 ---------RGKRLSDHCPISIDYDF 304 + SDHCP ++ D Sbjct: 228 DKISRAIILSDAKHSDHCPHMVELDL 253 >gi|99078734|ref|YP_611992.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] gi|99035872|gb|ABF62730.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] Length = 341 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 15/113 (13%) Query: 5 YVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL 64 + L + + +R+ ++N LS + L ++ ++R + Sbjct: 10 LLCHLFWTSASDAGPQSGTLRVATFNTE-LSRKGPGLLLRD-LRRGDDQIRAVVGTIVEA 67 Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 ADI+ LQ + W + R + H + + D A AVR Sbjct: 68 GADILALQGVD-------------WDYDLYSLRALQHRLKGAGQDYPYAFAVR 107 >gi|223933529|ref|ZP_03625511.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] gi|223897789|gb|EEF64168.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] Length = 651 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 92/326 (28%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + DI+ L E+ Sbjct: 236 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDIIGLIEVQDNN 289 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 290 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 348 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 349 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 408 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFNRKINY 217 L S + L P ++ L I ++ + V+ GDFN Sbjct: 409 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQIIADFTKAGLAQNPNANIVMLGDFNDYEFT 468 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N L+ + Sbjct: 469 KTI-----EILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTN----LLDRYAFD 519 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 520 MVHVNSAFMEEHGRASDHDPLLVQLD 545 >gi|152986913|ref|YP_001348510.1| hypothetical protein PSPA7_3150 [Pseudomonas aeruginosa PA7] gi|150962071|gb|ABR84096.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 245 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 82/251 (32%), Gaps = 43/251 (17%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAK-VFPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR+ +++ AD+VFLQE+ S +A +P + + + + + Sbjct: 29 LREAVRSVGADLVFLQEVLGSHSLHAARLPAWPPAPQYEYLADSMWPQFAYGRNAVYPEG 88 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H A+ K+ + ++ + + R +++ G+ + + +HL Sbjct: 89 HHGNALLSKHPILDHRNL-DVSVAGNEERGLLHAVIDI-----GRPLHAVCVHL--GLRE 140 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + C L+ P V+AGDFN ++ D Sbjct: 141 AQRQRQLQLLCELV------------TGLPEREPVVVAGDFN---DWRQRADRLLAGCG- 184 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + ++ + P+ +D+ + + + Sbjct: 185 -----LREVFVGAEGRPARSFPARWPL--LPLDRIYLRNARGRQPRILS------RRPWS 231 Query: 291 RLSDHCPISID 301 LSDH P++++ Sbjct: 232 HLSDHLPLAVE 242 >gi|302186191|ref|ZP_07262864.1| exonuclease III [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 55/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEDS 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESQFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|182701737|ref|ZP_02615102.2| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] gi|182668752|gb|EDT80730.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] Length = 360 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 99/304 (32%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 84 DGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 141 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 142 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 198 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E NG+++ +++ HL + Y + QQ +LK++I Sbjct: 199 AELDRCFLESRISLE-NGRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 247 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 248 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 307 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N + + + +DH P+++ Sbjct: 308 RTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFKN----------TDHNPVNM 355 Query: 301 DYDF 304 ++ Sbjct: 356 EFKL 359 >gi|168184533|ref|ZP_02619197.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] gi|182672340|gb|EDT84301.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] Length = 352 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 99/304 (32%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E NG+++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRISLE-NGRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N + + + +DH P+++ Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFKN----------TDHNPVNM 347 Query: 301 DYDF 304 ++ Sbjct: 348 EFKL 351 >gi|312864007|ref|ZP_07724243.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] gi|311100420|gb|EFQ58627.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] Length = 271 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 60/281 (21%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ DI+ QE+ A V + S + Sbjct: 20 FQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPSATPIHQDHFVRLLVEKLAE 79 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 80 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTSSEILVSDVDDPTDYHTRRVAVAETA- 137 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V +HL + D Q ++W I + + P ++A Sbjct: 138 VDGREVAVASVHLS---WWDKG------------FQ----EEWARIEGRFQSIGKPLILA 178 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRNKIPIDYFVMD 263 GDFN G + DS + S + K + IDY Sbjct: 179 GDFNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYVFAS 238 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Q ++ + ++++ ++ +SDH + + F Sbjct: 239 Q---EWAVNH--LSVIFDGNN----QPLVSDHYGLEAELTF 270 >gi|154506602|ref|ZP_02043059.1| hypothetical protein RUMGNA_03869 [Ruminococcus gnavus ATCC 29149] gi|153793355|gb|EDN75777.1| hypothetical protein RUMGNA_03869 [Ruminococcus gnavus ATCC 29149] Length = 363 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 113/327 (34%), Gaps = 75/327 (22%) Query: 25 RLVSWNINTLSEQEGVSLW----KNSVKRT-TSDYTLLRQYAK---NLDADIVFLQEMGS 76 R+ S NI + + S + K S R+ + + YA+ L+ D + QE+ Sbjct: 60 RITSGNIGFGAYSDDYSFFMDGGKESRARSKDAVIENVSSYAEAVAQLNPDFMLFQEVDI 119 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA-------------------IAVR 117 + + + + S +++ R+ + + V Sbjct: 120 DG--TRSYHVDERKLLLSQTLSTDNTSRNYTFAQNYDSPYLFYPILEPHGKNKSGMLTVS 177 Query: 118 K-KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K +++S P+ +V + NGK++ + ++HL + T Sbjct: 178 NMKITESIRRSLPIEDGFMKLLDLDRCYSVNRIPTENGKELVLYNLHLSA--------YT 229 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GDFNRKI---------NYLGNNDD--- 223 PS Q + L + + ++ ++ +++A GDFN+ + + ++ Sbjct: 230 SDPS--TADNQLRMLFEDMKEEYDAG-NYIVAGGDFNKDLLGNSAEIFGHKELEDNWAKP 286 Query: 224 --------FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 F + I P D P +++ + +D F++ N Sbjct: 287 ISEELIPDFMQLIAPFDEKNPVPSCRNAD-QPYSESDFVVTVDGFLVSDN---------- 335 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + G + SDH P+ +D+ Sbjct: 336 --VTVEDALVLDTGFKWSDHNPVYMDF 360 >gi|83718276|ref|YP_438732.1| extracellular nuclease [Burkholderia thailandensis E264] gi|83652101|gb|ABC36165.1| extracellular nuclease, putative [Burkholderia thailandensis E264] Length = 622 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 104/325 (32%), Gaps = 67/325 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R + ++ + K LDAD++ L E+ Sbjct: 292 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 351 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ ++W + D + A+ + ++ Sbjct: 352 NDGYGPLSAVRQLAAKLGDSWRVV------------DPGSARLGGDAIAVALIYDSRKVK 399 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FC---FLDSLENTYSPSC- 181 P+ A NR+ + + + + V HLKS C D L+ C Sbjct: 400 PVGNAATLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCW 459 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A + DW+ + ++ GD +N D +T++ + Sbjct: 460 NATRSRAAAKVADWLARNPTGAHSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVS 514 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSE 277 + + + +D+ + Y + + + Sbjct: 515 SKIGAPAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQ 574 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 575 RTYYAPD----AYRSSDHDPVLIDI 595 >gi|228942241|ref|ZP_04104781.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975171|ref|ZP_04135730.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981810|ref|ZP_04142105.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228777922|gb|EEM26194.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228784692|gb|EEM32712.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817575|gb|EEM63660.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942895|gb|AEA18791.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 352 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ +I GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIIGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|188575171|ref|YP_001912100.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519623|gb|ACD57568.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 319 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 99/303 (32%), Gaps = 49/303 (16%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 48 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+ QE + P+ + R +R +D H + + V Sbjct: 101 PDVFGTQE---------LVPEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSV 151 Query: 124 LQQSY------PLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLEN 175 ++ P + S++ R L E + ++ ++L+ HL D E Sbjct: 152 IESGDFWLSETPEVPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLP---HRDQDEA 208 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 ++ + L +P V+ GDFN + G + + + Sbjct: 209 AREHGARVILSRIATLPA--------DIPVVVTGDFNSDPDQ-GTYRTLTAVLGDARAHV 259 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 P+ + + ID +++ + ++ D + G SDH Sbjct: 260 AKPQGPEKTFQNFTTQPTR-RID----------WILFRGLTPTRFSTLDARPGGILPSDH 308 Query: 296 CPI 298 P+ Sbjct: 309 YPV 311 >gi|15889021|ref|NP_354702.1| exonuclease III [Agrobacterium tumefaciens str. C58] gi|15156812|gb|AAK87487.1| exonuclease III [Agrobacterium tumefaciens str. C58] Length = 265 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 94/307 (30%), Gaps = 72/307 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN R L Q+ K+ DIV LQE+ S + Sbjct: 1 MKIATWNIN------------GVKAR----IENLCQWLKDSSPDIVCLQEIKSVDE---- 40 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + + +A+ K D +R Sbjct: 41 -GFPRLEI-----EALGYHIETHGQKGFNGVALLSKVKPDEVNRGLPGDDADEQARF--- 91 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E + + G I V ++L + + + L+ + L+ + + Sbjct: 92 --IEGVFSVEGGAIRVCSLYLPNG----NPPDDPVKYPYKLAW-MERLRRFAEDRLAMEE 144 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKT----IDPNDSLIRFPKEK----------------- 241 P ++AGD+N +D W+ + + R + Sbjct: 145 PLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAAFRKLENLGFTDAARATTDAAGLYS 204 Query: 242 ----DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + N I ID+ ++ A L + + E +++ + SDH P Sbjct: 205 FWDYQAGAWPK---NNGIRIDHLMLSAEAADRL------QSVEIEKHVRAWE-KPSDHVP 254 Query: 298 ISIDYDF 304 + +DF Sbjct: 255 VCGYFDF 261 >gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 1007 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 32/198 (16%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++ +R+++WN + + RT +L + D D++ LQE Sbjct: 113 ASSPAIGLDLRILTWNTLW-------DRYDKDLIRTAERRPMLLAALRAADVDVIALQE- 164 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + A+ K+ W S++ + + V + V Sbjct: 165 -AEPALVKMLLAEDWV----RREWTLGGDPRSSDVADSGVLVLSRLPVVE-------AGW 212 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R A ++VE + V + HL S D + S L Q A L Sbjct: 213 HALGRYKAVAA--VVVEGGAGPVVVANTHLSS----DHSADGASLRTEQLGQLADGL--- 263 Query: 195 ITQKKESLVPFVIAGDFN 212 + VP V+ GDFN Sbjct: 264 ---RAIDAVPVVLVGDFN 278 >gi|323463737|gb|ADX75890.1| endonuclease/exonuclease/phosphatase family protein [Staphylococcus pseudintermedius ED99] Length = 623 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 96/337 (28%), Gaps = 77/337 (22%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNL-DADIVFLQEM-- 74 K+ + S+N+ S + + L ++ DIV + E+ Sbjct: 302 PSENKLTVASYNLENFS--------NDVKSSSDDKAQKLANGIVNHMKQPDIVGVTEVQD 353 Query: 75 ---------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + ++ T+ + + + N + +I + Sbjct: 354 NNGPNKGSSDASASYKRLIQAIKDAGGPTYR-YVNIDPENNVDGGQPDANIRVGF-LYNP 411 Query: 120 NVRVLQQSYPLLGAKDSFSRAGN-------------------RRAVELLVEINGKKIWVL 160 P A S + N R+++ + G+++ + Sbjct: 412 ERVTFNDHIPAGDATTSVAYENNQLTRNPGRITPQDPAFEDVRKSLAAQFDFKGQQVIAI 471 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT------QKKESLVPFVIAGDFNRK 214 H KS D L ++ P Q + I Q++ + GD+N Sbjct: 472 ANHWKSKRGDDGLFGSHQPVRLTSEPQRVEIAHRIGEFTAQVQQQNPNAAIISVGDYN-- 529 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-------IDYFVMDQNAY 267 D W + + + KN R +D+ ++ ++ Sbjct: 530 -------DFQWSKPLKTFESYGLTNKVN---DVPKNKRYSYVYQGNTQTLDHILVSEHLK 579 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +++ D R SDH PI DF Sbjct: 580 RQTKLD----MIHVNSDFTDMAGRASDHDPILAQIDF 612 >gi|145297705|ref|YP_001140546.1| phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] gi|142850477|gb|ABO88798.1| putative phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] Length = 438 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 94/302 (31%), Gaps = 58/302 (19%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 K+++ S+N+ L + + +R TLL Y K DA + LQE+ Sbjct: 168 EPSESKLKVASYNVWAL-----PVIASSIGER----LTLLPDYLKGYDA--LLLQEVFDG 216 Query: 77 -----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 A+AK +P + + +N +D I R VR Q YP Sbjct: 217 RREGFLQALAKEYP---YQTKVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQC 267 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----Q 187 D F+ G A + GK + H SF + L Q Q Sbjct: 268 TGTDCFADKGVMYAEVIK---GGKAWHLFATHTASF---------DTDEARQLRQIQFGQ 315 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK-----------INYLGNNDDFWKTIDPNDSLIR 236 + L + K + + GDFN + L ++ + Sbjct: 316 IRTLAA--SLKIPASDTVIYGGDFNVNKRKFADDYASMLANLDAHEPGY---GGYTEATF 370 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 P+ N +DY V+ + + I + D LSDH Sbjct: 371 DPRINPYAGGPLSGGANVEYLDYLVVSREYGAASHNLNSVWIPRSSDGSLWPASNLSDHF 430 Query: 297 PI 298 P+ Sbjct: 431 PV 432 >gi|320354858|ref|YP_004196197.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] gi|320123360|gb|ADW18906.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] Length = 243 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 96/297 (32%), Gaps = 70/297 (23%) Query: 24 VRLVSWNINTLSEQEG---VSLWKNSVKRTTSD-YTLLRQYAKNLDADIVFLQEMGSYNA 79 +R + +NI + R + D ++ +R++ +++ D++ L E+ + Sbjct: 1 MRFLLYNIRYAAGHGSRFHFPFPYAGYLRHSHDNFSKIREFIRSVQPDVMGLVEVDGGS- 59 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-------YPLLG 132 F + E L + + A K + +L+ P++ Sbjct: 60 ----FRTDQ---LCQAEMLADQLGYYHVIETKYGSASMAKRLPLLKTQGNAVLTRMPIIS 112 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + + G +R L++++ +++ + +HL SL Q + L Sbjct: 113 HRFHYFDEGVKR---LVIQVCTERLTIFLVHL-------SLTYRNR------QYQLERLY 156 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 I Q P ++AGDFN + ++ L S N K Sbjct: 157 KLIRQVDR---PMILAGDFNVL--------WGMRELE----LFLGATGLIS-ANPEKKPS 200 Query: 253 NKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ L + ++ + SDH P+ D+ F Sbjct: 201 YPSRAPKRELDFI---------LHSPELKVVHFHIPSVTY-----SDHAPLICDFTF 243 >gi|299147485|ref|ZP_07040550.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298514763|gb|EFI38647.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 316 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 101/328 (30%), Gaps = 45/328 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLL 57 ++ +L + +V C + + + S+N+ + G S+ N +R Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLR--NANGGDSINGNGWGQR----YPVI 56 Query: 58 RQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 Q + D DI QE + + + P + + Sbjct: 57 AQIVQYHDFDIFGTQECFIHQLKDMKEALPGYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 116 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + + + D+ + G + ++H+ + Sbjct: 117 IEKGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKK 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN 231 S L+ + + L +P ++ GDFN + + Sbjct: 171 ARVESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEK 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL--------- 279 + + N ++ ID+ + + ++ +++ I+ Sbjct: 225 AGFRYAINGTFNDFDPNSFTESR--IDHIFVSPSFHVKKYGVLTDTYRSIVGKGEKKQAN 282 Query: 280 --YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ +F Sbjct: 283 DCPEEIDIKTYQARTPSDHFPVKVELEF 310 >gi|260494509|ref|ZP_05814639.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|260197671|gb|EEW95188.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 278 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 101/308 (32%), Gaps = 57/308 (18%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + AL F L T S+A + + S+NI L D + K Sbjct: 8 SIIFALFFIL--STLSLADEAYIASFNILRLGA-------------AKKDIVQTAKILKG 52 Query: 64 LDADIVFLQEMGSYNAVAKVFPK------NTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DIV L E+ + N V ++ + W S + + ++ I+ + Sbjct: 53 F--DIVGLVEVINRNGVEELVDELNKQSDEKWDYHISPFGVGSSKYKEYFAYIYK----K 106 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + + + + + R +I + +H + ++ Sbjct: 107 DKVKFIKSEGF-----YKNGKSSLLREPYGATFQIGNFDFTFVLVH---TIYGNNESQRK 158 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID----PND 232 + + ++ + ++ + E +IAGDFN + L + +K D D Sbjct: 159 AENYKMVD-----VYNYFQDRDEKENDILIAGDFN--LYALDESFRPLYKHADKITYAID 211 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 I+ R N D F Q + S + ++ D+ K + + Sbjct: 212 PAIKTTIGAKGRAN---------SYDNFFFSQKYSQEFTGSSG-ALDFSGDNPKLMREIV 261 Query: 293 SDHCPISI 300 SDH P+ I Sbjct: 262 SDHIPVFI 269 >gi|193222381|emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 254 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 86/310 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE---MGSYNA 79 ++L +WN+N+L + V++ D + D++ LQE + Sbjct: 1 MKLATWNVNSL------KVRLPQVQQWLVD-----------NPVDVLCLQETKTVDEKFP 43 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFS 138 VA++ + + ++ ++ + +A+ ++ ++ PLL + Sbjct: 44 VAEI-EAAGYQVAFTGQKT------------YNGVAILSRHPITDVTKNNPLLDDEQQRI 90 Query: 139 RAGNRRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 AG + + ++ NG+ DS + Y + + L +W+ Sbjct: 91 IAGTIQGIRIVCAYVPNGQS-------------PDSDKYIYKLN------WLKALHEWLA 131 Query: 197 QKKESLVPFVIAGDFNRKINYLGNND---DFWKTIDPNDSLIRFPKEKDSRC-------- 245 Q+++ + GD+N +D + + F + ++ Sbjct: 132 QEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFE 191 Query: 246 NANKNLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K ID+ ++ + D + + ++ S Sbjct: 192 QPEKLYSWWDYRQMGFRLNRGLRIDHILLS-------APLAARCSACVIDKVPRKWEQPS 244 Query: 294 DHCPISIDYD 303 DH P+ D Sbjct: 245 DHTPVIATID 254 >gi|163734486|ref|ZP_02141926.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149] gi|161392494|gb|EDQ16823.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149] Length = 280 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 54/297 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 T + +R++SWN+ +E D + L+ DI QE+ Sbjct: 29 TGPEKKPLRVLSWNV--FNENP--------------DAARIADALTALNPDIALFQEVLP 72 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV---RVLQQSYPLL 131 + FP + S R + I + R++ + + P Sbjct: 73 AHIAVIKASFP------YVSVARDYALKGELCHLVIASRFPTRRETILFHSDTSKPAPTR 126 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 A+ + +V + V+++H + + + + + S + L Sbjct: 127 WARHAGWVEFLDSLSVDVVVPGARPFRVVNLHTSAGVSPSARQAELAETQSHFDCEGPCL 186 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE----KDSRCNA 247 +AGDFN +Y + L PK+ + N+ Sbjct: 187 ---------------VAGDFN---SYAVP--WLAPLLAI--PLHYRPKDWLIFERRALNS 224 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + P + V + Q +I I+ R SDH P+S++ + Sbjct: 225 WFQRQGFAPAVHGVTFPKFRLQMDQLFTRDITVETAVIERRLWG-SDHRPLSLEINL 280 >gi|115384338|ref|XP_001208716.1| predicted protein [Aspergillus terreus NIH2624] gi|114196408|gb|EAU38108.1| predicted protein [Aspergillus terreus NIH2624] Length = 323 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 27/157 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 + S + +RL +WNI+ +RT + L Q +++FLQE Sbjct: 36 AASTSPLRNLRLTTWNIDF--------QVPCKNERTAAALRYLSQRPPAPYPEVIFLQEM 87 Query: 74 MGSYNAVAKVFP---KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + S + K P N + +ST+ + T V K+ P Sbjct: 88 VASDLELIKATPWVQDNFYITDFSTQHWLGSYG--------TTTLVDKRLPVERVFRVPY 139 Query: 131 LGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKS 166 ++ R A+ + + +N + + + HL+S Sbjct: 140 AASRMQ------RDALFVDIALNPNAPLRLCNTHLES 170 >gi|304320634|ref|YP_003854277.1| extracellular nuclease [Parvularcula bermudensis HTCC2503] gi|303299536|gb|ADM09135.1| extracellular nuclease [Parvularcula bermudensis HTCC2503] Length = 1471 Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 103/356 (28%), Gaps = 78/356 (21%) Query: 20 VAQKVRLVSWNI----NTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADI 68 V + + ++N+ TL + S N R +++ L Q ADI Sbjct: 748 VGGDLTVATFNVLNFFTTLDQNGNTSGPSNLEPRGADNQAEFDRQLDKLVQAIGQSGADI 807 Query: 69 VFLQEMGSY----------------NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + L E+ + +A+ FP T+ S D ++ I Sbjct: 808 LSLVELENEFADTNGDGQFAIGTLVDALNTAFPTETYAYV-----DPGQSFVDVSDAISV 862 Query: 113 AIAVRKKNVRVLQ---------QSYPLLGA----KDSFSRAGNRRAVELLVE--INGKKI 157 + V++ + P LG + NR A+ E G ++ Sbjct: 863 GFIYKTDKVQLAEGTTVEILSDADLPGLGLSFGQPVFDGVSTNRAALAATFEEIDGGGQV 922 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ-----WLKDWITQ--KKESLVPFVIAGD 210 ++ H KS S + + Q + L W+ +I GD Sbjct: 923 TLVANHFKSKGGSGSGGDADQGDGAGAFNQTRLNAAIALDAWLATDPTSSGDADVMILGD 982 Query: 211 FN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 N I YL + + + + + + + +DY + + Sbjct: 983 LNAYAMEDPIAYL--KNAGFTDLVDSLADTDYTYGFPVDLGIVPQAQGYGTLDYAFANAS 1040 Query: 266 AYKFLIQESFSEILYNEDDIKSRG-----------------KRLSDHCPISIDYDF 304 ++ + I +E + R SDH P+ I + Sbjct: 1041 LLSQVVDAAVWHINADEPPVIDYDLDFKPTEQEAYFDPSTPFRSSDHDPVLIGLNL 1096 >gi|332968196|gb|EGK07274.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)] Length = 251 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 40/202 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + + + ++NI + L ++ V + K ++ DI+ LQE+ N + Sbjct: 4 SNSITVTTYNI----HKGMSPLNRHVVT------QRMGLALKQINPDIMCLQEVQGQN-L 52 Query: 81 AKVFPKNTWCIFYSTERLINHS--------KRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 ++ N + H + + V P Sbjct: 53 KRMLKYNEYP------NQSQHEWFGEFLDCQHSYGKNSEYGNGHHGNAVLSRHPLDPKHN 106 Query: 133 AKDSFSRAGNRRAVELLVEING--KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + ++ R + V G + + VL HL + LEN +Q + Sbjct: 107 VNITVNKLEQRGVLHCEVLPLGWEEPVVVLCAHL------NLLENDR-------EKQYRA 153 Query: 191 LKDWITQKKESLVPFVIAGDFN 212 + ++ + P ++AGDFN Sbjct: 154 IAAYVNDTIDQNRPLILAGDFN 175 >gi|218260769|ref|ZP_03475911.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] gi|218224372|gb|EEC97022.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] Length = 353 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 49/217 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + + +V++N + ++ + Y K L DIV QE Sbjct: 93 AASEQEGTPLTVVTYNASHFYWDRKYTMNEA------------AAYIKKLQPDIVCFQEA 140 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGA 133 P + + + + + ++ I+ R + + YP+ Sbjct: 141 ----------PGDGYY-------HRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIHSV 183 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 K + + + ++ V IN + I V++ H ++ +P L +A+ +K+ Sbjct: 184 KALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPG-KSLEIRAKAVKN 242 Query: 194 WITQKKESLV------------------PFVIAGDFN 212 I Q K++ P ++ GDFN Sbjct: 243 LILQMKDNNRKRAIQADSIYAEIRRSPYPVIVCGDFN 279 >gi|262370848|ref|ZP_06064172.1| catabolite repression control protein [Acinetobacter johnsonii SH046] gi|262314210|gb|EEY95253.1| catabolite repression control protein [Acinetobacter johnsonii SH046] Length = 272 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 90/314 (28%), Gaps = 92/314 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+VS N+N L E ++ + DAD++ +QE + Sbjct: 14 LRVVSINVNGLRSAEKKGIF---------------DWIATSDADVICMQESRITHEQWTN 58 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 K P+ + ER + A+ + V DS R Sbjct: 59 KFKPEGWHTHLFPAERPG-----------YAGTAIYSRLPFVSVTDGLGFELADSQGRF- 106 Query: 142 NRRAVELLVEIN---GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + E + + + + ++L S + + L + Q LK W Sbjct: 107 ------ISAEFDLGLDQNVHICSLYLPSGSSGEEAQVRKDH---FLEEYKQILKQW---- 153 Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 ++ ++ GD+N I + + W +K S C ++ + +D Sbjct: 154 RDENKSVIVCGDYN--IVHKRIDIKNWSG-----------NQKASGCLPHE----RSWLD 196 Query: 259 YFV---------------------------MDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + I + + + + Sbjct: 197 HIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVNAWVYK 256 Query: 292 ---LSDHCPISIDY 302 SDH P+ IDY Sbjct: 257 ETWFSDHAPVIIDY 270 >gi|254438485|ref|ZP_05051979.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198253931|gb|EDY78245.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 289 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Query: 15 PCTASVAQKVRLVSWNIN--TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 P A +R+ ++N++ L +G + +R L+ K LDAD++ Q Sbjct: 21 PVQAPKPNTLRIATYNVHYIWLGRSQGDWSVGDWERRKGP----LQTAFKTLDADVIGFQ 76 Query: 73 EMGS 76 EM S Sbjct: 77 EMES 80 >gi|153805833|ref|ZP_01958501.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185] gi|149130510|gb|EDM21716.1| hypothetical protein BACCAC_00070 [Bacteroides caccae ATCC 43185] Length = 608 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 11/75 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K +L + L +A ++L+S+NI + + V ++ + Sbjct: 1 MKKNLLFIFAALFTFSAQAQNTLKLMSYNIKNANGMDNVC-----------NFQRIANVI 49 Query: 62 KNLDADIVFLQEMGS 76 N D+V +QE+ S Sbjct: 50 NNASPDVVAIQEVDS 64 >gi|58038967|ref|YP_190931.1| hypothetical protein GOX0496 [Gluconobacter oxydans 621H] gi|58001381|gb|AAW60275.1| Hypothetical protein GOX0496 [Gluconobacter oxydans 621H] Length = 1750 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 86/279 (30%), Gaps = 55/279 (19%) Query: 60 YAKNLD-ADIVFLQEMGS---------------YNAVAKVF---PKNTWCIFYSTERLIN 100 NLD D++ LQE+ A+ K T+ + + N Sbjct: 535 IVNNLDSPDVLALQEIQDDSGTTNDGTVSAEQNLAAIVKAIADAGGPTYS-WAEVDPTNN 593 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKKIW 158 S S +I + + L +G ++ S R + E NG+ + Sbjct: 594 ASGGVSGGNIRSVF-LYNPERVTLAAPVTTIGDEELASGTFKNTRLPLVGTFEFNGQSVT 652 Query: 159 VLDIHLKSFCFLDSLENTYSP------SCSLLSQ---QAQWLKDWITQKKESL--VPFVI 207 ++++HL S L + P + ++ QAQ++ +++ S I Sbjct: 653 LVNVHLSSQAGSSELYGSTQPPVNHGGTTGTVNNRIAQAQYITNYVNGLLTSDPTAKVGI 712 Query: 208 AGDFNRKINYLGNNDDFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD 263 GDFN D W + E S N +D+ + Sbjct: 713 LGDFN---------DTEWSDAQQVYANAGLTDMSTTEDPSNRYTYIFEGNAESLDHTI-- 761 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + F F I N + SDH P S+ Sbjct: 762 -GSSAFASAGKFETIHVNTGSLTGE----SDHDP-SVTL 794 >gi|213028732|ref|ZP_03343179.1| hypothetical protein Salmonelentericaenterica_43473 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 126 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 31/151 (20%) Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 + I V+ +HL L ++ + Q L W+ ES P ++AGDFN Sbjct: 7 NRPIHVMCVHL-------GLRESHRQA------QLTMLAGWVNALPES-EPVLVAGDFN- 51 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQE 273 D K P ++ + + +P+ +D+ K Sbjct: 52 --------DWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPL--LRLDRIYVKNANAS 101 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 S + + LSDH P+S + Sbjct: 102 SPGALP------LRNWRHLSDHAPLSAEIHL 126 >gi|257141810|ref|ZP_05590072.1| extracellular nuclease, putative [Burkholderia thailandensis E264] Length = 613 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 104/325 (32%), Gaps = 67/325 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R + ++ + K LDAD++ L E+ Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ ++W + D + A+ + ++ Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVV------------DPGSARLGGDAIAVALIYDSRKVK 390 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FC---FLDSLENTYSPSC- 181 P+ A NR+ + + + + V HLKS C D L+ C Sbjct: 391 PVGNAATLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCW 450 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A + DW+ + ++ GD +N D +T++ + Sbjct: 451 NATRSRAAAKVADWLARNPTGAHSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVS 505 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSE 277 + + + +D+ + Y + + + Sbjct: 506 SKIGAPAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQ 565 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 566 RTYYAPD----AYRSSDHDPVLIDI 586 >gi|237795265|ref|YP_002862817.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] gi|229264066|gb|ACQ55099.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] Length = 352 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 ++ + S + + + K + V L+ + R Sbjct: 134 KVYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E NG+++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRISLE-NGRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N + + + +DH P+++ Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI--EVTSVKAHSMEFKN----------TDHNPVNM 347 Query: 301 DYDF 304 ++ Sbjct: 348 EFKL 351 >gi|167577079|ref|ZP_02369953.1| extracellular nuclease, putative [Burkholderia thailandensis TXDOH] Length = 613 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 104/325 (32%), Gaps = 67/325 (20%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADIVFLQEMG 75 +R+ S+N +N + + + R + ++ + K LDAD++ L E+ Sbjct: 283 LRVASFNVLNYFNGDGTGGGFDDPNNRGAKSDEEFARQDAKIVSALKALDADVIGLMEIE 342 Query: 76 SYN-----AVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + AV ++ ++W + D + A+ + ++ Sbjct: 343 NDGYGPLSAVRQLAAKLGDSWRVV------------DPGSARLGGDAIAVALIYDSRKVK 390 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS-FC---FLDSLENTYSPSC- 181 P+ A NR+ + + + + V HLKS C D L+ C Sbjct: 391 PVGNAATLAIDDKNRQPIAQTFQPFGGSRAVTVAVNHLKSKNCPNATGDDLDQGDGQGCW 450 Query: 182 -SLLSQQAQWLKDWITQK--KESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + S+ A + DW+ + ++ GD +N D +T++ + Sbjct: 451 NATRSRAAAKVADWLARNPTGAHSEGVLLIGD----LNSYTYEDPV-RTLESRGYVNLVS 505 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQN---------------------AYKFLIQESFSE 277 + + + +D+ + Y + + + Sbjct: 506 SKIGAPAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKTAEQQ 565 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDY 302 Y D R SDH P+ ID Sbjct: 566 RTYYAPD----AYRSSDHDPVLIDI 586 >gi|186474872|ref|YP_001856342.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184191331|gb|ACC69296.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 265 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 69/203 (33%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ +++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRSPLGFQAWEAMQRWVESVHADAYFLQE-----AMARRMPGP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGARMGDYDNDVWHCQATEIADSLQLQIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + RR + + G + +L HL +L +Q Sbjct: 123 GGRWDISAHRFERRGLLVARATFGGHSVSLLCAHL-------ALTRQAR------LRQMH 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI+++ + P V+AGDFN Sbjct: 170 WIAHWISKEAPAG-PLVLAGDFN 191 >gi|262401910|ref|ZP_06078475.1| extracellular nuclease-related protein [Vibrio sp. RC586] gi|262351882|gb|EEZ01013.1| extracellular nuclease-related protein [Vibrio sp. RC586] Length = 870 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 56/380 (14%), Positives = 110/380 (28%), Gaps = 105/380 (27%) Query: 22 QKVRLVSWN-INTLSEQEGVSLWKNSVKRTT---SDYT----LLRQYAKNLDADIVFLQE 73 +R+ ++N +N + G ++ R +++ + LDADIV L E Sbjct: 471 GDLRIATFNVLNYFNSPFGGDANQHGDNRGANSLAEFEVQQAKIVNAIVRLDADIVGLME 530 Query: 74 MGSYN-----AVAKVFP---------KNTWCIFYSTERLINHSKRDSNND---IHTAIAV 116 + + A+A++ K + + + I T + Sbjct: 531 IENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIY 590 Query: 117 RKKNVRVLQQSYPLLGAKDS------------FSRAGNRRAVELLVEI--NGKKIWVLDI 162 R K V++ Q + ++ + + R + ++ +KI V Sbjct: 591 RDKVVKLAQNRVIPMPSQQAPEVVDANGKVVEDGKNYQRDTLAPTFKVKGGNEKITVAVN 650 Query: 163 HLK---SFCFLDSLEN----------TYSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIA 208 HLK S C+ D+ Y +C A L D + + VI Sbjct: 651 HLKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHK---VIL 707 Query: 209 GDFNRKINYLGNNDDFW-----------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP- 256 GD N G D KTI + E+ A Sbjct: 708 GDMN----SYGMEDPMLVLTDYTPEKYGKTIRAARNTYLAGVEQFGDAGAEIKHSYGYLN 763 Query: 257 --------------------IDYFVMDQNAYKFLIQ------ESFSEILYNEDD-----I 285 +D+ ++ + ++ L++ +D + Sbjct: 764 AVAIKHPDSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNL 823 Query: 286 KSRGKRL--SDHCPISIDYD 303 + SDH P ++ + Sbjct: 824 PKYKDQFRASDHDPAVLELN 843 >gi|149187109|ref|ZP_01865414.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] gi|148829261|gb|EDL47707.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] Length = 233 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 44/196 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ S+NI + V L + D + +DADI+ LQE + Sbjct: 2 RLTFASYNI-----HKAVGLDR------KRDPERILSVLHEIDADIIALQEADRRIGARE 50 Query: 83 V------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + W + +R + + + V + L P Sbjct: 51 SCLPRSEIDDSHWRLVEVAKRPRSIGWHGNALLVRRNFEVHEGEALDLPTLEP------- 103 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A + + G ++ ++ HL L Q + L ++ Sbjct: 104 ------RGAACGEITVEGHRLRIIGTHL-------DLSGLRRRD------QIRSLVGFV- 143 Query: 197 QKKESLVPFVIAGDFN 212 +K +P VI GDFN Sbjct: 144 EKCSRNLPTVIMGDFN 159 >gi|167041642|gb|ABZ06388.1| hypothetical protein ALOHA_HF4000009G21ctg1g24 [uncultured marine microorganism HF4000_009G21] Length = 101 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 11/73 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + + ++ + A V ++ WNI G L N + + + Sbjct: 22 PIFITVFVLILGFQQASADSVTILEWNI------SGNELNGNITNQNAA-----AAIFNS 70 Query: 64 LDADIVFLQEMGS 76 +ADI+ LQE GS Sbjct: 71 ENADIIALQETGS 83 >gi|58583572|ref|YP_202588.1| hypothetical protein XOO3949 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428166|gb|AAW77203.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 342 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 33/295 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 71 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 123 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 124 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLS 183 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + P + S++ R L E + ++ ++L+ HL D E + Sbjct: 184 E-IPEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLP---HRDQDEAAREHVARV 239 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + L +P V+ GDFN + G + + + P+ + Sbjct: 240 ILSRIATLPA--------DIPVVVTGDFNSDPDQ-GTYRTLTAVLGDARAHVAKPQGPEK 290 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID +++ + ++ D +S G SDH P+ Sbjct: 291 TFQNFTTQPTR-RID----------WILFRGLTPTRFSTLDARSGGILPSDHYPV 334 >gi|254470152|ref|ZP_05083556.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] gi|211960463|gb|EEA95659.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] Length = 346 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 70/244 (28%), Gaps = 36/244 (14%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L++ + D++ QE S + F + + ++ K+D++ + + Sbjct: 131 EALQELIEKRQPDLIVFQETASATPRLQAFLRENYQ-----YAILPPEKKDTDLTVFSKF 185 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + + P LG R V + NG+KI + IH S Sbjct: 186 PLENSKRNL----VPGLGFNGYIPREFLSADVNV----NGRKIQLYAIH------PASPR 231 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + ++ I QK + P ++ GD+N + Sbjct: 232 SKRRLNGRTTY--VDYVSKHI-QKHRTDTPIMVLGDWNTPVWSDTFQKLLADLKLKTTFT 288 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P+ N +D+ + D+ SD Sbjct: 289 SFVPQTTRYFINPFLGKVLGSKVDHITSSEKI--------------IIKDLMIGEDVGSD 334 Query: 295 HCPI 298 H PI Sbjct: 335 HFPI 338 >gi|145299175|ref|YP_001142016.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida A449] gi|142851947|gb|ABO90268.1| extracellular nuclease [Aeromonas salmonicida subsp. salmonicida A449] Length = 1072 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 77/237 (32%), Gaps = 53/237 (22%) Query: 21 AQKVRLVSWN-INTLSEQEGVSLWKNSVKR---TTSDYTLLR----QYAKNLDADIVFLQ 72 A +R+ S+N +N + G R T +++ R L+AD+V L Sbjct: 474 AGDLRVASFNVLNFFTTVVGGDANPTGSNRGALTVAEFEKQRTKIVSAITRLNADVVGLM 533 Query: 73 EMG-----SYNAVAKVF---------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR- 117 E+ +A+A + + + + S + + + I + R Sbjct: 534 EIENNGYGDNSAIANLVEALNAAQPDEADHYRLIASPDGQPIGT-----DAITVGLIYRP 588 Query: 118 -----KKNVRVLQQSYPLLGAKDSFS-----RAGNRRAV--ELLVEINGKKIWVLDIHLK 165 + ++ A D+ G R +V + + ++ HLK Sbjct: 589 ASVTPQGAASLIVLPVQQAEALDASGKPVAINQGMRESVLQQFSSPKGDAPLTLVVNHLK 648 Query: 166 ---SFCFLDSLENTYSPS------CSLLS-QQAQWLKDWITQKKESLVPFVIAGDFN 212 S CF D + + C+ L A+ L + + +I GD N Sbjct: 649 SKGSACFEDYPDYASADPLDGQGHCNALRVSAAKVLGESLKALSG---DLLIIGDLN 702 >gi|324515144|gb|ADY46104.1| Neutral sphingomyelinase [Ascaris suum] Length = 426 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 76/236 (32%), Gaps = 44/236 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 +R+++ N Q ++ R + L + + + DI+ LQE+ S Sbjct: 15 LRVITLNC-WALPQPWPVGSRDRQYR----LSKLCEALLSTNYDIISLQEIWSVRDFDRI 69 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +A+ V+P + + I R V L Y L G Sbjct: 70 NSAIKDVYPYSYY-------------FHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHH 116 Query: 137 FSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWL 191 R + +EI +I HL + E L + QA L Sbjct: 117 IHRGDWFGGKVVGMVQLEIGTYRINFYATHLHA-------EYDRENDLYLPHRLSQAFEL 169 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--RFPKEKDSRC 245 ++ + ++ GDFN L +D ++ I N +LI + S C Sbjct: 170 SQFVKHTSHAADLTILTGDFN-----LEPDDLGYRLIVDNANLIDAWLARPNKSGC 220 >gi|317125305|ref|YP_004099417.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] gi|315589393|gb|ADU48690.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] Length = 343 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 34/214 (15%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV--FPKNTWCIFYSTERLINHSKRDSNND 109 +D + + D++ E+ + A+A + + W I E Sbjct: 124 ADAEQVADAVRAEAVDVLVATEV-TPEALAALDEAGLDQWFIEEVGETRPES-------- 174 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 +T V + + A + E++V++ G + V +H+ + Sbjct: 175 -YTGTMVFSRFPATETTGEDPVDAHTPSLQP------EVVVDVTGTAVRVKAVHVPAPLA 227 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 D++E + + L W ++E P ++AGDFN + T + Sbjct: 228 GDTVEWRAA---------LRALATW-RDRQEGSEPVLLAGDFNASRGHPAFR----HTAE 273 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPI--DYFV 261 D + R R I D+ + Sbjct: 274 GFDDAHQVAGLGWVRTWPFVGQRVPPYIQLDHLL 307 >gi|260550183|ref|ZP_05824396.1| catabolite repression control protein [Acinetobacter sp. RUH2624] gi|260406711|gb|EEX00191.1| catabolite repression control protein [Acinetobacter sp. RUH2624] Length = 280 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 82/281 (29%), Gaps = 77/281 (27%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 38 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 86 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 87 AIYSRLPFVSIKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 139 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 140 EAQARKDL---FLGEYAKILKQW----RDENKSIIICGDYN--IVHKRIDIKNWSG---- 186 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFV---------------------------MDQ 264 +K S C ++ + +D+ Sbjct: 187 -------NQKSSGCLPHE----RAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARA 235 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKR---LSDHCPISIDY 302 + I + + + + SDH P+ IDY Sbjct: 236 KNVGWRIDYQACSPDWKARTVNAWVYKDQWFSDHAPVIIDY 276 >gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695] gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695] Length = 250 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|307324753|ref|ZP_07603959.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306889635|gb|EFN20615.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 380 Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 77/300 (25%), Gaps = 50/300 (16%) Query: 19 SVAQKVRLVSWNI----NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + ++++N+ LS R L Y DIV +QE Sbjct: 38 AATGTFNVLTYNVAGLPEGLSSGHPAKNTPLISPR-------LGAY------DIVNVQE- 83 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 N Y+ + + + + + Sbjct: 84 ----------DFNYHAALYAGDDHPYRTPTSGGAGLGDGLNTLSGLPYDDFERVKWNRCN 133 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + + + G + + ++H + L + L D+ Sbjct: 134 GTDCLTPKGFTLARVRPAEGAYLDLYNVHTNAGTTDADLAARRAN--------VTQLSDY 185 Query: 195 ITQKKESLVPFVIAGDFN----------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 IT + ++ GD N R + D W + S + Sbjct: 186 ITA-NSAGNAVLVMGDTNTRYTRAADNIRDLATRNGLTDAWVDLVRGGSAPPAGSDALV- 243 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 C+ +D + L + + + + GK LSDH P ++D + Sbjct: 244 CDPENVTDTCEVVDKVLYRSGPLLSLAATRYHNE--HTSFLDAEGKPLSDHYPHTVDLSW 301 >gi|324511832|gb|ADY44920.1| Neutral sphingomyelinase [Ascaris suum] Length = 392 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 76/236 (32%), Gaps = 44/236 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY------ 77 +R+++ N Q ++ R + L + + + DI+ LQE+ S Sbjct: 5 LRVITLNC-WALPQPWPVGSRDRQYR----LSKLCEALLSTNYDIISLQEIWSVRDFDRI 59 Query: 78 -NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +A+ V+P + + I R V L Y L G Sbjct: 60 NSAIKDVYPYSYY-------------FHSGFTGSGVCIFSRHAIVSTLMHRYSLNGFAHH 106 Query: 137 FSRAGNRRAVEL---LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ--QAQWL 191 R + +EI +I HL + E L + QA L Sbjct: 107 IHRGDWFGGKVVGMVQLEIGTYRINFYATHLHA-------EYDRENDLYLPHRLSQAFEL 159 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI--RFPKEKDSRC 245 ++ + ++ GDFN L +D ++ I N +LI + S C Sbjct: 160 SQFVKHTSHAADLTILTGDFN-----LEPDDLGYRLIVDNANLIDAWLARPNKSGC 210 >gi|293602541|ref|ZP_06684987.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819303|gb|EFF78338.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 288 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 44/197 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI +R + + L Y L D+VFLQE+ Sbjct: 4 IRVVSYNI--------HKGRSALGRRDSLNELRLGLY--GLRPDLVFLQEVQ-------- 45 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAI---AVRK--KNVRVLQQSYPLLGAKDSFS 138 +N H + + A A+R + L +P+L ++ Sbjct: 46 -GRNEQKSLLD----AQHESLAAALRLDVAYGRNAIRHATDHGNALLSRFPILDHENVDI 100 Query: 139 ---RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R R + +E++ + + +HL F S +Q L + I Sbjct: 101 SDHRLEQRGLLHARIEVDERPVHCFVVHL--GLFAGSRT-----------RQVLALTERI 147 Query: 196 TQKKESLVPFVIAGDFN 212 P +IAGDFN Sbjct: 148 RCMVPDGEPILIAGDFN 164 >gi|218186665|gb|EEC69092.1| hypothetical protein OsI_37986 [Oryza sativa Indica Group] Length = 470 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 12/74 (16%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P + R V+WN N+L + R SD+ Q+ +D D++ +QE Sbjct: 50 SPPAPREEEPRRFVTWNANSL------------LLRMKSDWPAFCQFVSRVDPDVICVQE 97 Query: 74 MGSYNAVAKVFPKN 87 + A +K PKN Sbjct: 98 VRMPAAGSKGAPKN 111 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 15/61 (24%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-----SDHCPISIDY 302 K ++ IDYF++ + ++ DI RG L SDHCP+S++ Sbjct: 408 GKYRGKRMRIDYFLVSEKLKDQIVSC----------DIHGRGIELEGFYGSDHCPVSLEL 457 Query: 303 D 303 Sbjct: 458 S 458 >gi|218440705|ref|YP_002379034.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218173433|gb|ACK72166.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 333 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 41/218 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTL----LRQYAKNLDADIVFLQEM 74 ++ ++N+ L+ L + R + DY L + Q + + ADI+ QE+ Sbjct: 7 TFKVGTFNLYNLA------LPNQTFHRFLHYSNHDYELKTTWIAQQLERMQADIIGFQEV 60 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 A+ + +N ++ N T +A+ K + Q Y + + Sbjct: 61 IHTEALLETIALAK------GYEKMNLVVPETENYKST-VALACKFPILDYQIYTVFPPE 113 Query: 135 DSFSRAGN-----RRA---VELLVEINGKKI-WVLDIHLKS-------FCFLDSLENTYS 178 F+ G R + + + +++ K I + +HLKS C Sbjct: 114 AHFNVQGVNIPFERFSKPILSVRIKLTQKIICTLFVVHLKSKAPIIPGNCDPRDPAERAR 173 Query: 179 PSCSLLSQQAQWLKD----WITQKKESLVPFVIAGDFN 212 L +A I K++ P ++ GD N Sbjct: 174 GQARALILRAAEATALRMILIETLKDTNHPVIVMGDVN 211 >gi|115488172|ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group] gi|77554323|gb|ABA97119.1| exodeoxyribonuclease III family protein, expressed [Oryza sativa Japonica Group] gi|113649080|dbj|BAF29592.1| Os12g0279600 [Oryza sativa Japonica Group] gi|215687325|dbj|BAG91875.1| unnamed protein product [Oryza sativa Japonica Group] gi|222616909|gb|EEE53041.1| hypothetical protein OsJ_35763 [Oryza sativa Japonica Group] Length = 379 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 12/74 (16%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 P + R V+WN N+L + R SD+ Q+ +D D++ +QE Sbjct: 50 SPPAPREEEPRRFVTWNANSL------------LLRMKSDWPAFCQFVSRVDPDVICVQE 97 Query: 74 MGSYNAVAKVFPKN 87 + A +K PKN Sbjct: 98 VRMPAAGSKGAPKN 111 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 15/61 (24%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-----SDHCPISIDY 302 K ++ IDYF++ + ++ DI RG L SDHCP+S++ Sbjct: 317 GKYRGKRMRIDYFLVSEKLKDQIVSC----------DIHGRGIELEGFYGSDHCPVSLEL 366 Query: 303 D 303 Sbjct: 367 S 367 >gi|254518532|ref|ZP_05130588.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] gi|226912281|gb|EEH97482.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] Length = 265 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 102/296 (34%), Gaps = 56/296 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 ++++++N L + + KR Y +L N D DI+ +QE+ + ++ Sbjct: 1 MKVMTFN---LRTDFLLDINNRWNKRKEIVYDILN----NNDCDIIGVQELNNKMFKDIS 53 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY-----PLLGAKDS 136 K P + I S L +R+ I V KK+ + ++ P Sbjct: 54 KEAPG--YNIIGSPRSLKYFIERND-------ILVSKKHKILEYSTFWLSEDPEKIGSAI 104 Query: 137 FSRAGNRRAVELLVEINGKKI-WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R L+ +N I V + HL D L + L + +++ Sbjct: 105 WYSVYPRICTTALIRLNDGNIVRVYNTHL------DFLLSKARE--YGLKKIGEYMD--- 153 Query: 196 TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 Q ++ P ++ GDFN + + + + + + + S+ Sbjct: 154 KQHEKDNYPAILMGDFNASPTSKAIKNFSEGKYSSKKFIAV-QDHKKEIYNMSTMSKFKG 212 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 NK + IDY + E F + + GK SDH P+ D Sbjct: 213 NKKGLH---IDYIFV---------TEEFKVLDTEILEYNKNGKYPSDHYPMIAKLD 256 >gi|170763963|ref|ZP_02636372.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] gi|170711168|gb|EDT23350.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] Length = 262 Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 22/112 (19%) Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNK--- 254 P++I GDFN + D+ + I N++ + K Sbjct: 164 EKTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 218 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY L + + N DD K G SDH P+ + + Sbjct: 219 EGKIIDYI---------LYSKEYEIKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|301618038|ref|XP_002938432.1| PREDICTED: deoxyribonuclease gamma-like [Xenopus (Silurana) tropicalis] Length = 269 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN Y+ N + + L + N D V+ Sbjct: 160 ENIILLGDFNADGAYVSNKKMKTIRLRTDPDLHWLIDDDTDTTAINTT---DFSYDRIVV 216 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGK--RLSDHCPISIDYD 303 + K ++ S + E+ S + +SDH P+ ++++ Sbjct: 217 HSSILKHVVPNSAKPFNFQEEYKMSYEEAVAVSDHYPVEVEFN 259 >gi|300769904|ref|ZP_07079783.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762380|gb|EFK59197.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 326 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 16/127 (12%) Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD------ 242 L +I + ++ GDFN ++ +N + + + K Sbjct: 201 DQLASFIKEH-SKDRAILLMGDFNAHYSFELDNVRNFIKETRMIDTWVYLENKGIVPHID 259 Query: 243 ---SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF--SEILYNEDDIKSRGKRLSDHCP 297 S + ++K ID + +A I ES+ L+ + LSDHC Sbjct: 260 PMYSAGDILAIRKDKESIDKIMFRNSADLHFIPESYAIENRLFTDKSGLP----LSDHCA 315 Query: 298 ISIDYDF 304 +S+ + + Sbjct: 316 VSLSFSW 322 >gi|110680975|ref|YP_683982.1| hypothetical protein RD1_3833 [Roseobacter denitrificans OCh 114] gi|109457091|gb|ABG33296.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 227 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 78/259 (30%), Gaps = 60/259 (23%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAK-VFP----KNTWCIFYSTERLINHSKRDS 106 D + +DAD+V LQE V P ++ + S Sbjct: 18 RDPDRVADVLLEIDADVVVLQEADRRTGTRAGVLPLERLEDELGYLLPDFSVRALSHGWH 77 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDIHLK 165 N I +L+ Y A+ + R AV + + + + ++ +HL Sbjct: 78 GNAI------------LLRSRYDSHAARRIDLPSIDPRGAVSVQI--SDPCVEIIGVHL- 122 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 T +Q L+ + + P ++AGDFN + Sbjct: 123 -----GLTPGTRR-------KQVDVLRQVLQDR---PHPVILAGDFN---------EWNL 158 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 K +D + S + R + +D FV+ + S Sbjct: 159 KRLDFGTDA-----QVVSPGLSFHAARPRAALDRFVLGPGVR---VVSSHVHK------- 203 Query: 286 KSRGKRLSDHCPISIDYDF 304 + R SDH PI I D Sbjct: 204 SNLAARASDHLPIVITVDL 222 >gi|18310037|ref|NP_561971.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens str. 13] gi|18144716|dbj|BAB80761.1| hypothetical protein [Clostridium perfringens str. 13] Length = 256 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 22/112 (19%) Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNK--- 254 P++I GDFN + D+ + I N++ + K Sbjct: 158 EKTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY 212 Query: 255 --IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY L + + N DD K G SDH P+ + + Sbjct: 213 EGKIIDYI---------LYSKEYEIKSLNIDDRKIDGGYPSDHYPVICELEL 255 >gi|312892184|ref|ZP_07751681.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] gi|311295314|gb|EFQ72486.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] Length = 369 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 57/176 (32%), Gaps = 38/176 (21%) Query: 145 AVELLVEINGKKIWVLDIHLKSF-------CFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 A+ + V+ + K V +HL+SF ++DS+ + + LK Sbjct: 211 AIFIDVKKDDKIFRVYCVHLQSFLLTAEDHVYMDSVSQKGKTNIRSSKRIVSKLKAAFIH 270 Query: 198 KKES-----------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + P+++AGDFN + N + + R R Sbjct: 271 RSAQVTMMKDHMAQCPYPYIVAGDFNDTPSSYAVN----QMSKGIKNAFREKGRGLGRTY 326 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + IDY ++ F + Y K+LSDH PI D Sbjct: 327 NGDIPNYQ--IDYILVSP---------QFDVLNYTV-----IEKKLSDHYPIRSDL 366 >gi|298674416|ref|YP_003726166.1| deoxyribonuclease I [Methanohalobium evestigatum Z-7303] gi|298287404|gb|ADI73370.1| Deoxyribonuclease I [Methanohalobium evestigatum Z-7303] Length = 447 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 87/296 (29%), Gaps = 54/296 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKNLDADIVFLQEM 74 + + + +R+ ++NI K S T + + R Y DI+ +QE+ Sbjct: 54 ASLNESDTLRIGAFNIQ------VFGTSKASEPETMNTIAKIIRNY------DIIAIQEI 101 Query: 75 GS------YNAVAKVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 V V + + S SK +TA ++ + Sbjct: 102 RDKSENSLPQLVELVNEGDYNYDFVMSERLGRTVSKEQYAYIYNTATV----DISNNPHT 157 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 YP D F R + +H P + ++ Sbjct: 158 YPEPEGTDPFHRQP--YIASFEAVNGNFDATFITVH-------------TDPDEAT--EE 200 Query: 188 AQWLK---DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 L ++ +K F++ GD N +Y + + ND + Sbjct: 201 INALDSVVEYTHEKYSEERDFIVMGDLNADGSYFDED---LDSTMHNDYYYWCIGDDIDT 257 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPI 298 + + D ++ + A + ++ Y++ + + SDH P+ Sbjct: 258 TTGSTDYTY----DRIIITEPAMEDFTDDAH-IYRYDDKYDLKHDETMDVSDHYPV 308 >gi|83718570|ref|YP_440771.1| hypothetical protein BTH_I0213 [Burkholderia thailandensis E264] gi|83652395|gb|ABC36458.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 230 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 45/201 (22%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI-NHSKRDSNNDIHTAIA 115 +R + ++ ADI FLQE A+A+ P+ + S D + T IA Sbjct: 1 MRNWVESTHADIYFLQE-----AMARRMPRP---VLASGFGTPMTEPADDIWHCQATEIA 52 Query: 116 -----------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKK 156 R N + L G D + RR + + G Sbjct: 53 HALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLGGGAP 112 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + +L HL + + L +Q W+ WI ++ P V+AGDFN + Sbjct: 113 VTLLCAHL-----------ALTRAARL--RQMHWIAHWI-ERNAGAGPLVLAGDFN---D 155 Query: 217 YLGNNDDFWKTIDPNDSLIRF 237 + ++ + I ++ Sbjct: 156 WRNDSIPLFGEIGLSEVATLL 176 >gi|257468371|ref|ZP_05632465.1| hypothetical protein FulcA4_03459 [Fusobacterium ulcerans ATCC 49185] gi|317062644|ref|ZP_07927129.1| dnase I-like protein dhp2 precursor [Fusobacterium ulcerans ATCC 49185] gi|313688320|gb|EFS25155.1| dnase I-like protein dhp2 precursor [Fusobacterium ulcerans ATCC 49185] Length = 274 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 101/305 (33%), Gaps = 46/305 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++K L ++FL+ AQ+ + S+N L ++ DY L Q Sbjct: 1 MKKIKLVFIYFLLA-MTIFAQEGYIASFNTLRLG-------------KSQKDYILTAQAL 46 Query: 62 KNLDADIVFLQEMGSYNAVAKV------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + DI L E+ V K+ W S + +S ++ + A Sbjct: 47 EMF--DIAGLIEVMDAEGVEKLINALEKVSGEKWDYHISPYPVGKNSYKE-----YFAYV 99 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 +K V L++ ++ F+R + + + +H F + Sbjct: 100 WKKDKVEFLKERGFYKDTEEKFARPP--YGADFKIGEFDFTFVL--VH---SVFGKNESA 152 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + + + D+ +IAGDFN G ++ F K + D +I Sbjct: 153 RRAEA-----FKMNEVYDYFQNLDLKENDVIIAGDFN----LSGFDESFEKLLSHPDKII 203 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K+L D + K +S + + + + ++SDH Sbjct: 204 YALSPVIKTTLGKKSL--ASSYDNMFLSTIYTKEFTGKSG-ALDFTQGQYRLMKDKISDH 260 Query: 296 CPISI 300 PI I Sbjct: 261 LPIFI 265 >gi|218130823|ref|ZP_03459627.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697] gi|217987167|gb|EEC53498.1| hypothetical protein BACEGG_02418 [Bacteroides eggerthii DSM 20697] Length = 371 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 65/209 (31%), Gaps = 45/209 (21%) Query: 24 VRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 + + ++N++ +E G S + + +Y + D++ QE Sbjct: 115 LTVATYNVHHFGNEITGYSCKE------------IARYMQQRHVDVLCFQE--------- 153 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 F N S R ++H ++R + YPL + + Sbjct: 154 -FGDNPHFTTDSLRRALSHWPYALIPADD---SIRGILPVAVFSRYPLAEGRFITYPRSS 209 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDS--------LENTYSPSCSLLSQQAQWLKDW 194 ++ + + + +L+ HL++ + N + A+ L + Sbjct: 210 NCSMACDIVLGADTLRLLNNHLQTTSVSQNRRKWERELAANDTRREAQAVQDAAETLHEN 269 Query: 195 ITQKKES-----------LVPFVIAGDFN 212 ++ P ++ GDFN Sbjct: 270 FVKRAAQTDSIVRLVIASPHPVLVCGDFN 298 >gi|260817292|ref|XP_002603521.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae] gi|229288840|gb|EEN59532.1| hypothetical protein BRAFLDRAFT_79056 [Branchiostoma floridae] Length = 282 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 74/257 (28%), Gaps = 50/257 (19%) Query: 67 DIVFLQEMGS------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 DI+ +QE+ + + +V + + S SK A R Sbjct: 54 DILLIQEVRDSTGTAIVDLLNRVNSAGHANYGMVISDRLGRTTSKEQ------YAFFYRT 107 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIW---VLDIHLKSFCFLDSLE 174 + SY ++ R + + + ++ IH Sbjct: 108 DVGLTVTSSYHYDDGNEALGTDTFEREPFIVRFSSSRTAVHDFVLVAIH-----TSPDHA 162 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----FWKTIDP 230 + + + + W + +I GDFN NY+ + W Sbjct: 163 VEEIQALDTVRE--SIVSRW---RIT---DIMIMGDFNADCNYVRPSHWDSISLWTRYRT 214 Query: 231 NDSLI---RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESFSEILYNED-DI 285 D LI + C D V+ K ++ S S ++ + Sbjct: 215 YDWLIGHDADTTVTSTNCA----------YDRIVVSGPTLKGSVLPHSASVYDFSRNLHC 264 Query: 286 KSRGKRLSDHCPISIDY 302 + + +SDH P+ +D Sbjct: 265 NCQAEAVSDHYPVEVDL 281 >gi|134112357|ref|XP_775154.1| hypothetical protein CNBE4270 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257806|gb|EAL20507.1| hypothetical protein CNBE4270 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1312 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 106/337 (31%), Gaps = 70/337 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEM-----GSY 77 + +WNI+ S + + ++ L +++D DI+ QE+ Y Sbjct: 946 ICTWNID--------SAKPTDLNGSVANAHFLEDVLRSVDSPDIIVFGFQEVIPLTDKKY 997 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKR------------------------DSNNDIHTA 113 A +F + + +R+ + + +S + T Sbjct: 998 TAKTLLFGNKSKDGGAAADRVSHAYRHWLEKLQSAVKMASPSNCPYVKIHSESLVGLFTC 1057 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I V++ L+ + GN+ A+ + ++ I +++HL + + Sbjct: 1058 IFVKQSEKNFLRDLDITTVKRGIGGIYGNKGAIVSRLVMDDTSICFINVHLAAGQSQKAS 1117 Query: 174 ENTYSPS--------------------CSL--LSQQAQWLKDWITQKKESLVPFVIAGDF 211 N C L + +L + + + VI+ Sbjct: 1118 RNADLAGILEDKAIFPPADELPFVHGGCGTGILDHEMVFLNGDLNYRIDQRRENVISSIA 1177 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N ++ YL +D K + N + E+ A N DY D + + + Sbjct: 1178 NGELAYLLEHDQLRKEMRTNHAFRLRNFEEAPITFAPTYKYNPGTHDY---DSSEKRRIP 1234 Query: 272 QESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + +++ + +SDH P+S Y Sbjct: 1235 AWCDRILYKKSPRVQALNYQRYEPTVSDHRPVSAGYT 1271 >gi|296130666|ref|YP_003637916.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] gi|296022481|gb|ADG75717.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] Length = 260 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 49/169 (28%), Gaps = 40/169 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL ++NI + D + LDAD++ LQE+ + + Sbjct: 1 MRLATFNILHGRSLADGRV----------DLDRFADAVRRLDADVLALQEVDRAQS--RS 48 Query: 84 FPKNTWCIFYSTERLINH----------------SKRDSNNDIHTAIAVRKKNVRVLQQS 127 + + +H + ++ + IA+ + Sbjct: 49 HGADLTAVAADAMGAPHHRFAATLHGEPGLWVAGTGQEQPDTAAYGIALLSRRPVREWHV 108 Query: 128 YPLLGAKDSFS------------RAGNRRAVELLVEINGKKIWVLDIHL 164 L + R R A+ +V+ G + V+ HL Sbjct: 109 VALPALRRRTPVRFPGQRWPAFVRDEPRAALAAVVDGEGGPLTVVGTHL 157 >gi|222837088|gb|EEE75467.1| predicted protein [Populus trichocarpa] Length = 237 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 24/120 (20%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFCFLDSL 173 N + + +D +R V ++ + GK I V+ +HL L Sbjct: 43 HHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHL-------GL 95 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF-------NRKINYLGNNDDFWK 226 + + Q L +W+ + + P ++AGDF N + D+ + Sbjct: 96 REAHRQA------QLAMLAEWVNELPD-GEPVLVAGDFNDWRQKANHPLKVQAGLDEIFT 148 >gi|149238650|ref|XP_001525201.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450694|gb|EDK44950.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 547 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 24 VRLVSWNINTLSEQEGVSL----WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 + +W + +S+ L + + +T D D DIV LQE Sbjct: 109 LTFNTWGLKFVSKHRKHRLQAIADELANPKTVED-----------DYDIVALQE------ 151 Query: 80 VAKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGA 133 ++ + W N +R + I T +A+ ++ V +P+ G Sbjct: 152 ---IWCEEDWDYL--DRVCRNRYPYRRVFKSGIITGPGLAILSKQPIVETFLYRFPINGR 206 Query: 134 KDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 +F R + V I I +L+ H+ + + +C Q Sbjct: 207 SSAFFRGDWYVGKSISVTIFQPHKEGSLPIALLNSHMHAPYGHGDASYSTHRAC-----Q 261 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRK 214 A + K++ + GD N K Sbjct: 262 AWDFAKLVRMLKKAGYAVIQVGDLNSK 288 >gi|58267852|ref|XP_571082.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227316|gb|AAW43775.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1256 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 106/337 (31%), Gaps = 70/337 (20%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEM-----GSY 77 + +WNI+ S + + ++ L +++D DI+ QE+ Y Sbjct: 890 ICTWNID--------SAKPTDLNGSVANAHFLEDVLRSVDSPDIIVFGFQEVIPLTDKKY 941 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKR------------------------DSNNDIHTA 113 A +F + + +R+ + + +S + T Sbjct: 942 TAKTLLFGNKSKDGGAAADRVSHAYRHWLEKLQSAVKMASPSNCPYVKIHSESLVGLFTC 1001 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 I V++ L+ + GN+ A+ + ++ I +++HL + + Sbjct: 1002 IFVKQSEKNFLRDLDITTVKRGIGGIYGNKGAIVSRLVMDDTSICFINVHLAAGQSQKAS 1061 Query: 174 ENTYSPS--------------------CSL--LSQQAQWLKDWITQKKESLVPFVIAGDF 211 N C L + +L + + + VI+ Sbjct: 1062 RNADLAGILEDKAIFPPADELPFVHGGCGTGILDHEMVFLNGDLNYRIDQRRENVISSIA 1121 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N ++ YL +D K + N + E+ A N DY D + + + Sbjct: 1122 NGELAYLLEHDQLRKEMRTNHAFRLRNFEEAPITFAPTYKYNPGTHDY---DSSEKRRIP 1178 Query: 272 QESFSEILYNEDDIKSRGKR-----LSDHCPISIDYD 303 + +++ + +SDH P+S Y Sbjct: 1179 AWCDRILYKKSPRVQALNYQRYEPTVSDHRPVSAGYT 1215 >gi|16331188|ref|NP_441916.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] gi|1653682|dbj|BAA18594.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] Length = 275 Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 105/321 (32%), Gaps = 78/321 (24%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + + + + SWN+N++ ++ + + D++ LQE Sbjct: 1 MANLFFLGFPMDIASWNVNSVRSRQ----------------QHILDWLGTNPVDVLCLQE 44 Query: 74 --MGSYNAVAKVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + + F + + S ++ N R+ D+ A Sbjct: 45 TKVVDEDFPRQPFEEAGYHCHISGQKSYNGVAIFSREPLQDVKIGFAA---------LVE 95 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 P L D + V + ++++++ + LDS + Y + Sbjct: 96 PALTG-DLDEQKRVISGVY-------DGVRIVNLYVPNGSALDSEKYLYK------LRWL 141 Query: 189 QWLKDWITQKKESLVP-FVIAGDF----------------NRKINYLGNNDDFWKTI--- 228 L+ ++ Q + S P F++ GDF N + + + + Sbjct: 142 NLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAMEREALTEVLAIA 201 Query: 229 DPNDSLIRFPKEKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNED 283 + D+ +F +E RN+ ID+ +L + + + Sbjct: 202 NLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDH--------HYLTPQLYDQAQKCWI 253 Query: 284 DIKSRG-KRLSDHCPISIDYD 303 D + RG ++ SDH P+ + + Sbjct: 254 DREPRGWEKPSDHAPVVVTIN 274 >gi|289673873|ref|ZP_06494763.1| exonuclease III [Pseudomonas syringae pv. syringae FF5] Length = 270 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 55/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGQFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|229056209|ref|ZP_04195634.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228721126|gb|EEL72659.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 263 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 27/180 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKR----- 104 L + + D D++ LQE+ V F R +N + Sbjct: 20 IKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNIIWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 D++ +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTY-WKTRKIVSATIAYNDKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEG 184 >gi|186684269|ref|YP_001867465.1| endonuclease I [Nostoc punctiforme PCC 73102] gi|186466721|gb|ACC82522.1| Endonuclease I [Nostoc punctiforme PCC 73102] Length = 603 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 94/326 (28%), Gaps = 77/326 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS------ 76 + + ++N+ L + R D + Q NL+A DI+ L E+ Sbjct: 53 LTVATFNVENL----------DPKDRRFDDIAKIIQ--NNLNAPDIISLVEVQDNNGSIN 100 Query: 77 -------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA---------- 113 A+ + + F + + +I Sbjct: 101 DDVVNANETYQKLIAALENI-GSPAYD-FVDIAPSDDRDGGEPGGNIRVGLLFRPSRVTL 158 Query: 114 ------------IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 +A+ + + P + + +R+ + N +K++++ Sbjct: 159 AKLPKKGGSLDAVAITQGANDLDLSLNPGRIDPTNSAFEESRKPLAAEFIFNDQKLFIIA 218 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLG 219 H S S + +QA+ + +++ Q + + ++ GD N Sbjct: 219 NHFVSK-LGGSPSDVQRV------KQAEIVNEFVGQILEVDPQAKVIVLGDLN------D 265 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEI 278 D + L + + N ID+ ++ +N + + Sbjct: 266 LPDSLPLKTLKGNILENLTDSLPASDRFTFKFKGNPQLIDHLLVSENLSRVAQPK----- 320 Query: 279 LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + +SDH P+ + Sbjct: 321 IDIVHVNVGFSRPVSDHDPVIAAFTL 346 >gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16] Length = 250 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 86/307 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++L+SWN+N L + + D+ ++DAD+ +QE Sbjct: 1 MKLISWNVNGLRA---------CMTKGFMDF------FNSVDADVFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 S + ++ A++K G + Sbjct: 36 ----------SKMQQEQNTFEFKGYFDFWNCAIKKGYS----------GVVTFTKKEPLS 75 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQKKE 200 + + +E + K+ V+ +SF ++ + S LS + W K ++ + Sbjct: 76 VSYGINMEEHNKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE- 134 Query: 201 SLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRF----PKEK 241 P ++ GD N + + + + + + F P ++ Sbjct: 135 LKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNAGFIDTFRYFYPNKE 194 Query: 242 DSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-SDH 295 + + + + IDYF+ L D L SDH Sbjct: 195 KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRL------------KDALIYKDILGSDH 242 Query: 296 CPISIDY 302 CP+ ++ Sbjct: 243 CPVGLEL 249 >gi|294674138|ref|YP_003574754.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472322|gb|ADE81711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 311 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 53/267 (19%) Query: 66 ADIVFLQEMGSYNAVA-----KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V L E+ + + + + + ++ +R + + A A Sbjct: 70 PDLVALCEVENDSVMRDFTRRSLLRHAGYQYLMTSSPD----ERGIDVALLYAPASFAPI 125 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLV----EINGKKIWVLDIHLKSFCFLDSLENT 176 + P+ G R ++L ++G + V +H S + Sbjct: 126 RSYAIRVNPV---------EGMRVTRDILYACGETVSGDTLHVFVVHQPSKFGGEKHSRP 176 Query: 177 YSPSCSLLSQQAQWLKDWITQ-KKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + A L I + S ++AGDFN G + + L Sbjct: 177 FRLAV------ADRLCQSIDSIRAISPDAKLMVAGDFN-----DGALSPSLLQYEQHG-L 224 Query: 235 IRFPKEKDSRCNANKNLRNK---IPIDYFVMDQN-----------AYKFLIQESFSEILY 280 + K R K ID+ + + A KFL++E Y Sbjct: 225 VNLTKHAKGANGVRGTYRYKGEWESIDHILGSSSINNKVDTAFIHAPKFLLEEDARYGGY 284 Query: 281 NEDDI---KSRGKRLSDHCPISIDYDF 304 SDH P+ + F Sbjct: 285 RPRRTYIGPRYQGGFSDHLPLVVRLIF 311 >gi|218192410|gb|EEC74837.1| hypothetical protein OsI_10683 [Oryza sativa Indica Group] Length = 495 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 29/210 (13%) Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 VR R ++++ GN+ AV + ++ V HL S + Sbjct: 235 VRADLARFVRRASVSCVGCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDEAH 294 Query: 176 TYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------W 225 + + +LS+ + L + QK ++ GD N +I+ W Sbjct: 295 RNADATEILSRTTFPRGHSLN--LPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDW 352 Query: 226 KTIDPNDSLIRFPKEKDSRCN----------ANKNLRNKIPIDYFVMDQ-------NAYK 268 KT+ ND L + + + Y A Sbjct: 353 KTLLENDQLRSEVESEGGAFHGWNEGAIAFSPTYKYYPNSDTYYGCASHGRKGEKRRAPA 412 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + RLSDH P+ Sbjct: 413 WCDRILWRGAGLKQKRYDRCESRLSDHRPV 442 >gi|330982162|gb|EGH80265.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 155 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 55/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGQFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|121602932|ref|YP_980261.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] gi|120591901|gb|ABM35340.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] Length = 277 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 85/262 (32%), Gaps = 48/262 (18%) Query: 54 YTLLRQYAKNLDADIVFLQEMGS--YNAVAKV--FPKNTWCIFYSTERLIN--HSKRDSN 107 + LR + + AD+VFLQE+ K +P+ + + + + Sbjct: 53 LSELRDAVRTVGADVVFLQEVAGSHLKHAEKFDNYPEEPHYEYLADSIWEQFAYGRNAVY 112 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHL 164 H AV K V ++ +D RR + EL V + + + +HL Sbjct: 113 THGHHGNAVLSKFPIVRFEN------RDISISGPERRGMLHCELQVPGQSRNVHAICVHL 166 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNND 222 C L+ ++ P V+AGDFN R+ + Sbjct: 167 --GLVESHRTQQMKLVCDLVRKEIPV-----------RAPVVVAGDFNDWRRRAH----- 208 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 + +L + + A + ++P+ +D+ + I S + Sbjct: 209 ---AQMAKGANLHEVFVQ--ANGQAARTFPARLPL--LQLDRIYVRNAIGHSPIVLP--- 258 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 LSDH P++ + Sbjct: 259 ---SHPWSHLSDHAPLAAEIRL 277 >gi|238763171|ref|ZP_04624137.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] gi|238698670|gb|EEP91421.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] Length = 271 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 79/309 (25%), Gaps = 79/309 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFP 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + +V ++ + +FY H +A + + + + Sbjct: 47 LEEV-SQHGYHVFY------------HGQKGHYGVA-----LLTKNEPLAVRRGFPTDEE 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + V++ F + + L+ ++ Q+ Sbjct: 89 DAQRRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQL 143 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPK 239 S +I GD N I W N L+ + Sbjct: 144 SSDAQVLIMGDVNISPTDMDIGIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFR 203 Query: 240 EKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + CN + ID + I D Sbjct: 204 AANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYDIRSM 256 Query: 290 KRLSDHCPI 298 ++ SDH P+ Sbjct: 257 EKPSDHAPV 265 >gi|229164042|ref|ZP_04291979.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228619425|gb|EEK76314.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 342 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 70/318 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T + + + +N ++D LQE+ Sbjct: 46 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKKMLSFLQNENSDFALLQEVD- 104 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AIAVRKKN 120 ++ + F N ++ ++ + T ++ K Sbjct: 105 IKSL-RSFDVNEHEFL---KKGLSEYSSSFGKNYDTKWVPVPVTSPMGYAEAGLSTFSKY 160 Query: 121 VRVLQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTY 177 + + L G + R +R VE + +N K + ++++HL + Y Sbjct: 161 TVQTAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKFVRLVNLHLSA----------Y 210 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 + QQA++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 211 DKGGKIRKQQAEYLKEYMNKHYQNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLVELP 270 Query: 238 PKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D K ID F++ N + Sbjct: 271 KGFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQ 321 Query: 282 EDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 322 GKDLKFEN---SDHNPVS 336 >gi|170084023|ref|XP_001873235.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650787|gb|EDR15027.1| predicted protein [Laccaria bicolor S238N-H82] Length = 476 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 51/251 (20%) Query: 23 KVRLVSWNI--NTLSEQEGVSLWK--NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 +R+++WN+ L ++ + +R L + + +ADI+ LQE+ Sbjct: 56 PIRVLTWNLLAQCLVRRQLFPASDCLKAGQREPV----LHREILSHNADILCLQEVDRLE 111 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKD 135 + V K + + + H + ++ K ++ LG + Sbjct: 112 QLLPVLQKAGYSHHFGSGPGKLHGSIIAYKAQRFSLVAEKVVYYDEERVRTDGSELGQRG 171 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDI---HL------------------------KSFC 168 + N + + +E N + L + HL K Sbjct: 172 VSFKTRN-IGMIVALEANNNQSDSLVVATTHLFWHPKYVIPLHRLPAIEIGLDIPMKGPG 230 Query: 169 FLDSLENTYSPSCS-LLSQQAQWLKDWITQ----KKESLVPFVIAGDFNRKINYLGNNDD 223 Y C L++QA L +++ P ++AGDFN +D Sbjct: 231 RDFGSPYKY--CCRFNLTRQAALLIREVSRFKVDHAVEEWPCIVAGDFN-----FPPDDP 283 Query: 224 FWKTIDPNDSL 234 + + ++ L Sbjct: 284 AYSLLSGDELL 294 >gi|187251652|ref|YP_001876134.1| exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] gi|186971812|gb|ACC98797.1| Exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] Length = 255 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 88/310 (28%), Gaps = 88/310 (28%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKV 83 R +SWN+N L + + DI+ LQE S + Sbjct: 4 RFISWNVNGLRAVAKKGFME---------------WFTKESPDILALQETKASPEQLEGG 48 Query: 84 FPKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA-- 140 + ++ST + ++ +AV K + D R Sbjct: 49 LKNPIGYHSYFST----------AERKGYSGVAVYSKEEPLSVSESIGNSTMDGEGRTLV 98 Query: 141 ---GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 N + + G+ ++ L+ F + L +Q Sbjct: 99 LEFKNFYFINIYFPNGGQGEHRIEYKLR---FYNEFLKLTQK----LMKQKTV------- 144 Query: 198 KKESLVPFVIAGDFN--RK---INYLGNND-----------DF--WKTIDPNDSLIRFPK 239 ++ GD N K + N+ + D+ F K Sbjct: 145 --------IVCGDVNTAHKETDLARPKENEGNTGFLPKERAWLDKFFENGLTDTFRLFTK 196 Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + + + IDYF++D + + Y ++ + SD Sbjct: 197 DGGHYTWWDYKTKARERNVGWRIDYFMIDTLSKNKVKNS------YMLPEV-----QGSD 245 Query: 295 HCPISIDYDF 304 HCPI+++ + Sbjct: 246 HCPIALEINL 255 >gi|33592450|ref|NP_880094.1| hypothetical protein BP1340 [Bordetella pertussis Tohama I] gi|33601810|ref|NP_889370.1| hypothetical protein BB2834 [Bordetella bronchiseptica RB50] gi|33572096|emb|CAE41632.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|33576247|emb|CAE33326.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] gi|332381866|gb|AEE66713.1| hypothetical protein BPTD_1326 [Bordetella pertussis CS] Length = 252 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 69/254 (27%), Gaps = 38/254 (14%) Query: 57 LRQYAKNLDADIVFLQEMGSYN---AVA--KVFPKNTWCIFYSTE-RLINHSKRDSNNDI 110 LR+ + D+VFLQE+ + A + + + T + + D Sbjct: 31 LREALREARPDLVFLQEVLGEHQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDG 90 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV K V ++ L R +++ + L +HL Sbjct: 91 HHGNAVLSKYPIVSHRNEDLSVGAAHEPRGMLHCVLDV--RDAPAPLHALCVHL--GLRE 146 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + C L Q ++AGDFN W+ Sbjct: 147 AHRQEQLRRLCQYLRQHVPA-----------QAAALLAGDFND-----------WRQRAD 184 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + +D+ + + + + Sbjct: 185 ATLARCGLADVHRLALGHAARTFPAACPLLRLDRIYVRNVAGSEPRRLS------RRPWS 238 Query: 291 RLSDHCPISIDYDF 304 RLSDH P++ + Sbjct: 239 RLSDHVPLAAEVTL 252 >gi|298487202|ref|ZP_07005251.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158226|gb|EFH99297.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 270 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 84/316 (26%), Gaps = 82/316 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF----SR 139 + ++ + + H +A L P L F Sbjct: 38 ---SDEQFPHAEVEALGYHVHFHGQKGHYGVA--------LLSRNPPLALHKGFEGDDEE 86 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 + R + NG+ + +++ F + + + L+ + Sbjct: 87 SQKRFIWGTCADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLESHF 141 Query: 200 ESLVPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPND 232 + P ++ GD N R + + W +D Sbjct: 142 SNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFR 201 Query: 233 SLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 L ++ S + + + ID + + D Sbjct: 202 HLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGLQPRIKAAGV-------DYDLR 254 Query: 288 RGKRLSDHCPISIDYD 303 ++ SDH PI ++ + Sbjct: 255 GMEKPSDHAPIWLELN 270 >gi|317047407|ref|YP_004115055.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] gi|316949024|gb|ADU68499.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] Length = 253 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 78/259 (30%), Gaps = 53/259 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKV-------------FPKNTWCIFYSTERLINHSK 103 LR A+ ADIVFLQE+ +A+ + W + + Sbjct: 33 LRDAARATSADIVFLQEVMGTHAIHSLHIENWPETSHYEFIADTMWHDYAYGRNAVYPEG 92 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 N AI R V + + G + +R ++ + + + V+ +H Sbjct: 93 HHGN-----AILSRFPIVEYENRDISVAGGE---NRGMLH--CKISLPGQPQPLHVICVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L C +++ P V+AGDFN ++ + Sbjct: 143 L--GLREPHRRAQLRMMCEMIASLPP------------DAPLVVAGDFN---DWQVRANP 185 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + K + + + +R + + +D + A Sbjct: 186 YLKRHAGLEEVFSLKSGRPARTFPARFPLLR--LDRIYVRNAAISQPWALPV-------- 235 Query: 284 DIKSRGKRLSDHCPISIDY 302 LSDH P++++ Sbjct: 236 ---KPWSHLSDHAPLAVEI 251 >gi|33597251|ref|NP_884894.1| hypothetical protein BPP2674 [Bordetella parapertussis 12822] gi|33573678|emb|CAE37967.1| conserved hypothetical protein [Bordetella parapertussis] Length = 252 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 38/254 (14%) Query: 57 LRQYAKNLDADIVFLQEMGSYN---AVA--KVFPKNTWCIFYSTE-RLINHSKRDSNNDI 110 LR+ + D+V LQE+ + A + + + T + + D Sbjct: 31 LREALREARPDLVLLQEVLGEHQRHAARHARWPAVSQYEFLADTLWSAYAYGRNAVYPDG 90 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 H AV K V ++ L R +++ + L +HL Sbjct: 91 HHGNAVLSKYPIVSHRNEDLSVGAAHEPRGMLHCVLDV--RDAPAPLHALCVHL--GLRE 146 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + C L Q ++AGDFN W+ Sbjct: 147 AHRQEQLRRLCQYLRQHVPA-----------QAAALLAGDFND-----------WRQRAD 184 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + + +D+ + + + + Sbjct: 185 ATLARCGLADVHRLALGHAARTFPAACPLLRLDRIYVRNVAGSEPRRLS------RRPWS 238 Query: 291 RLSDHCPISIDYDF 304 RLSDH P++ + Sbjct: 239 RLSDHVPLAAEVTL 252 >gi|254249188|ref|ZP_04942508.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184] gi|124875689|gb|EAY65679.1| hypothetical protein BCPG_04048 [Burkholderia cenocepacia PC184] Length = 604 Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 109/320 (34%), Gaps = 52/320 (16%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEM- 74 +R+ S+N +N + + + R + ++ + DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 75 ----GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 G +AV ++ N W + + + R + I A+A+ + +V Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRV------VDPGTSRLGGDAI--AVAMIYDSRKVEPVGR 404 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSC--S 182 A D +R ++ L + N + + V HLKS D+ + C Sbjct: 405 AATLAIDDKNRQPLAQSFRL-INGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNP 463 Query: 183 LLSQQAQWLKDWI--TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPND 232 ++ A + DW+ ++ GDFN R + G ++ + I N Sbjct: 464 TRTRAATKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPIRTLESRGYSNLVARWIGANA 523 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQN---AYKFLIQESFSEILYNEDD 284 + E +A L + + D+ Y + + + + D Sbjct: 524 YSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYAAD 583 Query: 285 IKSRGKRLSDHCPISIDYDF 304 R SDH P+ ID Sbjct: 584 ----AYRSSDHDPVLIDIAL 599 >gi|254391017|ref|ZP_05006226.1| hypothetical protein SSCG_03672 [Streptomyces clavuligerus ATCC 27064] gi|294816622|ref|ZP_06775264.1| endonuclease/exonuclease/phosphatase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197704713|gb|EDY50525.1| hypothetical protein SSCG_03672 [Streptomyces clavuligerus ATCC 27064] gi|294321437|gb|EFG03572.1| endonuclease/exonuclease/phosphatase domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 348 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 29/205 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNA 79 Q +R +WNI L G S R +L L D++ LQE G + Sbjct: 6 QLLRAGTWNI--LR---GGLGPDGSENRLHEQTEILA----TLHPDVLALQECSYGDHQG 56 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-FS 138 ++ + R + T + R +R++ + P Sbjct: 57 ERRLLGLAD---ALGMTPVAMEPSRVGDGLNFTTLLYRPGALRLVDRRRPAAQFFHHALI 113 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 RA R + E + + VL HL +++ + L++ + WL D Sbjct: 114 RARFRP---VDAEDDSRDFLVLATHL-----------SHAGGTARLAEVSSWLTDHAGDF 159 Query: 199 KESLVPFVIAGDFNRKINYLGNNDD 223 + ++ GD N + + D Sbjct: 160 PGAPRRSILMGDLNCSDFHDPDPDW 184 >gi|194365350|ref|YP_002027960.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194348154|gb|ACF51277.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 284 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 92/290 (31%), Gaps = 45/290 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++S+N+ T ++ E W + + + + ++ QE+ A Sbjct: 29 PLKVMSFNVRTPADTEPGKRWPDRR-------DAMVKVILDAHPAVIGTQELVKEQA--- 78 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLLGAKDS 136 + R +R + D H + K + + + P + S Sbjct: 79 ----DYLSEHLPGYRWFGEGRRGGSGDEHMGVFYDSKVLTIEESGNFWLSDTPDVPGSIS 134 Query: 137 FSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 + R + + ++ + +D HL + D E L+ ++ L Sbjct: 135 WGNLYPRMVTWAVFRRLDDDRRFYFMDTHLP---YRDEDEPRRVKGAELIGKRLASLPA- 190 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 +P V+ GDFN + F + + + + Sbjct: 191 -------DLPVVLTGDFNSEPG-GDTYKAFSRVLQDTRP------QVKAPQGPRLTFH-- 234 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ + +++ F + DD + G SDH P+ ++ D+ Sbjct: 235 ---DFTGKATSQLDWVLVRGFHARSFLTDDRRIDGVLPSDHFPLVVELDW 281 >gi|83951017|ref|ZP_00959750.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] gi|83838916|gb|EAP78212.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] Length = 341 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 L + A +RL +WN+ + G + ++R + + + + DI+ LQ Sbjct: 2 LFWAGGAGADTLRLATWNVE--LSRAGPGILLRDLRRGDAQADAVAEIIADHAPDILLLQ 59 Query: 73 EMG 75 + Sbjct: 60 GVD 62 >gi|67589620|ref|XP_665425.1| endonuclease/exonuclease/phosphatase [Cryptosporidium hominis TU502] gi|54656109|gb|EAL35196.1| endonuclease/exonuclease/phosphatase [Cryptosporidium hominis] Length = 507 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 33/227 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77 ++ +++N L + + T+ + + ++ADI+ LQE+ Sbjct: 10 DRISFLTFNAGLLEYRICGVKLYQNPPYTSHRLLQIPSALRGINADIIALQEVFDEKHSD 69 Query: 78 ---NAVAKVFPKNTWCIFYSTERLINHSKR-------DSNNDIHTAIAV--RKKNVRVLQ 125 ++ V+P + S + S R + +H + V + + Sbjct: 70 YIIESLQPVYP---YFARESKQSQNQKSMRWQPISVIHNQLALHNGLLVLSKYPILNARF 126 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + + + + V + + ++ + + +IH+ S N S + L Sbjct: 127 TCFSDVTLIEEWFVSKGMLEVTIQLPGMDKSPLTLFNIHMASG-----AVNPESETIETL 181 Query: 185 -SQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDD 223 +++ + L VI GD N NY + Sbjct: 182 RNKEIEQLLGACDHAIRRGEVPVIIGDLNAAPNCCGSNYNYFIDRGW 228 >gi|227819964|ref|YP_002823935.1| endonuclease/exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] gi|36958668|gb|AAQ87136.1| Dioxygenase [Sinorhizobium fredii NGR234] gi|227338963|gb|ACP23182.1| putative Endonuclease/Exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] Length = 264 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 74/258 (28%), Gaps = 48/258 (18%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 D + DI+ LQE+ A + + + + + H + Sbjct: 23 DPARIAAVIGECRPDIIALQEVDVGRA--RSGGIDQAHMIATHLNMAAHFHPALHLKDE- 79 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 R + + L+ A S R A+ + +++ ++ V+ HL Sbjct: 80 ----RYGDAVLTALPMRLVKADVLPSSGEPRGALWVEIDLADVRLQVIVTHL-----GLR 130 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + +LL W+ + ++AGD N +K + Sbjct: 131 GSERVRQATTLLG------PGWLGGIGQGDSRVILAGDLN-----AIARSAAYKLL---- 175 Query: 233 SLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + +++P +D+ + N D Sbjct: 176 AAHLKDAQLQLKAKPRPTFPSRLPLLRLDHVFVGDGI--------------NVGDCTVHS 221 Query: 290 KRL----SDHCPISIDYD 303 L SDH PI + + Sbjct: 222 SALARVASDHLPILAELE 239 >gi|322806100|emb|CBZ03667.1| endonuclease/Exonuclease/phosphatase family protein [Clostridium botulinum H04402 065] Length = 327 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 101/304 (33%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 51 DGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 108 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 109 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 165 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E N +++ +++ HL + Y + QQ +LK++I Sbjct: 166 AELDRCFLESRVSLE-NNRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 214 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 215 KEYKKGNYIIVGGDWNHLILGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 274 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N E+ S Y+ + + +DH P+ + Sbjct: 275 RTDATPYKKGENFTAVIDGFLVSDNI------EATSVKAYSME------FKNTDHNPVKM 322 Query: 301 DYDF 304 ++ Sbjct: 323 EFKL 326 >gi|326775401|ref|ZP_08234666.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus XylebKG-1] gi|326655734|gb|EGE40580.1| sphingomyelin phosphodiesterase [Streptomyces cf. griseus XylebKG-1] Length = 326 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 77/267 (28%), Gaps = 53/267 (19%) Query: 67 DIVFLQEM----GSYNAVAKVFPKNTWCIFYSTE------RLINHSKRDSNNDIHTAIAV 116 D+V +QE S + + + D I Sbjct: 75 DVVVIQEAFDNGASDALLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILS 134 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSL 173 R VR Q + D FS G V + +NG ++ V+ H +S C Sbjct: 135 RWPIVRKEQFVFKDACGGDWFSNKGFAYTV---LNVNGARVHVVGTHAQSTDPGCSAGQA 191 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFN---RKINYLGNNDDFWKTID 229 S +Q + L ++ K + V+AGDFN Y D + Sbjct: 192 AQVRS-------RQFKQLDAFLDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAP 244 Query: 230 PNDSLIRFPKEKDSRCNANKNLRN--KIPIDYF---------------VMDQNAYKFLIQ 272 + + + A + + + +D+ V+ + + + + Sbjct: 245 ETRTGHPYSFDTRDNSIAAERYPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVS 304 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPIS 299 + Y LSDH P+ Sbjct: 305 SWGKDYTYTN---------LSDHYPVI 322 >gi|229818864|ref|YP_002880390.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333] gi|229564777|gb|ACQ78628.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333] Length = 1577 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 100/314 (31%), Gaps = 62/314 (19%) Query: 38 EGVSLWKNSVKR---TTSDYT----LLRQYAKNLDADIVFLQEMGSYNAVAKVFPK---- 86 +GV++ + +R D+ + LDAD+V L E+ + A+ + + Sbjct: 531 DGVTVEEGCDQRGAWDAEDFQRQQDKIVAAINGLDADVVGLMEIENSAALGETADEALGA 590 Query: 87 -----------NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAK 134 + W S+ L +D + A+ + V P LG + Sbjct: 591 LVAALNAAAGADVWAFVPSSAELPPVELQDVITN-----AIIYRPGAVTPVGEPRALGTQ 645 Query: 135 DSFSR--AGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENT--------YSPSCS 182 + + A R + + G+ ++V+ H KS L S + Sbjct: 646 SAEGQPFANAREPIGQVFAPAGGGEDVFVVVNHFKSKGSPGPLPGDEDSGDGQGASNASR 705 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 + QA L+DW+ Q + + GDFN G D D + + + D Sbjct: 706 V--AQATALRDWVGQVAAADDAVALLGDFN----SYGQEDPLHVLYDAGYTDVEAHFDVD 759 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR-------------- 288 + R +D+ +++ A EI E Sbjct: 760 GS--SYSFGRQSGSLDHVLLNAPALARATGADIWEINSGEAVALEYSRHNYHGTLFYDAT 817 Query: 289 GKRLSDHCPISIDY 302 R SDH P+ + Sbjct: 818 AYRSSDHDPVLVGL 831 >gi|153939510|ref|YP_001391121.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|152935406|gb|ABS40904.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|295319165|gb|ADF99542.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. 230613] Length = 352 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 100/304 (32%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E N +++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRVSLE-NDRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N E+ S Y + + +DH P+ + Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI------EATSVKAYPME------FKNTDHNPVKM 347 Query: 301 DYDF 304 ++ Sbjct: 348 EFKL 351 >gi|148379821|ref|YP_001254362.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932125|ref|YP_001384119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935873|ref|YP_001387659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. Hall] gi|148289305|emb|CAL83401.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|152928169|gb|ABS33669.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931787|gb|ABS37286.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. Hall] Length = 352 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 101/304 (33%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 76 DGGKGSRSSSKEKTMENMRGITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + + K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPILKPHGTVNAG---LVNLSKYKINSATRYQYPGKESWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E N +++ +++ HL + Y + QQ +LK++I Sbjct: 191 AELDRCFLESRVSLE-NNRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYII 239 Query: 197 QKKESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEK 241 ++ + ++ GD+N + + W PND + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N E+ S Y+ + + +DH P+ + Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI------EATSVKAYSME------FKNTDHNPVKM 347 Query: 301 DYDF 304 ++ Sbjct: 348 EFKL 351 >gi|50119211|ref|YP_048378.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] gi|49609737|emb|CAG73171.1| endonuclease/Exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] Length = 392 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 25/179 (13%) Query: 59 QYAKNLDADIVFLQEMGSYNAVA----KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTA 113 + L+ADI+ E+ + + + +V K + + + Sbjct: 131 KIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPNDPRGIDVACLTRY-- 188 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDS 172 R++Q + A F +R +E+ ++ + I++L H KS Sbjct: 189 --------RIVQLRTHIFDAGKQFDPVFSRDCLEVTLDAGLKQPIYILCNHFKS--QSGQ 238 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDP 230 E Q++ + + + Q + + VI GD N ++ + W+++ P Sbjct: 239 TEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLN------EDSSNPWQSLAP 291 >gi|56479395|ref|YP_160984.1| hypothetical protein ebA6951 [Aromatoleum aromaticum EbN1] gi|56315438|emb|CAI10083.1| conserved hypothetical protein,predicted Endonuclease / exonuclease / phosphatase family [Aromatoleum aromaticum EbN1] Length = 271 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 32/214 (14%) Query: 20 VAQKVRLVSW-NINTLSEQEGVSLWKNSVKR-----TTSDYTLLRQYAKNLDADIVFLQE 73 Q L SW N++ + + + ++ R D + + + L+ D + LQE Sbjct: 2 ATQATGLASWRNLDEALGSDCLRISTYNIHRCVGADRREDASRVARVIAELNCDTIGLQE 61 Query: 74 MGSYNAVAKVFPKNTWCIF---YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 + + + S + H+ A+ R+ + V Q Sbjct: 62 VDNQP--DRRHDSMQLDFLAHAASMTAIPGHTIVRHEGVFGNALLTRRPVLGVRQHDL-- 117 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 SF+R R A+E+ +++ G+ + V+ HL LL Sbjct: 118 -----SFNRREPRGALEVDLDVEGEVVRVIVTHL--GLRPAERRFQVRKMLKLLHD---- 166 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 V+ GD N + Sbjct: 167 --------LPMDQLVVVLGDINEWLPLGRPLRWL 192 >gi|261201242|ref|XP_002627021.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] gi|239592080|gb|EEQ74661.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis SLH14081] Length = 1194 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 24/173 (13%) Query: 65 DADIVF--LQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I+ QE+ S + P N + + +N+ + + Sbjct: 645 DPSILAVGFQEIVELSPQQIMSTDPGNRLIWENAVKDTLNYYAHSKDVSEYVLLRSGQLV 704 Query: 113 AIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 A V+ + + ++ + AGN+ + ++ + +I + HL + Sbjct: 705 GTALLVFVKSELLTEIKVVEGSVKKTGMSGMAGNKGGCAIRLQYSNTRICFVTAHLAAG- 763 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGN 220 F + + + ++Q + + + +I GDFN +I G+ Sbjct: 764 FSNY--DERNRDYQTINQGLR----FQRNRSIEDHDIIIWLGDFNYRIGLPGD 810 >gi|149926631|ref|ZP_01914891.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] gi|149824560|gb|EDM83776.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] Length = 264 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 76/308 (24%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------- 75 ++R+ ++NI + + L K ++ LR+ ++AD+VFLQE+ Sbjct: 2 RLRIATYNI----HKGVMGLRKPALT-----IHALREQIHAMNADLVFLQEVQGRHDRHA 52 Query: 76 -----------------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 S +A+ + + F + +S N A+ R Sbjct: 53 GKFEHWPEGGQHEFLAQSPSAIDDLLGHASQQYFTAYGMNAVYSHGHHGN----ALLSRY 108 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + +L Q R R + V+ I + H L Sbjct: 109 EIEWMLNQDVSD-------HRLEQRGLLHCCVKTPAGPIHAMVAHF-------GLLYRSR 154 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLI 235 +QA L + + + +P V+AGDFN R++ + + + + + Sbjct: 155 V------RQASKLIEHVGTHVPAGMPLVVAGDFNDWQRRLGPI-----LQQGLKAEEVMP 203 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K + +R + R + + F + +LSDH Sbjct: 204 LDKKNRLARV-GSFPSRFPVL---------GLDRVFARGFKVHEATVLHGPAW-AKLSDH 252 Query: 296 CPISIDYD 303 P +D + Sbjct: 253 APFVVDLE 260 >gi|307752095|gb|ADN93066.1| putative DNA lyase [Arthroderma benhamiae] Length = 588 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 14/100 (14%) Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD D + P+ + + + IDY + N Sbjct: 208 GD-THDTETPPVLRDLCREFHPSRTGMYTCWNQKVNARPG---NYGSRIDYILCSDNIRS 263 Query: 269 FLIQESFS---------EILYNE-DDIKSRGKRLSDHCPI 298 + ++ + E+ Y ++ ++ SDHCP+ Sbjct: 264 WFVESNIQEGLIVCVKLELTYRSFKNLLISNEQGSDHCPV 303 >gi|291441116|ref|ZP_06580506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291344011|gb|EFE70967.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 331 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 97/320 (30%), Gaps = 58/320 (18%) Query: 4 KYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 L L +P A+ A + + ++S+N+ S E S +R Sbjct: 49 SVALPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAEPHSWAVRRPV--------MR 100 Query: 59 QYAKNLDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + ++ QE + A + + + D TA Sbjct: 101 DLLRRERPHVIGTQEGLYPQLRDIEADL----GPAYDWIGTGREGGSR-------DEFTA 149 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHL 164 + + + L+ + P + A +++ A R A + G++ VL+ HL Sbjct: 150 VLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHL 209 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++ + + +L++ + L + P V+ GDFN + + Sbjct: 210 -----DNASQYARERAAALIADRVGGLGRCV--------PVVVTGDFN----VAAHENPV 252 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + T+ + + + + P L+ + + + Sbjct: 253 YDTLLGAGLVDTWEAAAERGEPYGTFHGYRPP---VPGGPRIDWILVTPGVTVHRASVNT 309 Query: 285 IKSRGKRLSDHCPISIDYDF 304 G+ SDH P+ Sbjct: 310 FAPAGRFPSDHLPVQAALTL 329 >gi|239932761|ref|ZP_04689714.1| hypothetical protein SghaA1_31348 [Streptomyces ghanaensis ATCC 14672] Length = 302 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 97/320 (30%), Gaps = 58/320 (18%) Query: 4 KYVLALVFFLVPCTASVA-----QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 L L +P A+ A + + ++S+N+ S E S +R Sbjct: 20 SVALPLASTALPPGAASAKERPDRPLEVMSFNLRFASAAEPHSWAVRRPV--------MR 71 Query: 59 QYAKNLDADIVFLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + ++ QE + A + + + D TA Sbjct: 72 DLLRRERPHVIGTQEGLYPQLRDIEADL----GPAYDWIGTGREGGSR-------DEFTA 120 Query: 114 IAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI---NGKKIWVLDIHL 164 + + + L+ + P + A +++ A R A + G++ VL+ HL Sbjct: 121 VLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRVRFRDLRAGGREFHVLNTHL 180 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++ + + +L++ + L + P V+ GDFN + + Sbjct: 181 -----DNASQYARERAAALIADRVGGLGRCV--------PVVVTGDFN----VAAHENPV 223 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + T+ + + + + P L+ + + + Sbjct: 224 YDTLLGAGLVDTWEAAAERGEPYGTFHGYRPP---VPGGPRIDWILVTPGVTVHRASVNT 280 Query: 285 IKSRGKRLSDHCPISIDYDF 304 G+ SDH P+ Sbjct: 281 FAPAGRFPSDHLPVQAALTL 300 >gi|153213065|ref|ZP_01948603.1| exodeoxyribonuclease III [Vibrio cholerae 1587] gi|124116112|gb|EAY34932.1| exodeoxyribonuclease III [Vibrio cholerae 1587] Length = 268 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P A+ R + + NG+K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDNAEHQK-----RMIMATFADQNGQKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNSERLVVMGDIN 154 >gi|37523648|ref|NP_927025.1| hypothetical protein gll4079 [Gloeobacter violaceus PCC 7421] gi|35214653|dbj|BAC92020.1| gll4079 [Gloeobacter violaceus PCC 7421] Length = 278 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 86/284 (30%), Gaps = 49/284 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + ++++SWN+ N +R T ++ + + DIVFLQE+ Sbjct: 39 GEALKILSWNV----------AKSNHDRRFTREFLSI---LEREQPDIVFLQEVRVDAET 85 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + N+ +D++ + ++ + + + Q+ + Sbjct: 86 MRAVDLAG----MHWSVAPNY--KDTHLNAYSGLLTAARPAPIGQRVVLTHDTEPLAGTP 139 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 E + +K+ ++ HL Q + L+ I + Sbjct: 140 KASLLTEYPLPGRSRKLLAINSHL-----------INFVDLPSFGAQLRQLEA-IASRHR 187 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 P V+AGDFN + + + I L + K P+D Sbjct: 188 G--PMVLAGDFN---TWNAPRVELLEEIARRLGLKAVTF-APADRWLVKRFLLSAPLDNI 241 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + K + + R SDH PI + + Sbjct: 242 FFRGLSEK---ANATRVL---------RRTTCSDHRPILTELTW 273 >gi|288574157|ref|ZP_06392514.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569898|gb|EFC91455.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 242 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 87/282 (30%), Gaps = 70/282 (24%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-----------YNAVAK 82 LS N R+T + + Y NL DI+ L E+ A + Sbjct: 16 LSYHVPAPFSGNFR-RSTGRFKRITDYLMNLSPDIIGLVEVDGGSYRHGGNCQAETAASS 74 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + + YS R N I + + P+ R Sbjct: 75 MGGHHRFAVKYSERISRLPVLRSQGNAI-------------VSRLPPIKTDCHDLGRGMK 121 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R A+E+ ++ +HL + Q + L+D + ++ Sbjct: 122 RNALEVAYGDFS----LILVHLSLG------SRSRRH-------QIRALRDLCSARER-- 162 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGD+N ++ +T + + L C R + +D+ + Sbjct: 163 -PLILAGDYN-TLSGPEELAPLRETGMASVNELGLPTY----PCR-----RPRKELDFVL 211 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + D+ R SDH P+ D + Sbjct: 212 ISEEISTK---------GFFIPDV-----RFSDHLPLICDLE 239 >gi|229820664|ref|YP_002882190.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566577|gb|ACQ80428.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 269 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 90/307 (29%), Gaps = 68/307 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +R++++NI V+ W + + D+V LQE+ S+ Sbjct: 6 GTPLRVMTFNIKYDDAASPVAAWAPRR-------AAVAATIRAAAPDVVGLQEVQSHQLA 58 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ------QSYPLLGAK 134 + H + VR+ R+ + P + ++ Sbjct: 59 DLRADLPEYEAVGVGRDDGAAGGE------HVPLLVRRAAWRIAEWGTFWLSETPAVPSR 112 Query: 135 DSFSRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + +L ++G I V ++HL ++ + + QA Sbjct: 113 FAGTTFPRTCTWAVLEPVDGAGRAGSIGVWNVHL---------DHESTDA------QAFG 157 Query: 191 LKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L+ + ++ VP V+ GD +N + + + + Sbjct: 158 LRVVLDAVRERGDVPAVVLGD----LNAGPRTEPLAVVAGALHDAR--TRSRTAPTGPGG 211 Query: 250 NLRNKIP-------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +P ID+ ++ + + Y+ SDH Sbjct: 212 TFHDWVPDAVADTAGDDDSRIDHVLVSD---------AVGVVAYDVPVPGPGVVP-SDHL 261 Query: 297 PISIDYD 303 P+ +D Sbjct: 262 PVVVDLT 268 >gi|209523548|ref|ZP_03272102.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] gi|209495953|gb|EDZ96254.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] Length = 263 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 92/304 (30%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N RT D + + + D D++ LQE KV Sbjct: 1 MKIATWNVN--------------SIRTRQD--QVLSWLQGQDIDVLCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 S + + + +A+ R V+ P+LGA Sbjct: 38 I---DQDFPRSPFEELGYHVYIYGQKAYNGVAIFSRLNIESVIMGFTPILGADQVGELDD 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +++ I ++++++ + + S + Y Q L D++ Q Sbjct: 95 QKRVIAGVIDD----ICIVNVYIPNGSSVGSDKYEYK------LQWLNRLGDYLQQMLIK 144 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDF--WKTIDPNDSLIRFPKEKDS 243 I GDFN + + D +F ++ Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204 Query: 244 RCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A+ ID+ + Y+ I D + SDH P+ Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYQNAIACYI-------DTEPRTQPKPSDHAPV 257 Query: 299 SIDY 302 ++ Sbjct: 258 ILEI 261 >gi|73670429|ref|YP_306444.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str. Fusaro] gi|72397591|gb|AAZ71864.1| hypothetical protein Mbar_A2969 [Methanosarcina barkeri str. Fusaro] Length = 278 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 91/301 (30%), Gaps = 54/301 (17%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL-LRQYAKNLDADIVFLQEM- 74 S + +R+ ++NI + K S + + LR Y DIV +QE+ Sbjct: 14 NGSQEETLRIGAFNIQ------VFGVKKASNPKIMNTLAKVLRTY------DIVAVQEIR 61 Query: 75 GSYN----AVAKVFPKNT--WCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 S A+ KV + S SK A + RV + Sbjct: 62 DSSQTALPALIKVVNSERANYSYVVSERLGRTSSKEQ--------YAYIYDSDRVKLEGE 113 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLENTYSPSCSLL-- 184 P +K + +R+ E + + ++ +H S S + Sbjct: 114 PYTYSKPEGTDPFHRQPYIATFEDRNETLNLVLITVH-----TDPDEATEEINSLSTVLD 168 Query: 185 -SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 ++Q ++D FVI GD N +Y N ++ + D+ Sbjct: 169 STRQTCPVED----------NFVIMGDLNADGSYFDENK--ANSLSCGEYCWLIDNSMDT 216 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++I + + F + +SDH P+ ++ Sbjct: 217 TTGDTNCTYDRI----IITEDMESYFTGNSGLFRYDLKYNLTSEETNAVSDHYPVYAEFA 272 Query: 304 F 304 F Sbjct: 273 F 273 >gi|283780185|ref|YP_003370940.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283438638|gb|ADB17080.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 325 Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 94/303 (31%), Gaps = 58/303 (19%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQE 73 + +R+ ++NI E + +D + + L D++ +QE Sbjct: 45 APPPRLDATIRVATFNIQVFGEDK------------MADPAAMGVIVEILRQFDVIAIQE 92 Query: 74 MGSY--NAVAKVF------PKNTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + + + + ++ K+ + ++ + T+I V + + + Sbjct: 93 IRAVRQDLMPRLVELINAGGKHQYDYCIGPRLGNSVSKEQYAFVFDRTSIEVDRNQLYTV 152 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 LL + R A ++++H P ++ Sbjct: 153 DDPDNLLHREPLVGWFRCRAAE----PDKAFTFSLVNVH-------------TDPD--IV 193 Query: 185 SQQAQWLKD---WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + WL D + + ++ GDFN ND + + SL++ Sbjct: 194 DYELDWLDDVFFAVRDDQRREDDVIMLGDFN-------VNDKNLRQLGSVPSLVKVVAGV 246 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + N D + + F + + + + + + ++SDH P+ Sbjct: 247 PTNTRGNAQY------DNILFAGTSTTEFTGRGGVYDFMREFNLTQEQALQVSDHLPVWA 300 Query: 301 DYD 303 ++ Sbjct: 301 EFS 303 >gi|315225375|ref|ZP_07867189.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga ochracea F0287] gi|314944648|gb|EFS96683.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga ochracea F0287] Length = 348 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 75/242 (30%), Gaps = 43/242 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVS-----WNINTL--SEQEGVSLWKNSVKRTTSD 53 M R L + F L+ + +K + +N+ L + + + +D Sbjct: 1 MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTP-EGAD 59 Query: 54 -----------------YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT-----WCI 91 + + DIV L E+ + V + + I Sbjct: 60 RWTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRYNYGI 119 Query: 92 FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLV 150 H + + A+ +K + +PL KD R + + Sbjct: 120 V--------HYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSG 171 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 E++G+ I + H S ++ + L++ + + ++ K+ + GD Sbjct: 172 ELDGEMIHFIVNHWPSRLGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGD 227 Query: 211 FN 212 FN Sbjct: 228 FN 229 >gi|226949104|ref|YP_002804195.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] gi|226842810|gb|ACO85476.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] Length = 360 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 100/302 (33%), Gaps = 60/302 (19%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K ++ +FLQE+ + + + F + + ++ Sbjct: 84 DGGKGSRSSSKEKTIENMREITSFLKKDNSSFIFLQEVDTNS--TRSFRIDQYDYLKNSL 141 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRA----------- 145 + + S + + + K + V L S + Sbjct: 142 KAYSSSMALNYKTPWVPVPILKPHGTV-NAGLANLSKYKINSATRYQYPGKESWPRQLAE 200 Query: 146 -------VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 + +E N +++ +++ HL + Y + QQ +LK++I ++ Sbjct: 201 LDRCFLESRVSLE-NNRELVLINSHLSA----------YDKGGKIRKQQLSFLKNYIIKE 249 Query: 199 KESLVPFVIAGDFNR------KINYLGNNDDF-WKTIDPND--------SLIRFPKEKDS 243 + ++ GD+N + + W PND + + Sbjct: 250 YKKGNYIIVGGDWNHLIPGTDPLMFKTTEKWPDWLQKIPNDFKPEGFKWVADKNVPTTRT 309 Query: 244 RCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 K ID F++ N E+ S Y+ + + +DH P+ +++ Sbjct: 310 DATPYKKGENFTAVIDGFLVSDNI------EATSVKAYSME------FKNTDHNPVKMEF 357 Query: 303 DF 304 Sbjct: 358 KL 359 >gi|156848167|ref|XP_001646966.1| hypothetical protein Kpol_2000p76 [Vanderwaltozyma polyspora DSM 70294] gi|156117648|gb|EDO19108.1| hypothetical protein Kpol_2000p76 [Vanderwaltozyma polyspora DSM 70294] Length = 464 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 94/315 (29%), Gaps = 57/315 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWK---------NSVKRTTSDYTLLRQYAKN------LDADI 68 + +W + +S+ L +V S+ L A + D+ Sbjct: 25 LTFNTWGLKWVSKHRKKRLEAIAKTLAGENVAVPLEGSEILLPEDQAAGGPQTMIDNYDV 84 Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAV--RKKNVRVL 124 V LQE+ + K W S I R + I T +A+ + Sbjct: 85 VALQEV---------WCKEDWEYILSKCSHIFPYTRIFYSGILTGPGLAILSKIPIESTF 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELL------VEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +P+ G +F R + + + + +L+ H+ + + + Sbjct: 136 LYRFPINGRPSAFFRGDWYVGKSISVTLLKPLTPDTSPLAILNSHMHA---PYAPSGDAN 192 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNN-DDFWKTIDP 230 C + QA K++ V+ GD N K+ + D W+ + Sbjct: 193 YHCYR-ACQAWDFSKMANLYKKAGYAVVVVGDLNSKPGSLQHKLLTVETGLTDSWEQLKG 251 Query: 231 NDSLIRFP-----KEKDSRC-----NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 L ++ C N + P D +D ++ + + Sbjct: 252 KQDLSILTRVSPIEQLKIGCTTCDSTLNTWRQKCQPTDAKRLDYALIDATRLKTVNAGVR 311 Query: 281 NEDDIKSRGKRLSDH 295 ++I G SDH Sbjct: 312 FTENIPDIGS-FSDH 325 >gi|119961986|ref|YP_946639.1| 5'-nucleotidase family protein [Arthrobacter aurescens TC1] gi|119948845|gb|ABM07756.1| putative 5'-nucleotidase family protein [Arthrobacter aurescens TC1] Length = 1509 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 57/290 (19%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYN--------AVAKVFP------KNTWCIFYSTERLIN 100 + + AD+V L+E+ + A++K+ W N Sbjct: 563 SKIVAAITKSGADVVSLEEIENSAQFGKNRDDALSKLVDALNVKTPGVWDYV---RTPAN 619 Query: 101 HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKK 156 + I TA +K + +S D+ + A R+ + L + + KK Sbjct: 620 APPLSDEDMIRTAFIYKKAAAEPVGESII---HNDTVAFASARKPLAQLFKPVGGDDDKK 676 Query: 157 IWVLDIHLKSFCF------LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIA 208 + H KS D + + + +QA+ L + + S + Sbjct: 677 FIAIVNHFKSKGSAATPDDTDKGQGASNIA-RT--KQAESLLAFSKDLQASKGTDKVFLI 733 Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GDFN D I+ E + ++ +D+ + A+K Sbjct: 734 GDFN----AYAKEDP----INVLTGAGYTDLEVGTGKHSYLFGGMVGSLDHILASPAAHK 785 Query: 269 FLIQ------ESFSEI-----LYNEDDIKSRGK---RLSDHCPISIDYDF 304 + S + YN + + R SDH P+ + + Sbjct: 786 VVTGTDIWNINSVESVALEYSRYNNNVTNYYAQDEFRASDHDPVVVGLNL 835 >gi|332520994|ref|ZP_08397454.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] gi|332043524|gb|EGI79720.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 339 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 79/262 (30%), Gaps = 57/262 (21%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ K DI+ LQE Y ++ S + + Sbjct: 123 NKLVEFVKEESPDILALQE-------------------YHPRETVDFSFYKYKYEKLSGK 163 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 V+ + + YP++ + A+ V + V +IHL+S +E Sbjct: 164 KVKLG--QAIFSKYPIVNSGSIAFPNTANNAIFADVVKGNDTVRVYNIHLQSLRIDTRVE 221 Query: 175 NTYSPSC--------SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-INYLGNNDDFW 225 + Q + ++ K++ +++GDFN ++Y + Sbjct: 222 QLTTQDSEKLFDGVGQTFKMQQFQTELFLLHKRQCKYKMIVSGDFNNTALSY------VY 275 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 K I + K + + K ID+ + + + Sbjct: 276 KEIKGD----LVDTFKAAGNGFGRTYNFKFFPMRIDFILTHPD--------------FKI 317 Query: 283 DDIKSRGKRLSDHCPISIDYDF 304 + K+ SDH PI F Sbjct: 318 NSFKTYDVEFSDHYPIMTKVSF 339 >gi|241759740|ref|ZP_04757840.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114] gi|241319748|gb|EER56144.1| endonuclease/exonuclease/phosphatase [Neisseria flavescens SK114] Length = 261 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 99/285 (34%), Gaps = 47/285 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---N 78 + V + S+N+ +G+S V+ + L +D++FLQE+ Sbjct: 4 RPVTITSYNM-----HKGMSALNRKVQ-----VNRMADALGALGSDVLFLQEVQGQHLNR 53 Query: 79 AVAKVFPKN-TWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + FP + I S + ++ K H A+ + + + + Sbjct: 54 SHRTNFPDAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNL-NISVNKL 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E++ E + L +HL N P L Q + + D++ Sbjct: 113 EQRGLLH--CEVVPEGWEDPLVCLCVHL----------NLREPD--RLK-QYRAISDYVG 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +IAGDFN + + + +D N+ + ++ K +++P Sbjct: 158 RYIRPESPLIIAGDFND--WRQKSARELGRALDLNEVFVDNTGKRP------KTFPSRLP 209 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 I + + + I + K LSDH P+S+ Sbjct: 210 I-------LSLDRIYTRNLDVIDSEIHNSKDWQH-LSDHLPLSVT 246 >gi|330953392|gb|EGH53652.1| exonuclease III [Pseudomonas syringae Cit 7] Length = 270 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 54/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFS 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|169342361|ref|ZP_02863427.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] gi|169299481|gb|EDS81545.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] Length = 262 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPID 258 P++I GDFN + D+ + I N++ + K D Sbjct: 165 KTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYD 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++D L + + N DD K G SDH P+ + + Sbjct: 220 GKIID----YILYSKEYEIKSLNIDDRKIDGGYPSDHYPVICELEL 261 >gi|308805699|ref|XP_003080161.1| unnamed protein product [Ostreococcus tauri] gi|116058621|emb|CAL54328.1| unnamed protein product [Ostreococcus tauri] Length = 356 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 94/316 (29%), Gaps = 61/316 (19%) Query: 22 QKVRLVSWNINTLSE--QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GS 76 +R++SWN+ L+ + +KR + A+ + D+V LQE+ S Sbjct: 47 GTLRVMSWNLQLLAGPFSGQGGFRADLIKRARKIVQNIIVVAETV--DVVCLQEVWDDAS 104 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + IF + + +V + G ++ Sbjct: 105 RTVLRSGLATTFPYIFSPAAKCGLMVCS------------KASHVCNHFVKFTHRGGIEA 152 Query: 137 FSRAGNRRAVELLVEINGKKIWV---LDIHLKSF--CFLDSLENTYSPSCSLLSQQAQWL 191 + L + N + V L+ HL+S C + C S Sbjct: 153 RAFEKGVSTTYLRLAQNDACVRVAIILNTHLQSDYWCSG-RVARFSQLVCVRESFMRAV- 210 Query: 192 KDWITQKKESLVPFVI-----AGDFN---------RKINYLGNND-DFWKTIDPNDSLIR 236 ++ +V+ AGD N ++ + D + +D R Sbjct: 211 ------RECRGNGYVVERVLLAGDINVEHGSAEYEHMMHSIFPGAIDLMNSPLNDDDSFR 264 Query: 237 FPKEKDSRCN----ANKNLRN-----KIPIDYFV-MDQNAYKFLIQESFSEIL--YNEDD 284 + + R ++ IDY + + + + Y Sbjct: 265 LTFPVARWRHYILKCGRESRYFDLEPRVRIDYVMDLTPMGVSQGVPPRHKHVDSGYVNRA 324 Query: 285 I--KSRGKRLSDHCPI 298 + +RG+ LSDH PI Sbjct: 325 LCRDARGRALSDHFPI 340 >gi|17545927|ref|NP_519329.1| hypothetical protein RSc1208 [Ralstonia solanacearum GMI1000] gi|17428222|emb|CAD14910.1| probable metal-dependent hydrolase protein [Ralstonia solanacearum GMI1000] Length = 289 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 27/151 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA-VAKV 83 +++WNI + + R D + + A+ + + D++ LQE+ S + Sbjct: 5 ILTWNIQW---------GRGADGR--VDLSRMLAEARAMGSFDVLCLQEVTSGFGHLPGQ 53 Query: 84 FPKNTWC----------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ W L H + AIA R + V + + P Sbjct: 54 PGEDQWQELAGALGQAFTLIDGIALERHEGAQIRRFGN-AIATRLPVLHVARHALPCPAD 112 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 R A+E +V+ + V+ HL Sbjct: 113 A---GPTMPRMAIEAIVQAPFGPLRVVSTHL 140 >gi|301163088|emb|CBW22637.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 361 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 99/313 (31%), Gaps = 80/313 (25%) Query: 21 AQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A +++ ++N+++ +EQ G S + L Y K DI+ QE Sbjct: 100 ANTLKIATYNVDSFGNEQSGYSCKE------------LAAYMKEHRVDIICFQE------ 141 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 F N + ++++ + N I A L YP+ ++ Sbjct: 142 ----FAGNRY---FTSDSIRNAFADWQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYP 194 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSF-----------------------CFLDSLENT 176 ++ + ++G+ + V + HL++ L Sbjct: 195 DSRNCSMWCDLNVDGQTVRVFNNHLQTTEVSQNKRRLERELAKNELTGREEAVAKQLLEG 254 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + + + QA+ L+ I + P ++ GDFN + + T+ ++ Sbjct: 255 LNENFRKRAAQAKTLEQLIRT---TPYPILVCGDFN-----SLPSSYTYSTVKGDN---- 302 Query: 237 FPKEKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ C + IDY + F + Y D+ Sbjct: 303 -LQDGFQTCGHGYMYTFRYFKRLLRIDYIF---------HSKEFKGVDYYSPDLDLC--- 349 Query: 292 LSDHCPISIDYDF 304 SDH P+ ++ Sbjct: 350 -SDHNPVVMEVKM 361 >gi|169634777|ref|YP_001708513.1| catabolite repression control protein [Acinetobacter baumannii SDF] gi|169794343|ref|YP_001712136.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|260557895|ref|ZP_05830108.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] gi|169147270|emb|CAM85129.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|169153569|emb|CAP02744.1| catabolite repression control protein [Acinetobacter baumannii] gi|260408686|gb|EEX01991.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 38 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 86 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 87 AIYSRLPFVSIKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 139 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 140 EAQARKDL---FLGEYAKILKQW----RDENKSIIICGDYN--IVHKRIDIKNWSG---- 186 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 187 -------NQKSSGCLPHE----RAWLDHI 204 >gi|168704312|ref|ZP_02736589.1| endonuclease/exonuclease/phosphatase family protein [Gemmata obscuriglobus UQM 2246] Length = 295 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 37/212 (17%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT--TSDYTLLRQYAKNLDADIVFL 71 V + S A + VS+NI G +++ R + + + + D VFL Sbjct: 42 VAASRSPAGEATFVSYNIAKGFAHRGGLKFES---REFVLAKLRRMAEVIRAEQPDAVFL 98 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---------AVRKKNVR 122 E A+ ++ P N + Y + + + + A+ + Sbjct: 99 SE-----ALTELAPCNVDQVEYLARECGLP-HVAAGENYNVGLPFARVAGGNAILSRTPL 152 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + L G K + NRRA+ + E G+ + + +H DS + + + Sbjct: 153 TPVANIDLAGRKPFWVTGNNRRALFVSAEFGGRPVLMAALH------NDSFDMRNNLT-- 204 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 QAQ L D++ + P ++AGDFN + Sbjct: 205 ----QAQQLLDFVGDR-----PAILAGDFNNR 227 >gi|327287972|ref|XP_003228702.1| PREDICTED: LOW QUALITY PROTEIN: deoxyribonuclease-1-like [Anolis carolinensis] Length = 307 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 7/103 (6%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV- 261 ++ GDFN +++ D + + + + + D V Sbjct: 179 QDVLLLGDFNAGCSFVRAQDWAHIRLRTDPAFQWLIPDTADTTAGRSDCAY----DRIVA 234 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + + L+ S + E S L SDH P+ + Sbjct: 235 VGAHLQGGLLPGSAQVNNFQETFRLSYKDALAVSDHYPVEVTL 277 >gi|221221062|gb|ACM09192.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 331 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFV 261 +I GDFN +Y+ D I ++ + D+ N + + D V Sbjct: 163 DHIMILGDFNADGSYVTKGDMTNIRIRSDEKFHWVIGDDVDTTANTSNDHTY----DRIV 218 Query: 262 M-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 M + ++ S +++ S+ L SDH P+ ++ Sbjct: 219 MYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 263 >gi|170764286|ref|ZP_02640401.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] gi|170713790|gb|EDT25972.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] Length = 262 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPID 258 P++I GDFN + D+ + I N++ + K D Sbjct: 165 KTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYD 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++D L + + N DD K G SDH P+ + + Sbjct: 220 GRIID----YILYSKEYEIKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|37680518|ref|NP_935127.1| exonuclease III [Vibrio vulnificus YJ016] gi|37199266|dbj|BAC95098.1| exodeoxyribonuclease III [Vibrio vulnificus YJ016] Length = 268 Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 93/307 (30%), Gaps = 76/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L+ D++ LQE+ KV Sbjct: 1 MKIVSFNINGLRAR----------------LHQLQALIDKHQPDVIGLQEI-------KV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRAGN 142 + + + H +A+ K+ +Q+ +P + Sbjct: 38 HDEA---FPIEDVEAMGYKVYFHGQKAHYGVALLCKQEPIEIQKGFPTDNDEHQK----- 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-QWLKDWITQKKES 201 R + ++ G+K+ VL+ + D++ + +Q Q L ++T +++ Sbjct: 90 RMIIGTFLDEKGEKVTVLNGYFPQG---DNIAHETKFP---YKRQFYQDLMGYLTTHRDN 143 Query: 202 LVPFVIAGDFN-----RKINYLGNNDDFWKTIDP-----------NDSLIRFPKEKDSRC 245 V+ GD N I N W L ++ + Sbjct: 144 GEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDWGLEDTFRKL 203 Query: 246 NANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + + + + ID + + + + D ++ Sbjct: 204 HPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLATKCRES-------DIDYELRGIEK 256 Query: 292 LSDHCPI 298 SDH PI Sbjct: 257 PSDHAPI 263 >gi|107022880|ref|YP_621207.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116686877|ref|YP_840124.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105893069|gb|ABF76234.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116652592|gb|ABK13231.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 263 Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 47/198 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI G W + + LDAD++ LQE+ Sbjct: 26 GRDLRIATYNI-----HGGYGAW------SARAVDRIAAVIDELDADVIALQEVP----- 69 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKD 135 ++ H + + + R N + + D Sbjct: 70 ---LGGTR------APDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTLD 120 Query: 136 S-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F R A++ ++ + I V+ HL L + + Q Q L Sbjct: 121 LSFHPREPRGALDADIDCSTGPIRVVATHL-------GLSASERSA------QVQRLLAA 167 Query: 195 ITQKKESLVPFVIAGDFN 212 +P ++ GD N Sbjct: 168 FDT---GAMPVILLGDIN 182 >gi|288929073|ref|ZP_06422919.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330057|gb|EFC68642.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 313 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 95/332 (28%), Gaps = 57/332 (17%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 + L L L A+ Q + L S+NI + KR L + Sbjct: 8 NKARSLLLGVVLCMAFAAFGQTLVLGSYNIRY-RNDGDEAKGHLWAKRCQVIADQLNYH- 65 Query: 62 KNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D QE+ G + + + P + + + + I R+ Sbjct: 66 ---HPDAFGAQEVLKGQLDDLLRALP--DYDYVGVGRDDGHEAGE------YAPIFYRRD 114 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDSLENTYS 178 + L Y L + G A + ++ +S FL +T Sbjct: 115 RLDKLSDGYFWLSPTYTTPSLGWDAACIRICTWAKFRVR------ESGEVFLFFNLHTDH 168 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + A+ + I +P V+ GDFN + D+ + N L Sbjct: 169 VGVKARRESAKLVMKAIDGLGGKDMPVVLTGDFN-----VDQTDETYAIFTANARLNDAY 223 Query: 239 KEKDSRCNANKNL-------RNKIPIDYFVMDQN-------------------AYKFLIQ 272 R N + ID+ + A Q Sbjct: 224 VVAKHRFAENGTFNSFDPTLKTTSRIDHVFVSPRFAVARYGVLPNFYWTEEPAAKSQKGQ 283 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ +I + + I++ SDH P+ ++ + Sbjct: 284 DAPQQIDFKQHRIRTA----SDHYPVFVEVNL 311 >gi|254286781|ref|ZP_04961735.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] gi|150423208|gb|EDN15155.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] Length = 268 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + NG+K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDNEEHQK-----RMIMATFADQNGQKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHKTKFP---YKRQFYRDLMTYLREHRSNSERLVVMGDIN 154 >gi|115451797|ref|NP_001049499.1| Os03g0238300 [Oryza sativa Japonica Group] gi|108707070|gb|ABF94865.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2, putative, expressed [Oryza sativa Japonica Group] gi|113547970|dbj|BAF11413.1| Os03g0238300 [Oryza sativa Japonica Group] gi|215765312|dbj|BAG87009.1| unnamed protein product [Oryza sativa Japonica Group] gi|215768554|dbj|BAH00783.1| unnamed protein product [Oryza sativa Japonica Group] Length = 495 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 29/210 (13%) Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 VR R ++++ GN+ AV + ++ V HL S + Sbjct: 235 VRADLARFVRRASVSCVGCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDEAH 294 Query: 176 TYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------W 225 + + +LS+ + L + QK ++ GD N +I+ W Sbjct: 295 RNADATEILSRTTFPRGHSLN--LPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDW 352 Query: 226 KTIDPNDSLIRFPKEKDSRCN----------ANKNLRNKIPIDYFVMDQ-------NAYK 268 KT+ ND L + + + Y A Sbjct: 353 KTLLENDQLRSEVESEGGAFHGWNEGAIAFSPTYKYYPNSDTYYGCASHGRKGEKRRAPA 412 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + + + RLSDH P+ Sbjct: 413 WCDRILWRGAGLKQKRYDRCESRLSDHRPV 442 >gi|269127062|ref|YP_003300432.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312020|gb|ACY98394.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 644 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 89/305 (29%), Gaps = 66/305 (21%) Query: 5 YVLALVFFLVPCTASVAQK-------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 VL L T A+ +R++++NI+ D L Sbjct: 393 LVLLAGTLLFTVTNPKAEPRAADPARLRVLTYNIHH-----------GVNAAGKLDLDAL 441 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + AD+V LQE+G + V+ ++ S ++ + + A+ Sbjct: 442 AAVIERQRADVVLLQEVGRGSLVS---GTTDVGVWLSRRLGMHLIWGPAADGQF-GNAI- 496 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 + RVL + D R V +++ G+ ++V HL + Sbjct: 497 LTSRRVLSSGSARMPKGDWSQ---IRGYVWARLDVGGRPVYVWSTHLDGGADRAAARQRE 553 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + L+ W P +I GD N L Sbjct: 554 IAA---------LLRAW------GGAPRTIIGGDMN-----SEPGSAEMSRFLDGTGLRA 593 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + +D+ + + +++++ + + SDH Sbjct: 594 SALGDYAPTTPAGK-----KVDWILGTDD------------LVFSDHGV--HPSKTSDHY 634 Query: 297 PISID 301 P+++ Sbjct: 635 PVAVT 639 >gi|257455440|ref|ZP_05620675.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] gi|257447402|gb|EEV22410.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] Length = 335 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 93/299 (31%), Gaps = 53/299 (17%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA---VAKVFPKNTWCI---FYSTERLI 99 + K+ L + L ADI+ QE+ A + + N + + S + Sbjct: 30 TPKQYQQKINALAPIFRQLQADIIGCQEIWDEQALIDLCRAAGLNDYHVTVPLASNQPDS 89 Query: 100 N-HSKRDSNNDIHTAIAVR---------KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149 R + + R + + P +G F+R + L Sbjct: 90 PLTQGRGAVGTPSVGLVSRFEIINTQLLTQMPAIALLEVPDVGLYQQFNRPPLIADIRL- 148 Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTY------------------SPSCSLLSQQAQWL 191 NG + V+ HLKS + LEN C ++ A Sbjct: 149 --PNGMLVTVIVAHLKSK-RPEFLENAQGEPLEDRNDPLIRVRAKLRSLCMRAAEAAGIR 205 Query: 192 KDWITQKKESLVPFVIAGDFNRKI-----NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + I + + P ++ GD N + L + + + D ++ SR + Sbjct: 206 QVVIEKLSHNNHPLILLGDMNDVMQSVTCQLLSESGEVFYDKSMRDIVLYDASTVQSRMH 265 Query: 247 ANKNLRN-------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K++ +D ++ + KF I E +N+ +R +DH Sbjct: 266 WLKDVAYTHIHQGMPEVLDQILVSEQFLADSKFNIGEVLQVDYFNDHLKFIVEQRPTDH 324 >gi|300715934|ref|YP_003740737.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661] gi|299061770|emb|CAX58886.1| conserved uncharacterized protein YbhP [Erwinia billingiae Eb661] Length = 253 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 80/256 (31%), Gaps = 43/256 (16%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKN-----TWCIFYSTERLINHSKRDSNNDIH 111 LR + ADIVFLQE+ A+ ++ +N + + + N N Sbjct: 33 LRDAVRATAADIVFLQEVMGAPAINQLKVENWPDTPHYEFL--ADTMWNDYAYGRNAVYP 90 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSFC 168 N + + +D +R + ++ + + + + + +HL Sbjct: 91 EG---HHGNAILSRYPILKFENRDISVEGTEKRGLLHCQVAIPSHEQPLHAICVHL---- 143 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 L++ + + Q + L + + P V+AGDFN D + Sbjct: 144 ---GLKDAHRHA------QLKLLCELVNSLPA-DAPVVVAGDFN---------DWQ-QKA 183 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + +E SR +D+ + I Sbjct: 184 NAVLKKGAALEEVFSRKFGRPARTFPARFPLLRLDRIYVRNAGISHPQTIP------LRP 237 Query: 289 GKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 238 WSHLSDHAPLAVEIHL 253 >gi|297198294|ref|ZP_06915691.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|297147051|gb|EFH28465.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 377 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 89/298 (29%), Gaps = 65/298 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++R+++WN+ K R + D D+V LQE A Sbjct: 123 HRLRVMTWNL-------WFGGTKVHDHRAKQ-----LKVITETDVDVVGLQETYGSAA-- 168 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 E + I R VL P +G + AG Sbjct: 169 -------------EELAEALGWHHHRAGTNLGIISRFPITAVL--GDPDVG---FYGAAG 210 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--KK 199 R AVE +++ V HL + P L+ + L + Sbjct: 211 ARIAVE------EREVEVWTAHLD---YERYGPYASEP----LAHEEVRLAQMRDTLHRI 257 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND-------------SLIRFPKEKDSRCN 246 P V+ GDFN ++L D W + +R P S + Sbjct: 258 GDSAPVVLVGDFNCP-SHLDWPDVEWPVTKAAEEAGFGDSFRQARPDAVRDPGHTWSPVH 316 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 A+ +++ ID FV+ + + S+ D++ SDH + + Sbjct: 317 AHPEPQDR--ID-FVLHRGLRVLDSRTCVSDTPRTWPDVEDNDW-PSDHAAVITTFSL 370 >gi|160871859|ref|ZP_02061991.1| exodeoxyribonuclease III [Rickettsiella grylli] gi|159120658|gb|EDP45996.1| exodeoxyribonuclease III [Rickettsiella grylli] Length = 254 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 87/268 (32%), Gaps = 68/268 (25%) Query: 65 DADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 DAD+V LQE + VF + F+ E+ ++ +A+ + Sbjct: 27 DADVVCLQETKAQKHQLNDSVFIQGYEAYFFDAEKKG-----------YSGVAIYSRLK- 74 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 P ++ + + + ++ + +++ S S E+ Sbjct: 75 ------PNNVTTGLGWACADKEGRYIQLHFS--QLSIASLYMPSG---SSGESRQRLKFQ 123 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----RF 237 L LK Q++++ F+I GD+N I + + W+ N + Sbjct: 124 FLDSYLPILK---KQRQQAG-DFIICGDWN--IAHKPIDLKNWRCNQKNSGFLPQERAWL 177 Query: 238 PK--------EKDSRCNANKNLRNK-------------IPIDYFVMDQNAYKFLIQESFS 276 + + N + IDY ++ + + S Sbjct: 178 TQVLGPIGYVDAFRALNPQPDHYTWWSHRGRAWENNVGWRIDYQIVSKEIKNKIK----S 233 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++Y + R SDH P+ IDY+F Sbjct: 234 AMIYKDQ-------RFSDHAPLIIDYNF 254 >gi|261819592|ref|YP_003257698.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] gi|261603605|gb|ACX86091.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] Length = 381 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 25/179 (13%) Query: 59 QYAKNLDADIVFLQEMGSYNAVA----KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTA 113 + L+ADI+ E+ + + + +V K + + + Sbjct: 120 KIINLLNADILCAVEVENMDVLRDFNSQVLGKKKFSQFVMIDSPNDPRGIDVACLTRY-- 177 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDS 172 R+ Q + A F +R +E+ ++ + I++L H KS Sbjct: 178 --------RIAQLRTHIFDAGKQFDPVFSRDCLEVTLDAGLKQPIYILCNHFKS--QSGQ 227 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPF-VIAGDFNRKINYLGNNDDFWKTIDP 230 E Q++ + + + Q + + VI GD N ++ + W+++ P Sbjct: 228 TEQERQRGAQKRRDQSERVAEIVQQTYDLKKDYVVILGDLN------EDSSNPWQSLAP 280 >gi|182434884|ref|YP_001822603.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463400|dbj|BAG17920.1| putative phospholipase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 326 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 77/265 (29%), Gaps = 49/265 (18%) Query: 67 DIVFLQEM----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----AIAVRK 118 D+V +QE S + + + T + + Sbjct: 75 DVVVIQEAFDNGASDALLRNSASPYPYQTPVVGRSKSGWDATGGSYAAATPEDGGVTILS 134 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLEN 175 K V ++ + A + A + + +NG ++ V+ H +S C Sbjct: 135 KWPIVRKEQFVFKDACGGDWFSNKGFAYTV-LNVNGARVHVVGTHAQSTDPGCSAGQAAQ 193 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFN---RKINYLGNNDDFWKTIDPN 231 S +Q + L ++ K + V+AGDFN Y D + Sbjct: 194 VRS-------RQFKQLDAFLDAKNIPASEQVVVAGDFNVDGHAAEYASFLADAGLSAPET 246 Query: 232 DSLIRFPKEKDSRCNANKNLRN--KIPIDYF---------------VMDQNAYKFLIQES 274 + + + A + + + +D+ V+ + + + + Sbjct: 247 RTGHPYSFDTRDNSIAAERYPDDPREDLDHVLHRTGHARPAGWKNEVIKEESAPWTVSSW 306 Query: 275 FSEILYNEDDIKSRGKRLSDHCPIS 299 + Y LSDH P+ Sbjct: 307 GKDYTYTN---------LSDHYPVI 322 >gi|148272370|ref|YP_001221931.1| putative membrane protein with hydrolase activity [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830300|emb|CAN01234.1| putative membrane protein with hydrolase activity [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 345 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 21/119 (17%) Query: 193 DWITQKKESLVPFVIAGDFNRKINY-------LGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 W+ Q+ + +IAGDFN +++ D + R Sbjct: 237 AWLGQRCDEG-NVIIAGDFNATLDHMSRYGGAPTERDQV-TDLGKCVDAGRASGNGAVGT 294 Query: 246 NANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 PID+ + + + F ++ R SDH P+ Sbjct: 295 WPTGLPALLGTPIDHIMATPG---WAV-TGFRV-------VEDRDGAGSDHRPVIAQLT 342 >gi|184159856|ref|YP_001848195.1| exonuclease III [Acinetobacter baumannii ACICU] gi|213159082|ref|YP_002321080.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|215481899|ref|YP_002324081.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|239503819|ref|ZP_04663129.1| catabolite repression control protein [Acinetobacter baumannii AB900] gi|301347005|ref|ZP_07227746.1| catabolite repression control protein [Acinetobacter baumannii AB056] gi|301510728|ref|ZP_07235965.1| catabolite repression control protein [Acinetobacter baumannii AB058] gi|301597923|ref|ZP_07242931.1| catabolite repression control protein [Acinetobacter baumannii AB059] gi|332850148|ref|ZP_08432535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150] gi|332868976|ref|ZP_08438535.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113] gi|332872852|ref|ZP_08440817.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059] gi|183211450|gb|ACC58848.1| Exonuclease III [Acinetobacter baumannii ACICU] gi|193078676|gb|ABO13730.2| catabolite repression control protein [Acinetobacter baumannii ATCC 17978] gi|213058242|gb|ACJ43144.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|213986663|gb|ACJ56962.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|322509770|gb|ADX05224.1| exonuclease III [Acinetobacter baumannii 1656-2] gi|323519783|gb|ADX94164.1| catabolite repression control protein [Acinetobacter baumannii TCDC-AB0715] gi|332730997|gb|EGJ62303.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013150] gi|332733019|gb|EGJ64221.1| exodeoxyribonuclease III [Acinetobacter baumannii 6013113] gi|332739013|gb|EGJ69875.1| exodeoxyribonuclease III [Acinetobacter baumannii 6014059] Length = 274 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 47/209 (22%) Query: 57 LRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L ++ + DAD+V +QE + K P+ + ER + Sbjct: 32 LLEWLEQSDADVVCMQESRITHEQWTEKFRPEGWHTHLFPAERAG-----------YAGT 80 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN---GKKIWVLDIHLKSFCFLD 171 A+ + V + DS R + E + + + ++L S + Sbjct: 81 AIYSRLPFVSIKDGLGFELADSQGRF-------ISAEFDLGLSHPVHIASLYLPSGSSGE 133 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + L + A+ LK W ++ +I GD+N I + + W Sbjct: 134 EAQARKDL---FLGEYAKILKQW----RDENKSIIICGDYN--IVHKRIDIKNWSG---- 180 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +K S C ++ + +D+ Sbjct: 181 -------NQKSSGCLPHE----RAWLDHI 198 >gi|57157233|dbj|BAD83646.1| deoxyribonuclease I [Pagrus major] Length = 281 Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 19/106 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRNKIPID 258 V+ GDFN NY+ +D + + S + + C D Sbjct: 184 VLLGDFNTDCNYVSGSDWQHIRLFTDKSFRWLIGNEVDSTVSQTTNCA----------YD 233 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V+ + K ++ S + D S L SDH P+ ++ Sbjct: 234 RIVVTTDMLKGVLLGSAQVYNFMTDLKLSHSLTLAVSDHYPVEVEL 279 >gi|229194746|ref|ZP_04321537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588757|gb|EEK46784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 263 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L + +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVNRL----MEHVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ +D+ ++ + + ++ + ID + Sbjct: 186 EYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] Length = 341 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 104/345 (30%), Gaps = 70/345 (20%) Query: 24 VRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ ++N+ + + +++V R L + LDAD V + E Sbjct: 1 MRIATYNVEWFAGLFDQEDRLYNDAGWSARHNVTRAQQT-RALGTVFRALDADAVMIIEA 59 Query: 75 GSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + V + + ++ IA+ ++ P Sbjct: 60 PDQSGKQGTVAALEGFAAHFGLRTSAAIMGFANHTQQE--IALLYDPAKITATHTPGGPV 117 Query: 134 KDSFS-RAGNRRAVELLVEINGKKIWVLDI-----------------------HLKSFCF 169 D+ R R L ++++ L + HLKS Sbjct: 118 TDANGARGAPRFDGILRIDLDIDAREDLVVFSKPPLELSIETASGFSFQMIGAHLKS--K 175 Query: 170 LDSLENTYSPSCSL-------LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 + + + QA WL+ I + E P ++ GD N D Sbjct: 176 APHGAKNEADALRIGIANRRKQLAQAIWLRGRIDEHLERGSPLMVMGDLNDGPGLDAFED 235 Query: 223 DF--------------WKTIDPNDSLIRFPKE----KDSRCNANKNLRN-KIPIDYFVMD 263 F + DP+ + + SR R + +DY ++ Sbjct: 236 FFGRSSVEIVLGHRGAFALTDPHATRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMVS 295 Query: 264 Q----NAYKFLIQESFSEIL-YNEDDIKSRGKRLSDHCPISIDYD 303 N ++ I + + + D++ SDH P++I++D Sbjct: 296 PQFTDNNARWRIWHPLDDPECWADADLRDALVTASDHFPVTIEFD 340 >gi|206562314|ref|YP_002233077.1| putative extracellular endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198038354|emb|CAR54309.1| putative extracellular endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 604 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 108/320 (33%), Gaps = 52/320 (16%) Query: 24 VRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DADIVFLQEM- 74 +R+ S+N +N + + + R + ++ + DAD++ L E+ Sbjct: 293 LRVASFNVLNYFNGNGLGGGFDDPNNRGAKTFQEFQRQEAKIVSALKAIDADVIGLMEIQ 352 Query: 75 ----GSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 G +AV ++ N W + + + R + I A+A+ + +V Sbjct: 353 NNGYGELSAVRQLAAKLGNHWRV------VDPGTSRLGGDAI--AVALIYDSRKVEPVGR 404 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT----YSPSC--S 182 A D +R ++ L V N + + V HLKS D+ + C Sbjct: 405 AATLAIDDKNRQPLAQSFRL-VNGNKQALTVAVNHLKSKNCPDAANDDLDQGDGQGCWNP 463 Query: 183 LLSQQAQWLKDWI--TQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTIDPND 232 ++ A + DW+ ++ GDFN R + G + + I N Sbjct: 464 TRTRAAAKVADWLAGNPTGVKSQGVLLIGDFNSYTYEDPIRALESRGYRNLVARWIGANA 523 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPID-----YFVMDQN---AYKFLIQESFSEILYNEDD 284 + E +A L + + D+ Y + + + + D Sbjct: 524 YSYVYNGEAGYLDHALATLPLASHVKAVHEWHINADEPLALQYTLAYKSAEQQKTFYAAD 583 Query: 285 IKSRGKRLSDHCPISIDYDF 304 R SDH P+ ID Sbjct: 584 ----AYRSSDHDPVLIDIAL 599 >gi|170693952|ref|ZP_02885108.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170141024|gb|EDT09196.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 265 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQRWVQSTHADAYFLQE-----AMARRMPSP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAV-----------------RKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGAPVADPLNDVWHCQATEIAQALQLEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI K+ P V+AGDFN Sbjct: 170 WIAHWI-AKEAPDGPLVLAGDFN 191 >gi|126738233|ref|ZP_01753954.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6] gi|126720730|gb|EBA17435.1| hypothetical protein RSK20926_06852 [Roseobacter sp. SK209-2-6] Length = 357 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + L P A + VR+ ++N S + L ++ + T + Q + Sbjct: 11 PLLFLLGLIQSPSPAGAGEGVRIATYNTE-FSRRGPGLLLRDIERGTDPQVKAVLQVIQE 69 Query: 64 LDADIVFLQEMG 75 + DI+ LQ + Sbjct: 70 IQPDILLLQGVD 81 >gi|94957776|gb|ABF47138.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus neoformans var. grubii] Length = 529 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 66/192 (34%), Gaps = 26/192 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST-ERLINHSKRDSNNDIHT 112 + +Y + + DIV LQE+ + K + + +R + S+ + + Sbjct: 35 IHAIAEYLASSNYDIVCLQEL----WIYK-----DYEVVREEVQRNLPFSRFFHTGALGS 85 Query: 113 AIAVRKKNVRVLQQSYP-LLGAKDSFSRAGNRR-----AVELLVEINGKKIWVLDIHLKS 166 +A+ + + + P L + + AG+ A +++ ++ + + H+ + Sbjct: 86 GLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPVLGEVEIWNTHMHA 145 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-----INYLGNN 221 + + Q+ L + + + GDFN + I + ++ Sbjct: 146 ---AGEHPPDTRQAHRI--AQSWQLANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMRDH 200 Query: 222 DDFWKTIDPNDS 233 + D Sbjct: 201 AQLMDSFDQVHP 212 >gi|319442381|ref|ZP_07991537.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702] Length = 259 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 69/222 (31%), Gaps = 46/222 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN RT +R + D D++ LQE +A Sbjct: 1 MRVATWNIN--------------SVRTRE--ARVRDFLSRSDVDVLCLQETKCTDAQFPD 44 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 F + + +AV R V + G + Sbjct: 45 FSDTGY------------EQAHHGLGSFNGVAVLSRVGIDEVT-TDFGQPGFDKDPAAPQ 91 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + A L V G ++W L + N S + + +L + ++ Sbjct: 92 EQEARALGVTCGGVRVWSLYV-----------PNGREISDRHYTYKLDFLDALASYAEQE 140 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 P V+ GDFN +DD W P+E+D+ Sbjct: 141 HRPTVVTGDFN----ITPTDDDVWDPSFFVGKTHVTPRERDA 178 >gi|301311515|ref|ZP_07217442.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300830601|gb|EFK61244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 344 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 106/361 (29%), Gaps = 81/361 (22%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY 54 ++ ++ L+FF P + A +++++N+ ++ + L + T S Y Sbjct: 1 MKIFMFFLLFFASPPLFAQA-TFKVMTYNVENFFDTRDNPTKNDDEFLPSGNRYWTQSRY 59 Query: 55 -TLLRQYAKNLDAD-------IVFLQEMGSYNAVAKVFPKN-------TWCIFYSTERLI 99 L+Q AK + A ++ L E+ + + ++ + + + I S + Sbjct: 60 YHKLQQIAKVISAAGEWSTPALIALCEVENDSVLSHLTRRTPLRWQDYRYIITQSPDPRG 119 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 + D +R +++ + +D + G + V Sbjct: 120 INIALLYQRDQF--FYLRHESIPIRFSGNKHKLTRDILHV----YGKIIT----GDTLDV 169 Query: 160 LDIHLKSFCFLDSLENTYS-PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H S + + L + L +I GDFN Sbjct: 170 FVCHFPSRYGGEKESEKDRFDAARTLRGSSDSL-----LLIREKPQILIMGDFN-----D 219 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDS-RCN---------------ANKNLRNKIPIDYFVM 262 D I + + DS C ++K +D ++ Sbjct: 220 TPQDRSISEIFAAQAFPENTQITDSTSCTYYNLFASPYITQFPGSHKYQGEWSQLDQIIV 279 Query: 263 DQN-----AYKFLIQESFS----------------EILYNEDDIKSRGKRLSDHCPISID 301 +++ + +I ES + SDH P+ ID Sbjct: 280 NRDLITQESSMHIIPESIHIFAPDFLLTKDKTWRGVRPFRTYYGFKYEGGFSDHLPLVID 339 Query: 302 Y 302 + Sbjct: 340 F 340 >gi|319902825|ref|YP_004162553.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319417856|gb|ADV44967.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 345 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 95/337 (28%), Gaps = 71/337 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL---------RQYAKNLD-------- 65 R++S+N+ L + + SL +DY L +Y K LD Sbjct: 23 TFRVMSYNVENLFDCKHDSL--------KNDYEFLPDAVRHWNYAKYRKKLDNIARVIVA 74 Query: 66 ------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +V + E+ + + + + + + + ++ I A+ ++ Sbjct: 75 AGEWTPPALVAMCEIENDSVMRDL---TQYSVLRESGYRYVMTQSSDERGIDVALLYQRN 131 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-TYS 178 ++L L+ + SR + +N + V +H S Sbjct: 132 CFKLLSSQSLLVAKPQNDSRPTRDILHVCGLLLNKDTLDVFAVHFPSRSGGAKESEIYRI 191 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 + L A L + +I GDFN + P S P Sbjct: 192 TAAKRLKAAADSLY-----RIRQHAQILILGDFNDYPTDKSIRQILQAEVPPPASGTLHP 246 Query: 239 KE------KDSRCNAN----KNLRNKIPIDYFVMDQNAY--------KFLIQESFSEILY 280 ++ + C + K +D+ ++ N + F Sbjct: 247 RKLYHLLANKAICQKDFGSYKYRGEWGLLDHIIVSGNLLDPNYPLYTSEAKADVFQRPFL 306 Query: 281 NEDDIK-------------SRGKRLSDHCPISIDYDF 304 +D K SDH P+ ++ Sbjct: 307 LTEDKKYGGKQPFRTYYGMKYQAGYSDHLPVWTEFRL 343 >gi|84625383|ref|YP_452755.1| hypothetical protein XOO_3726 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369323|dbj|BAE70481.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 319 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 99/295 (33%), Gaps = 33/295 (11%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +LAL L AS +R++S+N+ V + + KR T T + K Sbjct: 48 ILALCITLPAFAASAPAPLRVMSFNVR-------VPMDSDGDKRWTVRRTSMVALIKQAH 100 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+ QE+ A + F R + A++V + L Sbjct: 101 PDVFGTQELVQEQAQYLASHLPAYRWFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLS 160 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 ++ P + S++ R L E + ++ ++L+ HL D E + Sbjct: 161 ET-PEIPGSSSWNTDLPRMVTWALFERRNDKRRFYLLNTHLP---HRDQDEAAREHVARV 216 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + L +P V+ GDFN + G + + + P+ + Sbjct: 217 ILSRIATLPA--------DIPVVVTGDFNSDPDQ-GTYRTLTAVLGDARAHVAKPQGPEK 267 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ID +++ + ++ D +S G SDH P+ Sbjct: 268 TFQNFTTQPTR-RID----------WILFRGLTPTRFSTLDARSGGILPSDHYPV 311 >gi|302664446|ref|XP_003023853.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517] gi|291187871|gb|EFE43235.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517] Length = 588 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 14/100 (14%) Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD D + P+ + + + IDY + N Sbjct: 208 GD-THDTESPPVLRDLCREFHPSRTGMYTCWNQKVNARPG---NYGSRIDYILCSDNIRS 263 Query: 269 FLIQESFSE----------ILYNEDDIKSRGKRLSDHCPI 298 + ++ + E I + +++ ++ SDHCP+ Sbjct: 264 WFVESNIQEGLIVCVKFGLISPSFNNLLIPNEQGSDHCPV 303 >gi|187922391|ref|YP_001894033.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans PsJN] gi|187713585|gb|ACD14809.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans PsJN] Length = 265 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQRWVQSTHADAYFLQE-----AMARRMPSP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGSPLADPLSDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI ++ P V+AGDFN Sbjct: 170 WIAHWIAKEAPEG-PLVLAGDFN 191 >gi|312958184|ref|ZP_07772707.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] gi|311287615|gb|EFQ66173.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] Length = 292 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 95/311 (30%), Gaps = 80/311 (25%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWK--------NSVKRTTSDYTLLRQYAKNL 64 L ++RL+S+NI + E + RT++ L++ L Sbjct: 22 LESTGLPADSRLRLLSFNIQVGNSTEKYRHYLTRGWQHVLPHKGRTSN----LQKIGDLL 77 Query: 65 DA-DIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 + D+V LQE + +A++ W + R + + SN Sbjct: 78 NDFDLVALQEADGGSMRSGYINQVEHLAQLGAFPYW--YQQLNRNLGRLAQHSN------ 129 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V + + +PL G R A+ + + + V+ +HL Sbjct: 130 -GVLSRLKPTAIEDHPLPGP-------KGRGAILVRFGEGPEALVVVMMHLALGG----- 176 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + Q ++ + + V+ GD N L N Sbjct: 177 --------RTRNLQL----AYVRELIGNYKHQVLMGDMNTHATDLLQNSPL-------RD 217 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 L + ++ + R + +D+ ++ + ++ +S Sbjct: 218 LGLLAPQVEATF---PSWRPQRCLDHILLSP--------------TLTLESVQVLAHPIS 260 Query: 294 DHCPISIDYDF 304 DH P++++ Sbjct: 261 DHLPVAVEIRL 271 >gi|241668560|ref|ZP_04756138.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877094|ref|ZP_05249804.1| exodeoxyribonuclease III [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843115|gb|EET21529.1| exodeoxyribonuclease III [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 262 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 82/273 (30%), Gaps = 65/273 (23%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 D D + +QE K + E+ D AV+K Sbjct: 24 FATQDVDFLCIQE-----------TKAQFHQLEKDEQHFPDGYYYDFKD-----AVKKGY 67 Query: 120 -NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + PL K+ + + + I ++L S D + Sbjct: 68 SGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYENFSI--ASLYLPSGSSGDVRQEYKM 125 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 126 ---QFLEKYKEIL----KEQTESGRDFIVCGDFN--IVHKEVDIKNWKSNYGKTSGVLPE 176 Query: 239 KEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271 ++ + N+ IDY + ++ Sbjct: 177 EQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPTLKDKVV 236 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ES + +Y E+ SDH P++I YD+ Sbjct: 237 PES--DYVYKENWF-------SDHAPLTISYDY 260 >gi|225077368|ref|ZP_03720567.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens NRL30031/H210] gi|224951296|gb|EEG32505.1| hypothetical protein NEIFLAOT_02428 [Neisseria flavescens NRL30031/H210] Length = 261 Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 99/285 (34%), Gaps = 47/285 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---N 78 + V + S+N+ +G+S V+ + L +D++FLQE+ Sbjct: 4 RPVTITSYNM-----HKGMSALNRKVQ-----VNRMADALGALGSDVLFLQEVQGQHLNR 53 Query: 79 AVAKVFPKN-TWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + FP + I S + ++ K H A+ + + + + Sbjct: 54 SRRSDFPDAPHYDIIGDSLDYHRSYGKNAIYPKRHHGNAILSRLPLKTENNL-NISVNKL 112 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E++ E + L +HL N P L Q + + D++ Sbjct: 113 EQRGLLH--CEVVPEGWEDPLVCLCVHL----------NLREPD--RLK-QYRAISDYVG 157 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + P +IAGDFN + + + +D N+ + ++ K +++P Sbjct: 158 RYIRPESPLIIAGDFND--WRQKSARELGRALDLNEVFVDNTGKRP------KTFPSRLP 209 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 I + + + I + K LSDH P+S+ Sbjct: 210 I-------LSLDRIYTRNLDVIDSEIHNSKDWQH-LSDHLPLSVT 246 >gi|281201476|gb|EFA75685.1| putative sphingomyelinase [Polysphondylium pallidum PN500] Length = 421 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 19/198 (9%) Query: 31 INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA------DIVFLQEMGSYNAV-AKV 83 I LS K + Q LD DI+ QE+ S + + Sbjct: 76 IPYLSPWRSPRPPKLLSPVSERKLKEQHQRYAKLDTSILGQYDIICFQELFSAFSYRQRR 135 Query: 84 F---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 F +++T L ++ K D AI + V+ Y D + Sbjct: 136 FLERATAQGFKYHATSPLPSYLKSTFLVDGGVAIISKYPIVKQEYLLYQQGVDSDMLAAK 195 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSF-----CFLDSLENTYSPSCSLLSQQAQWLKDWI 195 G A + +E N I + HL++ +S +N + S +Q L++++ Sbjct: 196 GAIYAK-IEIEKNKHYIHLFSTHLQASYVHPNSTTESTDNVKNDSVRT--KQLNQLREFM 252 Query: 196 TQKKESLV-PFVIAGDFN 212 + P ++AGD N Sbjct: 253 HLMTSNDQYPIILAGDLN 270 >gi|291303122|ref|YP_003514400.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290572342|gb|ADD45307.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 310 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 94/303 (31%), Gaps = 52/303 (17%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKN-SVKRTT--SDYTLLRQYAKNLDADIVFLQEM--- 74 A ++ ++SWN T E G R + ++ D D++ LQE+ Sbjct: 29 ATELNVLSWN--TCGEAGGKRGDAGFCPYRDDPQAKVDVIADLVAERDLDVILLQEVCAE 86 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH----TAIAVRKKNVRVLQQSY 128 S+ K + W I + + D D++ AIA++ N + Sbjct: 87 TADSHLGRLKTALGDDWQI-GNARGARPDGRTDCRGDLNGELGVAIAIKASNAEFTSKQT 145 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 + L V H+ L E+ P QQ Sbjct: 146 LPPDPTGQSKQTLP----TLCATTTDWPTTVCTTHI-----LADPEDPRRP------QQV 190 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---------DSLIRFPK 239 + ++D++ + + V+ GDFN L K I N S + + Sbjct: 191 KNVRDYVWPSRAN---LVLGGDFN-----LFPGSSTLKPISDNFHECDGRSYGSGDKVDE 242 Query: 240 EKDSRCNANKNLRNKIPIDYFVMD--QNAYKFLIQESFSEILYNEDDIKSRG--KRLSDH 295 + + D+ + F +S ++++ ++ G SDH Sbjct: 243 TTHHAWTGDDTHVYRKR-DHIFASKPDSGTNFGSCDSRTDLMDTTENEPDSGPPSGYSDH 301 Query: 296 CPI 298 P+ Sbjct: 302 APL 304 >gi|220933200|ref|YP_002512099.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] gi|219994510|gb|ACL71112.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] Length = 255 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 86/305 (28%), Gaps = 78/305 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L R L D++ LQE Sbjct: 1 MKIATWNVNSL------------KVRLPQVLDWLAAQ----QPDVLALQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + R + S + +A+ ++ + + D R Sbjct: 37 LTDDAFPV--EAIREAGYHCVYSGQKTYNGVAILARHELLD--PLTDIDGLDDPQRRILA 92 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQKKE 200 V+ + V+++++ + + S + Y WL +I + + Sbjct: 93 ATVD--------GVRVINLYVVNGSEVGSEKYAYK---------LDWLGKVTGFIAGEMK 135 Query: 201 SLVPFVIAGDFNRKINYLGNNDD-FWKT-----IDPNDSLIRFPKEKDSRC-----NANK 249 V+ GDFN +D W ++L + S C + Sbjct: 136 RHEKLVVLGDFNIAPEDRDVHDPEAWHEKILCSTPEREALKKILDLGLSDCFRRFEQPEQ 195 Query: 250 NLRNKIP------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + ID + + D R +R SDH P Sbjct: 196 SFSWWDYRAAGFRRNLGLRIDLILSSPALTETCTAC-------IIDVEPRRLERPSDHAP 248 Query: 298 ISIDY 302 + ++ Sbjct: 249 VVAEF 253 >gi|206602794|gb|EDZ39275.1| Exodeoxyribonuclease III [Leptospirillum sp. Group II '5-way CG'] Length = 265 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 98/312 (31%), Gaps = 81/312 (25%) Query: 21 AQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A+ + + +WN+N+L + + + + R AD+V LQE +A Sbjct: 7 ARPLFKTTTWNVNSLKVR--LPQVLDWLVREK--------------ADVVCLQETKLPDA 50 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSFS 138 + R I + S + +A+ + + + S Sbjct: 51 ----------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIELTEASMDDHPDDHRRF 100 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WI 195 + R V ++ ++++ + LDS + TY +WL +I Sbjct: 101 LSARIRGVRIV-----------NVYVPNGQDLDSPKFTYK---------LEWLNRLTRYI 140 Query: 196 TQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + +E+ P ++ GDFN +I + I + Sbjct: 141 EKVREAREPVLLMGDFNIVPGDLDTWDPEGFKDQIFHSPPERKALGNIFQAGFSDLYRTL 200 Query: 241 KDSRC-------NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 R RN+ ID + + E E+ + + K+ R Sbjct: 201 YPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPP-----LSEQCREVFIDREARKAE--RP 253 Query: 293 SDHCPISIDYDF 304 SDH P++ + Sbjct: 254 SDHVPVTALFSL 265 >gi|10957459|ref|NP_051603.1| extracellular nuclease, putative [Deinococcus radiodurans R1] gi|6460888|gb|AAF12592.1|AE001826_61 extracellular nuclease, putative [Deinococcus radiodurans R1] Length = 1067 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 52/287 (18%) Query: 55 TLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + L+AD++ L E+ A+ + + + + + T Sbjct: 520 AKMATTLTTLNADVLSLMEVQNNGDTALNDLVAA------LNEKAGAGTYAAVTTGSVGT 573 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKS-FCF 169 A++ + + P+ + +R V + G V+ HLKS Sbjct: 574 D-AIKVAIIYKPSKVTPVGQFMTDNNSVFSRPPVAQTFRDKTTGGVFSVIANHLKSKGSC 632 Query: 170 LDSLENTYSPSC--SLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNNDDFW 225 S + C L +QAQ L ++ +K ++ GDFN G D Sbjct: 633 PTSGDVDTGQGCWNQLRVRQAQALLGFVDTVKQKSGDQDVLLLGDFN----AYGAEDPI- 687 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNE 282 K + + + +D+ + QN + + + +E Sbjct: 688 KVLQGGG---FESLNLRIPAEDRYSYQFNGLFGYLDHALASQNLSAQVSGITEWHVNSDE 744 Query: 283 DDIKSRG-------------------------KRLSDHCPISIDYDF 304 I R SDH P+ + + Sbjct: 745 PVIADYNTEFKKVAGCTGTNCTGIDLFDPTNPFRASDHDPVLVGLNL 791 >gi|292491294|ref|YP_003526733.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291579889|gb|ADE14346.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 226 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 42/205 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--SYNAVA 81 +RLV++NI+ S + + + RT ++L AD++ LQE+ S N Sbjct: 1 MRLVTYNIS--SCRGTDRCFNPA--RT-------ASVLRSLKADVLALQEVEHRSVNG-Q 48 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA--VRKKNVRVLQQSYPLLGAKDSFSR 139 + + +R +H A R K +++ + +L R Sbjct: 49 DLLDYLAYQTGLVAIPGPIFLRRS----LHYGNALLTRAKVLQIRRHDLSVL-------R 97 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R A+++ ++ G+KI V+ HL + + QQ L Sbjct: 98 REPRGAIDVDLKWRGQKIRVVVTHL--------GLRSRERRFQI--QQLLNLG-----LT 142 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDF 224 V+ GDFN + Sbjct: 143 PDGGRTVLMGDFNEWWPWSQTLRWL 167 >gi|297200306|ref|ZP_06917703.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197709420|gb|EDY53454.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 274 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 65/309 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 A + + S N+N L + + AD++ LQE+ Sbjct: 6 AGVLTVTSANVNGLRAAAKKGFVE---------------WLAETSADVLCLQEVRAEPQQ 50 Query: 79 AVAKVFPKNTWCIFYSTERLINHSK-----RDSNNDIHTAI--AVRKKNVRVLQQSYPLL 131 V W + ++ + R + + A + R ++ P + Sbjct: 51 LPESVRAPEGWHVVHAPAAAKGRAGVSLYTRREPDRVRIGFGSAEFDTSGRYVEADLPGV 110 Query: 132 GAKDSFSRAGNRRAVELLVEINGKKIWVLD---IHLKSFCFLDSLENTYSPSCS--LLSQ 186 + +G E+ E +K+ +D +HLK + + C ++ Sbjct: 111 TVASLYLPSG-----EVGTERQDEKVRFMDEFLVHLKDLRTRAAADGREVVVCGDWNIAH 165 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-- 244 Q LK+W +K S F + ++P D Sbjct: 166 QQADLKNWRANQKSSG--------F-----LPEERAWLSRVLEPTDGGYVDVVRSLHPDV 212 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + IDY V ++ + + +R SDH Sbjct: 213 EGPYSWWSYRGRAFDNDSGWRIDYHVSTPGLASKAVKG-------FVERAATHAERWSDH 265 Query: 296 CPISIDYDF 304 P+++ YD Sbjct: 266 APVTVVYDL 274 >gi|208779224|ref|ZP_03246570.1| exodeoxyribonuclease III [Francisella novicida FTG] gi|208745024|gb|EDZ91322.1| exodeoxyribonuclease III [Francisella novicida FTG] Length = 262 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 85/276 (30%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 24 FKTQDVDFLCMQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 72 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 122 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 123 YKMK---FLEKYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES D R SDH P++I YDF Sbjct: 234 KVVPES---------DYIYRENWFSDHAPLTISYDF 260 >gi|156392379|ref|XP_001636026.1| predicted protein [Nematostella vectensis] gi|156223125|gb|EDO43963.1| predicted protein [Nematostella vectensis] Length = 263 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 +I GDFN +Y+ ++D ++ + + D FV Sbjct: 165 DDVIILGDFNAACDYMRDSDWRVNSLFTDQRFSWLITDCVDTTTGGGACAY----DRFVA 220 Query: 263 DQNA-YKFLIQESFSEILYNEDDIKSR--GKRLSDHCPISIDY 302 A ++ S ++++ + ++SDH PI ++ Sbjct: 221 AGAAMKSAVVPNSPGRFAFDKEYNLTEIVTDQVSDHYPIEMEL 263 >gi|161522526|ref|YP_001585455.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189348598|ref|YP_001941794.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221211889|ref|ZP_03584867.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|160346079|gb|ABX19163.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189338736|dbj|BAG47804.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221167974|gb|EEE00443.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 278 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 41/195 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI +V R + LDAD++ LQE+ Sbjct: 26 GRDLRIATYNI----HGGHGPWHARAVDR-------IAAVIDELDADVIALQEVP----- 69 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---F 137 + R + I TA ++ + YP+ A+ F Sbjct: 70 ---LGGTRAPDVLAPLRDATGMHVAAGPTIDTA---ERRYGNAVLSRYPIRAARTLDLSF 123 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R A++ ++ + V+ HL L + Q Q L Sbjct: 124 HQREPRGALDADIDCRTGPLRVVATHL-------GLSARERSA------QVQRLLAAFDT 170 Query: 198 KKESLVPFVIAGDFN 212 +P ++ GD N Sbjct: 171 ---GAMPVILLGDIN 182 >gi|116193731|ref|XP_001222678.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] gi|88182496|gb|EAQ89964.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] Length = 646 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 27/98 (27%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ +WN + ++ R + T L+ L+ADIV +QE + + Sbjct: 2 PLRITTWN----------GITAVTLPRARTKLTSLQAMFDTLEADIVVMQETK----IQR 47 Query: 83 --------VFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + P W +F+S L + K S I+T Sbjct: 48 KDLRDDMVLVPG--WDVFFS---LPKYKKGYSGVAIYT 80 >gi|70990110|ref|XP_749904.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66847536|gb|EAL87866.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] Length = 439 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 104/319 (32%), Gaps = 46/319 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQY 60 +R + L L +P A+ A + +++ N+ L L N V SD + + Sbjct: 1 MRSFPLVLAAG-IPALAATAGEFNILALNVAGL----PPILNGNDVPGDKSDNSRQIGRK 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D++ +QE +Y+A + + S I +N T VR K Sbjct: 56 FAEYGYDVIHVQEDFNYHAYIYETDNHPYRTPTSGGAGIGSGLNTLSNFEFTNF-VRTKW 114 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 F+ R + V+ ++H + D ++ + Sbjct: 115 ATCSNAEGADCLTPKGFTSMRVRVEEGVYVD-------FYNLHADAGSKDDDVKARSAN- 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-NDSLIRFPK 239 Q L D+I + ++ GD N + G+N ++T + + + Sbjct: 167 -------LQQLADYIKV-NSAGNAVLVFGDTNARYTRTGDNIRVFQTQNGMVNPWVELIL 218 Query: 240 EKDSR--------CNANKNLRNKIPIDYFV------MDQNAYKFLIQESFSEILYNEDDI 285 + + C + +D +D A + + + + Sbjct: 219 QGAAPAEGSNALLCQNPSTTSDCETVDKIFYRGSRAVDLRAVFWNYESN--------KFL 270 Query: 286 KSRGKRLSDHCPISIDYDF 304 +G LSDH PI+ ++ + Sbjct: 271 SDKGTILSDHNPITTNFTW 289 >gi|157804057|ref|YP_001492606.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] gi|157785320|gb|ABV73821.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] Length = 260 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 69/190 (36%), Gaps = 39/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN++ + LLR + + DI+ LQE+ Sbjct: 1 MKIATWNINSIKTR----------------LNLLRNFLSKENPDILLLQEIKCE------ 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 T + + ++ + +A + K + + +P +++ Sbjct: 39 ----TEKFLFDELSDLPYNLYVHGQKTYNGVAIISKFPANEIIKDFP-----NNYCSDQA 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R +E+ + + ++ ++ F+ S + + + L ++++ KK Sbjct: 90 RF-LEIKLSLPIGLCNIISLYAPHGSFVGSDKFVTKLAFY------ESLINYLSTKKSFD 142 Query: 203 VPFVIAGDFN 212 +I GDFN Sbjct: 143 EKTIIGGDFN 152 >gi|226310908|ref|YP_002770802.1| hypothetical protein BBR47_13210 [Brevibacillus brevis NBRC 100599] gi|226093856|dbj|BAH42298.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1829 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 100/345 (28%), Gaps = 82/345 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-----DADI 68 V + K+ + S+NI S + +D + + A+ + DI Sbjct: 953 VTSISPKEDKLTIASYNIENFSAK--------------TDSAKINRIAETIVDNMKAPDI 998 Query: 69 VFLQEMG---------------SYNAVAKVF---PKNTWCIFYSTERLINHSKRDSNNDI 110 + + EM S +A+ K T+ + N +I Sbjct: 999 IGVVEMQDNNGPTDNGQTDATQSADALIKAMENKNGPTYR-YIDIAPQNNQDGGQPGGNI 1057 Query: 111 HTAI-------------------AV----RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 AV R + P + + A +R+ + Sbjct: 1058 RVGFFYNPGRVQLAAGTPGGATDAVQIETRDGVAHLSH--NPGRVDPTNAAFASSRKPLA 1115 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ------WLKDWITQ--KK 199 G+ + V+ H S +L P L + Q L ++ + Sbjct: 1116 AEFIFQGEPVIVIANHFNSKGGDQALFGKDQP--PQLVSEVQRMKIARVLNSFVKEIHSA 1173 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 ++ V+ GD +N ++ + + K N +D Sbjct: 1174 QAKANVVVLGD----LNDFPFSNPV-QELADGVLTNMVEKLPKGEQYTYVYQGNSQVLDQ 1228 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + L ++ +I++ + R+SDH P+ + D Sbjct: 1229 ILVSNH----LEDDTKVDIVHINAGLTENEGRVSDHNPVLVQLDL 1269 >gi|159045536|ref|YP_001534330.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12] gi|157913296|gb|ABV94729.1| hypothetical protein Dshi_2996 [Dinoroseobacter shibae DFL 12] Length = 302 Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 86/286 (30%), Gaps = 55/286 (19%) Query: 7 LALVFFLVPCTA----SVAQKV--------RLVSWNINT--LSEQEGVSLWKNSVKRTTS 52 L L LV CT S A+ + RL S+N++ L EG + +R Sbjct: 11 LVLALGLVACTQLVRNSGAETLPPRPEGALRLASYNVHYIVLGRAEGAWSRGDWERRKGP 70 Query: 53 DYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 L K L+AD+V QEM S + V W + + H + Sbjct: 71 ----LNAAFKALEADLVGFQEMESFLRGSDGSVNLARDWLLAQNPGFAATHHGDWRDTPQ 126 Query: 111 HTAIAVRKKNVRVLQQS------------YPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I R + L++ P + R + G+ Sbjct: 127 TQPIFYRADRLEALEEGWFFFADTPDVIYAPTFNGSFPAFASWARFRDRVT----GRVFR 182 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 V+++H + S+ N + + + A L + V+ GD N ++ Sbjct: 183 VVNVHFE----FRSISNRRLSAALVADRFAPAL--------AAGERVVLLGDINARLGSA 230 Query: 219 GNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQ 264 + ++ N NL ID+ + Sbjct: 231 THG-----ILEDAGWTFLPVAGATYHFNRGLNLFG--AIDHIALAG 269 >gi|330810622|ref|YP_004355084.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378730|gb|AEA70080.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 37/190 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL-GAKDSFSRAGN 142 + + + + + H +A + Q L G + A Sbjct: 38 HDE---QFPLAEVQALGYHVHYHGQKGHYGVA-----LLSRQAPLSLYKGFEGDDEDAQR 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + NG + +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKERFYSDLQQLLESRFSND 144 Query: 203 VPFVIAGDFN 212 P V+ GD N Sbjct: 145 QPVVVMGDVN 154 >gi|307822071|ref|ZP_07652303.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] gi|307736637|gb|EFO07482.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] Length = 502 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 44/274 (16%) Query: 42 LWKNSVKRTTSDY--TLLRQYAKNLDADIVFLQEM--------GSYNAVAKVFPKNTWCI 91 L + + DY + + + +L+ D+V LQE+ G + + + + Sbjct: 244 LNLHCYQEDNQDYKFSQIAKAINDLNVDVVCLQEVAELWNDGAGDWASNSAKIINDR--- 300 Query: 92 FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + + + +A+ K + Q + + + D S + + + Sbjct: 301 LATPYHIHTDWSHLGFDKYREGVAILSKYPLLKQDAKYVSDSHDVHSIHSRKVVMAQIKV 360 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIA-GD 210 ++ V HL + D Q Q L +W K+ + V + GD Sbjct: 361 PYMGRVNVFSAHL--SWWEDGFAG-----------QFQRLCEWAEAKQSAHVNTTLLCGD 407 Query: 211 FNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRN---KIPIDYFVM 262 FN I D + R N IDY + Sbjct: 408 FN--IAAGSTGYHLVVDGHQYDDQYLAANSQGVFEKIFRVNDPYWQNYLSDDYRIDYIFL 465 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 ++ + + ++L+ E D R+SDHC Sbjct: 466 NKTSELQVFSA---KVLFTEQDYG----RVSDHC 492 >gi|270295831|ref|ZP_06202031.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273235|gb|EFA19097.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 249 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 11/76 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ + V F++ + AQ+V ++S+N+ + + K +Y + Sbjct: 1 MKRNLFLSVLFVLMFAPAHAQQVNILSYNV-----HNCIGMDK------EYNYRRIANVI 49 Query: 62 KNLDADIVFLQEMGSY 77 DIV LQE+ S Sbjct: 50 SQTSPDIVALQELDSV 65 >gi|167523152|ref|XP_001745913.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775714|gb|EDQ89337.1| predicted protein [Monosiga brevicollis MX1] Length = 585 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 29/175 (16%) Query: 59 QYAKNLDADIVFLQEM-----GSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + N+ AD++ LQE+ S A +A+ + + + I Sbjct: 124 KILGNVQADVLALQEVMKHEPTSTQAHLLAQELGY-EYVYYARAHEADPKEGGEEGLAIV 182 Query: 112 TAI--AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 + AV + P+ G+ D+ +R + + + G+ + VL H Sbjct: 183 SRFPAAVVQTVPLT-----PMPGSVDANARVFLHARFDTIPALAGESLHVLANH------ 231 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + C A+ L ++ + V+ GD N +N D Sbjct: 232 ---WTYDATAQCHA----ARELLAYLDALPAA-DHVVLLGDLNIYVNSEWPLDWL 278 >gi|160890824|ref|ZP_02071827.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492] gi|317479743|ref|ZP_07938865.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156859823|gb|EDO53254.1| hypothetical protein BACUNI_03269 [Bacteroides uniformis ATCC 8492] gi|316904113|gb|EFV25945.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 249 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 11/76 (14%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 +++ + V F++ + AQ+V ++S+N+ + + K +Y + Sbjct: 1 MKRNLFLSVLFVLMFAPAHAQQVNILSYNV-----HNCIGMDK------EYNYRRIANVI 49 Query: 62 KNLDADIVFLQEMGSY 77 DIV LQE+ S Sbjct: 50 SQTSPDIVALQELDSV 65 >gi|119489711|ref|ZP_01622470.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106] gi|119454448|gb|EAW35597.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106] Length = 273 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 11/122 (9%) Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDDFWKTIDPNDSLIRFPKEKD 242 +QA+ L W ++ +P + GD+N N D + + N ++ Sbjct: 155 EQARLLNRWA---QKQQLPMITVGDYNFDWDVKNGDSKRDPGYDLLTENQVWTWVRPQEI 211 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + R +D+ + + S+ILY E D + SDH P+ Sbjct: 212 IATHCSS--RYDTVLDFVFISSQIQPR---SASSKILYPEADYCPDTSQKSDHRPVQATL 266 Query: 303 DF 304 Sbjct: 267 SL 268 >gi|120601181|ref|YP_965581.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] gi|120561410|gb|ABM27154.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] Length = 257 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 78/303 (25%), Gaps = 74/303 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 RLVSWN+N W + AD+V LQE K Sbjct: 4 RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P S + + ++ +AV ++ + D R R Sbjct: 42 PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + + +I+ + + + A+ L P Sbjct: 97 ----CLHLTFPEFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETL--------RRDRP 144 Query: 205 FVIAGDFN--RK---INYLGNNDDF----------WKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + N+ + F + + Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVATGYVDTFRHVRGDEADRYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF + + + D SDHCP+ + Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVR-----------DAWIEMDVMGSDHCPVGL 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|300691813|ref|YP_003752808.1| hypothetical protein RPSI07_2169 [Ralstonia solanacearum PSI07] gi|299078873|emb|CBJ51534.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum PSI07] Length = 289 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 61/222 (27%), Gaps = 64/222 (28%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-YNAVAKV 83 +++WNI + R D + A+ + D++ LQE+ S + + Sbjct: 5 ILTWNIQW---------GRGVDGR--VDLPRMLAEARAMGPFDVLCLQEVTSGFGNLPGQ 53 Query: 84 FPKNTWCIFYSTERLINH---------SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + W L + + A+ + + + L Sbjct: 54 PGDDQWHEL--ARALGQEFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPV 111 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLK-------------------SFCFLDSLEN 175 D+ R A+E V+ + V+ HL+ + C + Sbjct: 112 DTSPTMP-RMAIEATVQAPFGPLRVVSTHLEYYSETQRIAQIDVLRALHVAGCMRTAHP- 169 Query: 176 TYSPSCSLLSQQ-----AQWLKDWITQKKESLVPFVIAGDFN 212 L + + L VI GDFN Sbjct: 170 ------PTLGPEPADGPFRPLAQ--------THASVICGDFN 197 >gi|300704421|ref|YP_003746024.1| hypothetical protein RCFBP_20225 [Ralstonia solanacearum CFBP2957] gi|299072085|emb|CBJ43417.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum CFBP2957] Length = 289 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 50/215 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-YNAVAKV 83 +++WNI + + R D + A+ + DI+ LQE+ S + + Sbjct: 5 ILTWNIQW---------GRGADGR--VDLPRMLAEARAMGPFDILCLQEVTSGFGNLPGR 53 Query: 84 FPKNTWC----------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + W L H + AIA R + V + + P A Sbjct: 54 PGDDQWRELAGTLGPAFTLIDGIALERHEGARIQRFGN-AIATRLPVLHVARHALPCPAA 112 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R A+E +V+ + V+ HL+ + ++ + L ++ Sbjct: 113 A---CPTMPRMAIEAIVQAPFGPLRVISTHLEY--YSETQRIAQIDALRALH-----VEG 162 Query: 194 WITQKK----------------ESLVPFVIAGDFN 212 W+ VI GDFN Sbjct: 163 WMRAAHPPTLGPEPADGPFRPLAQTHATVICGDFN 197 >gi|317487903|ref|ZP_07946495.1| endonuclease/Exonuclease/phosphatase [Eggerthella sp. 1_3_56FAA] gi|316913029|gb|EFV34546.1| endonuclease/Exonuclease/phosphatase [Eggerthella sp. 1_3_56FAA] Length = 377 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 54/253 (21%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 +D + ++ +++ +QE+ S + + ++ + S I Sbjct: 160 ADAEQIVSIVRDQHVEVLAMQEV-SGSLIERLSAAGLDELLPSR-------------VIG 205 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A A V V+ P+ A +S + ++ ++ H Sbjct: 206 LAGAGDNGGVNVIYTLAPMRNASESILPLTGSAVPACTITAGSHEVRLVSAH-------- 257 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 SP L + L + + + ++I GDFN ++ Sbjct: 258 ----PTSPKTGTLGFWNESLTN-LGTLRRYSDEYLIMGDFNSTWDHSRYRKML------G 306 Query: 232 DSLIRFPKEKDSRCN---ANKNLRNKIP------IDYFVMDQNAYKFLIQESFSEILYNE 282 D+L+ ++ + ++ +P ID+ V +N+ + Sbjct: 307 DTLVDASEQAGEGFHMTYPSEPHYAMVPVPPMIEIDHIVYSKNSGM------------SV 354 Query: 283 DDIKSRGKRLSDH 295 D+++ + SDH Sbjct: 355 GDLETVNVQGSDH 367 >gi|323524486|ref|YP_004226639.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323381488|gb|ADX53579.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 265 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQRWVQSTHADAYFLQE-----AMARRMPSP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGAPVTDPLNDVWHCQATEIARALQLEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI K+ P V+AGDFN Sbjct: 170 WIAHWI-TKEAPDGPLVLAGDFN 191 >gi|257791630|ref|YP_003182236.1| Endonuclease/exonuclease/phosphatase [Eggerthella lenta DSM 2243] gi|257475527|gb|ACV55847.1| Endonuclease/exonuclease/phosphatase [Eggerthella lenta DSM 2243] Length = 357 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 54/253 (21%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 +D + ++ +++ +QE+ S + + ++ + S I Sbjct: 140 ADAEQIVSIVRDQHVEVLAMQEV-SGSLIERLSAAGLDELLPSR-------------VIG 185 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 A A V V+ P+ A +S + ++ ++ H Sbjct: 186 LAGAGDNGGVNVIYTLAPMRNASESILPLTGSAVPACTITAGSHEVRLVSAH-------- 237 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 SP L + L + + + ++I GDFN ++ Sbjct: 238 ----PTSPKTGTLGFWNESLTN-LGTLRRYSDEYLIMGDFNSTWDHSRYRKML------G 286 Query: 232 DSLIRFPKEKDSRCN---ANKNLRNKIP------IDYFVMDQNAYKFLIQESFSEILYNE 282 D+L+ ++ + ++ +P ID+ V +N+ + Sbjct: 287 DTLVDASEQAGEGFHMTYPSEPHYAMVPVPPMIEIDHIVYSKNSGM------------SV 334 Query: 283 DDIKSRGKRLSDH 295 D+++ + SDH Sbjct: 335 GDLETVNVQGSDH 347 >gi|239611755|gb|EEQ88742.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis ER-3] gi|327348230|gb|EGE77087.1| endonuclease/Exonuclease/phosphatase [Ajellomyces dermatitidis ATCC 18188] Length = 1194 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 58/173 (33%), Gaps = 24/173 (13%) Query: 65 DADIVF--LQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I+ QE+ S + P N + + +N+ + Sbjct: 645 DPSILAVGFQEIVELSPQQIMSTDPGNRLIWENAVKDTLNYYAHSKGVSEYVLLRSGQLV 704 Query: 113 AIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 A V+ + + ++ + AGN+ + ++ + +I + HL + Sbjct: 705 GTALLVFVKSELLTEIKVVEGSVKKTGMSGMAGNKGGCAIRLQYSNTRICFVTAHLAAG- 763 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGN 220 F + + + ++Q + + + +I GDFN +I G+ Sbjct: 764 FSNY--DERNRDYQTINQGLR----FQRNRSIEDHDIIIWLGDFNYRIGLPGD 810 >gi|226355160|ref|YP_002784900.1| exodeoxyribonuclease III [Deinococcus deserti VCD115] gi|226317150|gb|ACO45146.1| putative exodeoxyribonuclease III [Deinococcus deserti VCD115] Length = 260 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 95/307 (30%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS---YNAV 80 +++ + N+N L +L K LR + D++ LQE+ + A+ Sbjct: 12 LKVTTLNVNGLRS----ALRKG-----------LRDWLLREAPDVLLLQEVRAGPMPEAL 56 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + W + ++ +AV ++ ++ L D+ R Sbjct: 57 QDLGYDGAWF--------------PAQKAGYSGVAVLSRHPLRDIRAGMLHDEMDAEGR- 101 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQ 197 +V + + + ++L S + + L D W+ Sbjct: 102 --------VVSAVVQGVRFVSVYLPSGSSGELRQGFKDR----------ILDDYHTWVQA 143 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----RFPKEKDSR---CNANK 249 + P VI GD+N I + + W++ N + + C+ N Sbjct: 144 LLDEQTPVVIGGDYN--IAHREIDLKNWRSNRKNSGFLPHEREWMTAHLSAGLVDCHRNC 201 Query: 250 --------NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 N+ IDY + + R RL Sbjct: 202 LGEAAEYTWWSNRGNAYANNVGWRIDYLLSAGVQVR--------------GVCVDREARL 247 Query: 293 SDHCPIS 299 SDH P++ Sbjct: 248 SDHAPLT 254 >gi|212532511|ref|XP_002146412.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Penicillium marneffei ATCC 18224] gi|210071776|gb|EEA25865.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Penicillium marneffei ATCC 18224] Length = 1124 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 51/273 (18%) Query: 68 IVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA-- 115 +V QE+ S + PK S +N + + A Sbjct: 649 VVAFQEIVELSPQQIMSTDPKPRMTWENSVRNCLNEYADRMGTNRYVLLRSGQLVGAALL 708 Query: 116 --VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 VR+ + ++ + AGN+ + +E + KI ++ HL + F + Sbjct: 709 VYVREDALGDIKNVEGSVKKTGLSGMAGNKGGCAIRLEYSNTKICLVTAHLAAG-FANY- 766 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY---------------- 217 + + + +S L+ + E + GDFN +I Sbjct: 767 -DERNKDYATIS---NGLRFRYNRTIEDHDAIIWLGDFNYRIGLDNQEVRQLIKNHEFGK 822 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-------YKFL 270 L +D + + + + + + D + Sbjct: 823 LYEHDQLNLQMLAGRTFPFYSEGLI---RFAPTYKYDLGTDNYDTSDKGRIPAWCDRVLW 879 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I Y +IK+ SDH P+S +D Sbjct: 880 KGGGLKQIDYAAANIKT-----SDHRPVSSLFD 907 >gi|184199810|ref|YP_001854017.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] gi|183580040|dbj|BAG28511.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] Length = 268 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 96/318 (30%), Gaps = 88/318 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N R +D + + D D++ +QE A + Sbjct: 1 MRIATWNVN--------------SIRARAD--RIEAWLDRSDVDVLAIQET---KAKDEN 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRAGN 142 FP W +F + + +A+ + Q +P + Sbjct: 42 FP---WELF----EFAGYEVAHFGVNQWNGVAIASRVGLTDVQRTFPDQPTFGKPGQEPA 94 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL-------KDWI 195 + A + G ++W L + N + + +WL K W+ Sbjct: 95 QEARAIGATCGGVRVWSLYV-----------PNGRGLDDPHMPYKLEWLRVLEGHAKQWL 143 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWK-TIDPNDSLIRFPKEKDSRCNA------- 247 +++ + GD+N +DD W + + + + +A Sbjct: 144 --QEDPDAQIALVGDWN----VAPQDDDVWDIQLFKEGGYTHVSEPERAAFHAFIEDAGY 197 Query: 248 ------------------NKNLRNKIP----IDYFVMDQNAYKFLIQESFSEILYNEDDI 285 K LR ID+ + + + + D+ Sbjct: 198 QDVVRPRHPGPGVYTYWDYKQLRFPKKEGMRIDFQLCSPA-----LAARVQDAWIDRDER 252 Query: 286 KSRGKRLSDHCPISIDYD 303 K +G SDH P+ I+ D Sbjct: 253 KGKGA--SDHAPVVIEID 268 >gi|114332258|ref|YP_748480.1| endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] gi|114309272|gb|ABI60515.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] Length = 253 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 32/197 (16%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + ++NI +G+S + V LR Y ++L+ DI+FLQE+ + + Sbjct: 6 RTLHIATYNI-----HKGLSFFNQRVV-----LHELRDYLRSLNVDIIFLQEVIGEHTLH 55 Query: 82 ----KVFPKNTWCIFYSTERLIN--HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + +PK+ F + + + K N H A+ + + + A Sbjct: 56 ASRFQDWPKDAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWE-NEDISAHR 114 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 SR + + + + + +HL F +Q + ++ I Sbjct: 115 FESRGLLHCELAIPGWKD--ALHCICVHL--GLFKRGR-----------YRQLEAIERRI 159 Query: 196 TQKKESLVPFVIAGDFN 212 Q P V+AGDFN Sbjct: 160 RQLVPPDAPLVLAGDFN 176 >gi|320094390|ref|ZP_08026175.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] gi|319978676|gb|EFW10234.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] Length = 275 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 11/155 (7%) Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + +QE+ + +++ W + R+ + IAV + ++ Sbjct: 33 LLMQEVRAPEEISRGILPGQWDSVWVPCRIKGRAG--------VGIAVHRDRGALVGPPR 84 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 L +S + +G V + + + ++ + S + + L + Sbjct: 85 TALDGAESDADSGRWLEVLVEADGAPSPVRLVSAYFHSGEKDTPKQEAKM---AHLPRIG 141 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + + V+ GDFN + + Sbjct: 142 ARMAELLASAASGGEQAVVCGDFNVVRSRADIKNW 176 >gi|297735011|emb|CBI17373.3| unnamed protein product [Vitis vinifera] Length = 400 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 62/289 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++V++N+N L R + + L ++ +LDADI+ +QE + A Sbjct: 1 MKIVTYNVNGLR------------PRISQ-FGSLLKFLSSLDADIICVQETKLSRHELTA 47 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 V + + F+S R N R + + T K + + P+ + Sbjct: 48 DVVMADGYESFFSCTRT-NSKGRVGYSGVAT-FCRVKSAFSSTEVALPIAAEEGFTGLLE 105 Query: 142 NRRAV-----ELLVEING----KKIWVLDIHLKSFC----------FLDSLENTYSPSCS 182 E+ V+ G K +L + + C F S Sbjct: 106 KSGGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTE 165 Query: 183 LLSQQ---AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------DFWKT 227 + + Q L+ ++ + GD N + D F Sbjct: 166 RIQFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSM 225 Query: 228 IDPNDS-------LIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN 265 + + + C ++ ID+ + + Sbjct: 226 LVECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGS 274 >gi|197123156|ref|YP_002135107.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] gi|196173005|gb|ACG73978.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] Length = 296 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 99/297 (33%), Gaps = 50/297 (16%) Query: 19 SVAQKVRLVSWNINTL------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++VR+VSWN++ L + G + + + LDAD+V LQ Sbjct: 34 TAGERVRIVSWNVHDLFDDVDRTVPPGALDTVATADEVEAKLARVAAVLARLDADLVLLQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---P 129 E+ + + + + + + R + + + + +R ++ P Sbjct: 94 EVETAALAGALAARAG---YAEARLVEGNDPRGIDVAVLSRLPLRAYVSHRDERDASGRP 150 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L + A G + ++ HL S D +QA Sbjct: 151 LFPRDCVEAHAAL---------PGGGTLALVGSHLSSALSDDGTRRA---------EQAA 192 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 L++ + V GD N + D W IDP +L + S Sbjct: 193 RLREVADGLLRAGAQVVAGGDLNDEAGSTALAPLLGDGGW--IDPAAALPPEARWTWSGG 250 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 A + +D+ + + ++Q + + D+++ SDH P+ +D Sbjct: 251 GA------RAALDHLAVPRADAGSVVQAAIAGGP----DVQAA----SDHRPVVLDL 293 >gi|153832651|ref|ZP_01985318.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148871217|gb|EDL70095.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 451 Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 84/291 (28%), Gaps = 50/291 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+ + + + + L Y D++ LQE S Sbjct: 181 HVLQVATYNL-WMIPSVSSDIAARAAMMEHN----LSGY------DVLALQEAFSS---- 225 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + + +N ++ V +L+ + Sbjct: 226 --YREPMFDALSDEYPYRTDVVGGDSNAMYDGGVVTLSRYPILESDALVFDHCSGTDCYA 283 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSF----CFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 ++ V ++ NG+ + + HL SF +L++Q Sbjct: 284 DKGIVYTKIDKNGEIYHIFNTHLASFDTREAKRLRRLQLGLLRTFMLTKQIPA------- 336 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK------TIDPNDSLIR----FPKEKDSRCNA 247 + AGDFN + N DF + T++ + E A Sbjct: 337 ----DEAVIYAGDFN-----IDKNSDFMEYLLMLATLEVDPPAYLGYTPATFEPKINAYA 387 Query: 248 NKNLR---NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + N +DY ++ + + ++ + LSDH Sbjct: 388 SANYSGGEKSEYLDYVLVSSEHRRAFENTNTVKLRQRVTEDTWGEWHLSDH 438 >gi|332308078|ref|YP_004435929.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175407|gb|AEE24661.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 237 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 66/288 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-------GS 76 +R+V++NI GV + Y+ + Q+ + + DI +QEM + Sbjct: 1 MRIVTYNI-----HSGVGVD------EVQSYSRIGQFLASQNVDIALIQEMDTRPCERDT 49 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + I S + + N A+ R + G Sbjct: 50 EQDIKDL--SANHFIALSRSPALEETHGWYGN----AVLSRYPVLSTKTVDVSQDG---- 99 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R E++++ + + V++ H L+ +Q L +++ Sbjct: 100 ---FQPRNIQEVVLDTHVGPVRVINTH-------KGLKKQERR------KQFALLAEYLE 143 Query: 197 QKKE-SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q S +P ++ GDFN + + T ++K + ++ Sbjct: 144 QSMAVSSIPLIVGGDFN---------EWQFFTRAFRTINQVLTEQKVAATFPTAWPLFRL 194 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + + + SDH PI + +D Sbjct: 195 --------DRMWTSFNDNKIEAQVLKTPETRYY----SDHYPILLTFD 230 >gi|291515221|emb|CBK64431.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 306 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 45/290 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++R++S+N+ S +G + W N K + + ++ +QE Sbjct: 53 QLRVMSFNVRYSSGDDGANSWDNRKK-------AVPAMFADQQPTVLGVQEARLDQKTYM 105 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR----KKNVRVLQQSYPLLGAKDSFS 138 + ++ + A AV+ P +G S Sbjct: 106 DENCAGYKSVGVGRTDGQNAGEFMAI-YYLADAVKLEKWGTFWLSDTPDVPSVGWDASTY 164 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWIT 196 R W L H KS NT+ ++ Q + ++ I Sbjct: 165 RT---------------ATWALFTHYKSG-RKFFYVNTHIDHVGQVAAQKSMELIEAKIR 208 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 P V+ DFN+ ++ D K + + + N N Sbjct: 209 SLNPDNQPTVLTADFNKMLDSPIF-DGV-KKFMADARTTAPVTDNKASFNNFGGATNYPR 266 Query: 257 IDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ + + + ++ Y +SDH PI+ +F Sbjct: 267 IDHIFSSGFTPLRFATVDQRYEKVPY-----------ISDHYPIAAVLEF 305 >gi|317478865|ref|ZP_07938015.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316904947|gb|EFV26751.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 361 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 68/306 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI G + S K + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNI----HNFGGEITGYSCK-------EIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP + S R+++H +V+ + YPL + Sbjct: 147 SD----FPTD------SIRRVLSHWSHALIPSED---SVKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------------TYSPSCS 182 + + ++ V + I +++ HL++ + Sbjct: 194 YQHSSNCSMICDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 183 LLSQQA--QWLKDWITQKKESLVPFVIA--GDFN---RKINYLGNNDDFWKTIDPNDSLI 235 L + + + ++ P+ + GDFN Y + Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHHLRKTLKDGFRTAGNGY 313 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + + IDY S I Y D+ SDH Sbjct: 314 MYTY---------RYAKRMLRIDYIF---------HSPSLKGIEYYSPDLDLC----SDH 351 Query: 296 CPISID 301 P+ ++ Sbjct: 352 NPVIME 357 >gi|300774457|ref|ZP_07084320.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] gi|300506272|gb|EFK37407.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] Length = 261 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 48/252 (19%) Query: 60 YAKNLDADIVFLQEMGSYN----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 Y K+ DAD+ LQE K P I + + + D Sbjct: 46 YLKSQDADVFLLQEDAGIKYHFDGYQKANPGGGLTILTKHKIIKQQIIDPQDED------ 99 Query: 116 VRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 VR V + D + R +++ ++ Sbjct: 100 VRIPGVLADIEIKGRTYRFIDVYLN-PFRFEKDMVKLNGDTDTD-----------EQKIK 147 Query: 175 NTYSPSCSLLSQ---QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 + + Q +++ I + S P ++AGDFN N + + Sbjct: 148 DVIKRLIPTFKKHQDQVALIREAI---ENSPYPVILAGDFN-----SVPNSYEYYHLSDG 199 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 K S + + + + I IDY +S I Y D R Sbjct: 200 LEDTFLTAGKGSATSFH-DYKFPIRIDYVFSS---------KSLKAISYKVD----RSVS 245 Query: 292 LSDHCPISIDYD 303 +SDH P+ + + Sbjct: 246 ISDHYPVIVKFS 257 >gi|294013493|ref|YP_003546953.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] gi|292676823|dbj|BAI98341.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] Length = 265 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 82/315 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +Q + + SWNIN R D + ++ DI+ LQE Sbjct: 2 SQTLSIASWNIN--------------SVRARLDI--VERFLTEESPDILCLQE------- 38 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 KV +T+ +R NH + +H +A+ K D + Sbjct: 39 TKVV-NDTFPAGLFRQRGYNHQ-VLNGQPMHHGVAILSKIPIREDDRL------DWQANG 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK---DWITQ 197 R V + ++ + + ++++ + D + +P Q+ +L+ W + Sbjct: 91 EARH-VGVRLDNG---VRIENVYVPAG--GDVPDREVNP---KFGQKLDFLERMIQWSST 141 Query: 198 KKESLVPFVIAGDFN----------RK---------------INYL-GNNDDF--WKTID 229 ++ P ++ GDFN K + L +ND + Sbjct: 142 LEDK--PTILTGDFNIAPMECDVWSHKQLLNVVSHTPIECEILARLQESNDWVDIGRKFY 199 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 P + +R A + + +D+ M ++ + + E + Sbjct: 200 PAPQRLYTWWSYRARDWAESDRGRR--LDHMWMTRDVAEKAVSHRVVEPI-------RGW 250 Query: 290 KRLSDHCPISIDYDF 304 R SDH PI ++ F Sbjct: 251 SRPSDHVPIITEFAF 265 >gi|291414604|ref|XP_002723552.1| PREDICTED: deoxyribonuclease I-like 2 [Oryctolagus cuniculus] Length = 304 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ D + ++ + Sbjct: 194 LDVIDKW------GSDDMLFLGDFNADCSYVRAQDWASIRLRSSEVFKWLIPDSADTTVG 247 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N + D V + L +S + + E+ + + L SDH P+ + Sbjct: 248 NSDCAY----DRIVACGARLRRSLKPQSATVHDFQEEFGLDQTQALAISDHFPVEVTL 301 >gi|262037338|ref|ZP_06010804.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] gi|261748641|gb|EEY36014.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] Length = 249 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 82/254 (32%), Gaps = 52/254 (20%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHT 112 + + ++ K + DIV L E+ + KN + + + K N+ Sbjct: 35 SRIGEFIKGYNPDIVGLVEVD--LGSFRTEEKNQAELLGKITGNHCVFQYKYQKNSRYMK 92 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 VRK+ +L ++ + + L++EI + V +HL Sbjct: 93 VPMVRKQGNALLSKTEIKSKKFHYLNNGMKK----LVMEIETDSVTVFLVHLALGG---- 144 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 +Q L+ I ++ PF++AGDFN W + + Sbjct: 145 ---------KTRLKQIVQLRKLI---QDCRKPFIVAGDFN----------VLWGN-EEIE 181 Query: 233 SLIRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + + + P +D+ + + + + Sbjct: 182 LFLEASGLHNVNVHREPTFPSWAPKKELDFILCSKEI--------------KVKEFQVIK 227 Query: 290 KRLSDHCPISIDYD 303 LSDH P+ ID++ Sbjct: 228 TLLSDHLPVIIDFE 241 >gi|56695135|ref|YP_165482.1| hypothetical protein SPO0213 [Ruegeria pomeroyi DSS-3] gi|56676872|gb|AAV93538.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 357 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIR L L A+ A+ +R+ ++N + G+ L + R T + Sbjct: 1 MIRLAALVLCLL---PVAAAAEVLRVATFNTELSRKGPGLMLRDIAGGRDTQ-VAAVVSV 56 Query: 61 AKNLDADIVFLQ 72 + DI+ LQ Sbjct: 57 IASARPDILALQ 68 >gi|84496163|ref|ZP_00995017.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649] gi|84382931|gb|EAP98812.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649] Length = 225 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 87/289 (30%), Gaps = 76/289 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 +R+ S+N E + + + +D D++ LQE+ + Sbjct: 3 TIRIASYNTRDFLEDPYAA----------------ARVVRAIDPDVLCLQEVP-----RR 41 Query: 83 VFPKNTWCIFYSTERLINHSKR-------DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 +F ST R+ N ++ T I ++ V + L A+ Sbjct: 42 LF---------STRRVANFARHCGMSWSGRHRGSGGTTIFTSQRVDVVESIHHRLRVARL 92 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 +R AV + + + V +HL LD+ E Q I Sbjct: 93 QRTRG---FAVARVAAPGCEPVAVASVHL----SLDAHERAAHA-------QV------I 132 Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 Q ++AGD N G++ D WK L+ K Sbjct: 133 LQTINVGGEVILAGDLN-----EGDSGDAWKAFAGVMRLVSPTTPTYPATRPRK------ 181 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D L E ++ E D+ + SDH P +D Sbjct: 182 VLDVIFASAG----LQAEPHVDLPIAEADLIAG----SDHRPTWVDIRL 222 >gi|329928380|ref|ZP_08282250.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] gi|328937816|gb|EGG34222.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] Length = 2084 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 104/343 (30%), Gaps = 91/343 (26%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQ-YAKNL-DADIVFLQEMGS-- 76 A+++R+ ++NI +++ L + N+ DI+ L E+ Sbjct: 824 AEQLRVATYNIEN-----------FYPGVSSAKINKLAESIVNNIKSPDIIGLVEVQDNN 872 Query: 77 -----------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 NA+ K T+ F E + N+ +I Sbjct: 873 GEQNNGTTAADQSYQTLINAI-KAAGGPTYS-FTDIEPVNNNDGGAPGANIRVGFLYNAD 930 Query: 120 NVRVLQ----------QSYPLLGAKDSFSRAG------------NRRAVELLVEINGKKI 157 V++ +S A D + +R+ + E G+K+ Sbjct: 931 RVQLTDSVQGKKGSPTESVAYDAATDQLTLNPGRIDPQNAAFNASRKPLAAQFEFQGEKV 990 Query: 158 WVLDIHL--KSFCFLDSLENTYSP----SCSLLSQQ-AQWLKDWITQKKESLVP--FVIA 208 V+ H KS D + S Q A + ++ + V+ Sbjct: 991 IVIANHFNSKSG---DQGPFGNTQPPVLSSETQRHQIAAVVNGFVKDVVSANPDANVVVL 1047 Query: 209 GDFN-------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 GD N I D+ +T+ + N +D+ + Sbjct: 1048 GDLNDFQFTETTNILKGNELDNLIETLPLKEQYTYTYDG------------NSQVLDHIL 1095 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +N L + + +I++ D + R+SDH P+ D Sbjct: 1096 VSKN----LTRSTQVDIVHLNADFPASKGRVSDHDPVVAQIDL 1134 >gi|330941805|gb|EGH44552.1| exonuclease III [Pseudomonas syringae pv. pisi str. 1704B] Length = 270 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 55/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEDS 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKRRFYENLQTLLEGQFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|315633964|ref|ZP_07889253.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC 33393] gi|315477214|gb|EFU67957.1| endonuclease/exonuclease/phosphatase [Aggregatibacter segnis ATCC 33393] Length = 263 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 49/259 (18%) Query: 67 DIVFLQEMG---SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK---KN 120 DIV LQE+ S A+++ ++ + + + ++ S ++ I K Sbjct: 33 DIVALQEVNQLMSAPAISQALKQDNYGVVLLNKINQRARQKYSLFWSNSHIGYDKYDEGI 92 Query: 121 VRVLQQSYPLLGAKDSFSRAGN-----RRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + + + A R+ + L VE G+ + H+ Sbjct: 93 AFLTRLPVYEVDAFYCSQHQRLDSILSRKILGLTVEYEGQLVDCYSCHI----------- 141 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----------RKINYLGNNDDFW 225 P+C+ +Q L I ++ +S ++ GDFN +KI LG D + Sbjct: 142 -NLPNCAGENQLDNILN--IVERSQSQNLKILMGDFNTDAISDPNAYQKIKSLGLLDT-F 197 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + DS I K D K + +DY ++Q S++++N + Sbjct: 198 EMAEQKDSGITVEKAIDGW----KGHSEEKRLDYIFLNQTKRVLS-----SQVVFNGKNK 248 Query: 286 KSRGKRLSDHCPISIDYDF 304 SDH + ++ Sbjct: 249 PVV----SDHFGLEVELTL 263 >gi|56477773|ref|YP_159362.1| endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] gi|56313816|emb|CAI08461.1| predicted endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] Length = 250 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 79/267 (29%), Gaps = 64/267 (23%) Query: 57 LRQYAKNLDADIVFLQEMGSY----NAVAKVFPKNTWCIFYSTERLIN--HSKRDSNNDI 110 LR+ + LD D+VFLQE+ + +P + F + + + + Sbjct: 27 LRERLRTLDVDVVFLQEVQGLHLGHANLHPNWPGSPQHEFLAEDVWSQFAYGGNAVYDHG 86 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 H AV R V + Q F R G E+ V G+ + + HL Sbjct: 87 HHGNAVLSRYPIVSSMNQDVSD----HRFERRGILH-CEVEVPGIGEPVHCVCAHL---- 137 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----------RKINY 217 + + +Q L + + Q P +IAGDFN R++ Sbjct: 138 --GLMAGSRR-------RQMGALAERMEQVAPGGAPLIIAGDFNDWRNRAAQLLGRRLGL 188 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 D + FP C +R F Sbjct: 189 REAFDR-----GRGEPARSFPSTVPVLCLDRIYVR---------------------GFRV 222 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 R+SDH ++ + +F Sbjct: 223 RQAQVHCGLPW-SRISDHAALTAELEF 248 >gi|88811277|ref|ZP_01126533.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] gi|88791816|gb|EAR22927.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] Length = 280 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 69/240 (28%), Gaps = 45/240 (18%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D DIV LQE+ + + + + + + + R N + Sbjct: 78 DFDIVGLQEIDAGSLRSGFINQAAY---LAQR--GGFPFWHFQTNRRIGRLARHSNGVLS 132 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + R A+ L + + V+ +HL Sbjct: 133 RFRPLEVRNHRLPGMIPGRGALHLRFGGPAEGLDVVLLHLALGQ-------------RTR 179 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 +Q ++ + + ++ GD N + + +D + L Sbjct: 180 LRQL----AYVAELVNACRHVIVMGDLN-----CLSRSVEFDYLDKHTDLCEPIHNL--- 227 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R ID+ ++ L S + Y LSDH P+ ++ + Sbjct: 228 -HTYPSWRPHRNIDHILVSPT----LQVRSAEALNYP----------LSDHLPVIMEVEL 272 >gi|238027065|ref|YP_002911296.1| endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] gi|237876259|gb|ACR28592.1| Endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] Length = 285 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 +RL+ WNI + + + RT + L + D+ +QE+ Sbjct: 1 MRLIDWNIQW----GRDASGRVELARTVAQARALADF------DVWCVQELTRGFAALPG 50 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + +A + P + + + + + AIA R RVL+ P Sbjct: 51 GPGPDQFAELAALLPG--YTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLP 108 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 ++ + + R A+E+ + G + ++ HL + + Q Sbjct: 109 WPA--EAGTPSMPRIALEVNLCGAGGPLRIVTTHL------EFYSAAQRLA------QVD 154 Query: 190 WLKDWITQKKESLV------------PF---------VIAGDFNRKINYLGNNDDFWKTI 228 L++ ++ + PF ++ GDFN DD ++ I Sbjct: 155 ALRE--QHREAAGHAHRPAPAETPDGPFAGSARALDAIVCGDFN-----SAYRDDAYRRI 207 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 + + + + + + + ++ + ++ D + R Sbjct: 208 TAPIAGAPDLVDAWVQAHPGQTPPPTAGVY------DTEQWQDGAMTCDFVFVTDTLAKR 261 Query: 289 --------GKRLSDHCPISIDY 302 R SDH PI ++ Sbjct: 262 IVRCEIDGATRASDHQPILLEL 283 >gi|149173168|ref|ZP_01851799.1| hypothetical protein PM8797T_28299 [Planctomyces maris DSM 8797] gi|148847974|gb|EDL62306.1| hypothetical protein PM8797T_28299 [Planctomyces maris DSM 8797] Length = 243 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 87/279 (31%), Gaps = 63/279 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ V WN L LL + + +++ L E A A + Sbjct: 1 MKTVVWNTQWAVPGSKRGL-------------LLSELIQQQQPELICLTE-----AQAGL 42 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P++ I S + I R+K + + + + + + R Sbjct: 43 LPRDGHVIESSPD---------YGYPIKPG---RRKVILWSKHPWNEVSQHEQLNFPLGR 90 Query: 144 RAVELLVEINGKKIWVLDI-------HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + + +L + H+ S ++ + LL L+ + Sbjct: 91 IVSGIT-----RGVRMLGVCIPWNAAHVSSG-----RKDRKNWEDHLLY--LDALQQ-LL 137 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + VP I GDFN+++ ++ ++ SL + N Sbjct: 138 TELDQQVPLAITGDFNQRLPRSRQPKYAYEKMNAVLSLGLTVHT-----SGNLGPEGAQL 192 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 ID+ L + + D + + G RLSDH Sbjct: 193 IDHM----ATTSDLQFNGLTVL----DRVSTEGVRLSDH 223 >gi|229032715|ref|ZP_04188676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228728610|gb|EEL79625.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 337 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 102/315 (32%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T ++ + + +N ++D LQE+ Sbjct: 41 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFALLQEVD- 99 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---------------RKKNV 121 ++ + F N S + + + + + K Sbjct: 100 IKSL-RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTFSKYKVQ 158 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 + P + +R VE + +N K + ++++HL + D Sbjct: 159 TAERFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---YDEGGKIR--- 212 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQ ++LK+++ + E+ ++ GD+N+ ++ + +D + P + Sbjct: 213 ----KQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSDVQLSDPKFVKERPEWLVELPKNF 268 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + K ID F++ N + D Sbjct: 269 TNGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 319 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 320 LKFEN---SDHNPVS 331 >gi|156365697|ref|XP_001626780.1| predicted protein [Nematostella vectensis] gi|156213669|gb|EDO34680.1| predicted protein [Nematostella vectensis] Length = 327 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 94/323 (29%), Gaps = 77/323 (23%) Query: 21 AQKVRLVSWNI--NTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDADIVFL 71 R++ WN+ + LS S + R + Y + DI+ L Sbjct: 41 GSPFRVMQWNVLADGLSGSSPTSNFIKCPSEALSWSTRKQRLIQGILTY----EPDIICL 96 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL 131 +E+ + + F K + +T I V K++ L+ +P Sbjct: 97 EEVD-----------HFYDFF----------KPSLDEVGYTGIFVPKEDSPCLK--FPGN 133 Query: 132 GAKDSFS------RAGNRRAVELLVEINGKKI---WVLDIHLKSFCFLDSLENTYSPSCS 182 D + R R+ ++ + + L +HL D+L C Sbjct: 134 SGPDGTAIFFDKQRFKLRKQQSKQLKNSDGTLTNQTALFVHL-----FDNLNKKSLYCCG 188 Query: 183 L-LS----------QQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 L Q + + ++ + ++ GDFN + ++ ++ Sbjct: 189 THLKAKPAFQDLRSAQGKSVLAFLKDFMENEQAEVLVCGDFN-----AEPTEPVYQVMED 243 Query: 231 N--DSLIRFPKEKDSRCNA-------NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 +R + SR N K IDY + N Sbjct: 244 GVHGVPLRSAYKTISRSEPDYTTWKIRPNGEVKHTIDYVWHSEGLKVDGYLHVADTASMN 303 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 D + SDH + D+ F Sbjct: 304 VDRLPCMAY-PSDHISLVFDFSF 325 >gi|153005502|ref|YP_001379827.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029075|gb|ABS26843.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 289 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 106/329 (32%), Gaps = 66/329 (20%) Query: 1 MIRKYVLALVFFLVPCTASVAQK-----------VRLVSWNINTLSEQEGVSLWK----- 44 M + + + + C + +R+ +WN++ L + E L Sbjct: 1 MRSRALTFVAAVVAGCGPLLDAPADRRPGLEGTVLRVATWNVHDLFDAEDRLLPPGAEDA 60 Query: 45 -NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 S + + + + +DAD+V LQE+ + + + + + Sbjct: 61 LPSPEAVKAKLDAVAEVLLRVDADVVLLQEVETLALASALAARAGY---------GEARL 111 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIWVLDI 162 + N+ +AV + S+ D R R VE+ + + G++I ++ Sbjct: 112 VEGNDPRGIDVAVLSRPSIHRYVSHA--AELDGDGRTLWPRDCVEVHLGVGGRRIAIVAS 169 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL S D + + + + D I++ + ++ GD N D Sbjct: 170 HLSSRLSDDGTRRAAQAA------RMRAIADAISE-ADPEALVLVGGDLN---------D 213 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-------IPIDYFVMDQNAYKFLIQESF 275 P + + + + +D ++ + + ++ Sbjct: 214 P------PTAPALAPLAGDGAHVDPLPSWETTWSSGSPAERLDALLVGRASAAAIV---- 263 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ D+ R SDH P+ +D Sbjct: 264 RAVVERGTDV----ARASDHQPVVLDLRL 288 >gi|256819956|ref|YP_003141235.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] gi|256581539|gb|ACU92674.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] Length = 348 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 75/242 (30%), Gaps = 43/242 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVS-----WNINTL--SEQEGVSLWKNSVKRTTSD 53 M R L + F L+ + +K + +N+ L + + + +D Sbjct: 1 MKRIVFLMVSFILMTPYINAQEKKKFAVRTVAFYNVENLFDTINDPHKFDDDRTP-EGAD 59 Query: 54 -----------------YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT-----WCI 91 + + DIV L E+ + V + + I Sbjct: 60 RWTSKVYNDHVHKIAKVISEIGSDVTKHAPDIVGLAEIENEAVVRDLINTEYLKRYNYGI 119 Query: 92 FYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGNRRAVELLV 150 H + + A+ +K + +PL KD R + + Sbjct: 120 V--------HYESPDARGVDVALIYKKSVFKPTASFPHPLYLTKDDGKPLYTRDQLLVSG 171 Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 E++G+ I + H S ++ + L++ + + ++ K+ + GD Sbjct: 172 ELDGEMIHFIVNHWPSRFGGEAKSRPSREKAAALNK--KIIDSLLS--KDPNAKVIAMGD 227 Query: 211 FN 212 FN Sbjct: 228 FN 229 >gi|91781509|ref|YP_556715.1| putative metal-dependent hydrolase [Burkholderia xenovorans LB400] gi|91685463|gb|ABE28663.1| Putative metal-dependent hydrolase [Burkholderia xenovorans LB400] Length = 265 Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQRWVQSTHADAYFLQE-----AMARRMPAP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGAPLADPLSDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI K+ P V+AGDFN Sbjct: 170 WIAHWI-AKEAPQGPLVLAGDFN 191 >gi|256395293|ref|YP_003116857.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256361519|gb|ACU75016.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 252 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 42/254 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L + + D D+V LQE+ P + I T+ ++ + Sbjct: 21 LRALAEVLADSDYDVVCLQELS--------LPPSFGLIRSLTKTSFPYAAHGTRLPTVAG 72 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL---------VEINGKKIWVLDIHL 164 + PL+G + A + +++ ++G+ V + HL Sbjct: 73 -------GLLTLSRVPLVGHRYHVVAAPAKWRADVVMRRGVLVARFAVDGEFFTVTNTHL 125 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQW--LKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 + + + QQA+ + I ++ +S P + GDFN + + Sbjct: 126 ----SPNHETDWSQAAPFTRVQQAELARMAQAI-RRIDSGEPVIAVGDFN-----VPRDS 175 Query: 223 DFWKTIDPNDSLI-RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 ++ L F + + D ++ ++ + Sbjct: 176 WLFEGFQAASGLRDAFDGDAATTFRPVPGWDGAAL-DQILVSPGVP----AKAEVVMQEK 230 Query: 282 EDDIKSRGKRLSDH 295 + + LSDH Sbjct: 231 VRMGDGQDRYLSDH 244 >gi|149279400|ref|ZP_01885531.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39] gi|149229926|gb|EDM35314.1| hypothetical protein PBAL39_13817 [Pedobacter sp. BAL39] Length = 275 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 100/318 (31%), Gaps = 67/318 (21%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 IRK L FF + + AQ + + SWN+ + + + + + RT D+ Sbjct: 7 IRKATLFATFFFI-HIVAFAQTISICSWNVKDFGQSKTTAQLQF-IARTIKDF------- 57 Query: 62 KNLDADIVFLQE----MGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHT 112 DIV +QE +G AV ++ W S + ++ + Sbjct: 58 -----DIVAIQEVVAGVGGPKAVIRLHEELNKTGQEWQYSISHGTSGDRYSKE----RYV 108 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 KK + + ++ NR + K + H Sbjct: 109 FFWKSKKLQMIGPAWL-----EKKYNLEINREPYLARFNMGKKTFMIGSFHAIPKSKQPE 163 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK------ 226 E +Y L Q Q ++ GDFN ++ N K Sbjct: 164 TEISYLKFLPALYPQDQL---------------ILCGDFNLSQSHSVFN-PLKKMGYEPS 207 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 I+ SL + K + C A++ P K + +S I + + Sbjct: 208 MINQKTSLRQ--KCINGDCLASEYDNFFYP----------GKGINCKSSGIIPFFQQFSD 255 Query: 287 SRGKRL-SDHCPISIDYD 303 + RL SDH P+ + + Sbjct: 256 FKDARLVSDHVPVFLKFS 273 >gi|50084486|ref|YP_045996.1| putative extracellular nuclease [Acinetobacter sp. ADP1] gi|49530462|emb|CAG68174.1| putative extracellular nuclease [Acinetobacter sp. ADP1] Length = 807 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 101/335 (30%), Gaps = 66/335 (19%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEM-- 74 Q +R+ ++N+ + T +++ + K ++AD+ L E+ Sbjct: 461 GQNIRVAAFNVLNYDNGAEKGFPTDRGATTATEFSRQHQKIVTALKAINADVYGLMEIAN 520 Query: 75 ---GSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 +A+A K + I + R ++ I I K V+ + Sbjct: 521 NGYDEKSAIAYLTKSLGPDWKYI------TPPNMNRLGSDVIAVGILYNAKRVKPVNA-- 572 Query: 129 PLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKS--FCFLDSLENT----YSPS 180 NR + + GK V+ HLKS C D+ Sbjct: 573 ---AVVFDDQSQKNRVTMAQTFQPIHGGKFFTVIPNHLKSKGSCPEDTASTDADQLDGQG 629 Query: 181 C--SLLSQQAQWLKDWI-TQKKESLVPFVI-AGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 C + + L W P ++ GD N D N ++ Sbjct: 630 CWNPTRVKAVEQLIQWAAKNPTRVQQPNILFLGDMN----SYAKEDPILAFEKANYKVLL 685 Query: 237 FPKEKDSRCNANKNLRNKIP----------IDYFVMDQNAYKF--------LIQESFSEI 278 ++ A + ID+ + D N Y+F + + + + Sbjct: 686 NDEKIGQGKQAYSYVFGVSSNALGYGGAGNIDHAIADSNLYRFVKRAFVWHINADEPTAL 745 Query: 279 LYNEDDIKSRGKRL---------SDHCPISIDYDF 304 YNE+ K L SDH P+ +D D Sbjct: 746 DYNEEYKTDEQKTLFYADDAYRSSDHDPVIVDLDL 780 >gi|91776730|ref|YP_546486.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] gi|91710717|gb|ABE50645.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] Length = 251 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 79/228 (34%), Gaps = 39/228 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVA 81 +R+ ++NI +GV+ + R+ + L AD+VFLQE+ Sbjct: 5 IRIATFNI-----HKGVTSFNARFALHEQ-----RELIRKLQADVVFLQEVRDQHIKHSR 54 Query: 82 K--VFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + +P F + +++ K H A+ K V ++ + A S Sbjct: 55 RFSAWPLAGQVEFLADAVWSDYAYGKNSVYPAGHHGNALLSKYPIVKYENI-DISAHQSE 113 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R E+ V + + + +HL F +Q L+ I + Sbjct: 114 QRGMLHG--EIAVPGWHQPLHCICVHL--GLFAGWRR-----------KQIAILRKQIEE 158 Query: 198 KKESLVPFVIAGDFN-------RKINYLGNNDDFWKTIDPNDSLIRFP 238 P VIAGDFN R++ + + + ++ FP Sbjct: 159 VVPKDAPLVIAGDFNDWSMSAGRELVHGLHLQEVFEHHSGGKPARSFP 206 >gi|17227772|ref|NP_484320.1| hypothetical protein alr0276 [Nostoc sp. PCC 7120] gi|17135254|dbj|BAB77800.1| alr0276 [Nostoc sp. PCC 7120] Length = 2348 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 96/335 (28%), Gaps = 57/335 (17%) Query: 15 PCTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-------LDA 66 T V +++ S+N +N + S + + +R + T + + L+A Sbjct: 1733 ATTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQREKTIAAILGLNA 1792 Query: 67 DIVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKN 120 D+V L E+ + A+ + T IN D I + + Sbjct: 1793 DVVGLIEIENDGYGANSAIQDLINGLNAVAGAGTYAFINPGLSQLGTDAIAVGFIYKPNS 1852 Query: 121 VRVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDI--HLKS-FCFLDSLENT 176 V + + + + NR+ + N + H KS + + Sbjct: 1853 VTPVGVAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSSGNPGDA 1912 Query: 177 YSPSCSLLS-----QQAQWLKDWITQK--KESLVPFVIAGDFNR---------------- 213 + LS + +Q L W+ + ++I GD N Sbjct: 1913 DAGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPIRALENAGYN 1972 Query: 214 ----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 Y D W +D + + + + N +DY Sbjct: 1973 NLLPNTTYSYVFDGQWGALDHALANASLASQVSTAVKWHINADEPNVLDY---------- 2022 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +F + R SDH P+ + + Sbjct: 2023 --NTNFKSVGQQTSLYSPDAFRSSDHDPVIVGLNL 2055 >gi|118579337|ref|YP_900587.1| endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] gi|118502047|gb|ABK98529.1| Endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] Length = 354 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 90/311 (28%), Gaps = 81/311 (26%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 +S A +R+++WN+ S R L+ + DIV Q+ G Sbjct: 98 SSTATPLRVMTWNVKYCS-------------RGKLAQQALKDDIARANPDIVLFQDAGGV 144 Query: 78 --NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 A+ F W + + IA R + + + Sbjct: 145 MQGALGSYF--AKW--------------HFHSQEQFV-IASR---FPLEETEILPISRPS 184 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLENTY-----------SPSC 181 + R V++ + + +IH +S + Sbjct: 185 GKQKTFARYRVKI----GSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNV 240 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPNDS 233 S+ QA+ ++++I+Q P +I GD N + G +D F + Sbjct: 241 SIRLSQARMVQEFISQ---EKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGY 297 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + + ID+ +M + + ++ S Sbjct: 298 TYGHFLLQRRLPWMRVS---WMRIDHVMMSSH--------------FKALGCRTGTGEAS 340 Query: 294 DHCPISIDYDF 304 DH P+ D F Sbjct: 341 DHRPVIADLLF 351 >gi|312074101|ref|XP_003139819.1| endonuclease/Exonuclease/phosphatase [Loa loa] gi|307765020|gb|EFO24254.1| endonuclease/Exonuclease/phosphatase [Loa loa] Length = 345 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 84/248 (33%), Gaps = 59/248 (23%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + ++SWNI+ L E N R +T + + AD+VFLQEM + Sbjct: 103 SLTVMSWNIDGLDES-------NLTIR----FTAVCYIISKISADVVFLQEMTPDLVPQI 151 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + I +T N T + ++ + ++ P + + Sbjct: 152 RKNLGG-EYSILVAT----------PNLPYFTVVLLKPFIELISHKAIP-------YGCS 193 Query: 141 GN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G R + +G K+ +L+ HL+S + T C + L +W Sbjct: 194 GMGRSMQLVETSAHGHKMMLLNTHLESMKEHSDVRLTQIQEC------FEQLTEW----- 242 Query: 200 ESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 + ++ GD N + + +G P KD+ A + K D Sbjct: 243 DDGKTIIVFGGDLNARDSEIGE---------------LPPGFKDAWVAAGSKPKFKFTWD 287 Query: 259 YFVMDQNA 266 + D A Sbjct: 288 TLLNDNKA 295 >gi|254418698|ref|ZP_05032422.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196184875|gb|EDX79851.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 298 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 88/297 (29%), Gaps = 43/297 (14%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 + A + VRL+S+NI + + + + + + D D++ +QE Sbjct: 30 LTAPADAPRSVRLMSYNIRYDAPDDTPNWLQRRPH--------MARQIAFFDPDVLGVQE 81 Query: 74 MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---PL 130 + + + + T R + V Q+ P Sbjct: 82 ALIPMVAYLADQAPAYDHYGVGRDDGAQAGETT-----TLFWRRARFEAVSTQTLWCSPT 136 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDI---HLKSFCFLDSLENTYSPSCSLLSQQ 187 A R V +V + +LD+ H+ D + C+ L+ Sbjct: 137 PDRPSKGWDAALPRTVTRVVLRDRASGRLLDVRNAHM------DHVGAVAREQCAALAAD 190 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN---DSLIRFPKEKDSR 244 + + V+ GDFN + + ++ P + Sbjct: 191 LAP-----ATVEGATAAVVLMGDFNAGPDTAPYRRVLAAGLRDARAVSPVVFGPAGTYND 245 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ++ + + ID+ + S Y G+ +SDH P+ +D Sbjct: 246 FDIARD-NDGVAIDHVFV---------APGLSVERYGVPTDSFSGQVISDHFPVVVD 292 >gi|149376400|ref|ZP_01894162.1| Metal-dependent hydrolase [Marinobacter algicola DG893] gi|149359241|gb|EDM47703.1| Metal-dependent hydrolase [Marinobacter algicola DG893] Length = 286 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 93/290 (32%), Gaps = 58/290 (20%) Query: 24 VRLVSWNIN---TLSEQEGV---SLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGS 76 +RL+++NI S S R L + A L + D+V LQE Sbjct: 38 IRLLTFNIQVGINTSSYRHYFTRSWQHFLPHRNR--IQNLDRIATLLSNYDVVALQECDG 95 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + + I + + N + + ++ L Y L K+ Sbjct: 96 GSLRSGYINQVQY---LAEASGIPYWYQQLNRN----LGQLAQHSNGLLSRYRPLDVKEH 148 Query: 137 FSRA--GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 R A+ + ++ +HL S S +QQ Q + Sbjct: 149 RLPGLIPGRGAIIARYGAEEDPLVLVMMHL---------------SLSKAAQQRQL--AY 191 Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I V+ GD N L +N + +L+ P+ ++ + R + Sbjct: 192 IQALISEYQHVVLMGDLNNHAEELLSNTPL-----KHSNLVPLPETA----HSFPSWRPE 242 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +D+ ++ + L + Y SDH PI++D Sbjct: 243 RALDHILVSPS----LEIRRSEVVSYPV----------SDHLPIAMDIKL 278 >gi|288554501|ref|YP_003426436.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] gi|288545661|gb|ADC49544.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] Length = 265 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 51/251 (20%) Query: 67 DIVFLQEMG---SYNAVAKVFPKNTWCIFYSTE--RLINHSKRDSNNDIHTAIAVRKKNV 121 D++ LQE+ + V + + + L + H V ++ + Sbjct: 35 DVIALQEVSQHRDQDVVEGQIKADNYGYILQKKLKELGSAPYEMVWAPCHYGYEVFEEGI 94 Query: 122 RVLQQSYPLLGAKDSF-------SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 +L +P++ + D + +R V L+EI+ K I HL + D+ E Sbjct: 95 ALL-TRHPIIESTDFYVTKSREMKNWKSRNIVGALIEIDNKPIHFYSCHL--GWWEDTEE 151 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 Q L + Q F+ GDFN N+ ++ + + N Sbjct: 152 PARG--------QMDAL---LEQIPADGRVFL-MGDFN---NHADMRNEGYDYLIQNGFY 196 Query: 235 IRFP------KEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 F +NK I ID + +Q +++ I Sbjct: 197 DTFTLADEKDSGVTVEGKIAGWDQNKRGIRIDLILTNQ-----------KVNVFSSKVIF 245 Query: 287 SRGKR--LSDH 295 + R +SDH Sbjct: 246 NGRNRDIVSDH 256 >gi|315037288|ref|YP_004030856.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112] gi|312275421|gb|ADQ58061.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112] Length = 367 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 89/273 (32%), Gaps = 50/273 (18%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K + D + QE+ +++ + N + + +H ++ + + A + + Sbjct: 114 KKQNPDFMLFQEIDTHSTRSHYV--NQVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHG 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-----------------NGKKIWVLDIHL 164 V Q + S + V GK++ V++ H+ Sbjct: 172 SV-QSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHM 230 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNND 222 + D Q + L I + ++ ++ GDFN + L + D Sbjct: 231 SA---YDKGGKMR-------KAQMKILSKVIEAEYKAGNYVIVGGDFNHALGRDMLTHFD 280 Query: 223 DF-----W------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 W K + + +++ + + +++ + ++Y + F+I Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDG---FII 337 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + R +DH P+ + + Sbjct: 338 SKNIKAKATDINT----DYRYADHNPVRLGFSL 366 >gi|295425006|ref|ZP_06817715.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] gi|295065324|gb|EFG56223.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] Length = 367 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 89/273 (32%), Gaps = 50/273 (18%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K + D + QE+ +++ + N + + +H ++ + + A + + Sbjct: 114 KKQNPDFMLFQEIDTHSTRSHYV--NQVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHG 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-----------------NGKKIWVLDIHL 164 V Q + S + V GK++ V++ H+ Sbjct: 172 SV-QSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHM 230 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNND 222 + D Q + L I + ++ ++ GDFN + L + D Sbjct: 231 SA---YDKGGKMR-------KAQMKILSKVIEAEYKAGNYVIVGGDFNHALGRDMLTHFD 280 Query: 223 DF-----W------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 W K + + +++ + + +++ + ++Y + F+I Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDG---FII 337 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + R +DH P+ + + Sbjct: 338 SKNIKAKATDINT----DYRYADHNPVRLGFSL 366 >gi|294507988|ref|YP_003572046.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294344316|emb|CBH25094.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 528 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 92/320 (28%), Gaps = 59/320 (18%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A A +R++S+N ++E +++ + + R+ + ++ QE+ Sbjct: 232 APTASALRMLSYNSVNDFDREQSAIFFETRQ------PSFRRIFDATNPGVIAFQEVYDQ 285 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 A + + + ++ VL YP+L Sbjct: 286 TA---------DQVAAVADEALGLPDEWDW--------AKQGQDLVLGSRYPILDTHTIP 328 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWIT 196 N LL + +L +++ C + + PS + QQ + ++ Sbjct: 329 GYENNVSGAFLLDADDALGTDLLVVNMHPPC-CNYGPDDGEPSRNAQRQQVVDGVVAFLR 387 Query: 197 QKKESLVPF--------VIAGDFN--------RKI-----------NYLGNNDDFWKTID 229 + K+ PF V+ GD N R + D + Sbjct: 388 EVKQGDGPFDVPPKTPIVVLGDMNFVGDAQQPRTLRTGEIVYTDRYGPPAAPDWDGSPLL 447 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + + +DY + + + + + D + G Sbjct: 448 DTRPRQVASPLHTTWIAPGSSFP-PGRLDYAFVTDSVLEVVHEFVLHTPALPADVRSAHG 506 Query: 290 KR------LSDHCPISIDYD 303 R SDH P+ ID Sbjct: 507 LRADDTPTASDHLPVVIDVT 526 >gi|118497430|ref|YP_898480.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida U112] gi|195536121|ref|ZP_03079128.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida FTE] gi|118423336|gb|ABK89726.1| exodeoxyribonuclease III [Francisella novicida U112] gi|194372598|gb|EDX27309.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida FTE] Length = 262 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 85/276 (30%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 24 FKTQDVDFLCIQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 72 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 122 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 123 YKM---QFLEKYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES D R SDH P++I YDF Sbjct: 234 KVVPES---------DYIYRENWFSDHAPLTISYDF 260 >gi|94957778|gb|ABF47139.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus neoformans var. neoformans] Length = 529 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 69/216 (31%), Gaps = 30/216 (13%) Query: 32 NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCI 91 L + + K+ R + Y + DIV LQE+ + K + + Sbjct: 17 EFLHPRGLAIVSKDRRTR----IHAIADYLASSSYDIVCLQEL----WIYK-----DYEV 63 Query: 92 FYST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAKDSFSRAGNRR----- 144 +R + S+ + + +A+ + + + P L + + AG+ Sbjct: 64 VREAVQRNLPFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAA 123 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 A +++ ++ + + H+ + + + Q+ L + + Sbjct: 124 ANVVILHPVLGEVEIWNTHMHA---AGEHPPDTRQAHRI--AQSWELANAVRGGAAKGRY 178 Query: 205 FVIAGDFNRK-----INYLGNNDDFWKTIDPNDSLI 235 + GDFN + I + ++ + Sbjct: 179 VFVMGDFNSQPWSIPIAMMRDHAQLMDSFGQVHPST 214 >gi|303230575|ref|ZP_07317328.1| endonuclease/exonuclease/phosphatase family protein [Veillonella atypica ACS-049-V-Sch6] gi|302514768|gb|EFL56757.1| endonuclease/exonuclease/phosphatase family protein [Veillonella atypica ACS-049-V-Sch6] Length = 386 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 K+R+ S+NI S ++ V +S R D ++ + + + DI+ LQE+ A+ Sbjct: 2 KIRIGSFNIEKFS-RQSVYCNDDSESR--KDIKMIAKIIRENNFDIIALQEVFHPEALK 57 >gi|46581661|ref|YP_012469.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|46451084|gb|AAS97729.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|311235301|gb|ADP88155.1| exodeoxyribonuclease III [Desulfovibrio vulgaris RCH1] Length = 257 Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 78/303 (25%), Gaps = 74/303 (24%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 RLVSWN+N W + AD+V LQE K Sbjct: 4 RLVSWNVNGFRAVSSKPEW---------------NWFSTTTADVVALQE-------TKAD 41 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P S + + ++ +AV ++ + D R R Sbjct: 42 PAQVGEEHRSPDGWHAWWLPATVKKGYSGVAVFSRHTPLDVA----YDLPDERFRGEGR- 96 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 + + + +I+ + + + A+ L P Sbjct: 97 ----CLHLTFPEFHFFNIYFPNGGMGEERLRYKMGYYEAFLEHAETL--------RRDRP 144 Query: 205 FVIAGDFN--RK---INYLGNNDDF----------WKTIDPNDSLIRFPKEKDSRCNANK 249 V+ GDFN + + N+ + F + + Sbjct: 145 IVVCGDFNTAHRPIDLARPKENETVSGFLPEERAWMDRFVAAGYVDTFRHVRGDEADRYS 204 Query: 250 NLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 K IDYF + + + D SDHCP+ + Sbjct: 205 WWSYKTRARARNVGWRIDYFFVSEELRGAVR-----------DAWIEMDVMGSDHCPVGL 253 Query: 301 DYD 303 + + Sbjct: 254 ELE 256 >gi|326430956|gb|EGD76526.1| hypothetical protein PTSG_07643 [Salpingoeca sp. ATCC 50818] Length = 291 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 85/277 (30%), Gaps = 67/277 (24%) Query: 64 LDAD-IVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 +++D I+ LQE+ ++ K +F K + T + +A+ Sbjct: 44 MESDSIICLQEVD-HSWFGKFVLLFEKEGYTFVPVTYSPL------------LGVAIAFP 90 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK--SFCFLDSLENTY 177 R+ + S + R + + L +HL S D TY Sbjct: 91 RARI---GDLIPDCIGVRSISKLR---DSTITAKRCWNVALQVHLTRSSGKGQDFAVTTY 144 Query: 178 SPSCS-----LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP-- 230 C +++ L W + +P+++AGDFN + D + I Sbjct: 145 HMPCKFREPHVMAMHCSMLVKWAHN-TANSLPYIVAGDFN-----IKPKDPCYDMIVNGF 198 Query: 231 ---------NDSLIRFPKEKDSRCNANKNLRNKIP------------IDYFVMDQN--AY 267 F + + +A + + P +DY + Sbjct: 199 IHPEVKGALATPAATFNEVPKALRSALREHHGREPEFTNWTHEFQDTLDYIFLSDEWVVR 258 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ESF E Y + + +SDH P+ D Sbjct: 259 DACDPESFPEGPYPSERV------VSDHIPLWATLDL 289 >gi|325955766|ref|YP_004286376.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC] gi|325332331|gb|ADZ06239.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC] Length = 367 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 89/273 (32%), Gaps = 50/273 (18%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 K + D + QE+ +++ + N + + +H ++ + + A + + Sbjct: 114 KKQNPDFMLFQEIDTHSTRSHYV--NQVNLVEHAFKNYDHVFANNFHSAYLAWPLYDPHG 171 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-----------------NGKKIWVLDIHL 164 V Q + S + V GK++ V++ H+ Sbjct: 172 SV-QSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGGKELIVINSHM 230 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN--YLGNND 222 + D Q + L I + ++ ++ GDFN + L + D Sbjct: 231 SA---YDKGGKMR-------KAQMKILSKVIEAEYKAGNYVIVGGDFNHALGRDMLTHFD 280 Query: 223 DF-----W------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 W K + + +++ + + +++ + ++Y + F+I Sbjct: 281 HQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDG---FII 337 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ + + R +DH P+ + + Sbjct: 338 SKNIKAKATDINT----DYRYADHNPVRLGFSL 366 >gi|242775749|ref|XP_002478702.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] gi|218722321|gb|EED21739.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] Length = 1124 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 49/272 (18%) Query: 68 IVFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--------AIA-- 115 +V QE+ S + P+ S + +N N+ + A Sbjct: 647 VVAFQEIVELSPQQIMSTDPRPRMTWENSVKNCLNDYADRMGNNRYVLLRSGQLVGAALL 706 Query: 116 --VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 VR+ + ++ + AGN+ + +E + KI ++ HL + F + Sbjct: 707 VYVREDALSDIKNVEGSVKKTGLSGMAGNKGGCAIRLEYSNTKICLVTAHLAAG-FANY- 764 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + + +S L+ + E + GDFN +I N + + I N+ Sbjct: 765 -DERNRDYATIS---GGLRFRYNRSIEDHDAIIWLGDFNYRIGL--ENQEVRQLIKKNEF 818 Query: 234 LIRFPKEK------DSRCNA---------NKNLRNKIPIDYFVMDQNA-------YKFLI 271 + ++ R + + D + A Sbjct: 819 SRLYDHDQLNLQMLAGRTFPFYSEGLIRFPPTYKYDLGTDNYDTSDKARIPAWCDRVLWK 878 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +I Y D+K+ SDH P+S +D Sbjct: 879 GGCLKQIDYAAADLKT-----SDHRPVSSLFD 905 >gi|302505072|ref|XP_003014757.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371] gi|291178063|gb|EFE33854.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371] Length = 601 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 14/100 (14%) Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD L D + P+ + + + IDY + N Sbjct: 208 GD-THDTETLPVLRDLCREFHPSRTGMYTCWNQKVNARPG---NYGSRIDYILCSDNIRS 263 Query: 269 FLIQESFS---------EILYNE-DDIKSRGKRLSDHCPI 298 + ++ + E++Y ++ ++ SDHCP+ Sbjct: 264 WFVESNIQEGLIVCVKLELIYRSFKNLLISNEQGSDHCPV 303 >gi|120586985|ref|NP_001073361.1| hypothetical protein LOC317628 [Rattus norvegicus] gi|119850781|gb|AAI27531.1| Similar to apurinic/apyrimidinic endonuclease 2 [Rattus norvegicus] gi|149031345|gb|EDL86343.1| rCG38932, isoform CRA_a [Rattus norvegicus] Length = 516 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 102/327 (31%), Gaps = 74/327 (22%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG---SYNA 79 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLAGQEPSNSPT-----ALRRVLDELDADIVCLQETKVTRDVLT 56 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNVRV---LQQSYPLLGAKD 135 + F + +S + D T +A + V L G D Sbjct: 57 EPLAIVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNTD 116 Query: 136 SFSRAGNR-----RAVEL------LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 F++ R L +E K + +++++ C + P Sbjct: 117 EFTQEELRVLDSEGRAFLTQHKIRTLEGKEKTLTLINVY----C---PHADPGKPERLTF 169 Query: 185 SQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGN-----------NDDFWKTID 229 + + L+ + +I GD N R I++ + Sbjct: 170 KMRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLS 229 Query: 230 PNDS-------------LIRFPKEKDS-RCN----ANKNLRNKIPIDYFVMDQNAYKFLI 271 + PK++ + C ++L +DY + D++ Sbjct: 230 NPGNEAGPHIGHFMDSFRYFHPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRSLVIDTF 289 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 Q SF SDHCP+ Sbjct: 290 QASF----------LLPEVMGSDHCPV 306 >gi|332183996|gb|AEE26250.1| Exodeoxyribonuclease III [Francisella cf. novicida 3523] Length = 262 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 69/275 (25%) Query: 61 AKNLDADIVFLQEMGSY----NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D D + +QE + + FP + F +D+ ++ A+ Sbjct: 24 FVTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDF-----------KDAVKKGYSGTAI 72 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + L D R ++ + +K + ++L S D + Sbjct: 73 YAKKKPLKVIKELGLDWADDEGR---------YIQFDYQKFSIASLYLPSGSSGDVRQEY 123 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 124 KM---QFLKRYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGVL 174 Query: 237 FPKEK-------------DSRCNANKNLRNKI--------------PIDYFVMDQNAYKF 269 ++ R N+ L+ IDY + Sbjct: 175 PEEQAWLDHIFDDLGWVDTFRVINNEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDK 234 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ +S + +Y E+ SDH P++I YDF Sbjct: 235 VVPKS--DYIYKENWF-------SDHAPLTISYDF 260 >gi|117618538|ref|YP_855175.1| endonuclease/exonuclease/phosphatase family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559945|gb|ABK36893.1| endonuclease/exonuclease/phosphatase family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 371 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 94/294 (31%), Gaps = 52/294 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS------ 76 ++++ S+N+ L + + +R LL +Y K DA + LQE+ Sbjct: 106 RLKVASYNVWAL-----PVIAASIGER----LALLPEYLKGYDA--LLLQEVFDGRREGF 154 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A+AK +P + + +N +D I R VR Q YP D Sbjct: 155 LQALAKEYP---YQTRVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQCTGTDC 205 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ----QAQWLK 192 F+ G A + GK + H SF + L Q Q + L Sbjct: 206 FADKGVMYAEVIK---GGKAWHLFATHTASF---------DTDEARRLRQIQFGQIRTLA 253 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTIDPNDS-------LIRFPKEKDSR 244 + K + + GDFN ++ ++ ++ P+ Sbjct: 254 A--SLKIPASDTVIYGGDFNVNKRKFADDYAGMLANLNADEPGYGGYTEATFDPRINPYA 311 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 N +DY V + + I + D LSDH P+ Sbjct: 312 GGPLSGGANVEYLDYLVASREYGAVCHNLNSVWIPRSSDGSLWPASNLSDHFPV 365 >gi|194292124|ref|YP_002008031.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|193226028|emb|CAQ71975.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 293 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 39/214 (18%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A+ ++ +VS+NI V + + LDADIV LQE+ Sbjct: 34 PTRAAGLAQMTVVSYNI-----HRAVGTDRRYRP------QRIAAVLAELDADIVALQEV 82 Query: 75 GSYNA----VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 S ++ + + + + R+ D N + T A + Sbjct: 83 ESGSSNDHTLEFLAGETGMHVVSGFTRV--RGTVDYGNALLTRFA-------PEAVNQID 133 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 L K R V + V+ HL + Q Q Sbjct: 134 LTVKGCEPRGAIDAIVTCTASGCANPLRVIATHL--GLRPGERRH-----------QVQQ 180 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 L +++ +P ++ GD N + Sbjct: 181 LLNYVAT--APPLPTILLGDVNEWFLWGRPLRWL 212 >gi|145351399|ref|XP_001420068.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580301|gb|ABO98361.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 371 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 2/61 (3%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 ++ + SWN N L + + + R T L + D++ LQE Sbjct: 4 AFTVEDASEPLSFASWNANGLLNR--IRDKSDPNGRRTRALLALSENVMRKRPDVIALQE 61 Query: 74 M 74 + Sbjct: 62 V 62 >gi|310818603|ref|YP_003950961.1| hypothetical protein STAUR_1330 [Stigmatella aurantiaca DW4/3-1] gi|309391675|gb|ADO69134.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 245 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 14/158 (8%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 AD++ QE+ + +K+ + F + D+ N I AI+ RK Sbjct: 53 ADVIGWQEVDTDAGHSKLGALEYYDHF-----RPGEGRLDARNSI--AISWRKN-KYEKT 104 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L +R ++++ G K+ ++ H S + Sbjct: 105 GDGSRLTHGGEAGVTPSRFVNWVVLKNKDTGAKLAFINTHYISGAWNGEHPERQER---- 160 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +++ + +P V+ GDFNR ++ Sbjct: 161 WQTHNAVVREVVADLLSRGLPVVLVGDFNRPLSQDIPG 198 >gi|296160793|ref|ZP_06843606.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1] gi|295888885|gb|EFG68690.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1] Length = 265 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++Q+ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQQWVQSTHADAYFLQE-----AMARRMPAP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGAPLADPLNDVWHCQATEIARALELEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI K+ P V+AGDFN Sbjct: 170 WIAHWI-AKEAPQGPLVLAGDFN 191 >gi|270294111|ref|ZP_06200313.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275578|gb|EFA21438.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 361 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 68/306 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI G + S K + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNI----HNFGGEITGYSCK-------EIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP + S R+++H +V+ + YPL + Sbjct: 147 SD----FPTD------SIRRVLSHWSHALIPSED---SVKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------------TYSPSCS 182 + + ++ V + I +++ HL++ + Sbjct: 194 YQQSSNCSMMCDVAMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 183 LLSQQA--QWLKDWITQKKESLVPFVIA--GDFN---RKINYLGNNDDFWKTIDPNDSLI 235 L + + + ++ P+ + GDFN Y + Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHHLRKTLKDGFRTAGNGY 313 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + + IDY S I Y D+ SDH Sbjct: 314 MYTY---------RYAKRMLRIDYIF---------HSPSLKGIAYYSPDLDLC----SDH 351 Query: 296 CPISID 301 P+ ++ Sbjct: 352 NPVIME 357 >gi|284035454|ref|YP_003385384.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74] gi|283814747|gb|ADB36585.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74] Length = 254 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 42/253 (16%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 DI+ QE+ A V + + + + + ++ +A K Sbjct: 29 DILCFQEV---KATTDVVDLSVF-----EQLGYQYHWHAAEKKGYSGVATFSKIAPTNVV 80 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 L D R ++ + + +L+ + S + + Q Sbjct: 81 LGCGLPVYDCEGR---------ILRTDFGDLTLLNCYFPSGTTGEVRQGVKMEFLRDFYQ 131 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q L+ ++ + ++ GD+N N + +D + N + + Sbjct: 132 FVQELR---KERPK----VIVVGDYNIAHNAIDIHDPV---RNKNTTGFLPEERAWMDSW 181 Query: 247 ANKN----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRG----KRL---- 292 R K P D Y A + + + D L Sbjct: 182 FGSGMTDGFRYKHPTDVAYSWWSYRAGARTNNKGWRIDYASLTDNLRDRIIDCAMLPDAV 241 Query: 293 -SDHCPISIDYDF 304 +DHCP+ ++ D Sbjct: 242 HADHCPVCLNLDL 254 >gi|170764194|ref|ZP_02634166.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] gi|170660566|gb|EDT13249.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] Length = 262 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 12/106 (11%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPID 258 P++I GDFN + D+ + I N++ + K D Sbjct: 165 KTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYD 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++D L + + N DD K SDH P+ + + Sbjct: 220 GRIID----YILYSKEYEIKSLNIDDRKINRGYPSDHYPVICELEL 261 >gi|47567194|ref|ZP_00237908.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47556037|gb|EAL14374.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 263 Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 30/224 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + NGK I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNGKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L + +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKGQVNRL----MEHVDSNEISFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFV 261 ++ +D+ ++ + + ++ + ID + Sbjct: 186 EYMMQKGLHDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLIL 229 >gi|256827653|ref|YP_003151612.1| endonuclease/exonuclease/phosphatase family protein [Cryptobacterium curtum DSM 15641] gi|256583796|gb|ACU94930.1| endonuclease/exonuclease/phosphatase family protein [Cryptobacterium curtum DSM 15641] Length = 373 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 85/278 (30%), Gaps = 55/278 (19%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI---- 114 K L+ D +QE+ + + + F N F S + A Sbjct: 114 AILKRLNPDFALIQEVDTDS--DRSFHVNQKQSFIEAFPSDGSSFVSDFHSAFLAYPLTE 171 Query: 115 ---AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----------NGKKIWVLD 161 AV + + + + S+ G+ A ++ NG + +++ Sbjct: 172 PHGAVESGLLTLSRAHISS-AVRRSYPVDGSFPAKYFDLDRCFEVMRIPVQNGHDLVLIN 230 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 H+ + Y + +QQ + + + + ++ + GD+N + G+ Sbjct: 231 SHMSA----------YDKGGKIRAQQLALIGNIMKAEYDTGNYVICGGDWNHALA--GSE 278 Query: 222 D--------DFWKTIDPNDSLIRFPKEKD-------SRCNANKNLRNKIPIDYFVMDQNA 266 D W +I + L + C K +D Sbjct: 279 DIYPSKQQVPPWVSILDDADLPTGFSIVKADNLSEVASCRGCDIPYEKGVTYTTTVDG-- 336 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 F+I ++ N D + SDH P+ + ++ Sbjct: 337 --FIISDNVQAYAENIDCGFTY----SDHNPVKLTFEL 368 >gi|149047282|gb|EDL99951.1| rCG36041 [Rattus norvegicus] Length = 485 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 102/327 (31%), Gaps = 74/327 (22%) Query: 24 VRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81 +R+VSWNIN + +G+ S T LR + LDADIV LQE S +A+ Sbjct: 2 LRVVSWNINGIRRPLQGLGCEVTSNCPT-----ALRHILRELDADIVCLQETKVSRDALT 56 Query: 82 K--VFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNV--------------RVL 124 + + F + +S + D T +A + + Sbjct: 57 EPLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMN 116 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + L A DS RA + E K + +++++ C S N Sbjct: 117 EFTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVY----CPHASPGNHERL---TF 169 Query: 185 SQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGNN--------------DDFWK 226 + + L+ + +I GD N I++ D Sbjct: 170 KMRFYRLLQIRAEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLS 229 Query: 227 TIDPNDSLIRFP-----------KEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ P +E+ C ++L +DY + +I Sbjct: 230 NLEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYIL---GNRDLII 286 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 +D SDHCP+ Sbjct: 287 DT-------LQDAFLLPEVMGSDHCPV 306 >gi|189464427|ref|ZP_03013212.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] gi|189438217|gb|EDV07202.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] Length = 277 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 90/308 (29%), Gaps = 45/308 (14%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L Q + ++++NI + + + WK R + ++ Y Sbjct: 4 LILFGSCKDQPTQNEQPLEVMTFNIRLDAPSDSANNWKY---RKDNVCKMIAYY----QP 56 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKR----DSNNDIHTAIAVRKKNVR 122 D++ +QE+ + + D T V N Sbjct: 57 DLLGMQEVCHNQMEDLKLGLPQYTALGVGRDDGKEAGEYCPVFFKTDRFT--LVEHGNFS 114 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVE--INGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + +Q P + + NR +++ +GKK+ + HL D+ T Sbjct: 115 LSEQ--PETIGVRGWDASYNRITTWAILQKKSDGKKLVFFNTHL------DNDGKTARKE 166 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 L L I + +P +I GDFN + +T++ + Sbjct: 167 GVQL-----ILNK-IKE-TAPHMPAIITGDFN-----CTPGEAPLQTLEKGG------MK 208 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFL----IQESFSEILYNEDDIKSRGKRLSDHC 296 S+ + D+ + L + Y LSDH Sbjct: 209 NTSKVATVMYGPSWSFHDFGRLPMEKRVLLDYVFVTNGTKTDRYRVIQDTPENGFLSDHN 268 Query: 297 PISIDYDF 304 P+ ++ Sbjct: 269 PVLVNITL 276 >gi|254303301|ref|ZP_04970659.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323493|gb|EDK88743.1| possible endodeoxyribonuclease [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 279 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 102/308 (33%), Gaps = 57/308 (18%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + AL F L + S A + + S+NI L +VK+ L Q Sbjct: 9 SVIFALFFGL--SSISSADEAYIASFNI----------LRLGAVKKDIPQTAKLLQGF-- 54 Query: 64 LDADIVFLQEMGSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DIV L E+ + + V ++ W S + + ++ ++ + Sbjct: 55 ---DIVGLVEVINRDGVEELVDELNKQGNEKWDYHISPFGVGSSKYKEYFAYVYK----K 107 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + + + + R +I ++ +H + ++ Sbjct: 108 DKVKFIKSEGF-----YKDGKSSLLREPYGATFKIGNFDFTLVLVH---TIYGNNEAQRK 159 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN-DDFWKTID----PND 232 + + ++ + D+ K ++ IAGDFN + L + +K D D Sbjct: 160 AENFKMVD-----VYDYFQDKDKNENDIFIAGDFN--LYALDESFRPLYKHADKITYAID 212 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 I+ R N D F Q + S + ++ D+ K + + Sbjct: 213 PAIKTTIGTKGRAN---------SYDNFFFSQKYSQEFTGSSG-ALDFSGDNPKLMREII 262 Query: 293 SDHCPISI 300 SDH P+ I Sbjct: 263 SDHIPVFI 270 >gi|120556472|ref|YP_960823.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120326321|gb|ABM20636.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 286 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 46/252 (18%) Query: 54 YTLLRQYAKNL-DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 Y L + A L D+V LQE + + + + + I + + N ++ Sbjct: 72 YENLDRIATLLSQYDVVALQECDGGSLRSGYINQVQY---LAEAAGIPYWYQQLNRNL-- 126 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 + N + + + R A+ + ++ +HL Sbjct: 127 GQIAQHSNGLLSRFRPLDVTEHKLPGLIPGRGAIIARYGDEEDPLVLVLMHL-------- 178 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 S S +QQ Q +I ++ S V+ GD N L Sbjct: 179 -------SLSKSAQQKQL--GFIREQIASYRHVVLMGDMNAHAEQLLTRTPL-----KET 224 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 LI P ++ + R + +D+ ++ + L + Y Sbjct: 225 DLIPLPDTA----HSFPSWRPEKALDHILVSPS----LEIRRSEVVSYPV---------- 266 Query: 293 SDHCPISIDYDF 304 SDH PI++D Sbjct: 267 SDHLPIAMDVAL 278 >gi|322373807|ref|ZP_08048342.1| RgfB protein [Streptococcus sp. C150] gi|321277179|gb|EFX54249.1| RgfB protein [Streptococcus sp. C150] Length = 270 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 46/184 (25%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN------------- 100 + L++ D++ QE+ + V + S + Sbjct: 20 FQTLKKQILKAQYDLICFQEVNQEIETSVVATDAYYHALPSATPIHQDHFVRLLVEKLAE 79 Query: 101 ---------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE 151 + ++ +AV + + + D R AV Sbjct: 80 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQP-LTASEILVSDVDDPTDYHTRRVAVAET-T 137 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--ITQK-KESLVPFVIA 208 ++G+++ V +HL + D Q ++W I ++ K P ++A Sbjct: 138 VDGREVAVASVHLS---WWDKG------------FQ----EEWARIEERFKAIGKPLILA 178 Query: 209 GDFN 212 GDFN Sbjct: 179 GDFN 182 >gi|212694729|ref|ZP_03302857.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] gi|212662708|gb|EEB23282.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] Length = 334 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 71/206 (34%), Gaps = 48/206 (23%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---M 74 + +++LV WN G L K++ + L IV LQE Sbjct: 90 VPDSNQLKLVCWNAE------GFRLNKDT-------LAKAAHSIRILQPGIVCLQERPHT 136 Query: 75 GSYNA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + FP +CI S E + ++ A+ R V + +P Sbjct: 137 NLLAWDTIQAAFPDYPYCIINSRE----------DEILNLAVFSRWPVGNVQEYYFPDSY 186 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK------SFCFLDSLENTYSPSCSLLSQ 186 K + + + G+ + ++HL+ S D L+ + ++ Sbjct: 187 NKMLQAD----------IRMIGQTFRLFNVHLQTTGMNESSSMKDRLQTMRHHAIRR-NR 235 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN 212 QA L + I + S P ++ GDFN Sbjct: 236 QADLLANAIAE---SPYPVIVCGDFN 258 >gi|124010467|ref|ZP_01695106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] gi|123983445|gb|EAY23933.1| endonuclease/exonuclease/phosphatase family [Microscilla marina ATCC 23134] Length = 314 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 65/213 (30%), Gaps = 35/213 (16%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L + +AD++ L E+ A KV K + ++ +++ + I Sbjct: 113 AQLVEQLLRQEADLLALIEVNHRWA--KVLKKGLHKQY-------PYAFVYPVDNLFSGI 163 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ YPL + F+ ++L+ K+ + H+ + + Sbjct: 164 AI--------FAKYPLKNVQYIFNDEPPTVVGDVLLP--QGKVHFISTHISAPILQGRIP 213 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 YS Q + I Q +E P V+ GDFN D T + Sbjct: 214 RRYS--------QMDKIAQQIKQDQEK--PLVLLGDFNAVPWERLIRDFKQSTHMQDTRA 263 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 P PIDY Y Sbjct: 264 SWLPTFPTWALWMGI------PIDYIFYSPPLY 290 >gi|290999631|ref|XP_002682383.1| predicted protein [Naegleria gruberi] gi|284096010|gb|EFC49639.1| predicted protein [Naegleria gruberi] Length = 314 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 S +P++++GDFN +Y+ +D + + + K+ + ++ K P D Sbjct: 214 NSNIPWLLSGDFNAGCSYVKESDWKGIRLRTDSTFKWLIKD-----DQGTMVKTKCPYDR 268 Query: 260 FVMDQNAYKFLIQESFSEILYNEDD--IKSRGKRLSDHCPI 298 FV+ + + E + + E+ ++ + +SDH PI Sbjct: 269 FVIAGS----IDYEKVQVVNFKEEYGLTQALAEAVSDHFPI 305 >gi|109499818|ref|XP_223499.3| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] gi|109500734|ref|XP_001059968.1| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] Length = 516 Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 102/327 (31%), Gaps = 74/327 (22%) Query: 24 VRLVSWNINTLS-EQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVA 81 +R+VSWNIN + +G+ S T LR + LDADIV LQE S +A+ Sbjct: 2 LRVVSWNINGIRRPLQGLGCEVTSNCPT-----ALRHILRELDADIVCLQETKVSRDALT 56 Query: 82 K--VFPKNTWCIFYSTERLINHSKRDSN-NDIHTAIAVRKKNV--------------RVL 124 + + F + +S + D T +A + + Sbjct: 57 EPLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMN 116 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + L A DS RA + E K + +++++ C S N Sbjct: 117 EFTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVY----CPHASPGNHERL---TF 169 Query: 185 SQQA-QWLKDWITQKKESLVPFVIAGDFN---RKINYLGNN--------------DDFWK 226 + + L+ + +I GD N I++ D Sbjct: 170 KMRFYRLLQIRAEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLS 229 Query: 227 TIDPNDSLIRFP-----------KEKDSRCN----ANKNLRNKIPIDYFVMDQNAYKFLI 271 ++ P +E+ C ++L +DY + +I Sbjct: 230 NLEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLDYIL---GNRDLII 286 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 +D SDHCP+ Sbjct: 287 DT-------LQDAFLLPEVMGSDHCPV 306 >gi|66045712|ref|YP_235553.1| exonuclease III [Pseudomonas syringae pv. syringae B728a] gi|63256419|gb|AAY37515.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae B728a] gi|330971266|gb|EGH71332.1| exonuclease III [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 54/192 (28%), Gaps = 41/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++++S+NIN L + L D++ LQE + Sbjct: 1 MKIISFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVSDEQFPQ 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + H +A + + L + + + + Sbjct: 45 AEVEALGYHV------------HFHGQKGHYGVALLSRNAPLALHKGF-----EGDDEES 87 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R + NG+ + +++ F + + + L+ + Sbjct: 88 QKRFIWGTYADSNGQPVTIMN-----GYFPQGESRDHPTKFPAKQRFYENLQTLLEGHFR 142 Query: 201 SLVPFVIAGDFN 212 + P ++ GD N Sbjct: 143 NDQPLIVMGDVN 154 >gi|307130940|ref|YP_003882956.1| exonuclease III [Dickeya dadantii 3937] gi|306528469|gb|ADM98399.1| exonuclease III [Dickeya dadantii 3937] Length = 268 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 90/319 (28%), Gaps = 89/319 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDD---- 40 Query: 82 KVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKD 135 +FP + + +FY H +A + K +++ +P +D Sbjct: 41 -MFPLDEVKQFGYHVFY------------HGQKGHYGVALLTKAEPLAVRRGFPT-DEED 86 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R +++ + L + + F ++ ++ Q L+ ++ Sbjct: 87 AQRR--------IIMADLATPLGTLTV--VNGYFPQGESRDHAVKFPAKTRFYQDLQHYL 136 Query: 196 TQKKESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLI 235 Q ++ P +I GD N I W N L+ Sbjct: 137 EQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLV 196 Query: 236 RFPKEKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + C + ID + D Sbjct: 197 DTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASRCAATGI-------DYA 249 Query: 286 KSRGKRLSDHCPISIDYDF 304 ++ SDH P+ ++ F Sbjct: 250 IRGMEKPSDHAPVWAEFTF 268 >gi|57235078|ref|YP_180859.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] gi|57225526|gb|AAW40583.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] Length = 591 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 35/199 (17%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P + +R++++N++ + D L + ++ AD+V LQE+ Sbjct: 355 PAAPQFSGTLRIMTYNLHN-----------GFNTQGKLDLEALARVIEDSGADVVALQEI 403 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 S V + + +RL H + + A+ K + + L Sbjct: 404 -SRGW---VISGRVDMLEWLAQRLNMHFAFGATAGEYWGNAILSKYPILDTHNVSL---- 455 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD- 193 +S R + ++++ + +++ HL + E QA+ L D Sbjct: 456 ESEGLPIKRGYLNAVLDLGVRYLYLAATHLHH--VPEEGEVRVI--------QAEELADF 505 Query: 194 WITQKKESLVPFVIAGDFN 212 W VI GDFN Sbjct: 506 WHHAPST-----VIMGDFN 519 >gi|238794520|ref|ZP_04638129.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] gi|238726203|gb|EEQ17748.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] Length = 271 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 80/309 (25%), Gaps = 79/309 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFP 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + V ++ + +FY H +A + + + + Sbjct: 47 LEDV-SQHGYHVFY------------HGQKGHYGVA-----LLTKNEPLAVRRGFPTDEE 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + + V++ F + + L+ ++ Q+ Sbjct: 89 DAQRRIIMADIATSNGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQL 143 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPK 239 + +I GD N I W N L+ + Sbjct: 144 SADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLARLQNWGLVDTFR 203 Query: 240 EKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + CN + ID + Q I D Sbjct: 204 AANPECNDQFSWFDYRSRGFDENRGLRIDLLLASQPLATRCIATGI-------DYEIRGM 256 Query: 290 KRLSDHCPI 298 ++ SDH P+ Sbjct: 257 EKPSDHAPV 265 >gi|156839947|ref|XP_001643659.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM 70294] gi|156114279|gb|EDO15801.1| hypothetical protein Kpol_1040p14 [Vanderwaltozyma polyspora DSM 70294] Length = 784 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 91/297 (30%), Gaps = 48/297 (16%) Query: 53 DY--TLLRQYAKNLDADIVFLQEMGS----YNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 DY L+ + +D++ LQE+ S + + FY+ R +DS Sbjct: 481 DYRREKLKDQILSFKSDVICLQEVESKSYEEFWLPLLQKNGYAGTFYAKTRAKTMQTKDS 540 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR-------------RAVELLVE-- 151 I ++ VL + + R A+ + +E Sbjct: 541 KKVDGCCIFYKESEFNVLYKDSVDFSGVWMKHKKFQRTEDYLNRAMNKDNVALYMKLEHI 600 Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL----KDWITQKKESLVPFVI 207 +G+ +WV+ HL + + + +L + L + ++++ P +I Sbjct: 601 KSGESVWVVTTHLH---WDPQFNDVKTFQVGILLDHLEELLKDNNNASSKQEIRKCPVII 657 Query: 208 AGDFNRKIN--------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----N 248 GD N ++ + + F+ + + C N Sbjct: 658 CGDLNSHLDSAVYELLSTGHVQVHKDIENRFYGYMSQKNFAHNLALRSSYDCIGELPFTN 717 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 IDY +A + + Y I + SDH P+ Y+F Sbjct: 718 FTPSFTDVIDYIWYSTHALRVRGVLGPVDKDYVSKFIGFPNDKFPSDHIPLLARYEF 774 >gi|238880020|gb|EEQ43658.1| conserved hypothetical protein [Candida albicans WO-1] Length = 438 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 78/323 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--------DADIVFLQEMG 75 + +W + +S+ LR A L D DIV LQE Sbjct: 23 LTFNTWGLKFISKHRK---------------ERLRAIADALANPKSPDEDYDIVALQE-- 65 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLL 131 ++ + W R +R I + +AV + +P+ Sbjct: 66 -------IWCEEDWQYLDLVCRPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPIN 118 Query: 132 GAKDSFSRAGNRRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 G +F R + V + I +L+ H+ + + +C Sbjct: 119 GRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC---- 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLG--------------------NND 222 QA + K++ + GD N K + Y ND Sbjct: 175 -QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPND 233 Query: 223 DFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEIL 279 +++ SL ++ +DY ++D + + ++ Sbjct: 234 QIATLSLEDQISLAGVTCNSRLNTW-RESRPFWEACRLDYALIDASNITPVSA----QVR 288 Query: 280 YNEDDIKSRGKRLSDHCPISIDY 302 + + SDH S+D Sbjct: 289 FVDKLPPPLSCSYSDHFAYSVDL 311 >gi|67924378|ref|ZP_00517808.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] gi|67853771|gb|EAM49100.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] Length = 262 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 99/308 (32%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N++ ++ + + N D++ LQE + + Sbjct: 1 MKIATWNVNSIRTRQPHVI----------------DWLTNNSIDVLCLQETKVIDKDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + + ++ N R DI T V ++ + Sbjct: 45 QPFEELGYHTYIYGQKAYNGVAIFSRQPMTDIITGFT-----DIVGEEKAQSFDEQKRII 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +++ I ++++++ + L S + Y Q Q LK ++ Sbjct: 100 SG--------VIDD----IRIINVYVPNGASLGSEKYEYK------LQWFQVLKAYLDDL 141 Query: 199 K-ESLVPFVIAGDFN----------------RKINYLGNNDDFWK--TIDPNDSLIRFPK 239 + I GDFN ++ + TI D+ +F Sbjct: 142 ILKEAREVCICGDFNIALDDKDIYNSKGKEKHIMSSPVERETLQNILTIGLKDAFRKFTT 201 Query: 240 EKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 E + RN+ ID+ + Y+ I + D + ++ SD Sbjct: 202 EGGHFSWWDYRSGGFQRNRGWRIDHLYLTHKLYEKAINCTI-------DIEPRKQEKPSD 254 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 255 HTPVILEI 262 >gi|315128102|ref|YP_004070105.1| hypothetical protein PSM_A3040 [Pseudoalteromonas sp. SM9913] gi|315016615|gb|ADT69953.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 887 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 95/336 (28%), Gaps = 81/336 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA------KNLDADIVFLQEMGSY 77 +R+ S+N+ +G + + S+ L+RQ A + AD++ L E+ Sbjct: 461 LRVASFNVLNYFNGDGQGSGFPTSRGADSEVELIRQQAKLVSAISAMQADVIGLMEIE-- 518 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH--TAIAVRK-------KNVRVLQQSY 128 + + F + L+N + + + V K + Sbjct: 519 --------NDGFGEFSAVASLVNALNDADSQNQYAFVDFGVDKIGTDAITTALIYRADKV 570 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIW------VLDIHLKS--FCFLDSLENTYSPS 180 +G + A + + + K + V HLKS C + N Sbjct: 571 QQVGTAAITTDAPFDYSNRAPIAQSFKSLETEEVFTVAVAHLKSKGGCGSATGGNADQND 630 Query: 181 CSLLSQQAQ-----WLKDWITQKKES--LVPFVIAGDFNRKINYLGNN----------DD 223 + + DW+ K ++ GD N Y + + Sbjct: 631 GQACWNEIRTAGANAFADWLNSKPTGVDDEDIILVGDMN---AYAMEDPIRAFADKGLKN 687 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 +D N + + +D+ ++ + ++ + I +E Sbjct: 688 VVAELDGNTLGYSYSFSGRAG-----------SLDHALVSPSLLNKVVSATDWHINADEP 736 Query: 284 DIKSRG-----------------KRLSDHCPISIDY 302 R SDH P+ +D Sbjct: 737 ISLDYNVEFKSDAQQSTLYAQGPYRASDHDPVIVDI 772 >gi|254431951|ref|ZP_05045654.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] gi|197626404|gb|EDY38963.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] Length = 278 Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 94/306 (30%), Gaps = 71/306 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL SWN+N RT + + + +++ LQE ++ Sbjct: 1 MRLASWNVN--------------SVRTR--LEQVTTWLEQERPEVLCLQET---KVADEL 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----KNVRVLQQSYPLLGAKDSFSR 139 FP + + + ++ S + +A+ ++VR+ ++ A+ Sbjct: 42 FPHDAFQ-------ELGYATAISGQKAYNGVAILSLLPLEDVRIGFEALLPGDAEAQELS 94 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R L+ + VL++++ + L S + Y Q L+ ++ ++ Sbjct: 95 TQKRVISALV-----DGVRVLNLYVPNGSALRSEKYAYK------LQWLACLRRYLAVQE 143 Query: 200 ESLVPFVIAGDFN-----RKINYLGN---------------NDDFWKTIDPNDSLIRFPK 239 E P + GDFN R ++ + + L Sbjct: 144 EQGDPLCMLGDFNIGPEDRDLHDPDRLTGGIMASEAERQALREALGDRLTDAFRLFEPEA 203 Query: 240 EKDSR--CNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 S R++ ID+ + + + SDH Sbjct: 204 GHWSWWDYRTGAWDRDRGWRIDHIYLCDTLAACATGCRIHKHT-------RGNVQPSDHA 256 Query: 297 PISIDY 302 P+ ++ Sbjct: 257 PVVVNL 262 >gi|307728210|ref|YP_003905434.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307582745|gb|ADN56143.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 265 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 67/203 (33%), Gaps = 50/203 (24%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SWN+ K + ++++ ++ AD FLQE A+A+ P Sbjct: 21 SWNL-----------HKGRTPLGFQAWQAMQRWVQSTHADAYFLQE-----AMARRMPSP 64 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIA-----------------VRKKNVRVLQQSYPL 130 + S + D + T IA R N + L Sbjct: 65 --VLASSFGAPVTDPLSDVWHCQATEIARALQLEIALGPNVFKPSWRHGNAILSPHPLDL 122 Query: 131 LGAKDSFS-RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G D + R R + G + +L HL + S L +Q Sbjct: 123 GGRWDISAHRFEKRGLLVARATFGGHSVTLLCAHL-----------ALTRSARL--RQMN 169 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 W+ WI+ K+ P V+AGDFN Sbjct: 170 WIAHWIS-KEAPDGPLVLAGDFN 191 >gi|188994512|ref|YP_001928764.1| hypothetical protein PGN_0648 [Porphyromonas gingivalis ATCC 33277] gi|188594192|dbj|BAG33167.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 351 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 101/338 (29%), Gaps = 79/338 (23%) Query: 25 RLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY-TLLRQYAKNLDA----D---IV 69 R++++N+ L + + L + ++ T S Y L+Q A + A D +V Sbjct: 31 RVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWTQSRYNRKLKQVASVIKAVGGPDWPALV 90 Query: 70 FLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + K ++ + I A+ R + + Sbjct: 91 ALVEVENDTVMNNLLSRTPLGKQSYRYVMTNSP--------DKRGIDVALLYRPELFSLD 142 Query: 125 QQ---SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + G ++ +R L G + V H S + Y Sbjct: 143 HKEEYRVHFRGERNRRTRNILHAQGRL---AGGDTLDVFVCHFPSRRGGVRQSDAYRHDA 199 Query: 182 SLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + L + + ++++ PF+ I GD N + +T+ L K Sbjct: 200 ATLLR--TKCNEILSRR---HNPFILIMGDLNSN----PDESPLIETLRAGTVLPEAGKA 250 Query: 241 KD------SRCNANKNLR-------NKIPIDYFVMDQN--------------AYKFLIQE 273 S C ++ +D+ ++ N A ++ Sbjct: 251 GAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPDSRVSYRTGSAKNVVLPY 310 Query: 274 SFSEILYNEDDIKS--------RGKRLSDHCPISIDYD 303 YN I SDH P++ ++ Sbjct: 311 LVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVTAEFT 348 >gi|319902450|ref|YP_004162178.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319417481|gb|ADV44592.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 360 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 92/310 (29%), Gaps = 72/310 (23%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 + +++ ++N+ G + S K + ++ + D++ QE Sbjct: 99 PGGKYLKIATYNVQ----DFGYEVTGYSCK-------EIARFMEREGVDVLCFQEFDDNE 147 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 FP + S R ++H + ++R + YPL G + Sbjct: 148 D----FPMD------SIRRALSHWPYALIPNDD---SIRGVLPMAVFSRYPLSGHRFITY 194 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE---------------NTYSPSCSL 183 + ++ + + I +L+ HL++ + + Sbjct: 195 QGSANCSMMCDIALGTDTIRLLNNHLQTTSVSQKRRKWEREMKADDTRREVHAAKDAAYT 254 Query: 184 LSQQA--QWLKDWITQKKESLVPFVIA--GDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + + + +I P+ + GDFN + ++ + L F K Sbjct: 255 LHENFVKRTEQTYIISYYAKHSPYPVLVCGDFN---SLPSSHTYY--------HLREFLK 303 Query: 240 EKDSRCNANKNLRNKI-----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + IDY + I Y D+ SD Sbjct: 304 DGFRTAGHGYMHTYRYGKGLLRIDYIF---------HSPTLEGIDYYSPDLDLC----SD 350 Query: 295 HCPISIDYDF 304 H P+ ++ + Sbjct: 351 HNPVIMEVGY 360 >gi|297697839|ref|XP_002826049.1| PREDICTED: deoxyribonuclease-1-like 2-like [Pongo abelii] Length = 101 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 7/98 (7%) Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNA 266 GDFN +Y+ D + ++ + N + D V Sbjct: 4 LGDFNADCSYVREQDWAAIRLRSSEVFKWLIPDSADTTVGNSDCAY----DRIVACGARL 59 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + L +S + + E+ + + L SDH P+ + Sbjct: 60 RRSLKPQSATVHDFQEEFALDQTQALAISDHFPVEVTL 97 >gi|289662605|ref|ZP_06484186.1| hypothetical protein XcampvN_05822 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 255 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 64/299 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSD-YTLLRQYAKNLD 65 AS ++ +R+++ NI S KRT+ D L + Sbjct: 1 MNASESRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVG-----E 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE ++ F T + + ++ N + +A + Sbjct: 56 RDIVGLQE-ADPGSLRSGFTNQTH--YLAERAGFDYWSHQPNRRMG-GVASSANGLLSKL 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + R G R + + V HL + + L+ Sbjct: 112 EPVEVQDHA-LPGRIGGRGILLAKFGEGRDGLAVAVAHLSLG---------ANSRMAQLA 161 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ L D ++ GDFN + + SL R + + C Sbjct: 162 FIAELLSD--------HPNAMLMGDFN-----CMADRPEMQ------SLYRHTRLQPPSC 202 Query: 246 NANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ID+ ++ +I+ + ++ SDH + +D Sbjct: 203 EVHTFPSWRPDRAIDHILVSD---SLVIEHT-----------EAIPAAFSDHLAVGMDI 247 >gi|239983300|ref|ZP_04705824.1| exonuclease [Streptomyces albus J1074] gi|291455127|ref|ZP_06594517.1| exonuclease [Streptomyces albus J1074] gi|291358076|gb|EFE84978.1| exonuclease [Streptomyces albus J1074] Length = 259 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 64/301 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE + Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCIQETKTTEEA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + + + +A+ + L G + R Sbjct: 42 FPAD-------ALAELGYESAVRATGRWNGVAIVSRAGLDDVVGG-LPGGPEYDGVEEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + V +++ + + Y Q + L+D + Sbjct: 94 A-----ISATCGPVRVWSVYVPNGREVGHPHFAYK------LQWLKALRDAVADDAAGGR 142 Query: 204 PFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDSRC------------NANKN 250 PF + GD+N + +D D W + P+E+++ K Sbjct: 143 PFAVLGDYN-----IAPHDTDVWDPTAFIGATHVTPEEREALAALRATGLDDVVPRPLKY 197 Query: 251 LRNKIPIDYFVMD-QNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDY 302 + DY + I + + + R SDH P+ D Sbjct: 198 DQPFTYWDYRQLGFPKNRGMRIDLVYGNDPFRAAVSDAYVDREERKGKGASDHAPVVTDL 257 Query: 303 D 303 Sbjct: 258 T 258 >gi|323305214|gb|EGA58961.1| Isc1p [Saccharomyces cerevisiae FostersB] Length = 471 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 34/197 (17%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 TL+ L DY D++ LQE+ W Sbjct: 66 TLTPISDELLPNGGDSNENEDY------------DVIALQEIWCVE---------DWKYL 104 Query: 93 YSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 S +R ++ I T +A+ + +P+ G + R + Sbjct: 105 ASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGKSI 164 Query: 149 ---LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + I +++ H+ + + SC QA I +++ Sbjct: 165 AITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSC-----QAWDFSRLIKLYRQAGYA 219 Query: 205 FVIAGDFNRKINYLGNN 221 ++ GD N + L + Sbjct: 220 VIVVGDLNSRPGSLPHK 236 >gi|190405580|gb|EDV08847.1| inositol phosphosphingolipids phospholipase C [Saccharomyces cerevisiae RM11-1a] gi|256273772|gb|EEU08697.1| Isc1p [Saccharomyces cerevisiae JAY291] gi|259145925|emb|CAY79185.1| Isc1p [Saccharomyces cerevisiae EC1118] gi|323333910|gb|EGA75299.1| Isc1p [Saccharomyces cerevisiae AWRI796] gi|323337923|gb|EGA79162.1| Isc1p [Saccharomyces cerevisiae Vin13] gi|323348959|gb|EGA83195.1| Isc1p [Saccharomyces cerevisiae Lalvin QA23] Length = 477 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 34/197 (17%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 TL+ L DY D++ LQE+ W Sbjct: 72 TLTPISDELLPNGGDSNENEDY------------DVIALQEIWCVE---------DWKYL 110 Query: 93 YSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 S +R ++ I T +A+ + +P+ G + R + Sbjct: 111 ASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGKSI 170 Query: 149 ---LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + I +++ H+ + + SC QA I +++ Sbjct: 171 AITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSC-----QAWDFSRLIKLYRQAGYA 225 Query: 205 FVIAGDFNRKINYLGNN 221 ++ GD N + L + Sbjct: 226 VIVVGDLNSRPGSLPHK 242 >gi|151944728|gb|EDN62987.1| Inositol phosphosphingolipid phospholipase C [Saccharomyces cerevisiae YJM789] Length = 471 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 34/197 (17%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 TL+ L DY D++ LQE+ W Sbjct: 66 TLTPISDELLPNGGDSNENEDY------------DVIALQEIWCVE---------DWKYL 104 Query: 93 YSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 S +R ++ I T +A+ + +P+ G + R + Sbjct: 105 ASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGKSI 164 Query: 149 ---LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + I +++ H+ + + SC QA I +++ Sbjct: 165 AITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSC-----QAWDFSRLIKLYRQAGYA 219 Query: 205 FVIAGDFNRKINYLGNN 221 ++ GD N + L + Sbjct: 220 VIVVGDLNSRPGSLPHK 236 >gi|86141529|ref|ZP_01060075.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] gi|85832088|gb|EAQ50543.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] Length = 285 Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 97/312 (31%), Gaps = 56/312 (17%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 AL+ F +++ + S+NI S +G+++W+ L + Sbjct: 6 SIAFALLLFSSANAQKSKRELVISSFNIRYNSPDDGINIWEQRK-------DWLTHSIRF 58 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 AD++ QE+ + + + + + ++AI +K+ V Sbjct: 59 HQADLIGTQEVTHTQLL-------DMEVLLPNYAHVGIGREGATQGEYSAIFYKKERFEV 111 Query: 124 LQ------QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV--LDIHLKSFCFLDSLEN 175 L P + A + A R L + + + H F + Sbjct: 112 LDSNTFWLSETPDVVASKGWDAALPRIVTWALFKDKHSGVSFFHFNTH-----FDHRGKQ 166 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR--------KINYLGNNDDFWKT 227 S +LL+Q+ + + P ++ GDFN + G D + Sbjct: 167 ARIASAALLTQKIKEITG--------TSPVLLTGDFNSSPKTEAIATLLSSGLKDPY--- 215 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKS 287 ++ + I P+ + + IDY + D + Sbjct: 216 LNLDADQIYGPE-YSANGWDATGRTSDSRIDYIFYSGG---------VQPLTLQILDGQR 265 Query: 288 RGKRLSDHCPIS 299 + +SDH P+ Sbjct: 266 GERYISDHFPVI 277 >gi|323355424|gb|EGA87248.1| Isc1p [Saccharomyces cerevisiae VL3] Length = 477 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 34/197 (17%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF 92 TL+ L DY D++ LQE+ W Sbjct: 72 TLTPISDELLPNGGDSNENEDY------------DVIALQEIWCVE---------DWKYL 110 Query: 93 YSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 S +R ++ I T +A+ + +P+ G + R + Sbjct: 111 ASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGKSI 170 Query: 149 ---LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP 204 ++ + I +++ H+ + + SC QA I +++ Sbjct: 171 AITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSC-----QAWDFSRLIKLYRQAGYA 225 Query: 205 FVIAGDFNRKINYLGNN 221 ++ GD N + L + Sbjct: 226 VIVVGDLNSRPGSLPHK 242 >gi|125381322|gb|ABN41561.1| deoxyribonuclease I-like 2 [Gallus gallus] Length = 237 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 85/262 (32%), Gaps = 46/262 (17%) Query: 54 YTLLRQYAKNLDADIVFLQEM--GSYNAVAKV------FPKNTWCIFYSTERLINHSKRD 105 +LR+Y DIV +QE+ +AV ++ + + S RD Sbjct: 7 INILRRY------DIVLVQEVRDSDLSAVTELLEQLNSVSSSPYDYEISG-----PLGRD 55 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD-IHL 164 + +++ + + + + + +Y +D FSR + + + + +V+ +H Sbjct: 56 NYKEMY--LFIYRTDAVSVADTYQYEDPQDIFSREP--FVLRVSAPHSKAEEFVMVPLH- 110 Query: 165 KSFCFLDSLENTYSPSCSLLSQ-QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 S + L + W V GDFN +Y+ +D Sbjct: 111 -------SAPHDAVAEIDALYDVYLAVVNKW------GTDNIVFLGDFNADCSYVKQSDW 157 Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNE 282 + +D + + D V+ + ++ S + + Sbjct: 158 ASIRLRSSDVFKWLIPDSADTTVGKSDCAY----DRIVVCGAKLKRSIVPNSATVYNFQR 213 Query: 283 DDIKSRGKRL--SDHCPISIDY 302 + + L SDH P+ + Sbjct: 214 AFQLEQEEALAVSDHYPVEVKL 235 >gi|226942361|ref|YP_002797434.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] gi|226717288|gb|ACO76459.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] Length = 286 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 80/277 (28%), Gaps = 61/277 (22%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN 87 SW L G ++ + +D+ D+V LQE+ ++ + Sbjct: 57 SW--QHLLPHAGRAVNLQRIGALLADF------------DLVALQEVDG-GSLR----SD 97 Query: 88 TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE 147 +L N + + + N + + P R A+ Sbjct: 98 YVNQVEHLAQLGNFPYWYQQLNRNLGPLAQHSNGLLSRLR-PSGLEDHPLPGPPGRGAIL 156 Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 L + + V+ +HL ++Q +I + V+ Sbjct: 157 LRLGEGAGSLAVIMMHLALGA-------------RTRTRQL----AYIRELVGDYRHLVL 199 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GD N L + L + ++ + R + ID+ ++ + Sbjct: 200 MGDMNTHARELLEHSPL-------RDLGLLAPQIEATF---PSWRPQRCIDHILLSPS-- 247 Query: 268 KFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + ++ + +SDH P++++ Sbjct: 248 ------------LTLERVQVLPQPISDHLPVAVEIRL 272 >gi|304394302|ref|ZP_07376225.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] gi|303293742|gb|EFL88119.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] Length = 269 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 91/314 (28%), Gaps = 77/314 (24%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 A+ + +WNIN + R L+ ++ D++ LQE+ V Sbjct: 2 AKPFSIATWNIN------------SVRLR----IGLVEKFLAEHQPDVLCLQEI---KCV 42 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 ++FP + + + +A K+ S + D+ Sbjct: 43 NELFPADAFT------AAGYPHHAVHGQKGYHGVATVSKHPLTETASADYVAMGDTRH-- 94 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL-LSQQAQWLKDWITQKK 199 VE +V+ G + + + ++ + + + ++ + L Sbjct: 95 -----VECIVQSPGGPVRMHNFYVPAGGDVADPAVNPKFDHKMKFIEEMKALGC-----D 144 Query: 200 ESLVPFVIAGDFN----------RKI------NYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + VP ++ GD N K + D + + + + Sbjct: 145 DGDVPAILVGDLNIAPLETDVWSHKQLLKVVSHTPVETDGLNEVMAKGGWTDLIRQHIPA 204 Query: 244 RCNANKNLRNKIP----------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK--- 290 + +D+ + S S+I ++ + Sbjct: 205 EDILFTWWSYRSKDWDAADKGRRLDHIWSSPK-----LASSLSKI-----EVLREARGWE 254 Query: 291 RLSDHCPISIDYDF 304 + SDH P+ +DF Sbjct: 255 KPSDHVPVIARFDF 268 >gi|156056543|ref|XP_001594195.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980] gi|154701788|gb|EDO01527.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980 UF-70] Length = 501 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 36/129 (27%) Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---NYLGNNDD------FWKTIDPNDS 233 L +Q L ++I+ L FN + +G D+ W Sbjct: 186 QLKKQKLTLNEYISTPARRL--------FNHLLIGGKVVGERDEGREPQVMWDVCRGFHP 237 Query: 234 LIRFPKEKDSRCNANKNL----RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 ++K C K IDY + ++ ++ + + E G Sbjct: 238 A----RKKMFTCWEQKKNARPGNFGSRIDYILCSEDRKEWFQESNIQE-----------G 282 Query: 290 KRLSDHCPI 298 SDHCP+ Sbjct: 283 LMGSDHCPV 291 >gi|145299881|ref|YP_001142722.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] gi|142852653|gb|ABO90974.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] Length = 268 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 64/277 (23%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + FP + + + H Sbjct: 17 QLQAIIDKHQPDVIGLQEIKVHDEA-----FP-------LADVEAMGYHVEFHGQKAHYG 64 Query: 114 IAV-RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK-IWVLDIHLKSFCFLD 171 +A+ K+ +Q+ +P + RR + + I V++ F Sbjct: 65 VAIMSKQKPVEVQKGFP------TDPEDAQRRMIMATFKREDGSLIKVMN-----GYFPQ 113 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK-------INYLGNNDDF 224 + + + L+ ++ V+ GD N I Sbjct: 114 GENQDHETKFPAKQKFYENLQHYLETHHTPNDQLVLIGDVNISPTDLDIGIGEANRKRWL 173 Query: 225 --------------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP---------IDYFV 261 + + F + C + ID + Sbjct: 174 REGKCSFLPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIM 233 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + D ++ SDH PI Sbjct: 234 ASDALKDTVTETGI-------DYELRGIEKPSDHAPI 263 >gi|332535960|ref|ZP_08411657.1| endonuclease/exonuclease/phosphatase family protein [Pseudoalteromonas haloplanktis ANT/505] gi|332034660|gb|EGI71216.1| endonuclease/exonuclease/phosphatase family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 327 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 36/178 (20%) Query: 69 VFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + QE+ S +++ ++ + + F + AIA + V + Sbjct: 2 IGFQEVFSIDSLKELVGEQGYNYFAVVDT-PEVIDDFIYKRPVVAIASKYPIFEVAAVEH 60 Query: 129 PL-------LGAKDSFSRAGNRRAV----------ELLVEINGKKIWVLDIH-------- 163 L ++ +FSR R + ++ + + + +D H Sbjct: 61 DSELANALGLNSEFTFSRKVLRATITLPHIGNTDCYVVHFKSKRPMINVDEHNKELTPEQ 120 Query: 164 -----LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 LK+ S + L + I +++ + P ++ GDFN ++ Sbjct: 121 NIIEILKANVAGGWGSTIQRGSEATL-----LMIQMIARREATQQPMLLMGDFNNELA 173 >gi|330466603|ref|YP_004404346.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328809574|gb|AEB43746.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 257 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 30/140 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+ G +R L + D++ LQE+ + Sbjct: 2 LRVLTWNVRN-----GGRDSGGPDRRD-----ALLRVIAQTRPDVLALQELRGLD----- 46 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 ++ + S A+ VR + R + Sbjct: 47 ------VTAFAARLGLRPYVAGSWFGQPVAVLVRPTWPVLAAAPV---------RRPFHH 91 Query: 144 RAVELLVEINGKKIWVLDIH 163 A + + + + VL H Sbjct: 92 GAQRVTIGTDAGPLTVLSTH 111 >gi|60680824|ref|YP_210968.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] gi|60492258|emb|CAH07023.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] Length = 285 Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + L C+++ VR+ ++NI + + ++ WK + ++ + Sbjct: 10 VFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKVCEFIREKHP 62 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D++ +QE+ ++ + + + + RK +L Sbjct: 63 DVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDS 116 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 +P K + A R A ++ GK+ +L+ H F Sbjct: 117 NTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTEARR 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + D I + P ++ GDFN + + ++ + Sbjct: 172 NS-------ALLIIDKIKE-IAGTHPAMMTGDFN------VSEEWEAYKTITSNEFVLKD 217 Query: 239 KEKDSRCNANKNLRN----------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 K + + +N + ID+ + A +I + ++ Y Sbjct: 218 AWKIAGKQSGENYTFHDFGRVPVGEREKIDFIFVTPQIKVADAEIISSAITDSTY----- 272 Query: 286 KSRGKRLSDH 295 LSDH Sbjct: 273 ------LSDH 276 >gi|160889855|ref|ZP_02070858.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] gi|156860847|gb|EDO54278.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] Length = 361 Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 68/306 (22%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +++ ++NI G + S K + +Y + D++ QE G Sbjct: 98 TPAGKYLKIATYNI----HNFGGEITGYSCK-------EIARYMQQEGVDVLCFQEFGDN 146 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + FP + S R+++H +V+ + YPL + Sbjct: 147 SD----FPTD------SIRRVLSHWSHALIPSED---SVKGVLPIAVFSRYPLANHRFIT 193 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN---------------TYSPSCS 182 + + ++ V + I +++ HL++ + Sbjct: 194 YQHSSNCSMMCDVVMGTDTIRLINNHLQTTSVSQKRRKWERELATDDTRREVQAAKDAAG 253 Query: 183 LLSQQA--QWLKDWITQKKESLVPFVIA--GDFN---RKINYLGNNDDFWKTIDPNDSLI 235 L + + + ++ P+ + GDFN Y + Sbjct: 254 TLHENFMKRATQTYVISHYAKTSPYPVLLCGDFNSIPSSYTYHHLRKTLKDGFRTAGNGY 313 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + + + IDY S I Y D+ SDH Sbjct: 314 MYTY---------RYAKRMLRIDYIF---------HSPSLKGIEYYSPDLDLC----SDH 351 Query: 296 CPISID 301 P+ ++ Sbjct: 352 NPVIME 357 >gi|302188968|ref|ZP_07265641.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 291 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----------Y 77 SW L G + + +D+ D+V LQE+ Sbjct: 58 SW--QHLLPHGGRAGNLQKIGDLINDF------------DLVALQEVDGGSMRSGFVNQV 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN + R + ++ P Sbjct: 104 EHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLSRLRPTKIEDHPLPGPAG---- 152 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL ++Q +I + Sbjct: 153 -----RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQL----AYIRE 190 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N N L + L + ++ + R + + Sbjct: 191 LIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEATF---PSWRPQRCL 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 241 DHILLSP--------------TLTLERVQVLAQPISDHLPVAVEIRL 273 >gi|326794591|ref|YP_004312411.1| endonuclease/exonuclease/phosphatase [Marinomonas mediterranea MMB-1] gi|326545355|gb|ADZ90575.1| Endonuclease/exonuclease/phosphatase [Marinomonas mediterranea MMB-1] Length = 847 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 45/228 (19%) Query: 22 QKVRLVSWNINTL-SEQEGVSLWKNSVKRTTS---DYT----LLRQYAKNLDADIVFLQE 73 +R+ S+N+ L + + R DY + LDADIV L E Sbjct: 454 GDLRIASFNVLNLFNSPFDGAENPFGDNRGAESLEDYNLQLTKIASAITLLDADIVGLME 513 Query: 74 MGS--------YNAVAKVFPKNT------WCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 + + A+ + + F S + ++ I + R Sbjct: 514 IENNGFDETSAIAALVEAVNTTQPASAAPYA-FISADA-----GYVGSDAIAVGLIYRPS 567 Query: 120 NVRVLQQ----SYPLLGAKDSFSRAGNRRAVELLVEI-----NGKKIWVLDIHLK---SF 167 V ++ P D+ ++ L++ + ++I V+ H K S Sbjct: 568 VVTPKKKAVLIDMPEQHGTDAEGNQFDKYQRTALLQTFKHRRSRERISVVVNHFKSKGSG 627 Query: 168 CFLD--SLENTYSPSCSLLSQQAQ-WLKDWITQKKESLVPFVIAGDFN 212 C D + +CS A L D++ + V +I GD N Sbjct: 628 CIEDANREASDPQSNCSAFRVSAAVALGDYLERNVRGKV--MILGDLN 673 >gi|292609568|ref|XP_697426.2| PREDICTED: nocturnin-like isoform 2 [Danio rerio] Length = 378 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 105/314 (33%), Gaps = 52/314 (16%) Query: 20 VAQKVRLVSWNINTLSEQEG----VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +R++ WN+ + EG V +++ Y +L + DI+ LQE+ Sbjct: 81 ARRTIRVMQWNVLAQALGEGMDNFVQCPLDALNWPERKYMILEEI-LTYKPDILCLQEVD 139 Query: 76 SYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 Y + V + + + ++NN A + + + L+ Sbjct: 140 HYFDMFQPVLATLGYQSSFCPKPWSPCLDVENNNGPD-GCA-----LFFNHKRFQLVNTT 193 Query: 135 DSFSRAGNRRAVELLVEINGKKI----------WVLDI---HLKSFCFLDSLENTYSPSC 181 ++++ N I V + HLK+ + L + Sbjct: 194 HLRL-------SAMMLKTNQVAIVAALRCRSTGRVFCVGVTHLKARSGWEVLRSAQGSD- 245 Query: 182 SLLSQQAQWLKDWITQKK--ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + + + I ++ ES +P ++ GDFN + + + ++ + + Sbjct: 246 --LLRNLRNITQKIETEENAESAIPLIVCGDFNAEPSEDVYRNFATSSLGLDSAYKLLST 303 Query: 240 EKDSRCNANKNLRNKIP------IDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGK 290 + + + + +DY A+ L + +I + + S Sbjct: 304 DGKTE-PPYTTWKIRPSGESCHTLDYVWYSHRAFDVNAVLDFPTAEQI--GPNRLPSYNY 360 Query: 291 RLSDHCPISIDYDF 304 SDH +S+ DF Sbjct: 361 -PSDH--LSLVCDF 371 >gi|299067259|emb|CBJ38456.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum CMR15] Length = 289 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 27/151 (17%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGS-YNAVAKV 83 +++WNI + + R D + + A + D++ LQE+ S ++ + Sbjct: 5 ILTWNIQW---------GRGADGR--VDLSRMLAEAHAMGPFDVLCLQEVTSGFDHLPGQ 53 Query: 84 FPKNTWC----------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ W L H + AIA R + V + + P Sbjct: 54 PGEDQWQELAGALGQAFTLIGGIALERHEGAHIQRFGN-AIATRLPVLHVARHALPCPAD 112 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 R A+E +V+ + V+ HL Sbjct: 113 A---GPTMPRMAIEAIVQAPFGPLRVVSTHL 140 >gi|70731287|ref|YP_261028.1| exonuclease III [Pseudomonas fluorescens Pf-5] gi|68345586|gb|AAY93192.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5] Length = 270 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 45/194 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++VS+NIN L + L D++ LQE + Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQETKVADEQ--- 41 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLL---GAKDSFS 138 FP + + + + H +A +L + PL G + Sbjct: 42 --FP-------LADIQALGYHVHYHGQKGHYGVA-------LLSRQAPLALHKGFEGDDE 85 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 A R + NG + +++ F + + Q L+ + + Sbjct: 86 DAQRRFIWGTFADANGTPVTIMN-----GYFPQGESRDHPTKFPAKERFYQDLQHLLESR 140 Query: 199 KESLVPFVIAGDFN 212 + P V+ GD N Sbjct: 141 FSNDQPLVVMGDVN 154 >gi|312130396|ref|YP_003997736.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311906942|gb|ADQ17383.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 275 Score = 40.4 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 94/302 (31%), Gaps = 39/302 (12%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + L+ + AQ +R+ S+NI +GV+ W R L+R + D D Sbjct: 4 FFILILLLSVQASAQNLRISSYNIRMNRANDGVNNW---NLRKDKVNELIRYH----DFD 56 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 IV +QE + + + + S + S T+ K+ Sbjct: 57 IVGVQE-AFKDQLDDMLRMKEYAYTGSGREDGKSAGEHSAILYKTSRFKLLKSGDFWYSE 115 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 P + K +R NR + K+ +V + H F S LL Sbjct: 116 TPDVPGKGWDARCCNRICSWARFKDLVTKKEFYVFNSH-----FDHEGVEARRNSGKLLV 170 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 + + + +P + GD N + + + ND+ Sbjct: 171 AKMKEI--------AGKLPVIAMGDLN---STPDTEQVVYISQHYNDTFNASEMPPYGPI 219 Query: 246 NANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + K IDY + ++ F Y + K SDH P+ +D Sbjct: 220 GTFNAFKYDAALKDRIDYIFVSEH---------FKVKKYATLTDSYQQKFPSDHLPVVVD 270 Query: 302 YD 303 + Sbjct: 271 LE 272 >gi|328886463|emb|CCA59702.1| Sphingomyelinase C precursor [Streptomyces venezuelae ATCC 10712] Length = 346 Score = 40.4 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 20/158 (12%) Query: 67 DIVFLQEM--GSYNAVAKVFPKNTW--CIFYSTERLIN----HSKRDSNNDIHTAIAVRK 118 D+V LQE S + K + S + + Sbjct: 97 DVVVLQEAFDNSASDALKANSAGQYPYQTPVVGRGTGGWDATGGSYSSTTPEDGGVTILS 156 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSLEN 175 K V ++ Y A + + A +++ +NG K+ VL H +S C Sbjct: 157 KWPIVRKEQYVYKDACGADWWSNKGFA-YVVLNVNGSKVHVLGTHAQSTDPGC------- 208 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFN 212 + + + S+Q + + ++ K + ++AGD N Sbjct: 209 SAGEAVQMRSRQFKAIDAFLDAKNIPAGEQVIVAGDMN 246 >gi|163869207|ref|YP_001610459.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018906|emb|CAK02464.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 271 Score = 40.4 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 103/314 (32%), Gaps = 84/314 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV- 83 R+ +WNIN++ + + +Y + AD++ LQE +A+ V Sbjct: 4 RIATWNINSIRLR----------------LAQVFRYLELFPADVLCLQETKCPDALFPVE 47 Query: 84 -FPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + I S ++ + +A+ V + + + + Sbjct: 48 AFEAAGYKHIALSGQKS------------YNGVAI------VSRLPFKKVNKRFFCQNQD 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD--WITQKK 199 R + ++VEI+G+ + + + ++ + + E + +L++ +I + Sbjct: 90 CRY-ISVIVEIHGRSLRIHNFYVPAGGDIPDAEVNEK-----FRHKLDFLEEMSFIRADQ 143 Query: 200 ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR--CNAN--------- 248 E + ++ GD N I L + + + S E+ C Sbjct: 144 EKGISSLLLGDLN--IAPLAEDVWSHQQLLKVVSHTPIETERLQGLCCQGGWIDLMRLHI 201 Query: 249 -------KNLRNKI----------PIDYFVMDQNAYKFLIQ-ESFSEILYNEDDIKSRGK 290 + +D+ + FL+ +F + + Sbjct: 202 PVPTKLYTWWSYRARDWALTDYGRRLDHVWSSPDLASFLVDLSTFRD--------ARGWE 253 Query: 291 RLSDHCPISIDYDF 304 R SDH P+ ++F Sbjct: 254 RPSDHIPVQTVFNF 267 >gi|159029855|emb|CAO90909.1| xthA [Microcystis aeruginosa PCC 7806] Length = 262 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 99/309 (32%), Gaps = 77/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQE--MGSYNAV 80 +++ +WN+N++ R L L+ +++ LQE + + Sbjct: 1 MKIATWNVNSIRS------------RQDQVINWL-----QLNPVEVLCLQETKVIDRDFP 43 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFS 138 + F + ++ S ++ + +A+ +K + P++G + Sbjct: 44 REAFESLGYHLYISGQKA------------YNGVAIFSQKPLDDITVGFSPIIGENLTGE 91 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +R + ++ I ++++++ + LDS + Y L ++L I Sbjct: 92 LDEQKRLITGVIGD----IRIINLYVPNGSSLDSDKYIYKL--KWLETLRKYLDKIIN-- 143 Query: 199 KESLVPFVIAGDFN----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242 I GDFN ++ + K ++ L ++ Sbjct: 144 -SQPQELCICGDFNIALEDKDIYDPKGKENHIMSSAKEREALEKVLEIG--LQDAFRKFT 200 Query: 243 SRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 S + ID+ + Y+ + D + ++ S Sbjct: 201 SAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNCLI-------DREPRKQEKPS 253 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 254 DHTPVILEI 262 >gi|15641862|ref|NP_231494.1| exonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587322|ref|ZP_01677094.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|147674047|ref|YP_001217394.1| exonuclease III [Vibrio cholerae O395] gi|153820118|ref|ZP_01972785.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|227081989|ref|YP_002810540.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|229508043|ref|ZP_04397548.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229511718|ref|ZP_04401197.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229518856|ref|ZP_04408299.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229607590|ref|YP_002878238.1| exonuclease III [Vibrio cholerae MJ-1236] gi|254848946|ref|ZP_05238296.1| exonuclease III [Vibrio cholerae MO10] gi|255745380|ref|ZP_05419329.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262153517|ref|ZP_06028646.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|262167417|ref|ZP_06035124.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|298498101|ref|ZP_07007908.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] gi|9656389|gb|AAF95008.1| exodeoxyribonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548482|gb|EAX58540.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|126509336|gb|EAZ71930.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|146315930|gb|ABQ20469.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|227009877|gb|ACP06089.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|227013758|gb|ACP09968.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|229343545|gb|EEO08520.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229351683|gb|EEO16624.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229355548|gb|EEO20469.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229370245|gb|ACQ60668.1| exodeoxyribonuclease III [Vibrio cholerae MJ-1236] gi|254844651|gb|EET23065.1| exonuclease III [Vibrio cholerae MO10] gi|255737210|gb|EET92606.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262024114|gb|EEY42808.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|262030644|gb|EEY49279.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|297542434|gb|EFH78484.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] Length = 268 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + NG+K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDNEEHQK-----RMIMATFADQNGQKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNSERLVVMGDIN 154 >gi|53714527|ref|YP_100519.1| hypothetical protein BF3240 [Bacteroides fragilis YCH46] gi|52217392|dbj|BAD49985.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 344 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 101/335 (30%), Gaps = 74/335 (22%) Query: 23 KVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--------------A 66 R+V WN L + + + + + + R+Y K LD Sbjct: 24 PFRVVFWNTENLFDTRHDSLKNDMEFLPHSMRHWNH-RRYKKKLDNVARTLTAIGEWNFP 82 Query: 67 DIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ L E+ + + + + + + I A+ ++ Sbjct: 83 ALIGLCEVENDTVMRDLTLYSPLKEAGYRYVMT--------HCSDLRGIDVALLYQRDRF 134 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL--KSFCFLDSLENTYS 178 ++L SY L + R + + + + G + ++ HL +S S Sbjct: 135 KLL--SYSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGVRQSEPYRLY 192 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSL-- 234 + L A L I + + + +I GDFN +Y + + + P S Sbjct: 193 AA-QKLKDAADSL---INVRPSAKL--IIMGDFN---DYPTDKSVVQVLQALSPEVSTHH 243 Query: 235 -----IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------------F 269 + K KD + K +D+ ++ Sbjct: 244 DRLYHLLARKAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLL 303 Query: 270 LIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 E + + + + SDH P+ +D++ Sbjct: 304 TKDEKYGGMQPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|288928392|ref|ZP_06422239.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] gi|288331226|gb|EFC69810.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] Length = 321 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 33/263 (12%), Positives = 73/263 (27%), Gaps = 45/263 (17%) Query: 66 ADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V L E+ + + + + + + + T A+ K Sbjct: 73 PDLVALCEVENDSVLHDLTRRSLLRTARYEYVMTHSPDLRGIDVALLYSPFT-FALIKSY 131 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++ + +D G G + V +H S ++ Y + Sbjct: 132 ALRIKPPTGMRPTRDILYAEGVTFG--------GDTLHVFVLHAPSRAGGEANTRPYRMA 183 Query: 181 CSLLSQQAQWLKDWITQ-KKESLVPFVIA-GDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 A L I ++ + ++ GDFN D + + L Sbjct: 184 V------ANRLCTAIDSIRQGNPTANIVVTGDFN------DYGDAPALRLLAANGLTDVS 231 Query: 239 KEKDSRCNANKNLRN---KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR---- 291 A R +D+ + Q ++ + + + +D + G + Sbjct: 232 ANAIGINGAKGTYRYQGEWGSLDHVFVSQKIHEKGVSCHIFDAPFLMEDEEKYGGKRPWR 291 Query: 292 ----------LSDHCPISIDYDF 304 SDH P+ + + Sbjct: 292 TYQGPKYLGGFSDHLPVVVTFGM 314 >gi|225431130|ref|XP_002265926.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 625 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 91/287 (31%), Gaps = 58/287 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++V++N+N L R + + L ++ +LDADI+ +QE + A Sbjct: 1 MKIVTYNVNGLR------------PRISQ-FGSLLKFLSSLDADIICVQETKLSRHELTA 47 Query: 82 KVFPKNTWCIFYS-----TERLINHSKRDSNNDIHTAI---------AVRKKNVRVLQQS 127 V + + F+S ++ + +S + + +A A + +L++S Sbjct: 48 DVVMADGYESFFSCTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKS 107 Query: 128 YPLLGAKD---SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 KD + A + L++++ + ++ H F S + Sbjct: 108 GGFGTGKDEIPVKAEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERI 167 Query: 185 SQQ---AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND------------DFWKTID 229 + Q L+ ++ + GD N + D F + Sbjct: 168 QFKHTFFQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLV 227 Query: 230 PNDS-------LIRFPKEKDSRCNANKN----LRNKIPIDYFVMDQN 265 + + C ++ ID+ + + Sbjct: 228 ECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGS 274 >gi|168485698|ref|ZP_02710206.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC1087-00] gi|183571088|gb|EDT91616.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC1087-00] Length = 333 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTETKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|153825215|ref|ZP_01977882.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|153830542|ref|ZP_01983209.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|229523879|ref|ZP_04413284.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|229529117|ref|ZP_04418507.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|297579378|ref|ZP_06941306.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|148873972|gb|EDL72107.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|149741194|gb|EDM55245.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|229332891|gb|EEN98377.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|229337460|gb|EEO02477.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|297536972|gb|EFH75805.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|327484412|gb|AEA78819.1| Exodeoxyribonuclease III [Vibrio cholerae LMA3894-4] Length = 268 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + NG+K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDNEEHQK-----RMIMATFADQNGQKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNSERLVVMGDIN 154 >gi|89256562|ref|YP_513924.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica LVS] gi|115314993|ref|YP_763716.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica OSU18] gi|156502683|ref|YP_001428748.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010026|ref|ZP_02274957.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC200] gi|254367881|ref|ZP_04983901.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica 257] gi|254369453|ref|ZP_04985465.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC022] gi|290954628|ref|ZP_06559249.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|295311920|ref|ZP_06802747.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|89144393|emb|CAJ79683.1| Exodeoxyribonuclease III [Francisella tularensis subsp. holarctica LVS] gi|115129892|gb|ABI83079.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica OSU18] gi|134253691|gb|EBA52785.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica 257] gi|156253286|gb|ABU61792.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122403|gb|EDO66543.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC022] Length = 262 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 88/276 (31%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 24 FKTQDVDFLCMQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 72 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 122 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 123 YKM---QFLKKYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES + +Y E+ SDH P++I+YD+ Sbjct: 234 KVVPES--DYVYKENWF-------SDHAPLTINYDY 260 >gi|322417960|ref|YP_004197183.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320124347|gb|ADW11907.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 346 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 85/309 (27%), Gaps = 84/309 (27%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +R+++WNI D L + + DIV Q + Sbjct: 92 EASGATLRVMTWNIKY----------------GKRDLMPLIEELERSRPDIVLFQ--DAV 133 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG-AKDS 136 A + + S +L + + +A R V + P K++ Sbjct: 134 RA-----GEGPLVDYLSGWQLESRGQYL--------VASRYPISAVEVHALPSRDRKKET 180 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 F R R ++I + ++H K+ + + A ++ I Sbjct: 181 FLRCRVRVGS--------REISLYNVHFKT-------PRRSLNAFRKAKRGAWYIPKAID 225 Query: 197 QKKESLV------------------PFVIAGDFN---RKINYLGNNDDFWKT-IDPNDSL 234 + + ++ F++AGDFN + Sbjct: 226 RFEGNVETRLLQAERVAEYLGRERGDFLVAGDFNSPDHSLVCETLRKTGMTDAFAEAGRG 285 Query: 235 IRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 + + LR ID+ + L + +R S Sbjct: 286 YGYSYGHFLLKDRIPYLRASWMRIDHIMTSAG----LRARNCRVGT----------RRAS 331 Query: 294 DHCPISIDY 302 DH P+ D+ Sbjct: 332 DHRPVIADF 340 >gi|228949463|ref|ZP_04111717.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810186|gb|EEM56553.1| hypothetical protein bthur0007_55730 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 342 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 61/156 (39%), Gaps = 16/156 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 ++R ++N+ E ++ + + +D+ +++ ++ D++ QE+ S N Sbjct: 2 QIRFGTFNLYQFVEPP-YKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTN 60 Query: 79 AVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------- 130 A+ + + + F + + + ++ AIA + + V P Sbjct: 61 ALKNLVEEVGFTHFITVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVL 120 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 LG FSR + + + + + + HLKS Sbjct: 121 LGKTFKFSRIPIKAKIRI---DSSRDVICYVSHLKS 153 >gi|156344739|ref|XP_001621294.1| hypothetical protein NEMVEDRAFT_v1g222142 [Nematostella vectensis] gi|156207077|gb|EDO29194.1| predicted protein [Nematostella vectensis] Length = 131 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 51/127 (40%), Gaps = 10/127 (7%) Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRFPK 239 S + + + ++ QK+ +P ++ GDFN + ++ + + S + Sbjct: 7 SQVKKVVSGIDKFLKQKELHSIPVILTGDFN-----SPETNPVYQFVKGSGFASSYKVVN 61 Query: 240 EKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDD-IKSRGKRLSDHCP 297 +++ +K+ R + +DY + + +S + +D + +SDH Sbjct: 62 GREAGVT-HKDHRGRELSVDYIFYRNSGSCAISPKSSIMLPQQYNDQVWPEEFTISDHRM 120 Query: 298 ISIDYDF 304 I ++D Sbjct: 121 IVTEFDM 127 >gi|15892951|ref|NP_360665.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15620145|gb|AAL03566.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 260 Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 37/189 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN++ + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNINSIKTR----------------LNLLRNFLSKENPDILLLQEIKCETAK--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + ++ + +A+ + + +++ R Sbjct: 42 FPFDA----LSD---LPYNSYVHGQKSYNGVAI----ISKFPADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGAFVGSDKFVAKLAFY------DNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFN 212 +I GDFN Sbjct: 144 KTIIGGDFN 152 >gi|311696215|gb|ADP99088.1| endonuclease/exonuclease/phosphatase [marine bacterium HP15] Length = 286 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 77/259 (29%), Gaps = 48/259 (18%) Query: 47 VKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 R L + A L D+V LQE + + + + + I + + Sbjct: 67 PHRNR--IENLDRIASLLRGYDVVALQECDGGSLRSGYINQVQY---LAEAAGIPYWYQQ 121 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 N ++ + N + + + R A+ + ++ +HL Sbjct: 122 LNRNL--GQIAQHSNGLLSRYRPLDVTEHKLPGLIPGRGAIIARYGTEHDPLVLVLMHL- 178 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFW 225 S S +QQ Q +I + V+ GD N L Sbjct: 179 --------------SLSKTAQQRQL--GYIRELIADYRHVVLMGDMNAHAEQLLTQTPL- 221 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 L+ P ++ + R + +D+ ++ + L + Y Sbjct: 222 ----RETDLVPLPDTA----HSFPSWRPEKALDHILVSPS----LEIRRSEVVSYP---- 265 Query: 286 KSRGKRLSDHCPISIDYDF 304 +SDH PI++D Sbjct: 266 ------MSDHLPIAMDVAL 278 >gi|254413694|ref|ZP_05027463.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] gi|196179291|gb|EDX74286.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] Length = 264 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 77/310 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT D + Q+ D++ LQE + Sbjct: 1 MKIATWNVN--------------SIRTRQD--HVCQWLTANPVDVLCLQETKVVDEQFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSN---NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 F + ++ S ++ N S + + + L + Sbjct: 45 SRFEDLGYHLYVSGQKSYNGVALFSRKPLEAVTVGFT-----GVLTPEEVGELDGQKRLI 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQ 197 + ++++++ + + S + Y S LL + + L Sbjct: 100 TGILDG------------VRIINLYVPNGAEVGSEKYEYKLSWLKLLKEYVRSL------ 141 Query: 198 KKESLVPFVIAGDFN-----RKINYLGNND-DFWKT------------IDPNDSLIRFPK 239 + I GDFN R I+ N D + + D+ +F + Sbjct: 142 LETQPHELCICGDFNIAPDDRDIHNPKNKDKHIMASPAERQALEEVLALGLGDAFRKFTQ 201 Query: 240 EKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLS 293 + RN+ ID+ +L + + D++ R ++ S Sbjct: 202 DGGHFSWWDYRHGGFSRNRGWRIDH--------HYLTPKLYEAATRCRIDVEPRKLEKPS 253 Query: 294 DHCPISIDYD 303 DH P+ ++++ Sbjct: 254 DHAPVIVEFE 263 >gi|196013219|ref|XP_002116471.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] gi|190581062|gb|EDV21141.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] Length = 284 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 84/274 (30%), Gaps = 52/274 (18%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEM-------GSYNAVAKVFPKNTWCIFYSTERL 98 S R + L + + D DI+ LQE+ A+ VFP + + FYS + Sbjct: 5 SPHRDER-FKYLAEALRQSDYDIIGLQEVWLIKNYEALKVALKAVFPHSHY--FYSGKIG 61 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAKDSFSRAGNRRAVELLVEINGKKI 157 + T+ YP L D + G +++NG + Sbjct: 62 SGKCIFSRFPIVATSFTAY------TLSGYPYALNHGDWLGKKGVGF---CKIDVNGTIL 112 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----- 212 V H+ + D+ ++ Q L + P ++ GD N Sbjct: 113 NVYVTHIHAEYNRDNDVYLPHRVTEIV--QLSQLIRF----TAGNSPVILIGDLNFEPED 166 Query: 213 ---RKINYLGNNDDFWKTIDPNDSLIRFPKE--------KDSRCNANKNLRNKIPIDYFV 261 R I + D W ++ D ++ + + + + + IDY + Sbjct: 167 IGYRFITTSLDLKDAW--LEAGDGVMLYTRNNIDYSDSLNTNSFTPANEIEKR--IDYIL 222 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K ++ I SDH Sbjct: 223 YSGDHLK----SQACQVTLGR--IPDAAFNYSDH 250 >gi|119899170|ref|YP_934383.1| exodeoxyribonuclease III [Azoarcus sp. BH72] gi|119671583|emb|CAL95496.1| exodeoxyribonuclease III [Azoarcus sp. BH72] Length = 253 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 82/304 (26%), Gaps = 76/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N+L R L D + LQE K Sbjct: 1 MKIATWNVNSL------------KVRLPHVLDWLAA----NQPDALCLQE---LKLEDKG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-SYPLLGAKDSFSRAGN 142 FP ++ + + +A+ + P + A Sbjct: 42 FPVAELQ-------AAGYNAVFNGQKTYNGVAILSPHPLEDVVRDIPGFSDEQKRIIAAT 94 Query: 143 RRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V ++ NG+ + D E L +W+ + Sbjct: 95 VNGVRIVCGYFPNGQAV-----------GSDKFEYKLRW--------LGALTEWLRAELT 135 Query: 201 SLVPFVIAGDFN----RKINYLGNNDDF------------WKTIDPNDSLIRFPKEKDSR 244 + V+ GDFN + + D+ + D+ + + + + Sbjct: 136 AHPRLVLGGDFNIAPEDRDAHPDWKDEIHVSAPERAAFTALTALGLVDAFRLYDQPERAF 195 Query: 245 CN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + ID+ ++ + D + +R SDH P+ Sbjct: 196 SWWDYRMGAFRRNFGLRIDHLLVSPALQPACRACTV-------DKAPRKLERPSDHAPVV 248 Query: 300 IDYD 303 +D + Sbjct: 249 LDLE 252 >gi|13540877|ref|NP_110565.1| exonuclease III [Thermoplasma volcanium GSS1] gi|14324259|dbj|BAB59187.1| exodeoxyribonuclease [Thermoplasma volcanium GSS1] Length = 252 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 51/230 (22%) Query: 114 IAVRKKNVRVLQQSYPLLG---AKDSFSRAGNRRAV------------ELLVEINGKKIW 158 A+ + +V +S P ++ R+ ++ ++ Sbjct: 33 FAIAMQETKVDVKSVPEEMYHLGYHVYNNPAKRKGYSGTMTLSREKPIDVSYGFESEEGR 92 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFN---- 212 +L++ +F F+++ + L + + K ++ P +I GDFN Sbjct: 93 ILNLEFDNFYFINAYFPNSQHGLTRLDLKLDFDKKFLGYANDLRKKKPLIICGDFNVAHE 152 Query: 213 -----------RKINY-LGNNDDFWKTIDPN--DSLIRFPKEKDSRCNANKNLRNKIP-- 256 + + + + D+ F + + + Sbjct: 153 EIDIARPKDNEHNAGFTIEERTWMSQFLSSGYVDTFRLFTTDGGHYSWWSYRFNAREKNI 212 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDYFV+ + + E + + SDH P+ ++ D Sbjct: 213 GWRIDYFVVSDDIKDKVKASRILENV-----------KGSDHAPVELEID 251 >gi|315917346|ref|ZP_07913586.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|313691221|gb|EFS28056.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 269 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 40/203 (19%) Query: 23 KVRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 K++L++ N+ + L E++ LL + D++ LQE+ Sbjct: 4 KMKLLTINVHSWLEEKQ------------EEKMELLAKVIAEKRYDVIALQEVNQKIEAR 51 Query: 82 KVFPKNT-----WCI------FYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYP 129 + + + + + + + S DI+ IA+ ++ + ++ + Sbjct: 52 LLKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFY 111 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 +K +S + +R+ V++ +EI GK+I H+ P C + + + Sbjct: 112 CTNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHM------------NLPDC--IEENME 156 Query: 190 WLKDWITQKKESLVPFVIAGDFN 212 I + ++ GDFN Sbjct: 157 QNIQNILKHSSRNCLKILMGDFN 179 >gi|332202463|gb|EGJ16532.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA41317] Length = 333 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|75910924|ref|YP_325220.1| endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413] gi|75704649|gb|ABA24325.1| Endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413] Length = 2346 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 95/334 (28%), Gaps = 57/334 (17%) Query: 16 CTASVAQKVRLVSWN-INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN-------LDAD 67 T V +++ S+N +N + S + + +R + T + L+AD Sbjct: 1732 TTPDVGGTLKVASFNVLNYFNGDGTGSGFTSPEQRGAENLTEFNRQRDKTIAAILGLNAD 1791 Query: 68 IVFLQEMGSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNND-IHTAIAVRKKNV 121 +V L E+ + A+ + T IN D I + + +V Sbjct: 1792 VVGLIEIENDGYGANSAIQDLVNGLNAVAGAGTYAFINPGLSQLGTDAIAVGLIYKPNSV 1851 Query: 122 RVLQQSYPLLGAKDSFS-RAGNRRAVELLVEINGKKIWVLDI--HLKS-FCFLDSLENTY 177 + + + + NR+ + N + H KS + + Sbjct: 1852 TPIGTAATVADGFGQGAFDNNNRKPLAQTFRQNSTGEQFTAVINHFKSKGSSFGNPGDAD 1911 Query: 178 SPSCSLLS-----QQAQWLKDWITQK--KESLVPFVIAGDFNR----------------- 213 + LS + +Q L W+ + ++I GD N Sbjct: 1912 AGDGQGLSNGTRTRASQDLAAWLATNPTGTTDTDYLILGDLNAYAQEDPIRALENAGYNN 1971 Query: 214 ---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 Y D W +D + + + N +DY Sbjct: 1972 LLPNTTYSYVFDGQWGALDHALANASLTAQLSGAVKWHINADEPNVLDY----------- 2020 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +F + R SDH P+ + + Sbjct: 2021 -NTNFKSVGQQTSLYSPDAFRSSDHDPVIVGLNL 2053 >gi|85704128|ref|ZP_01035231.1| hypothetical protein ROS217_14056 [Roseovarius sp. 217] gi|85671448|gb|EAQ26306.1| hypothetical protein ROS217_14056 [Roseovarius sp. 217] Length = 348 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 13/103 (12%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L L F +P ++ +RL SWN+ L L ++ + + + + Sbjct: 2 LVLAFCTLPAH---SETLRLASWNVK-LDRAGPGLLLRDILSGSDPQIEAVAGVLLVVRP 57 Query: 67 DIVFLQEMG------SYNAVAKVF---PKNTWCIFYSTERLIN 100 DI+ LQ + + A+ + ++ Sbjct: 58 DILVLQGVDHDLDLLAVKALRDRIAQGGGPRYDHLFAPRPNSG 100 >gi|296113240|ref|YP_003627178.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|295920934|gb|ADG61285.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|326560231|gb|EGE10619.1| exonuclease III [Moraxella catarrhalis 7169] gi|326562876|gb|EGE13163.1| exonuclease III [Moraxella catarrhalis 46P47B1] gi|326563683|gb|EGE13935.1| exonuclease III [Moraxella catarrhalis 103P14B1] gi|326565237|gb|EGE15422.1| exonuclease III [Moraxella catarrhalis 12P80B1] gi|326566451|gb|EGE16601.1| exonuclease III [Moraxella catarrhalis BC1] gi|326570258|gb|EGE20303.1| exonuclease III [Moraxella catarrhalis BC8] gi|326570995|gb|EGE21019.1| exonuclease III [Moraxella catarrhalis BC7] gi|326573291|gb|EGE23259.1| exonuclease III [Moraxella catarrhalis 101P30B1] gi|326575810|gb|EGE25733.1| exonuclease III [Moraxella catarrhalis CO72] gi|326576891|gb|EGE26797.1| exonuclease III [Moraxella catarrhalis O35E] Length = 271 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 86/307 (28%), Gaps = 77/307 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 VS+NIN L + L L ADI+ LQE ++A+ F Sbjct: 3 TFVSFNINGLRARPH----------------QLEAIRDILGADIIGLQETKVHDAL---F 43 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN-VRVLQQSYPLLGAKDSFSRAGNR 143 P N + + H +A+ K +Q+ +P R Sbjct: 44 PVNMVQ-------DLGYHVEFFGQKSHYGVALASKIAPTFVQKGFPFGHDDAQRRLIHAR 96 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G+ I VL+ F ++ + + L +I + + Sbjct: 97 Y------DFDGRSIDVLN-----GYFPQGENRSHEIKFPMKREFYADLNRYIDELQADGR 145 Query: 204 PFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRF------ 237 +I GD N I W + + L Sbjct: 146 ELIIMGDMNISPEDIDVGIGAANAKRWLAKGTCSFLPEERAWYQMLMSTGLTDTYRLFYP 205 Query: 238 -PKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ S + + + ID+ + + I Y+ + + Sbjct: 206 KSHDEFSWFDYRSRGFEDTPKRGLRIDHILCTDTLKNDCVAAG---ISYDIRAMD----K 258 Query: 292 LSDHCPI 298 SDH PI Sbjct: 259 PSDHAPI 265 >gi|218130390|ref|ZP_03459194.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697] gi|217987391|gb|EEC53721.1| hypothetical protein BACEGG_01979 [Bacteroides eggerthii DSM 20697] Length = 372 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 90/347 (25%), Gaps = 62/347 (17%) Query: 6 VLALVFFLVPCTASVAQKV-------RLVSWNINTL------SEQEGVSLWKNSVK---- 48 V ALVF +A + ++ R++ +N+ L + + ++V+ Sbjct: 26 VAALVFLAFLSSAPLYGQIKKDTLTFRIMGYNVENLFDCRHDTLKNDYEFLPDAVRHWNY 85 Query: 49 -RTTSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 + + + + +V L E+ + + + + + I + Sbjct: 86 FKYKKKLDAIARVIIAVGKWTPPALVALCEVENDSVLHDL---TRYSILREAGYRYVITH 142 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 I A+ ++ ++L + SR + +N + V H Sbjct: 143 SPDERGIDVALLYQRGIFKLLSSQSLPVTGLHKSSRPTRDILHVSGLLLNRDTLDVFVAH 202 Query: 164 LKSFCFLDSLENTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 S Y + L L + +I GDFN Sbjct: 203 FPSRSGGAKASEPYRLLAAQRLKNATDSLF-----HVRTHPQIIIMGDFNDYPGNKSVQK 257 Query: 223 DFWKTIDPNDS--------LIRFPKEKDSRCNAN--KNLRNKIPIDYFVMDQNAYKFLIQ 272 I P ++ ++ + + K +D+ ++ N Sbjct: 258 ILKAGIPPAETDSLKSQMLYHLLARKSAANKHFGSYKYQGEWGLLDHIILSGNLLTATSP 317 Query: 273 ---------------------ESFSEILYNEDDIKSRGKRLSDHCPI 298 + + SDH P+ Sbjct: 318 LYTAEDKADVFHAPFLLTEDKKYGDNQPFRTYYGMKYQAGYSDHLPV 364 >gi|104781211|ref|YP_607709.1| exonuclease III [Pseudomonas entomophila L48] gi|95110198|emb|CAK14905.1| exonuclease III [Pseudomonas entomophila L48] Length = 270 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 83/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIDKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AGN 142 + + + H +A + ++ L S A Sbjct: 38 ---SDDQFPLKDVEALGYHVHYHGQKGHYGVA-----LLSREKPLSLHKGFASDEEDAQR 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +G + V++ F + + L+ + + ++ Sbjct: 90 RFIWGTFADRDGTPVTVMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFQNG 144 Query: 203 VPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLI 235 P ++ GD N R + + W +D L Sbjct: 145 QPVLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLN 204 Query: 236 RFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ S + + + ID + Q L D + Sbjct: 205 PEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRLKAAGV-------DYELRGME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|83593698|ref|YP_427450.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83576612|gb|ABC23163.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 255 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 25/161 (15%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF--YSTERLINHSKRDSNNDIHT 112 + Q + LDAD++ LQE+G A+ + + + +I R N Sbjct: 37 DRVAQAIRALDADVIGLQEVG--WALRGPSGFDQFAFLERETGYTVIPGLVRHHANAHF- 93 Query: 113 AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 A+ ++ L S R ++ + + G+ + ++++HL Sbjct: 94 GNAILSRHPVESVAPLDL-----SLPYHSPRGGIDARIRVKGRSVRLINVHL-------- 140 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 + + L W P ++ GD N Sbjct: 141 GLIPLERRIQIRRIGLRLLDGW-------RGPALVCGDLNH 174 >gi|229171215|ref|ZP_04298808.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228612295|gb|EEK69524.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 263 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 30/230 (13%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI--- 110 L + + + D++ LQE+ V F + + +I Sbjct: 20 IKYLAKVIQEEEYDVIALQEVSQSIQAGNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 79 Query: 111 --HTAIAVRKKNVRVLQQ------SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 H V ++ + ++ + + + R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTRKIVSATIAYNDKNITFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL + D E+ Q L + +S + GDFN G Sbjct: 140 HL--GWWNDEEES--------FKDQVNRLMG----RVDSNELSFLMGDFNNNARLQGEGY 185 Query: 223 DFWKTIDPNDSLIRFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAY 267 ++ D+ ++ + + ++ + ID + +Q+ Sbjct: 186 EYMMQKGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNQSEK 235 >gi|170587921|ref|XP_001898722.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] gi|158592935|gb|EDP31530.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] Length = 339 Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 44/196 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAV 80 + ++SWNI+ L E N R +T + + AD+VFLQEM V Sbjct: 97 SLTVMSWNIDGLDEN-------NLTIR----FTAVCYIISKISADVVFLQEMTPDLVPQV 145 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 K + I +T N T + ++ + ++ P + R+ Sbjct: 146 RKNLSG-EYSILVAT----------PNLPYFTVVLLKPFIELISHKAIP-------YRRS 187 Query: 141 GN-RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 G R + + G+K+ +L+ HL+S + T C + L +W Sbjct: 188 GMGRSMQLVETSLRGRKVMLLNTHLESMKEHSDIRLTQIQEC------FKQLVEW----- 236 Query: 200 ESLVPFVIA-GDFNRK 214 + ++ GD N + Sbjct: 237 DDGKTVIVFGGDLNAR 252 >gi|265750587|ref|ZP_06086650.1| predicted protein [Bacteroides sp. 3_1_33FAA] gi|263237483|gb|EEZ22933.1| predicted protein [Bacteroides sp. 3_1_33FAA] Length = 334 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 46/202 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSY 77 + +++LV WN G L K++ T + L IV LQE Sbjct: 93 SNQLKLVCWNTE------GFRLNKDT-------LTKAAHSIRVLQPGIVCLQERPHTNLL 139 Query: 78 NA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP +CI S E + ++ A+ R V + +P K Sbjct: 140 AWDTIRAAFPDYPYCIINSRE----------DEVLNLAVFSRWPIGNVQEYYFPNSYNKI 189 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----LLSQQAQW 190 + +++ G+ + ++HL++ + ++QA Sbjct: 190 LQAD----------IQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADL 239 Query: 191 LKDWITQKKESLVPFVIAGDFN 212 L I + S P ++ GDFN Sbjct: 240 LTKAIAE---SPYPVIVCGDFN 258 >gi|229131369|ref|ZP_04260269.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228652113|gb|EEL08050.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 263 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 27/180 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKR----- 104 L + + D D++ LQE+ V F R +N + Sbjct: 20 IKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNIIWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 D++ +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTY-WKTRKIVSATIAYNDKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HL + D E+ Q L ++ S + GDFN G Sbjct: 139 CHL--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEG 184 >gi|32475353|ref|NP_868347.1| hypothetical protein RB8407 [Rhodopirellula baltica SH 1] gi|32445894|emb|CAD78625.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 281 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 93/308 (30%), Gaps = 60/308 (19%) Query: 5 YVLALVFFLVPCTASVAQK--------VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL 56 A F++ +AQ+ +R++S+NI+ +G D Sbjct: 17 IAFASFAFMLRSPLVLAQEQETNSTIRLRVLSYNIHHGRGTDG-----------KIDLDR 65 Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L +++D D+V +QE+ N + T +K+ + AV Sbjct: 66 LANVIRSVDPDLVAVQEVD-QNTRRNGMVNQVETLAVQTSLHGKFAKQIDYDGGEYGQAV 124 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + + L G D E+L+ ++ HL + Sbjct: 125 LSKYPIESLEVHWLPG--DPIRERRIVGVAEILIHKT--RLRFATTHL----------HH 170 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 +QA L + P +IAGDFN K L +T+ Sbjct: 171 SRADLR--EKQATELNRLL---ACGSTPVIIAGDFNAKPASLA-----MQTL----QAKW 216 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 +S N+ DY M +++ + SDH Sbjct: 217 RIATTESMHTFPARSPNRQL-DYVAMYPANSWRIVESEVLDEPVA-----------SDHR 264 Query: 297 PISIDYDF 304 P+ ++ + Sbjct: 265 PLLVEIEL 272 >gi|237710997|ref|ZP_04541478.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454841|gb|EEO60562.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 334 Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 46/202 (22%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MGSY 77 + +++LV WN G L K++ T + L IV LQE Sbjct: 93 SNQLKLVCWNTE------GFRLNKDT-------LTKAAHSIRVLQPGIVCLQERPHTNLL 139 Query: 78 NA--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 + FP +CI S E + ++ A+ R V + +P K Sbjct: 140 AWDTIRAAFPDYPYCIINSRE----------DEVLNLAVFSRWPIGNVQEYYFPNSYNKI 189 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCS----LLSQQAQW 190 + +++ G+ + ++HL++ + ++QA Sbjct: 190 LQAD----------IQMTGQTFRLFNVHLQTTGMNESYSMKDRFQAMRHHTVQRNRQADL 239 Query: 191 LKDWITQKKESLVPFVIAGDFN 212 L I + S P ++ GDFN Sbjct: 240 LTKAIAE---SPYPVIVCGDFN 258 >gi|301162321|emb|CBW21866.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 285 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + L C+++ VR+ ++NI + + ++ WK + ++ + Sbjct: 10 VFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKVCEFIREKHP 62 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D++ +QE+ ++ + + + + RK +L Sbjct: 63 DVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDS 116 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 +P K + A R A ++ GK+ +L+ H F Sbjct: 117 NTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTEARR 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + D I + P ++ GDFN + + ++ + Sbjct: 172 NS-------ALLIIDKIKE-IAGTHPAMMTGDFN------VSEEWEAYKTITSNEFVLKD 217 Query: 239 KEKDSRCNANKNLRN----------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 K + + +N + ID+ + A +I + ++ Y Sbjct: 218 AWKIAGKQSGENYTFHDFGRVPVAEREKIDFIFVTPQIKVADAEIISSAITDSTY----- 272 Query: 286 KSRGKRLSDH 295 LSDH Sbjct: 273 ------LSDH 276 >gi|297199538|ref|ZP_06916935.1| predicted protein [Streptomyces sviceus ATCC 29083] gi|297147430|gb|EFH28625.1| predicted protein [Streptomyces sviceus ATCC 29083] Length = 371 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 37/272 (13%) Query: 50 TTSDYTLLR---QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 D +R + +DAD++ E+ A+ + F D Sbjct: 120 DDLDLDTVRNTGRVVSEVDADVLLTVEVEDRLALER-FNSQVLAGALGRRPYPYALLIDG 178 Query: 107 NN--DIHTAIAVRKKNVRVLQ---QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 N+ I I R + ++ P + FSR + +NG + +L Sbjct: 179 NDSRGIDIGIFSRYPITSLRTHIFETNPNRPDERLFSRDCPEF----EIRLNGTPLVILG 234 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 HLKS + +L QA+ + + E ++AGD +N ++ Sbjct: 235 NHLKS---------KSNDDPALRLAQARRVAEIYRAALERTPHVIVAGD----LNDFPSS 281 Query: 222 DDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D + R + ++ R+K IDY +M ++ + Sbjct: 282 DSVATLEGAGLRDAMSHRSYRGLPGTFKPCQSERDK--IDYLLMSPEVWQEVQHVGLETR 339 Query: 279 ------LYNEDDIKSRGKRLSDHCPISIDYDF 304 + + D + S SDH + +D D Sbjct: 340 GICADGIKSFDTVTSPIDAASDHAALYMDVDL 371 >gi|42571739|ref|NP_973960.1| IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I); inositol trisphosphate phosphatase/ inositol-polyphosphate 5-phosphatase [Arabidopsis thaliana] gi|332193552|gb|AEE31673.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 [Arabidopsis thaliana] Length = 589 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 23/184 (12%) Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ--- 197 GN+ +V + + I L HL S D+ + + + ++ Q+L + Sbjct: 379 GNKGSVSVSMSIYQTPFCFLCTHLSSG-EKDTDQEKRNDDVREIHRRTQFLPHSLNANEL 437 Query: 198 -KKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIR-FPKEKDSRCNANK 249 + + GD N +IN W+ + D L R K + Sbjct: 438 PRSICNHEIIWLGDLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSEG 497 Query: 250 N----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCPI 298 K ID ++ D I++N +K R LSDH P+ Sbjct: 498 TLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHRPV 557 Query: 299 SIDY 302 + + Sbjct: 558 TATF 561 >gi|66043537|ref|YP_233378.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63254244|gb|AAY35340.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 291 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----------Y 77 SW L G + + +D+ D+V LQE+ Sbjct: 58 SW--QHLLPHGGRAGNLQKIGDLINDF------------DLVALQEVDGGSMRSGFVNQV 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN + R + ++ P Sbjct: 104 EHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLSRLRPTKIEDHPLPGPAG---- 152 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL ++Q +I + Sbjct: 153 -----RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQL----AYIRE 190 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N N L + L + ++ + R + + Sbjct: 191 LIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEATF---PSWRPQRCL 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 241 DHILLSP--------------TLTLERVQVLAQPISDHLPVAVEIRL 273 >gi|229587031|ref|YP_002845532.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] gi|228022081|gb|ACP53789.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] Length = 260 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 37/189 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN++ + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNINSIKTR----------------LNLLRNFLSKENPDILLLQEIKCETAK--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + ++ + +A+ + + +++ R Sbjct: 42 FPFDA----LSD---LPYNSYVHGQKSYNGVAI----ISKFPADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAFY------DNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFN 212 +I GDFN Sbjct: 144 KTIIGGDFN 152 >gi|126735979|ref|ZP_01751723.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] gi|126714536|gb|EBA11403.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] Length = 287 Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 64/214 (29%), Gaps = 56/214 (26%) Query: 1 MIRKYVLALVFFLVPCTASVAQK--VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR 58 M+ VL VP A +R+ S N+ +E L Sbjct: 60 MLAAAVLLGAGTTVPMLVGTADADDLRIYSKNM-WFGNRE---------------LDALA 103 Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ++ AD+V LQE+ P N + + H S + + IAV Sbjct: 104 ADIRDSGADVVTLQEVS---------PTNR-PMLADLRDIYPHQHLCSFSGWN-GIAVLS 152 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + V + R + + +WV +HL + Sbjct: 153 REPIV------------QTKCSHRRAVAAAQINMGQGPVWVASVHL-----SWPFPYGNA 195 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 S + S + L+ P V+AGDFN Sbjct: 196 RSAEVASDVLETLES----------PVVMAGDFN 219 >gi|300770191|ref|ZP_07080070.1| probable secreted protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762667|gb|EFK59484.1| probable secreted protein [Sphingobacterium spiritivorum ATCC 33861] Length = 258 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 95/297 (31%), Gaps = 69/297 (23%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFL 71 F + Q ++++S+NI + D + + + AD+V L Sbjct: 14 FTLCSPVFGQQPLKILSYNI----HHGNPPSKPGVI-----DLEAIAKVIRTSGADVVGL 64 Query: 72 QE----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 QE + +A++ + F+S + I+ K + I + + Sbjct: 65 QEIDVNVGRSENVDQAKKLAELAGMEYY--FFS--KGIDLEKGEYGTVILSKFPITNTER 120 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 L+ P+ S A + +GK+I + HL L+ + Sbjct: 121 --LELPMPVKSEMRSLGIAKIKI-------PSGKEILFANTHL-------DLKEENRIA- 163 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 Q +++ + +++ V+ GD N + + I + + + Sbjct: 164 -----QTKFI---VNHFQDTKHLVVLVGDLNAQ--------PQSEPIKILGNFFKRSEIT 207 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + N + ID+ +++++ E Y SDH P+ Sbjct: 208 NGFTIPEVNPTRE--IDFIMVNKSKNPKFQNHKVIEESYA-----------SDHRPV 251 >gi|169832807|ref|YP_001695419.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae Hungary19A-6] gi|168995309|gb|ACA35921.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae Hungary19A-6] Length = 284 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 65/211 (30%), Gaps = 38/211 (18%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-MGSYNAVA 81 K+ + +WNIN S ++ ++DIV L E + N Sbjct: 3 KMTVSTWNINQRSGTGKGKQIP----------EMIVHELAKQNSDIVCLTEYVKGKNHSE 52 Query: 82 --KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + + +F E + + I T + ++ +P Sbjct: 53 FCEQLKSLGYSLFMYPEHIKKFQN-EVLIAIKTKFVTLPRITTFPEEEFPDF-------- 103 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS-----PSCSLLSQQAQWLKDW 194 + L ++ G + ++ +K D+L Q +++ ++ Sbjct: 104 ------LHLQIDFEGAPLHIIGARIKIADIDDTLPYKRKLPLLVKDAKERLLQIEYITEY 157 Query: 195 ITQKKESLVPFVIAGDFN--RKINYLGNNDD 223 + +K + ++ GDFN + + Sbjct: 158 V--RKLNG-NILLMGDFNNFHYFEHQKIDSW 185 >gi|163789004|ref|ZP_02183448.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159875668|gb|EDP69728.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 332 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 104/303 (34%), Gaps = 61/303 (20%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS--DYTLLRQYAKNLDAD 67 F + + L+S+N V +K V + T +++ +++ D Sbjct: 78 FQFSLNTNIKTKDSISLISYN---------VRSFKQPVHSDSQQNAITEIKKIVDSINPD 128 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+ LQE + K +F + + T + + K ++ + Sbjct: 129 ILLLQESSYKEGLR---IKGYSNVFLGYRKDVQK----------TLLTIYSKYP-IINKG 174 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF--------LDSLENTYSP 179 + D+++ A+ ++I + + + HL+SF F + + Sbjct: 175 FIDFS--DTYNN-----AIFADLKIKQDTVRIYNTHLQSFVFAPHIIADKYNDYNYLSNL 227 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + S +S+Q + K +S +I GDFN +Y K ++ + + Sbjct: 228 N-STISKQVEQAKLVKNHASKSNSKVIICGDFNAT-SYSQPYRILKKELNDS-----YVS 280 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + LR + +DYF+ D+ K+ LSDH PI Sbjct: 281 NGNGFGATYSLLRYPLRLDYFLSDKQIEVLSH--------------KNFDFNLSDHEPIY 326 Query: 300 IDY 302 I + Sbjct: 327 IKF 329 >gi|302383754|ref|YP_003819577.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] gi|302194382|gb|ADL01954.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] Length = 319 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 86/308 (27%), Gaps = 71/308 (23%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-------DYTLLRQYAK 62 ++ T + + W ++ ++ D + + + Sbjct: 61 LWVAAAATGLTLLVLAVAGW-PQWFPPTGTAAVGAPEFSLYSANVWVGNTDVGGMARSIE 119 Query: 63 NLDADIVFLQEMGSYNAVA--KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ADIV L E+G A ++ + + N + + A R Sbjct: 120 AAGADIVVLVEVGDTPAGQMDRIVGAYPYRV------TGNRNPGKKGPSRYV-FASR--- 169 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 +PL + L+ E + ++ +HL + + + Sbjct: 170 -------WPLRTVQVHAEELDAHG---LVAETPLGPVTLVGVHL-TRPWPYQYQWGQII- 217 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QA+ L +W +K P + AGDFN ++ + I LI Sbjct: 218 ------QARGLANW---RKAYSGPMIFAGDFN-----SVSSARIGRQIQAETGLI----- 258 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL-----SDH 295 + + I + +Y D+ +RL SDH Sbjct: 259 -PAPGWPGTWHS---------AMPSPAAMTIDQ-----VYRSPDLALLDRRLGRGNGSDH 303 Query: 296 CPISIDYD 303 P+ + Sbjct: 304 RPVITRFT 311 >gi|257466188|ref|ZP_05630499.1| Endonuclease/exonuclease/phosphatase [Fusobacterium gonidiaformans ATCC 25563] Length = 265 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 40/202 (19%) Query: 24 VRLVSWNI-NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++L++ N+ + L E++ LL + D++ LQE+ Sbjct: 1 MKLLTINVHSWLEEKQ------------EEKMELLAKVIAEKRYDVIALQEVNQKIEARL 48 Query: 83 VFPKNT-----WCI------FYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPL 130 + + + + + + + S DI+ IA+ ++ + ++ + Sbjct: 49 LKGEIREDNFLYQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYC 108 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 +K +S + +R+ V++ +EI GK+I H+ P C + + + Sbjct: 109 TNSKTVYSIS-SRKIVKIFLEIEGKEIEFYSCHM------------NLPDC--IEENMEQ 153 Query: 191 LKDWITQKKESLVPFVIAGDFN 212 I + ++ GDFN Sbjct: 154 NIQNILKHSSRNCLKILMGDFN 175 >gi|114798068|ref|YP_760636.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] gi|114738242|gb|ABI76367.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] Length = 258 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 88/304 (28%), Gaps = 79/304 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N + R + +L +AD+V LQE+ Sbjct: 1 MRIATWNVN------------SMKARLQTVLQVLTDI----NADVVCLQELKCETDA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP Y + + + +A L +PL S + Sbjct: 42 FP-------YLEIEELGWNCAVHGQKSYNGVA--------LLSKFPLQDVTREMSTLKDD 86 Query: 144 RAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +A + + K + V ++L + + Y + L+D ++ Sbjct: 87 QARYIEATVLTDKPVRVGGLYLPNGNPAPGPKYDYK------LEWVAALEDHARSLLKAE 140 Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR--------------CNAN 248 PFV+ GD+N D W N + P+ + + C+ Sbjct: 141 EPFVLCGDYN---AIPAPED-CWDDTVWNTDALGLPETRAAWRQLKHLGLTDAFEVCDGR 196 Query: 249 KNLR-------------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + I ID+ + L D + SDH Sbjct: 197 AHQYTFWDYQGGAFQKDHGIRIDHILACPRMTDRLTAIEIYRKARAMD-------KPSDH 249 Query: 296 CPIS 299 P+ Sbjct: 250 VPMI 253 >gi|15900492|ref|NP_345096.1| hypothetical protein SP_0582 [Streptococcus pneumoniae TIGR4] gi|149005694|ref|ZP_01829433.1| hypothetical protein CGSSp18BS74_09015 [Streptococcus pneumoniae SP18-BS74] gi|168490528|ref|ZP_02714671.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC0288-04] gi|307126786|ref|YP_003878817.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae 670-6B] gi|14972057|gb|AAK74736.1| hypothetical protein SP_0582 [Streptococcus pneumoniae TIGR4] gi|147762634|gb|EDK69594.1| hypothetical protein CGSSp18BS74_09015 [Streptococcus pneumoniae SP18-BS74] gi|183574895|gb|EDT95423.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC0288-04] gi|306483848|gb|ADM90717.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae 670-6B] Length = 333 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 92/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H +P L + Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH-------------TAPPLPGLMEIW 233 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 234 KQDLNIIHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|325923708|ref|ZP_08185327.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325545794|gb|EGD17029.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 251 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 38/267 (14%) Query: 40 VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 V + + KR T + + D+ QE+ A + R Sbjct: 7 VPVDTDGDKRWEVRRTAMVALIEQAHPDVFGTQELVEEQAQYLAAHLPAY-------RWF 59 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSY------PLLGAKDSFSRAGNRRAVELLVEI- 152 +R +D H + + + V++ P + S++ R A L E Sbjct: 60 GKGRRADGSDEHMGVFYDSRVLTVVESGDFWLSETPEIPGSSSWNTDLPRMATWALFERR 119 Query: 153 -NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 + ++ ++ + H F D E S ++ + L +P V+ GDF Sbjct: 120 SDKRRFYLFNTH---FAHRDQDEAAREHSARVILSRIATLPA--------DIPVVVTGDF 168 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI 271 N ++ ++T+ + + + + + +++ Sbjct: 169 N-----SDPDNGTYRTL----TAVLGDARAHATKRQGPEKTFQDFTTH---PTRRIDWIL 216 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ + + G SDH P+ Sbjct: 217 FRGLTPTRFSTLETRPGGILPSDHYPV 243 >gi|312868313|ref|ZP_07728513.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] gi|311096058|gb|EFQ54302.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] Length = 270 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 44/186 (23%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLIN---------- 100 + L++ D++ QE+ + V + S + Sbjct: 17 QQKFETLKEQILEAKYDVICFQEVNQEMSSEAVETDEFYQALPSAVAIHKDHFVRVLVEE 76 Query: 101 ------------HSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL 148 + ++ +A+ + L+ L+ D + RR Sbjct: 77 LAAQGLHYYWTWAYNHIGYDHLNEGVAILSRQP--LKADEILVSNMDDPTDYHTRRVAVA 134 Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW--LKDWITQKKESLVPFV 206 ++GK+I V +HL + D Q +W ++ + +Q PF+ Sbjct: 135 HTSVDGKEIAVASVHLS---WWDKG------------FQFEWPRIEKYFSQV---GKPFI 176 Query: 207 IAGDFN 212 +AGDFN Sbjct: 177 LAGDFN 182 >gi|91787259|ref|YP_548211.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] gi|91696484|gb|ABE43313.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] Length = 345 Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 68/231 (29%), Gaps = 39/231 (16%) Query: 66 ADIVFLQEMGSYNAVA----KVFPKNT-WCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V +QE+ S A+ + + + + L I I + Sbjct: 70 PDVVCIQEVESLIALREFNERFLAAAYPYAVVLDSRDLRQ---------IDVGILSKYPL 120 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI-HLKS----FCFLDSLEN 175 V K FS R +E+ + + L I H KS ++ Sbjct: 121 DSVATHVDDTAAGKYIFS----RDCLEVRLRVKKTAFVTLFINHFKSKLALGANEEARNR 176 Query: 176 TYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFNR-----KINYLGNNDDFWK 226 + + QA + + + F + GD N +++ L Sbjct: 177 ERAAANEKRQLQADTVAKLLKTRFPGAAFQSDYFAVLGDLNDTPLAPQLSRLCLKSGLVD 236 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + + R+ ++ + ++ +D+ ++ L Q + Sbjct: 237 ALAMLEPEERWTHYWKAKNSVSQ-------LDHVLLSPALAGKLKQNGITV 280 >gi|332161914|ref|YP_004298491.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605567|emb|CBY27065.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. palearctica Y11] gi|325666144|gb|ADZ42788.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859743|emb|CBX70078.1| exodeoxyribonuclease III [Yersinia enterocolitica W22703] Length = 268 Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 80/308 (25%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +V ++ + +FY H +A + + + + Sbjct: 45 EEV-SQHGYHVFY------------HGQKGHYGVA-----LLTKNEPLAVRRGFPTDEED 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + V++ F + + L+ ++ Q+ Sbjct: 87 AQRRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQLS 141 Query: 201 SLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPKE 240 + +I GD N I W N L+ + Sbjct: 142 ADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRA 201 Query: 241 KDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 + CN + ID + + I D + Sbjct: 202 ANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSME 254 Query: 291 RLSDHCPI 298 + SDH P+ Sbjct: 255 KPSDHAPV 262 >gi|221220202|gb|ACM08762.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 294 Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFV 261 +I GDFN +Y+ D I ++ + D+ N + + D V Sbjct: 127 DHIMILGDFNADGSYVTKGDMTNIRIRSDEKFHWVIGDDVDTTANTSNDHTY----DRIV 182 Query: 262 M-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 M + ++ S +++ S+ L SDH P+ ++ Sbjct: 183 MYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 227 >gi|163741731|ref|ZP_02149121.1| possible endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161384904|gb|EDQ09283.1| possible endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 400 Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 85/335 (25%) Query: 25 RLVSWNINTL-SEQEGVSLWKNSVKRT---TSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + S+N+ L + +++ +D+ + LDADIV QE+ + Sbjct: 5 TMASFNVKNLIGPDQEYYKFQSYTPEEYAWKADW--MADQLLTLDADIVGFQEIFEEAPL 62 Query: 81 AKVFPKNTWCIFYSTERL-INHSKRDSNNDI-----HT-------AIAVRKKNVRVLQQS 127 ++ + + + SKR I +T A A + + Sbjct: 63 REIIAETDRRGHEANAASLPDRSKRYHRKAIFRKLAYTPYTEAKLAFAPNINDSETPGKR 122 Query: 128 YPLLGAKDSFS---------------------------------RAGNRRAVELLVEING 154 P L + R +R + + + G Sbjct: 123 RPGLAILSRYGFAEPVEIIQDLPQPLDIPMACLGGEEDAGYYTLRRLSRPIMRARIPVAG 182 Query: 155 KKIWVLDIHLKS--FCFLDSLE------------NTYSPSCSLLSQQAQWL-KDWITQKK 199 + V + HLKS F+ + + L + + + W+ ++ Sbjct: 183 QIFSVFNCHLKSKLGEFITPQGAPYPPETVLTAYDAGGRALGALRAALRRMAEAWVLRRM 242 Query: 200 -----ESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS----LIRFPKEKDSRC---NA 247 E P ++ GDFN N + + + I +A Sbjct: 243 ILDELEQNRPVMVLGDFNDGENAVSS-----EIISGETPFRNYSWMLRHGARHSGDRYSA 297 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE 282 ++ + ID F + KFL +S +++Y Sbjct: 298 EEDRHIRETIDKFRLRSAEKKFLK-KSLRDVVYTT 331 >gi|221198686|ref|ZP_03571731.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204948|ref|ZP_03577964.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221174739|gb|EEE07170.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221181137|gb|EEE13539.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 280 Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 41/195 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI G +D + LDAD++ LQE+ Sbjct: 26 GRDLRIATYNI-----HGGY----GPWHARAAD--RIAAVIDELDADVIALQEVP----- 69 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS---F 137 + R + I TA ++ + YP+ A+ F Sbjct: 70 ---LGGTRGPDVLAHLRDATGMHAAAGPTIDTA---ERRYGNAVLSRYPIRAARTLDLSF 123 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 + R A++ ++ + V+ HL L + Q Q L Sbjct: 124 HQREPRGALDADIDCRTGPLRVVATHL-------GLSARERSA------QVQRLLAAFDT 170 Query: 198 KKESLVPFVIAGDFN 212 +P ++ GD N Sbjct: 171 ---GAMPVILLGDIN 182 >gi|83814898|ref|YP_445086.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber DSM 13855] gi|83756292|gb|ABC44405.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM 13855] Length = 439 Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 12/161 (7%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-DYT----LLRQYAKNLDADIVFLQ 72 A +R+ +WN+ + + T + D + + + LDAD++ LQ Sbjct: 77 FPEADTIRVATWNLEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLVLQ 136 Query: 73 EMGSYNAVAKVF----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 E S + + S E + + + VR V Sbjct: 137 EAESEAFLQSFVEDRLGDTGYRFATSVESPTWYMNVVLLSRYPLGV-VRNYADVVTPIVG 195 Query: 129 PLLGAKDSFSRAGNRRAVELL-VEINGKKIWVL-DIHLKSF 167 + +++ + V + ++W L HLK+ Sbjct: 196 QEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAG 236 >gi|254522846|ref|ZP_05134901.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] gi|219720437|gb|EED38962.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] Length = 291 Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 45/295 (15%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 A+ ++++S+N+ T ++ E W + + + + ++ QE+ Sbjct: 31 AATPAPLKVMSFNVRTPADTEPGKRWPDRR-------DAMVKVILDAHPAVIGTQELVKE 83 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ------SYPLL 131 A + R +R + D H + K + + P + Sbjct: 84 QA-------DYLSEHLPGYRWFGEGRRGGSGDEHMGVFYDSKVLAIEASGNFWLSDTPDV 136 Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 ++ R L +G++ + +D HL + D E L+ ++ Sbjct: 137 PGSITWGNLYPRMVTWALFRRLEDGRRFYFMDTHLP---YRDEDEPRRVKGAELIGKRLA 193 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L +P V+ GDFN + G + + + + + Sbjct: 194 TLPA--------DLPVVLTGDFNSEPG--GETYKAFTRVLQDTRT-----QVKAPQGPRL 238 Query: 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ +++ F+ + DD + G SDH P+ ++ D+ Sbjct: 239 TFH-----DFTGKATVQLDWVLVRGFTARSFLTDDRRIDGVLPSDHFPLVVELDW 288 >gi|34581351|ref|ZP_00142831.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262736|gb|EAA26240.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 260 Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 37/189 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN++ + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNINSIKTR----------------LNLLRNFLSKENPDILLLQEIKCETAK--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + ++ + +A+ + + +++ R Sbjct: 42 FPFDA----LSD---LPYNSYVHGQKSYNGVAI----ISKFPADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAFY------DNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFN 212 +I GDFN Sbjct: 144 KTIIGGDFN 152 >gi|330959493|gb|EGH59753.1| hypothetical protein PMA4326_13159 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 370 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 20/190 (10%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 R V+ + L K F R + +GK + +H+ Sbjct: 96 FLSRDSAVQYEDGAVSFLDRKHVFMREP--YSARFKSLSDGKTFALATVHIIYG----KS 149 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 +P L +WL+ P ++ GDFN + +D ++++ + Sbjct: 150 AADRTPELKELGNYWEWLEQ-----VYPGEPIMLMGDFN-----MPPSDPAFESL-RTRA 198 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-L 292 + + +N + R D +Q+A + G+R + Sbjct: 199 IPMVTDG--ASTLSNTSGRFANLYDNVFANQSARSMMSGVGIVNYPLMLKVSHEDGRRAV 256 Query: 293 SDHCPISIDY 302 SDH P+ Sbjct: 257 SDHAPVFFQL 266 >gi|327349957|gb|EGE78814.1| DNA lyase Apn2 [Ajellomyces dermatitidis ATCC 18188] Length = 642 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 21/95 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 VRL +WN+N + W R + + LDADIV QE + K Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETK----IQKK 49 Query: 83 -----VFPKNTWCIFYSTERLINHSKRDSNNDIHT 112 + N W F+S L + K S I+T Sbjct: 50 DLQDDMVLVNGWDCFFS---LPKYKKGYSGVVIYT 81 >gi|326495490|dbj|BAJ85841.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 460 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 77/208 (37%), Gaps = 27/208 (12%) Query: 11 FFLVPCTASVAQKVRLVSWNI---NTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDA 66 F + S + ++S+NI N + L R S L+ ++ D+ Sbjct: 78 VFADEASTSGSDACTIMSYNILADNNARNHPDLYLDVPWDALRWDSRRRLIIHEIRHWDS 137 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ + +A + + + + + +R+L++ Sbjct: 138 DLVCLQEVDRFREIAAEMKSKGYECSFKGRTGDAKDGCATFW--------KSERLRLLEE 189 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL-DIHLKSFCFLDSLENTYSPSCSLLS 185 + + A L+ E+NG + +VL +IH+ F + +L Sbjct: 190 DSIDFSEFNLRNNV----AQVLVFELNGTQKFVLGNIHV---LFNPKRGDVKMGQIRMLL 242 Query: 186 QQAQWLK-DWITQKKESLVPFVIAGDFN 212 ++A L W +P V+AGDFN Sbjct: 243 ERANALAGKW------DGIPIVLAGDFN 264 >gi|238650992|ref|YP_002916848.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238625090|gb|ACR47796.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 260 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 37/189 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WNIN++ + LLR + + DI+ LQE+ A Sbjct: 1 MKIATWNINSIKTR----------------LNLLRNFLSKENPDILLLQEIKCETAK--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + S + ++ + +A+ + + +++ R Sbjct: 42 FPFDA----LSD---LPYNSYVHGQKSYNGVAI----ISKFPADEIIKDFPNNYCSDQAR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +E+ + + ++ ++ + F+ S + + ++++ KK Sbjct: 91 F-LEIKLSLPIGFCNIISLYAPNGSFVGSDKFVAKLAFY------DNFINYLSTKKSFDE 143 Query: 204 PFVIAGDFN 212 +I GDFN Sbjct: 144 KTIIGGDFN 152 >gi|171318391|ref|ZP_02907548.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171096399|gb|EDT41299.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 269 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 47/204 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI + G W + Q LDAD++ LQE+ Sbjct: 20 PAAAPGGRDLRIATYNI-----RGGYGAWHTRAA------DRIAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYP 129 ++ H + + + R N + + Sbjct: 69 P--------LGGT------HAHDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPVR 114 Query: 130 LLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D F + R A++ ++ + I V+ HL L + Q Sbjct: 115 AARTLDLSFHQREPRGALDADIDCSAGTIRVVATHL-------GLSARERSA------QV 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 Q L +P ++ GD N Sbjct: 162 QRLLAAFDT---GAMPVILMGDIN 182 >gi|167628004|ref|YP_001678504.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598005|gb|ABZ88003.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 258 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 82/273 (30%), Gaps = 65/273 (23%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 D D + +QE K + E+ D AV+K Sbjct: 20 FTTQDVDFLCIQE-----------TKAQFHQLEKDEQHFPDGYYYDFKD-----AVKKGY 63 Query: 120 -NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + PL K+ + + + I ++L S D + Sbjct: 64 SGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYENFSI--ASLYLPSGSSGDVRQEYKM 121 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 122 ---QFLEKYKEIL----KEQTESGRDFIVCGDFN--IVHKEIDIKNWKSNYDKTSGVLPE 172 Query: 239 KEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYKFLI 271 ++ + N+ IDY + ++ Sbjct: 173 EQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDKVV 232 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ES + +Y E+ SDH P++I YD+ Sbjct: 233 PES--DYVYKENWF-------SDHAPLTISYDY 256 >gi|86739888|ref|YP_480288.1| exodeoxyribonuclease III [Frankia sp. CcI3] gi|86566750|gb|ABD10559.1| Exodeoxyribonuclease III [Frankia sp. CcI3] Length = 304 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 96/305 (31%), Gaps = 65/305 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNA 79 + VR+ +WNIN ++ R L ++ + D+V LQE + +A Sbjct: 5 STDVRIATWNIN------------SAKARQ----ARLIEWLDRAEPDVVCLQETKLADDA 48 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 ++F ++ + + + +A+ ++ L F Sbjct: 49 FLELFDEDLFR--------RGYRVAHHGDGRWNGVAILSRDTLDDVARG--LPGDPGFPG 98 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 R + G +IW L + + +D Y + L++ + + Sbjct: 99 PEPR---AIAATCGGIRIWSLYV--PNGRTIDDPHYAYKLA------WLAALREVVAEAT 147 Query: 200 ESLVPFVIAGDFNRKINYLGNND-DFWKTIDPNDSLIRFPKEKDS-----RCNANKNLRN 253 + GDFN + D D W + P E+ + LR Sbjct: 148 TQG-AVMTLGDFN-----IAPTDVDVWDITQFEGATHVTPAERAALAELVDAGLIDVLRA 201 Query: 254 KIPIDYFVMDQNAYKFLIQESFS---EILYNEDDIKSRGKRL------------SDHCPI 298 + P D + + ++ ++ D+ R + + SDH P+ Sbjct: 202 RWPDDVVYTYWDYRQLCFPKNLGMRIDLALATADVAGRVRAVWVDRAARKGVGTSDHAPV 261 Query: 299 SIDYD 303 +D D Sbjct: 262 IVDLD 266 >gi|119383680|ref|YP_914736.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] gi|119373447|gb|ABL69040.1| Exodeoxyribonuclease III [Paracoccus denitrificans PD1222] Length = 261 Score = 40.1 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 74/307 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ ++NIN R L + D+V LQE+ A + Sbjct: 1 MKIATFNIN------------GVRAR----IETLTGWLSEAQPDVVVLQEI---KAQDEG 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP+ + ++ +A+ K D +R Sbjct: 42 FPR-------EPIADLGYNIETHGQKGFNGVAILSKLPLEDVSRGLPGDETDEQAR---- 90 Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWLKDWITQKKES 201 + + + + + ++L + + Y + L +A+ L + Sbjct: 91 ---YIEATVVGHRAVRIAGLYLPNGNPQPGPKFDYKLAWMERLRARAKAL-------LAT 140 Query: 202 LVPFVIAGDFN-----RKINYLGN--NDDFWKTID------------PNDSLIRFPKEKD 242 +P + GD+N R + +D ++ + +R P Sbjct: 141 EMPVAMMGDYNVIPESRDAAFPEKWLDDALFQPESRAALRRILFDGWADAVRLRHPGSTR 200 Query: 243 SRC-----NANKNLR-NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 A R N I ID+ ++ A LI D + + SDH Sbjct: 201 GPFTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGI-------DRDERAKDKPSDHV 253 Query: 297 PISIDYD 303 P+ +D D Sbjct: 254 PVWVDLD 260 >gi|313139689|ref|ZP_07801882.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313132199|gb|EFR49816.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 371 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 64/218 (29%), Gaps = 32/218 (14%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 +D + ++ +++ LQE + + K+ + I + +S+ S++ + Sbjct: 159 HADAKAIVDIVRDQRVEVLALQETTNDF-IKKL---DEAGIH----SYLPYSQVSSSDGV 210 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + P+ + S A + ++ + +H + Sbjct: 211 Y-----GNGIWSATELGRPVDD--EVGSSASFMPGGTVTFGGGKAQLRFVSVHTTAPIPG 263 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S L + + + +V GDFN ++ + Sbjct: 264 YWSRWKRS------------LDELASMRSREGSRYVFMGDFNATTDHTPFRNILGNRFSD 311 Query: 231 ND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 S F S ID+ V+D++ Sbjct: 312 AARQSGHGFTFTWPSNKLPLPRF---AGIDHIVLDKDI 346 >gi|269960966|ref|ZP_06175335.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] gi|269834185|gb|EEZ88275.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] Length = 268 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 78/275 (28%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQALIDKHQPDVIGLQEI-------KVHDEA---FPIEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ +Q+ +P + R + + N +K+ VL+ + D++ Sbjct: 67 MLCKQEPISVQKGFPTDNEEHQK-----RMIMATFEDENEEKVTVLNGYFPQG---DNIA 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q + L ++ + ++ GD N I N W Sbjct: 119 HETK---YPYKRQFYKDLMTYLNNHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L ++ + + R ID + Sbjct: 176 GKCSFQPEEREWLQTLLDWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + K I+ + D ++ SDH PI Sbjct: 236 PSLAKKCIES-------DIDYELRGIEKPSDHAPI 263 >gi|332076419|gb|EGI86882.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA41301] Length = 333 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 92/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 V + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELVTNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|321249742|ref|XP_003191557.1| phospholipase C [Cryptococcus gattii WM276] gi|317458024|gb|ADV19770.1| phospholipase C, putative [Cryptococcus gattii WM276] Length = 529 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 61/177 (34%), Gaps = 23/177 (12%) Query: 45 NSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYST-ERLINHSK 103 + +RT + +Y + DIV LQE+ + K + + + + S+ Sbjct: 28 SKDRRTR--IQAIAEYMASSSYDIVCLQEL----WIYK-----DYEVVREEVQGNLPFSR 76 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAKDSFSRAGNRR-----AVELLVEINGKKI 157 + + +A+ + + + P L + + AG+ +++ ++ Sbjct: 77 FFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAGNVVILHPVLGEV 136 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + H+ + + + Q+ L + + + GDFN + Sbjct: 137 EIWNTHMHA---AGEHPPDTRQAHRI--AQSWQLANAVRGGAAKGRYVFVMGDFNSQ 188 >gi|237710201|ref|ZP_04540682.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA] gi|229455663|gb|EEO61384.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 9_1_42FAA] Length = 306 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 100/320 (31%), Gaps = 51/320 (15%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTL------SEQEGVSLWKNSVK-----RT 50 ++K +L L + + R++ +N+ L + + ++ K R Sbjct: 1 MKKTILFLCLCYLVGVTYAQEPFRVMFYNVENLFDCQHDTLKNDYEFLPDAPKGWTQARY 60 Query: 51 TSDYTLLRQYAKNLD----ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINH 101 + + D+V L E+ + + + + + + + Sbjct: 61 HDKLARIAKVIIATGEENVPDLVGLCEVENDHCLKDLTENSPLREAGYRYVMTDSP---- 116 Query: 102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVL 160 I A+ ++ +++ ++ + K+ R R + + ++ +G + V Sbjct: 117 ----DERGIDVALLYQRGTFKLVGKNCISVPYKEI-ERRPTRDILHVTGQVASGDTLDVF 171 Query: 161 DIHL--KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYL 218 H+ ++ S + +L A + + ++ V +I GDFN +Y Sbjct: 172 VCHMPSRAGGEEKSEPYRLFTA-QILKIAADSV---MNIRQHPNV--MIMGDFN---DYP 222 Query: 219 GNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQ 272 NN K + + D R R + +D ++ L Sbjct: 223 TNNS-IAKVLGAVAPKSGVQAKKLYNLMDGRKEGTYRYRGEWGVLDQLIVSG---FLLQG 278 Query: 273 ESFSEILYNEDDIKSRGKRL 292 Y++ I L Sbjct: 279 HDSMRTSYDKAQILKYPFLL 298 >gi|228471546|ref|ZP_04056321.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] gi|228277122|gb|EEK15802.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] Length = 253 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 56/260 (21%) Query: 65 DADIVFLQEMG------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 D D++ LQE+ A+ ++ T+ F+S E+ ++ +A+ Sbjct: 27 DPDVICLQEIKALESQIDLPALEEI--GYTYHYFHSAEKKG-----------YSGVAILS 73 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 K + + D R ++ + + ++ ++L S +D L++ Sbjct: 74 KTAPTQVEVGAGIDYMDREGR---------ILRADYGDLSIMSLYLPSGTNIDRLDH--- 121 Query: 179 PSCSLLSQQAQW-LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL--- 234 Q +++I + K++ +I GD+N + +D + + + L Sbjct: 122 ------KLQFMADFQNYINELKKTHPNLIICGDYNICHEAIDIHDPV-RNANVSGFLPVE 174 Query: 235 -IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF-----------LIQESFSEILYNE 282 S + +K P +Y A L+ + L Sbjct: 175 RKWLDDFLKSGFIDSFRFFHKEPHNYSWWSYRANARANNKGWRIDYCLVAQPLENRLLRA 234 Query: 283 DDIKSRGKRLSDHCPISIDY 302 + SDHCPI ++ Sbjct: 235 AILPEAKH--SDHCPILVEI 252 >gi|194383744|dbj|BAG59230.1| unnamed protein product [Homo sapiens] Length = 231 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 27/158 (17%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 L Y D++FLQE+ P + + TAI Sbjct: 3 RALNSYLALYSPDVIFLQEV---------IPP--YYSYLKKRSSNYEIITGHEEGYFTAI 51 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 ++K V++ Q + R + + V ++G ++ ++ HL+S Sbjct: 52 MLKKSRVKLKSQEIIPFPSTKM-----MRNLLCVHVNVSGNELCLMTSHLES-------- 98 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 T + ++Q LK Q+ + AGD N Sbjct: 99 -TRGHAAERMNQLKMVLKK--MQEAPESATVIFAGDTN 133 >gi|119484378|ref|ZP_01618995.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] gi|119457852|gb|EAW38975.1| Endonuclease/exonuclease/phosphatase [Lyngbya sp. PCC 8106] Length = 331 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 106/309 (34%), Gaps = 56/309 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL---LRQYAKN-LDADIVFLQEMG-- 75 + ++++NI LS +VKR + L A +AD + LQE+ Sbjct: 52 ETYTVITYNIGYLS----GLTNNQAVKREKVLFDENLELAIAALKPFNADFIALQEVDFA 107 Query: 76 -----SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI-------AVRKKNVRV 123 N V ++ + + + N+ I+ A+ + Sbjct: 108 SQRSYDVNQVQELATALKFPVQATAINWDNNYVPFPTFPIYAHFGKMLSGQAILSRYPIE 167 Query: 124 LQQS--YPLLGAKDSFSRA--GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 L + + K + A +R A ++I + ++++HL++F D Sbjct: 168 LNERIVLEQVTNKPFYENAFYLDRLAQVSRIKIANHILILINVHLEAF---DQPTR---- 220 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSLI 235 L Q L+ +++ P ++ GDFN +IN + F T + Sbjct: 221 ----LKQSQFVLELFLS--FSQKYPVLLIGDFNSEPPSEINLEPTINLFLNTPGIQSAFP 274 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ++ IDY +QN + + + ++IL SDH Sbjct: 275 PKTLNHPENGTYPSDQPHRT-IDYIFYNQNKIEAIEWQVVTDILA------------SDH 321 Query: 296 CPISIDYDF 304 P+ + + F Sbjct: 322 LPVVMKFRF 330 >gi|254390461|ref|ZP_05005677.1| hypothetical protein SSCG_03230 [Streptomyces clavuligerus ATCC 27064] gi|294816740|ref|ZP_06775382.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] gi|326445641|ref|ZP_08220375.1| hypothetical protein SclaA2_31472 [Streptomyces clavuligerus ATCC 27064] gi|197704164|gb|EDY49976.1| hypothetical protein SSCG_03230 [Streptomyces clavuligerus ATCC 27064] gi|294321555|gb|EFG03690.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] Length = 355 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 29/206 (14%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYN 78 +++R +WNI G S R +L L D++ LQE G + Sbjct: 4 GRQLRAGTWNI-----LCGGLGPDGSENRLRKQTEVLAA----LRPDVLALQECSYGGHQ 54 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS-F 137 ++ + R ++ TA+ R++ R++ + P Sbjct: 55 GECRLLGLAD---ALGMTPVAMEPSRVGDSLNFTALLYRREKPRLVDRRRPAAQIFHHAL 111 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 RA R + + + + VL HL +++ + L++ WL D Sbjct: 112 IRARFRP---VDAGDDSRDLLVLATHL-----------SHAGGTARLAEVGSWLTDHAGD 157 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD 223 + ++ GD N + + D Sbjct: 158 FPGAPRRSILMGDLNCSGFHDPDPDW 183 >gi|148556689|ref|YP_001264271.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] gi|148501879|gb|ABQ70133.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] Length = 285 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 40/190 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+++ SWNIN R D +RQ+ + DI+ LQE Sbjct: 25 KLKIASWNIN--------------SVRARIDI--VRQFLEEQQIDILCLQETK------- 61 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 +T+ + +H + +H +A+ + + G D Sbjct: 62 -VRDDTFPFGMFRDLGYDH-FEINGQPMHHGVAI------ISKLPLHDHGRHDWQDNGEA 113 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R V + ++ I + ++++ + D + +P Q+ +L I +E Sbjct: 114 RH-VGVRLDCG---IRLENVYVPAG--GDIADREVNP---KFGQKLDFLGRMIRWSEELR 164 Query: 203 VPFVIAGDFN 212 P ++ GDFN Sbjct: 165 EPTLLVGDFN 174 >gi|78355714|ref|YP_387163.1| hypothetical protein Dde_0667 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218119|gb|ABB37468.1| hypothetical protein Dde_0667 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 338 Score = 40.1 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 36/211 (17%) Query: 36 EQEGVSLWKNSVKR-TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + R D+ L + + D D+V +QE + Sbjct: 96 PSGARIRVLSCNLRVGEVDFEALSRVVREYDVDVVAVQE------------------YIG 137 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 RL D IAV + + ++ L A + R AV + Sbjct: 138 DRRLTLPEGWQGKRDGQ--IAVYSRFPLQVGEALKLHRAGHKWKRQTVLPAV---IRTPA 192 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSP-----SCSLLSQQAQWLKDW-ITQKK---ESLVPF 205 + +HL S + +L Q ++ + + +++P Sbjct: 193 GPVAFFAVHLPSPRYGLQHLLDRRKLINPEKAGMLEAQTGAREEASMLARAMVDRAVLPV 252 Query: 206 VIAGDFN-RKINYLGNNDDFWKTIDPNDSLI 235 ++AGDFN + +Y+ +W + L+ Sbjct: 253 IVAGDFNLPRESYIFRR--YWSDMSDASVLL 281 >gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] gi|158433102|gb|EDP11391.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] Length = 252 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 78/303 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++LVSWN+N + +K+ D+ + +DADI +QE K+ Sbjct: 1 MKLVSWNVNGIRA---------CMKKGFMDF------FQAIDADIFCIQE-------TKM 38 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 P + T+ + + ++ + V K + + D R Sbjct: 39 QPG---QLEIETDGYVQYMNSADKKG-YSGVMVFSKKEPLSVSYGLGIDEHDHEGR---- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 ++ +++ ++ +S + + Q + Q+ + Sbjct: 91 -----VITCEYDTFYLVCVY-----TPNSKDGLLRLDYRM---QWEDAFRAYLQRLKESK 137 Query: 204 PFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 V+ GD N R + + T+ + + + + N Sbjct: 138 SVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKMTTLLSSGFVDSYRYLYPDKENVY 197 Query: 249 KNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + IDYF++ ++A + + + +Y SDHCP+S Sbjct: 198 SWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQIHTDIYG-----------SDHCPVS 246 Query: 300 IDY 302 + + Sbjct: 247 LSF 249 >gi|90409692|ref|ZP_01217709.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] gi|90329045|gb|EAS45302.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] Length = 292 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 89/307 (28%), Gaps = 30/307 (9%) Query: 6 VLALVFFLVPCTASV-AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL-RQYAKN 63 +L L + + A ++S+N+ + ++ VS T + + + Sbjct: 7 LLTLSLLAISGSLPAIADDFNVMSFNVR--NSKDSVSGSIYDGNNTWENRKKIVTSIFHD 64 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + DI LQE S + + N + V+ Sbjct: 65 QNIDIAGLQEPFSDQIMYLARNLPEYSWVGVGRDDGNAKGEAVPIFYRSDKYVKLSGGTF 124 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLENTYSPSC 181 P L A + R + + +E G VL + H F + S Sbjct: 125 WLSKTPELVASIGWDAELTRISTWVRLEEKGTGKRVLVFNSH-----FDHIGKVARQESA 179 Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 L+S +A+ + + ++ GD N + + + + + P + Sbjct: 180 KLMSDRAKEIIG------DGNDAVIVLGDLNFERTDTVSYHAITNLFNDAREITKAPFKG 233 Query: 242 DSRCNANKNLRN----KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 A IDY ++ S + + ++ G SDH Sbjct: 234 ADNGKAYTYHGYGNAPSEDIDYIFVND---------SLTVNTFEYKNVIRDGIYSSDHLS 284 Query: 298 ISIDYDF 304 + + F Sbjct: 285 VISNMSF 291 >gi|87116466|dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSP--SCSLLSQQAQWLKDWITQKKESLVPFV 206 ++ N + I L H CF+ + C + + L + I P++ Sbjct: 81 VISHNSQAIHTLASHRLGNCFITFAYIRPNTFAKCR-FWEYCKQLANSIQS------PWM 133 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYF 260 + GD +N + +D+ W + N + ++ + S C ++ N I Sbjct: 134 VVGD----LNDIATSDEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNR 189 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 V+ + ++ +++ + E + + SDH PI Sbjct: 190 VVQRRRLDRVLWNVSAQLTFPEAKVSVLPRLCSDHNPI 227 >gi|87116459|dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSP--SCSLLSQQAQWLKDWITQKKESLVPFV 206 ++ N + I L H CF+ + C + + L + I P++ Sbjct: 81 VISHNSQAIHTLASHRLGNCFITFAYIRPNTFAKCR-FWEYCKQLANSIQS------PWM 133 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYF 260 + GD +N + +D+ W + N + ++ + S C ++ N I Sbjct: 134 VVGD----LNDIATSDEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNR 189 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 V+ + ++ +++ + E + + SDH PI Sbjct: 190 VVQRRRLDRVLWNVSAQLTFPEAKVSVLPRLCSDHNPI 227 >gi|332288793|ref|YP_004419645.1| conserved hypothetical protein, endonuclease/exonuclease/phosphatase family [Gallibacterium anatis UMN179] gi|330431689|gb|AEC16748.1| conserved hypothetical protein, endonuclease/exonuclease/phosphatase family [Gallibacterium anatis UMN179] Length = 291 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 66/289 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 T S Q ++L+ WN+ E +G +LL Y + D + LQE S Sbjct: 67 TISTTQPLKLLVWNV-HKGEDQGWQ-------------SLLLNYEEKT--DFMLLQEATS 110 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + ++ +F S + D+ + +A Q Y + Sbjct: 111 LQKLPQLLQHMPNQLFASG---------FAYRDMQSGVA---TLSPFSPQYYCSAAVDEP 158 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + + NGK + ++++H+ +F + S Q L+ + Sbjct: 159 WLAIPKTSVSSVYPLDNGKFLLMINVHMVNFEWGTSAYR-------------QQLEQIMQ 205 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI- 255 Q ++ + +IAGDFN N D I E + + LR Sbjct: 206 QLQQRVDAVIIAGDFN-----AWNQDRV--AILQQKMAQFGLHEI--SFSPDNRLRFNGF 256 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 P+D+ + + + K+ SDH P+ ++ F Sbjct: 257 PLDHIFV----------KGLKAVSATTKKTKA-----SDHNPMWVELTF 290 >gi|223938834|ref|ZP_03630722.1| hypothetical protein Cflav_PD2054 [bacterium Ellin514] gi|223892532|gb|EEF59005.1| hypothetical protein Cflav_PD2054 [bacterium Ellin514] Length = 482 Score = 40.1 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 34/208 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 LA F L+ A +RL +WN + + + + T KNL Sbjct: 19 LAFCFCLLNVQ---ADTIRLTTWNF---APVLVGATNVSPQQVTEIRLQEAAVMLKNLHP 72 Query: 67 DIVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D++ LQ++ S +A+ T+ + + S + + AI R + Sbjct: 73 DVILLQQVTDWNSCKKLAQYLKPETYRVLTCS------SFKSAGGAQQVAILSRNPALIA 126 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 + + S + G A + + K + I + + S Sbjct: 127 WSEPWKNRS--QSVTAGGFAFAA---IRLGNKNVGFFTI-----------QQGDAASAKQ 170 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDF 211 L Q ++W + VIAG+F Sbjct: 171 LLGQIDSFRNWTANRA---EAMVIAGNF 195 >gi|229365908|gb|ACQ57934.1| Deoxyribonuclease gamma precursor [Anoplopoma fimbria] Length = 324 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 83/263 (31%), Gaps = 38/263 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVA---------KVFPKNTWCIFYSTERLINHSKR 104 + L + DI+ + E+ + + KV + + + ST N K Sbjct: 22 LSALVKIVSRY--DIIVILEVVDVSGASVEIFLEELNKVNTTHHYALQLSTRLGRNRYKE 79 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING---KKIWVLD 161 + + + +V L SY + + A R L + K I ++ Sbjct: 80 QF-------LFLYRDDVVDLIDSYQYEDNQVNDVDAFLREPYILYFKPRNTVLKDIVLIP 132 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 +H S +T L W +I GDF Y+ +N Sbjct: 133 VH-------ASPLHTERELDELYDVFLVVRDKW------KTDNIMILGDFKADGVYVTDN 179 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 I + + + + N + I V ++ L+ S ++ Sbjct: 180 KMKDIRIRSDKNFHWLIGDDVDTTSNTANHYSYDRI--VVYGEDMLSALVPNSAKPFNFH 237 Query: 282 EDDIKSRGKRL--SDHCPISIDY 302 ++ + + K L SDH P+ ++ Sbjct: 238 KEFVMTEEKALRVSDHYPVEVEL 260 >gi|78046333|ref|YP_362508.1| hypothetical protein XCV0777 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928431|ref|ZP_08189622.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78034763|emb|CAJ22408.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541148|gb|EGD12699.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 255 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 64/299 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSD-YTLLRQYAKNLD 65 AS ++ +R+++ NI S KRT+ D L + Sbjct: 1 MNASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVG-----E 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE ++ F T + + ++ N + +A + Sbjct: 56 RDIVGLQE-ADPGSLRSGFTNQTH--YLAERAGFDYWSHQPNRRMG-GVASSANGLLSKL 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + R G R + + V HL + + L+ Sbjct: 112 EPVEVQDHA-LPGRIGGRGILLAKFGEGRDGLAVAVAHLSLG---------ANSRMAQLA 161 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ L D ++ GDFN + + SL R + + C Sbjct: 162 FIAELLSD--------HPNAMLMGDFN-----CMADRPEMQ------SLYRHTRLQPPSC 202 Query: 246 NANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ID+ ++ +I+ + ++ SDH + +D Sbjct: 203 EVHTFPSWRPDRAIDHILVSD---SLVIEHT-----------EAIPAAFSDHLAVGMDI 247 >gi|58259579|ref|XP_567202.1| phospholipase C [Cryptococcus neoformans var. neoformans JEC21] gi|134107017|ref|XP_777821.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260519|gb|EAL23174.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223339|gb|AAW41383.1| phospholipase C, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 529 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 69/214 (32%), Gaps = 28/214 (13%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 LS + +RT + Y + DIV LQE+ + K + + Sbjct: 17 LSFNVWGLAIVSKDRRTR--IHAIADYLASSSYDIVCLQEL----WIYK-----DYEVVR 65 Query: 94 ST-ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP-LLGAKDSFSRAGNRR-----AV 146 +R + S+ + + +A+ + + + P L + + AG+ A Sbjct: 66 EAVQRNLPFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAAN 125 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 +++ ++ + + H+ + + + Q+ L + + Sbjct: 126 VVILHPVLGEVEIWNTHMHA---AGEHPPDTRQAHRI--AQSWELANAVRGGAAKGRYVF 180 Query: 207 IAGDFNRK-----INYLGNNDDFWKTIDPNDSLI 235 + GDFN + I + ++ + Sbjct: 181 VMGDFNSQPWSIPIAMMRDHAQLMDSFGQVHPST 214 >gi|207723157|ref|YP_002253556.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] gi|206588351|emb|CAQ35314.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] Length = 289 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 65/215 (30%), Gaps = 50/215 (23%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNA-VAKV 83 +++WNI + + R D + A + DI+ LQE+ S + Sbjct: 5 ILTWNIQW---------GRGADGR--VDLPRMLAEAHAMGPFDILCLQEVTSGFGHLPGQ 53 Query: 84 FPKNTWC----------IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + W L H + AI R + V++ + P Sbjct: 54 PGDDQWRELAGALGHAFTLIDGIALERHEGTRIQRFGN-AIVTRLPVLHVMRHALPCPAD 112 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 S R A+E V+ + V+ HL+ + ++ + L ++ Sbjct: 113 ---TSPTMPRMAIEATVQAPFGPLRVISTHLEY--YSETQRIAQIDALRALH-----VEG 162 Query: 194 WIT----------------QKKESLVPFVIAGDFN 212 W+ + VI GDFN Sbjct: 163 WMRVAHPPTLGPEPADGPFRPLAQTHATVICGDFN 197 >gi|261406650|ref|YP_003242891.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] gi|261283113|gb|ACX65084.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] Length = 272 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 84/260 (32%), Gaps = 52/260 (20%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT--------WCIFYSTERLINHSKRD 105 + ++ A+IV LQE+ + F + Y + + Sbjct: 54 LQRIADVIRDSGAEIVGLQEVDRHYGERSDFKDQAKELADLLGYHYAYGANLDLEPGEGQ 113 Query: 106 SNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 +NN + TAI + +R G + R + +V + G + V + HL Sbjct: 114 TNNRQYGTAIVSKYPILRSENTWLSSFGKEQ-------RGVLHAVVNLRGIHVDVYNTHL 166 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 L+ T + QAQ + I S P ++ GDFN + Sbjct: 167 -------GLDVTSRTA------QAQEI---IDLASSSQGPALLMGDFN-----AEPDSSE 205 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 ++ + + + + D + IDY + N N+ Sbjct: 206 FQLLLNSGLFVNSFEGID-DAYTFPVINPSATIDYILTSPNVRHA-----------NQRV 253 Query: 285 IKSRGKRLSDHCPISIDYDF 304 I++ SDH PI+ D F Sbjct: 254 IQTEA---SDHLPIAADVVF 270 >gi|187933196|ref|YP_001884567.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] gi|187721349|gb|ACD22570.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] Length = 262 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 28/173 (16%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPK----NTWCIFYS---TERLINHSKRDS 106 L + + D + LQE+ S + AKV + + + + N++ Sbjct: 20 IKYLAKIISEKNYDAIALQEI-SQSIEAKVINNNLKVDNFAVLLKAELDKYNTNYNFFWD 78 Query: 107 NNDIHT-----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 + I +AV K+ V ++S+ + D R+ V++ E N + I + Sbjct: 79 FSHIGYGKYEEGLAVFTKHNIVNEKSFFISKGTDREY-WKTRKIVQVTFEYNNENIDLYS 137 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 HL + D E Q + L + + + + F GDFN Sbjct: 138 CHL--GWWEDEEE--------PFKYQVKRL---LEENTSNNITFF-MGDFNNN 176 >gi|110677635|ref|YP_680642.1| hypothetical protein RD1_0227 [Roseobacter denitrificans OCh 114] gi|109453751|gb|ABG29956.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 417 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 47/141 (33%), Gaps = 19/141 (13%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + +L + + ++ +R+ ++N L + L ++ V+ + + Sbjct: 67 RSLLLTAAISLNAACAWSETLRVATFNTG-LERKGPALLLRDIVRGEDAQIEAVASVLTT 125 Query: 64 LDADIVFLQEMG------SYNAVAKV---FPKNT-WCIF--------YSTERLINHSKRD 105 + DIV LQ + +A +KV + + + N + + Sbjct: 126 IAPDIVALQSFDYDLTGAALSAFSKVLRDVGLDYPYQFAALPNTGMRTDLDMDGNRRRAE 185 Query: 106 SNNDIHTAIAVRKKNVRVLQQ 126 + + + + +L + Sbjct: 186 ARDAQGYGFFSGQGGMAILSK 206 >gi|326506106|dbj|BAJ91292.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 345 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 77/208 (37%), Gaps = 27/208 (12%) Query: 11 FFLVPCTASVAQKVRLVSWNI---NTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDA 66 F + S + ++S+NI N + L R S L+ ++ D+ Sbjct: 78 VFADEASTSGSDACTIMSYNILADNNARNHPDLYLDVPWDALRWDSRRRLIIHEIRHWDS 137 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ + +A + + + + + +R+L++ Sbjct: 138 DLVCLQEVDRFREIAAEMKSKGYECSFKGRTGDAKDGCATFW--------KSERLRLLEE 189 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL-DIHLKSFCFLDSLENTYSPSCSLLS 185 + + A L+ E+NG + +VL +IH+ F + +L Sbjct: 190 DSIDFSEFNLRNNV----AQVLVFELNGTQKFVLGNIHV---LFNPKRGDVKMGQIRMLL 242 Query: 186 QQAQWLK-DWITQKKESLVPFVIAGDFN 212 ++A L W +P V+AGDFN Sbjct: 243 ERANALAGKW------DGIPIVLAGDFN 264 >gi|251792404|ref|YP_003007130.1| exonuclease III [Aggregatibacter aphrophilus NJ8700] gi|247533797|gb|ACS97043.1| exodeoxyribonuclease III [Aggregatibacter aphrophilus NJ8700] Length = 267 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 38/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKVMSFNINGLRARPH----------------QLEEIIDKYQPDVLGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + +NH + H +A + K+ +++ +P + Sbjct: 42 FP---YELVDHLGYHVNHYGQ----KGHYGVALLSKQAPLSVKKGFP------TDGEEAQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + +E ++ V++ F + + L+ ++ Q+ + Sbjct: 89 KRIIMIDLETPFGQLTVIN-----GYFPQGESRKHPTKFPAKQKFYADLQRYLEQEHNAE 143 Query: 203 VPFVIAGDFN 212 P +I GD N Sbjct: 144 NPVIIMGDMN 153 >gi|224126543|ref|XP_002329580.1| predicted protein [Populus trichocarpa] gi|222870289|gb|EEF07420.1| predicted protein [Populus trichocarpa] Length = 643 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 74/256 (28%), Gaps = 37/256 (14%) Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 E+ S +++ N I+ +I VRK+ R + Sbjct: 365 FLEVPSEQYYSEIIKDND-----DPRPKYVRIVSKQMVGIYVSIWVRKRLRRHINNLEVS 419 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--A 188 GN+ +V + + + ++ ++ HL S + + + C ++ + + Sbjct: 420 PVGVGLMGYMGNKGSVSVSMSVFQSRLCLVCSHLASGQKDGAEQRRNADVCEIIRRTRFS 479 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIRFPKEKD 242 L Q S GD N ++N L W + ND L + Sbjct: 480 SILDTNQAQTIPSHDQIFWFGDLNYRLNMLDTEVRKLVAMKQWDELINNDQLSKELCGGR 539 Query: 243 S-RCNANKNLRNKIPIDYFVMDQN------------------AYKFLIQESFSEILYNED 283 + Y + + + ++ Y Sbjct: 540 VFEGWKEGAINFPPTYKYEINSDTYVGENPKEGEKKRSPAWCDRILWLGKGIKQLSYKRS 599 Query: 284 DIKSRGKRLSDHCPIS 299 ++ RLSDH P+S Sbjct: 600 EL-----RLSDHRPVS 610 >gi|4204695|gb|AAD10828.1| putative inositol polyphosphate 5-phosphatase At5P1 [Arabidopsis thaliana] Length = 590 Score = 40.1 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 24/185 (12%) Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199 GN+ +V + + I L HL S D+ + + + ++ Q+L + + Sbjct: 379 GNKGSVSVSMSIYQTPFCFLCTHLSSG-EKDTDQEKRNDDVREIHRRTQFLPHSLNANEL 437 Query: 200 ----ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIR-FPKEKDSRCNAN 248 + + GD N +IN W+ + D L R K + Sbjct: 438 PRSICNHERIIWLGDLNYRINLSYEKTHELIARKEWQRLVKYDQLSREMTKGNLFEGWSE 497 Query: 249 KN----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCP 297 K ID ++ D I++N +K R LSDH P Sbjct: 498 GTLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHRP 557 Query: 298 ISIDY 302 ++ + Sbjct: 558 VTATF 562 >gi|294627673|ref|ZP_06706255.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667101|ref|ZP_06732326.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598025|gb|EFF42180.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603111|gb|EFF46537.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 255 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 64/299 (21%) Query: 16 CTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSD-YTLLRQYAKNLD 65 AS ++ +R+++ NI S KRT+ D L + Sbjct: 1 MNASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVG-----E 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE ++ F T + + ++ N + +A + Sbjct: 56 RDIVGLQE-ADPGSLRSGFTNQTH--YLAERAGFDYWSHQPNRRMG-GVASSANGLLSKL 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + R G R + + V HL + + L+ Sbjct: 112 EPVEVQDHA-LPGRIGGRGILLAKFGEGRDGLAVAVAHLSLG---------ANSRMAQLA 161 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 A+ L D ++ GDFN + + SL R + + C Sbjct: 162 FIAELLSD--------HPNAMLMGDFN-----CMADRPEMQ------SLYRHTRLQPPSC 202 Query: 246 NANKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + + ID+ ++ +I+ + ++ SDH + +D Sbjct: 203 DVHTFPSWRPDRAIDHILVSD---SLVIEHT-----------EAIPAAFSDHLAVGMDI 247 >gi|190348504|gb|EDK40965.2| hypothetical protein PGUG_05063 [Meyerozyma guilliermondii ATCC 6260] Length = 468 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 65/208 (31%), Gaps = 43/208 (20%) Query: 24 VRLVSWNINTLSEQEGVSL------WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +W + +S+ L N+V + DY DIV LQE+ Sbjct: 29 LTYNTWGLKYVSKYRRFRLCAIADRLANAVPGSQDDY------------DIVALQEV--- 73 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGA 133 + W S + +R+ N+ I T I + +P+ G Sbjct: 74 ------WCSEDWEYLSSRCENLYPYRRNFNSGIITGPGLCILSKVPIKETFLYRFPINGR 127 Query: 134 KDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQ 186 +F R + V + I +L+ H+ + + + +C Sbjct: 128 PSAFFRGDWMVGKSISVTLLQPHTKGALPIALLNSHMHAPYALTGDAAYSCHRAC----- 182 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRK 214 QA + K + V GD N + Sbjct: 183 QAWDFTKLVRMLKRAGYAVVQVGDLNSR 210 >gi|146414275|ref|XP_001483108.1| hypothetical protein PGUG_05063 [Meyerozyma guilliermondii ATCC 6260] Length = 468 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 65/208 (31%), Gaps = 43/208 (20%) Query: 24 VRLVSWNINTLSEQEGVSL------WKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + +W + +S+ L N+V + DY DIV LQE+ Sbjct: 29 LTYNTWGLKYVSKYRRFRLCAIADRLANAVPGSQDDY------------DIVALQEV--- 73 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGA 133 + W S + +R+ N+ I T I + +P+ G Sbjct: 74 ------WCSEDWEYLSSRCENLYPYRRNFNSGIITGPGLCILSKVPIKETFLYRFPINGR 127 Query: 134 KDSFSRAGNRRAVELLVEI------NGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQ 186 +F R + V + I +L+ H+ + + + +C Sbjct: 128 PSAFFRGDWMVGKSISVTLLQPHTKGALPIALLNSHMHAPYALTGDAAYSCHRAC----- 182 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRK 214 QA + K + V GD N + Sbjct: 183 QAWDFTKLVRMLKRAGYAVVQVGDLNSR 210 >gi|296119006|ref|ZP_06837579.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] gi|295968104|gb|EFG81356.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] Length = 269 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 50/208 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WNIN + R L+ ++ D D++ LQE + Sbjct: 1 MRIATWNIN------------SVRTRGERALNLMDKH----DIDVLCLQETKVADDKFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSF--- 137 ++F + + + + +A V ++ + +P + Sbjct: 45 ELFEDAGYHVVF------------HGLNQWNGVAIVSREEPSEVITGFPEQPGYHNDEDK 92 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 +A RA+ ++ +IW L + + E T L L + Sbjct: 93 EQAPEARALGAVIR--NVEIWSLYV-------PNGREITQRHYDYKLDF-LYALARYAEG 142 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFW 225 KK + ++ GDFN N+D W Sbjct: 143 KKREKL--LLTGDFN----IAPRNEDVW 164 >gi|290960579|ref|YP_003491761.1| hydrolase [Streptomyces scabiei 87.22] gi|260650105|emb|CBG73221.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 371 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 34/262 (12%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAK--------VFPKNTWCIFYSTERLINHSKRDSNND 109 + +DADI+ E+ + + + + + + Sbjct: 127 ARVIAEVDADILLTVEVEDRLTLDRFNSQVLGGAIGHDPYPFNLLVDGNDSR-------G 179 Query: 110 IHTAIAVRKKNVRVLQQSY-PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 I I R V + P G K FSR VE+ +G+ +W+L H KS Sbjct: 180 IDVGILSRFPVTSVRSHIFDPGAGGKPVFSRDCPEFEVEV----SGEPLWILGNHFKSKG 235 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 F + +N + ++ + + +T+ V+AGD N + Sbjct: 236 FGRAADNDRRRR-AQAARVREIYEAALTRSPR----VVVAGDLNDSLASPPVR--LLLDA 288 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS-------EILYN 281 ++++ + R++ +DY + ++ + + Sbjct: 289 GLSEAMTHESYGANPPGTHGTGKRDEQKLDYLLFGPELWERVTNVGVERRGIWAPRTFPS 348 Query: 282 EDDIKSRGKRLSDHCPISIDYD 303 D + S+ + SDH + D D Sbjct: 349 FDTVTSKADQASDHAALFADLD 370 >gi|258621396|ref|ZP_05716430.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|262171177|ref|ZP_06038855.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] gi|258586784|gb|EEW11499.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|261892253|gb|EEY38239.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] Length = 268 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 56/161 (34%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + +G K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDSEEHQK-----RMIMATFADEDGNKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNTERLVVMGDIN 154 >gi|258626823|ref|ZP_05721630.1| exodeoxyribonuclease III [Vibrio mimicus VM603] gi|258580870|gb|EEW05812.1| exodeoxyribonuclease III [Vibrio mimicus VM603] Length = 268 Score = 40.1 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 56/161 (34%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + +G K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDSEEHQK-----RMIMATFADEDGNKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNTERLVVMGDIN 154 >gi|251773491|gb|EES54039.1| Exodeoxyribonuclease III [Leptospirillum ferrodiazotrophum] Length = 259 Score = 40.1 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 48/192 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +R+ +WN+N+L + L + DI+ LQE + A Sbjct: 1 MRVATWNVNSLPVRLPQVL----------------DWIDRKSPDILCLQETKVPDSRFPA 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + F + + + + + + +A+ + G D R Sbjct: 45 EPFRERGYDLLFRGQPT------------YNGVAILSRRPLSDPLRD-FPGEPDPECR-- 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 L+ + + ++++ + LD+ + Y + L + A L D + Sbjct: 90 -------LLAATAGPLRLFNLYVPNGQDLDTPKYRYKLA--WLDRLAALLDD-----ERR 135 Query: 202 LVPFVIA-GDFN 212 PF++ GDFN Sbjct: 136 RHPFLVLTGDFN 147 >gi|193215004|ref|YP_001996203.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] gi|193088481|gb|ACF13756.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] Length = 281 Score = 40.1 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 76/301 (25%), Gaps = 67/301 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-GSYNAVAKV 83 + +WNIN R D L + + DI+FLQE+ + V Sbjct: 25 TVSTWNIN--------------GIRARKD--SLVDWLASNKPDILFLQEIKADIAKIPPV 68 Query: 84 FPK-NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKDSFSR 139 F + + F++ T I V+K L S P A++ Sbjct: 69 FSELPDYDAFWNDST-------FKGGYSGTGILVKKSLKESLGNPIFSIPEFDAENRIVE 121 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ-AQWLKDWITQK 198 A ++ V + + L Q + L Sbjct: 122 AAFKQTVLIGI---------------------YTPRGEKDDHYELKLQMLEQLTLRAQGL 160 Query: 199 KESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPNDSL---IRFPKEK--------DS 243 ++ +I GDFN K + N + P + Sbjct: 161 MQNGADVLICGDFNVAHTEKDVHSSQNKPNATGLRPKERAAIDRLLSAGLIDITRALYPD 220 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + F + + + SDH P+++ D Sbjct: 221 NSELFTWWPYWKGAREKNLGWRIDCFYVSPQLATRTRKVEVDTEEKS--SDHSPVTLVLD 278 Query: 304 F 304 F Sbjct: 279 F 279 >gi|301755468|ref|XP_002913572.1| PREDICTED: deoxyribonuclease gamma-like [Ailuropoda melanoleuca] Length = 304 Score = 40.1 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%) Query: 183 LLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ L D W +++ F+ GDFN +Y+ + + + + Sbjct: 160 TSMKEIDELADVYWDVKRRWKTENFIFMGDFNAGCSYVPKKAWKNIRLRTDPEFVWLIGD 219 Query: 241 KDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297 ++ D V+ Q ++ +S S + + + + L SDH P Sbjct: 220 QEDT---TVKRSTSCAYDRIVLRGQEIISSIVPKSNSTFNFQKAYELTEEEALDVSDHFP 276 Query: 298 ISIDY 302 + Sbjct: 277 VEFKL 281 >gi|290961878|ref|YP_003493060.1| hydrolase [Streptomyces scabiei 87.22] gi|260651404|emb|CBG74526.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 489 Score = 40.1 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 42/239 (17%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+++WN+ G + + K+ AD+V LQE A ++ Sbjct: 222 LRVMTWNL-W---HGGTRVRDHRAKQLE--------VITETGADVVGLQETYG-TAAREL 268 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 W + ++ + + ++ + P +G + AG R Sbjct: 269 ADALGW------------YHHQAGDN----LGIISRHPITARFGDPDVG---FYGAAGVR 309 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDS-LENTYSPSCSLLSQQAQWLKDWIT--QKKE 200 +G ++ V +HL + + L++ + L ++ + Sbjct: 310 VRTG-----SGAEVDVWTVHLDYKPYGPYEAAFDGLEAAELIAHEEVRLAQLRDCLRRID 364 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID 258 VP V+ GDFN ++L D W T+ + +R + + PI Sbjct: 365 GSVPVVLVGDFNSP-SHLDRPDVDWPVTLAAETAGLRDSYREAHPDPVRQPGHTWSPIH 422 >gi|169833966|ref|YP_001694067.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae Hungary19A-6] gi|168996468|gb|ACA37080.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae Hungary19A-6] Length = 333 Score = 40.1 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 80/311 (25%), Gaps = 90/311 (28%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++ ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 ILSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIFP 136 Query: 73 EMG----SYNAVAKV--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ ++ + IF S + + Sbjct: 137 ELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPVTVIVKKSYGFYTEAET 196 Query: 121 VR-------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 VL + + A + + + + I + L Sbjct: 197 FHTTRFGTIVLHSRKQDIPDIIALHTAPPLPGLMEIWKQDLNIIH------------NQL 244 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + Y + +IAGDFN + + K D+ Sbjct: 245 ASKYPKA-------------------------IIAGDFNATMRHGA----LAKISSHRDA 275 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 L P + N+ ID+ ++ +N Y D+ + S Sbjct: 276 LNALPPFERGTWNSQSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNS 322 Query: 294 DHCPISIDYDF 304 DH I + F Sbjct: 323 DHRCIFTEITF 333 >gi|332525591|ref|ZP_08401746.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2] gi|332109156|gb|EGJ10079.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2] Length = 269 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 55/219 (25%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTS-DYTLLRQYAKNLDADIVFL 71 + A+ + +R+ ++NI +GV V R + L ++ DAD+VFL Sbjct: 10 TLMPPATGLEALRVATYNI-----HKGVR----GVGRGKRLEIHNLGLAVESFDADMVFL 60 Query: 72 QEM------GSYNAVAKVFP-----------KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 QE+ S F + + Y T + H + Sbjct: 61 QEVRLFNTRESRRFQRTSFGWPEQGQAEFLAPEGYDVAYRTNAITRHGEH---------- 110 Query: 115 AVRKKNVRVLQQSYPLLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 N + + +G D R R + + V+ G + + H F Sbjct: 111 ----GNALLSRWPIGDIGHHDVSDHRFEQRGLLHVPVQWQGMTVHAVVAH-----FGLVH 161 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + Q L ++I ++AGDFN Sbjct: 162 ASRLR--------QVARLAEFIDATVPPGEMLIVAGDFN 192 >gi|66475540|ref|XP_627586.1| sphingomyelinase C precursor [Cryptosporidium parvum Iowa II] gi|32398810|emb|CAD98520.1| endonuclease/exonuclease/phosphatase, possible [Cryptosporidium parvum] gi|46229031|gb|EAK89880.1| sphingomyelinase C precursor [Cryptosporidium parvum Iowa II] Length = 509 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 33/227 (14%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---- 77 ++ +++N L + + T+ + + ++ADI+ LQE+ Sbjct: 10 DRISFLTFNAGLLEYRICGVKLYQNPPYTSHRLLQIPSALRGINADIIALQEVFDEKHSD 69 Query: 78 ---NAVAKVFPKNTWCIFYSTERLINHSKR-------DSNNDIHTAIAV--RKKNVRVLQ 125 ++ V+P + + + S R + +H + V + + Sbjct: 70 YIIESLQPVYP---YFARETKQSQNQKSMRWQPISVIHNQLALHNGLLVLSKYPILNARF 126 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + + + + + V + + ++ + + +IH+ S N S + L Sbjct: 127 TCFSDVTLIEEWFVSKGMLEVTIQLPGMDKSPLTLFNIHMASG-----AVNPESETIETL 181 Query: 185 -SQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDD 223 +++ + L VI GD N NY + Sbjct: 182 RNKEIEQLLGACDHAIRRGEVPVIIGDLNAAPNCCGSNYNYFIDRGW 228 >gi|15902554|ref|NP_358104.1| hypothetical protein spr0510 [Streptococcus pneumoniae R6] gi|116515991|ref|YP_816010.1| hypothetical protein SPD_0507 [Streptococcus pneumoniae D39] gi|148992308|ref|ZP_01822031.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae SP9-BS68] gi|15458083|gb|AAK99314.1| Hypothetical protein spr0510 [Streptococcus pneumoniae R6] gi|116076567|gb|ABJ54287.1| conserved hypothetical protein [Streptococcus pneumoniae D39] gi|147928934|gb|EDK79946.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae SP9-BS68] Length = 333 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|330874571|gb|EGH08720.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 291 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 47/240 (19%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D+V LQE+ ++ F + +L + + + N + Sbjct: 81 DFDLVALQEVDG-GSMRSGFVNQVEHLA----QLGGFPFWYQQLNRNLGRFAQHSNGVLS 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P R A+ + + V+ +HL Sbjct: 136 RLR-PTRIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGT-------------RTR 181 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q +I + V+ GD N N L + L + ++ Sbjct: 182 TRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEAT 230 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R + +D+ ++ + ++ +SDH P++++ Sbjct: 231 F---PSWRPQRCLDHILLSP--------------TLTLERVQVLAHPISDHLPVAVEIRL 273 >gi|325269449|ref|ZP_08136066.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] gi|324988370|gb|EGC20336.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] Length = 290 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 90/318 (28%), Gaps = 55/318 (17%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQY 60 + ++ L+ C+ S AQ++ + ++NI + EG + + + L + Sbjct: 3 RLTTLILAMLLTCSLS-AQRLYVGTYNIRYDNPDDRKEGNAWAQRCPQ--------LCDF 53 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + QE+ + + + AI RK Sbjct: 54 INFEQPAVFGTQEVLVTQLRDLLQGLEAYAYIGVGRDDGREEGE------YAAIFYRKDL 107 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-------GKKIWVLDIHLKSFCFLDSL 173 +++L L G A + GK+ + + H+ D + Sbjct: 108 LKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDRATGKQFYFFNTHM------DHV 161 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + L Q L P ++ GDFN + D+ + + Sbjct: 162 GTVARRESARLILQRIGL-------LAKAQPTILTGDFN-----VDQTDEIYGIFSRSGI 209 Query: 234 LIRFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 L R R+ ID+ + F I I N Sbjct: 210 LRDCYANARQRMAPTGTWNDFMQDSRSNARIDHVFVS---SDFDIPHYA--IFTNSYWTG 264 Query: 287 SRGKRLSDHCPISIDYDF 304 + +SDH P+ + F Sbjct: 265 KSRRNISDHYPVMVKLSF 282 >gi|218202326|gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group] Length = 1350 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 30/124 (24%) Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC---------- 245 ++ S +P+++ GDFN + + + N+S +R ++ C Sbjct: 364 DIRQSSNLPWLVMGDFNEVLWQYEH----FSKRPRNESQMRAFRDALHSCELHDLGFRGL 419 Query: 246 -----NANKNLRN-KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 N + N K+ +D V D N +++ + SDHCPI Sbjct: 420 PHTYDNKREGWNNVKVRLDRAVADGNWRD----------VFSNAQLSHLVSPCSDHCPIV 469 Query: 300 IDYD 303 + Sbjct: 470 LQLS 473 >gi|182626212|ref|ZP_02953970.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] gi|177908476|gb|EDT71009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] Length = 262 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 12/109 (11%) Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKI 255 + P++I GDFN + D+ + I N++ + K Sbjct: 162 EIYKTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKG 216 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D ++D L + + N D+ K G SDH P+ + + Sbjct: 217 GYDGRIID----YILYSKEYEIKSLNIDNRKINGGYPSDHYPVICELEL 261 >gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1] gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1] Length = 253 Score = 40.1 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 93/310 (30%), Gaps = 88/310 (28%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VSWN+N + VK+ D+ K++DADI +QE Sbjct: 1 MKIVSWNVNGIRA---------CVKKGFMDF------FKDVDADIFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAG 141 S + N + A RK V + PL + Sbjct: 36 ----------SKLQEGQIQLDLENYHQYWNYAERKGYSGTAVFTKQEPLSVSYGIGEDDD 85 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW---LKDWITQK 198 + +E ++L++ S L + W ++ +I + Sbjct: 86 EPEGRCITLEFED--FYLLNV----------YTPNSKRDLSRLEDRLHWEERVRAYIKEL 133 Query: 199 KESLVPFVIAGDFN--------------R-KINYLGNNDDFWKTIDPNDSL----IRFPK 239 + + P + GD N + + T+ + +P+ Sbjct: 134 -DEIKPVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREKMSTLLNEGFVDSFRHLYPE 192 Query: 240 EKDSRCNANKNLRNKIP-----IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + S + + + IDYF++ L D+ SD Sbjct: 193 KDQSYTWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGMHT------DVLG-----SD 241 Query: 295 HCPISIDYDF 304 HCP+ I+ DF Sbjct: 242 HCPVYIEIDF 251 >gi|320592520|gb|EFX04950.1| DNA lyase [Grosmannia clavigera kw1407] Length = 795 Score = 40.1 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 9/63 (14%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + + R V+WN+N + + W N L+ LDADIV QE+ Sbjct: 2 PSVPSRRP-RHVTWNVNGIRNPFKYAPWNNDK--------TLQAMFDRLDADIVCFQEVK 52 Query: 76 SYN 78 + Sbjct: 53 TPK 55 >gi|123442505|ref|YP_001006482.1| exonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089466|emb|CAL12314.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 268 Score = 40.1 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 84/309 (27%), Gaps = 81/309 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR 139 +V ++ + +FY H +A + K +++ +P + Sbjct: 45 EEV-SQHGYHVFY------------HGQKGHYGVALLTKNEPLAIRRGFP------TDEE 85 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + V++ F + + L+ ++ Q+ Sbjct: 86 DAQRRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQL 140 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPK 239 + +I GD N I W N L+ + Sbjct: 141 SADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFR 200 Query: 240 EKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + CN + ID + + I D Sbjct: 201 AANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAARCIATGI-------DYDIRSM 253 Query: 290 KRLSDHCPI 298 ++ SDH P+ Sbjct: 254 EKPSDHAPV 262 >gi|331083964|ref|ZP_08333072.1| hypothetical protein HMPREF0992_01996 [Lachnospiraceae bacterium 6_1_63FAA] gi|330402628|gb|EGG82196.1| hypothetical protein HMPREF0992_01996 [Lachnospiraceae bacterium 6_1_63FAA] Length = 334 Score = 40.1 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q + L + ++ P V+ GDFN G + I + + + Sbjct: 142 QMENLN---KRLEKINTPCVVLGDFN------GREKWMFNNITADKYYLCKTNGDTFNFD 192 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + ID+ V+ K SF E L Sbjct: 193 G-----FSVVIDHAVVKGVKAKVHTSWSFMERLPE 222 >gi|159037346|ref|YP_001536599.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] gi|157916181|gb|ABV97608.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] Length = 265 Score = 40.1 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 81/302 (26%), Gaps = 65/302 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +RL +WN+N K + R L + + D+V LQE + V Sbjct: 1 MRLATWNVN---------SVKARLPR-------LLDWLAGTEPDVVCLQETKCPDGAFPV 44 Query: 84 --FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + + ++ N +A+ R V G D +R Sbjct: 45 AEVGALGYTVASHSDGRWN------------GVAILSRVGLTEVTVGFPGEPGFPDPEAR 92 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 A + + V +++ + D Y + L+D + + Sbjct: 93 A---------LAATCAGLRVWSVYVPNGRTPDDPHYAYKLA------WLGALRDALEVEL 137 Query: 200 ESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRF--------------PKEKDSR 244 P + GDFN D + R P Sbjct: 138 TGGPPLAVCGDFNVAPTDADVWDPALFTGSTHVTPAERVALSALRDLGLADVVPTPMKGP 197 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSDHCPISIDY 302 + + + + F+ + D +GK SDH PI +D Sbjct: 198 -HPFTYWDYRAGMFHQNKGMRIDLVYASAPFTRAVRAAYVDREARKGKGPSDHAPIVVDA 256 Query: 303 DF 304 D Sbjct: 257 DL 258 >gi|188533711|ref|YP_001907508.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] gi|188028753|emb|CAO96615.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] Length = 268 Score = 40.1 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 42/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VS+NIN L + L+ + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLQAIVEQHQPDVIGLQETKVHDDMFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +V + H +A + QQ + + Sbjct: 45 EEVASLGYHVFY-------------HGQKGHYGVA-----MLCKQQPIAVRRGFEGDDED 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 RR + + + I VL+ F + + + L+ ++ Q+++ Sbjct: 87 AQRRIIMADIPTSDGVITVLN-----GYFPQGESRDHPTKFPAKEKFYRDLQSYLEQQQK 141 Query: 201 SLVPFVIAGDFN 212 + VI GD N Sbjct: 142 ADNQVVIMGDMN 153 >gi|218780993|ref|YP_002432311.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] gi|218762377|gb|ACL04843.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] Length = 250 Score = 40.1 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 17/152 (11%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + DI+ +QE + A + + ++ R SN KK+ Sbjct: 34 FRTYKPDILAVQEANDFQAEHLIQRMEDYD--HAGFRKNAPDFWQSNILFFKKPWSLKKH 91 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + P +K S+ R+ + +E GK + +D H D + S Sbjct: 92 RHIFYSDTPDEESKWKDSKWP-RQGTLVQLEKGGKTLACVDTH------YDFKPEVQARS 144 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 LL L+D+ +P ++ GDFN Sbjct: 145 ARLL---LNILEDF-----APGLPTLVMGDFN 168 >gi|149728780|ref|XP_001491101.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase gamma) (Deoxyribonuclease I-like 3) (DNase I homolog protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD) [Equus caballus] Length = 380 Score = 40.1 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 6/108 (5%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ F+ GDFN +Y+ + + + +++ K Sbjct: 177 RRWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDLGFVWLIGDEEDT---TVKSSTKCAY 233 Query: 258 DYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ + ++ +S S + + + + L SDH P+ Sbjct: 234 DRIVLRGREIVSSVVPKSNSVFNFQKSYALTEEEALGVSDHFPVEFKL 281 >gi|87118245|ref|ZP_01074144.1| hypothetical protein MED121_14499 [Marinomonas sp. MED121] gi|86165879|gb|EAQ67145.1| hypothetical protein MED121_14499 [Marinomonas sp. MED121] Length = 349 Score = 40.1 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 29/165 (17%) Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 +V + + V + H+ + D + +Q L D+I S Sbjct: 194 FSVAVHEITEDFSVHVYNTHMNAG--RDEDDYNARR------KQFLQLADFINS-YSSNA 244 Query: 204 PFVIAGDFNRKIN---YLGNNDDFWKTIDPNDSLIRF-------PKEKDSRCNANKNLRN 253 +I GDFN K + + W+ + + + C A+ + Sbjct: 245 TVIIGGDFNNKWSDYPHAVEQQAVWEMFLATTGMRLACQDFIEGTDDSIANCAASSSES- 303 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 DQ AY + +L ++ + LSDH PI Sbjct: 304 --------TDQVAYVNRASAPYQLVLEEYGELDNFT-ELSDHEPI 339 >gi|332522369|ref|ZP_08398621.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus porcinus str. Jelinkova 176] gi|332313633|gb|EGJ26618.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus porcinus str. Jelinkova 176] Length = 275 Score = 40.1 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 101/297 (34%), Gaps = 54/297 (18%) Query: 33 TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--------SYNAVAKVF 84 L+ + N++K+ L ++ D++ LQE+ + ++ + Sbjct: 4 WLTLNTHSWMEANALKK----LFDLAEHILAEKYDVICLQEVNQLIESDLATEDSFYQKI 59 Query: 85 PK------NTWCIFYSTE-RLINHSKRDSNNDIHTAIAVRKKNVRVLQQ-----SYPLLG 132 P + + + + S H + K+ V +L + L+ Sbjct: 60 PGTPSLHKDNFALLLTNYLAKRGQPYYWSWAYNHIGYDIYKEGVVILSKKPMRVRGILVT 119 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 A D RR + E++G+++ + +HL F E +S +L Q Q L Sbjct: 120 AIDDEYDYHTRRVLLAKTEVDGREVALASVHL--SWFGKGFEEEWS----MLEQSLQNLN 173 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID-----PNDSLIRFPKEKDSRCNA 247 +P V+ GDFN + G N ++ ++ S + Sbjct: 174 ----------LPLVVMGDFNNPTDSKGYNMILRSSLGLRDSHKEAEIVFGDHSIVSDIDG 223 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R +D+ M Q S SEI + D SDH +S++ + Sbjct: 224 WEGNRYSFKVDHAFMSQE-----FNISRSEITFEGGDAPVV----SDHYGLSVEASW 271 >gi|148983963|ref|ZP_01817282.1| hypothetical protein CGSSp3BS71_07514 [Streptococcus pneumoniae SP3-BS71] gi|147924110|gb|EDK75222.1| hypothetical protein CGSSp3BS71_07514 [Streptococcus pneumoniae SP3-BS71] gi|301799636|emb|CBW32193.1| putative integral membrane protein (possible nuclease activity) [Streptococcus pneumoniae OXC141] Length = 333 Score = 40.1 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|332880309|ref|ZP_08447987.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681754|gb|EGJ54673.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 336 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 96/334 (28%), Gaps = 76/334 (22%) Query: 22 QKVRLVSWNINTL------SEQEGVSLWKN-----SVKRTTSDYTLLRQYAKNLD----A 66 Q R++ +N+ L S +E + + R L + + Sbjct: 24 QPFRVMFYNVENLFDCRHDSLKEDREFLPDGEKKWTPSRYWRKLDALSKVVAAVGEERLP 83 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH--------SKRDSNNDIHTAIAVRK 118 D+V L E+ N +F T R + I A+ + Sbjct: 84 DLVGLCEVE-----------NDSVLFDLTRRSSLRALGYRYVATHSPDVRGIDVALLYQP 132 Query: 119 KNVRVLQ-QSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENT 176 + R+L+ P+ A+ F R + + E ++G + VL HL S + Sbjct: 133 GSFRLLESHEIPVPSAEAGF--RPTRNVLYVKGEVLSGDTLHVLVCHLPSRLGATRVSRR 190 Query: 177 YSP-SCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDFWKTIDPNDSL 234 + + + A + + + ++ GDFN + + + Sbjct: 191 HRMLAARTVRAVADSV------RTATSDARILWMGDFNADVEDRVFREVVFPYFREPGLS 244 Query: 235 IRFPKEKDSRCNANKNLRNK---IPIDYFVMDQ----NAYKFLIQESFS----------- 276 R + ID+ ++ N+ F + Sbjct: 245 PFCADGVRGS------YRYRGIWETIDHILVSPVLMDNSRPFHTSDGCRAIVAFPFMCER 298 Query: 277 ------EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + SDH P+++D+++ Sbjct: 299 EKTYGGVRPFRTYQGPLYKGGYSDHFPVTLDFEW 332 >gi|315047122|ref|XP_003172936.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] gi|311343322|gb|EFR02525.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] Length = 604 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 14/86 (16%) Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 I D + PN + + E+ IDY + + + ++ Sbjct: 247 HDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPG---NYGSRIDYILCSDDIRPWFVE 303 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPI 298 + E G SDHCP+ Sbjct: 304 SNIQE-----------GLMGSDHCPV 318 >gi|242266576|gb|ACS91139.1| APN2 [Microsporum gypseum] Length = 596 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 14/86 (16%) Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 I D + PN + + E+ IDY + + + ++ Sbjct: 239 HDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPG---NYGSRIDYILCSDDIRPWFVE 295 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPI 298 + E G SDHCP+ Sbjct: 296 SNIQE-----------GLMGSDHCPV 310 >gi|242266571|gb|ACS91135.1| APN2 [Microsporum gypseum] Length = 596 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 14/86 (16%) Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 I D + PN + + E+ IDY + + + ++ Sbjct: 239 HDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPG---NYGSRIDYILCSDDIRPWFVE 295 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPI 298 + E G SDHCP+ Sbjct: 296 SNIQE-----------GLMGSDHCPV 310 >gi|242266565|gb|ACS91130.1| APN2 [Microsporum gypseum] Length = 596 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 14/86 (16%) Query: 213 RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 I D + PN + + E+ IDY + + + ++ Sbjct: 239 HDIEASPVLRDLCREFHPNRTGMYTCWEQRVNARPG---NYGSRIDYILCSDDIRPWFVE 295 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPI 298 + E G SDHCP+ Sbjct: 296 SNIQE-----------GLMGSDHCPV 310 >gi|228961316|ref|ZP_04122933.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798369|gb|EEM45365.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 352 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLAFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDINEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|149010798|ref|ZP_01832169.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae SP19-BS75] gi|147765279|gb|EDK72208.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae SP19-BS75] Length = 333 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 90/305 (29%), Gaps = 78/305 (25%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIFP 136 Query: 73 EMG----SYNAVAKV--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ ++ + IF S IA Sbjct: 137 ELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTDS-------------GIA---PV 180 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 ++++SY ++F R +L ++ +H +P Sbjct: 181 TVIVKKSYDFYTKAETFHT--TRFGTIVLHSRKQDIPDIIALH-------------TAPP 225 Query: 181 CSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 L + + + I + S P +IAGDFN + + K D+L P Sbjct: 226 LPGLMEIWKQDLNIIHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPP 281 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + N+ ID+ ++ +N Y D+ + SDH I Sbjct: 282 FERGTWNSQSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIF 328 Query: 300 IDYDF 304 + F Sbjct: 329 TEITF 333 >gi|149002261|ref|ZP_01827203.1| hypothetical protein CGSSp14BS69_01429 [Streptococcus pneumoniae SP14-BS69] gi|225856288|ref|YP_002737799.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae P1031] gi|237650145|ref|ZP_04524397.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae CCRI 1974] gi|147759576|gb|EDK66567.1| hypothetical protein CGSSp14BS69_01429 [Streptococcus pneumoniae SP14-BS69] gi|225724449|gb|ACO20301.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae P1031] Length = 333 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|30693006|ref|NP_849745.1| IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I); inositol trisphosphate phosphatase/ inositol-polyphosphate 5-phosphatase [Arabidopsis thaliana] gi|67461044|sp|Q84MA2|IP5P1_ARATH RecName: Full=Type I inositol-1,4,5-trisphosphate 5-phosphatase 1; Short=At5PTase1 gi|10086465|gb|AAG12525.1|AC015446_6 Putative inositol polyphosphate 5-phosphatase [Arabidopsis thaliana] gi|332193553|gb|AEE31674.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 [Arabidopsis thaliana] Length = 590 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 24/185 (12%) Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199 GN+ +V + + I L HL S D+ + + + ++ Q+L + + Sbjct: 379 GNKGSVSVSMSIYQTPFCFLCTHLSSG-EKDTDQEKRNDDVREIHRRTQFLPHSLNANEL 437 Query: 200 ----ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIR-FPKEKDSRCNAN 248 + + GD N +IN W+ + D L R K + Sbjct: 438 PRSICNHERIIWLGDLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSE 497 Query: 249 KN----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCP 297 K ID ++ D I++N +K R LSDH P Sbjct: 498 GTLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHRP 557 Query: 298 ISIDY 302 ++ + Sbjct: 558 VTATF 562 >gi|237731238|ref|ZP_04561719.1| exonuclease III [Citrobacter sp. 30_2] gi|226906777|gb|EEH92695.1| exonuclease III [Citrobacter sp. 30_2] Length = 272 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 42/195 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSY 77 A ++ VS+NIN L + L + D++ LQE Sbjct: 2 AATMKFVSFNINGLRARPH----------------QLAAIVEKHQPDVIGLQETKVHDDM 45 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + +V K + +FY ++ H T IAVR+ ++ Sbjct: 46 FPLEEV-AKLGYNVFYHGQK--GHYGVALLTKE-TPIAVRRGFPGDDEE----------- 90 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 RR + + I V++ F + + Q L++++ Sbjct: 91 ---AQRRIIMAEIPSPLGSITVIN-----GYFPQGESRDHETKFPAKAAFYQNLQNYLET 142 Query: 198 KKESLVPFVIAGDFN 212 + + P +I GD N Sbjct: 143 ELKRDNPVLIMGDMN 157 >gi|224133800|ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1| predicted protein [Populus trichocarpa] Length = 366 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ++ ID+F++ + +I + + I+ G SDHCP+S++ Sbjct: 307 GKYRGKRMRIDFFIVSEKLKDRII-----QCEMHGHGIELEGFYGSDHCPVSLELS 357 >gi|168492742|ref|ZP_02716885.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC3059-06] gi|183576990|gb|EDT97518.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC3059-06] Length = 333 Score = 40.1 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|229072559|ref|ZP_04205761.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229082318|ref|ZP_04214781.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228700750|gb|EEL53273.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228710535|gb|EEL62508.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 352 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|224542024|ref|ZP_03682563.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] gi|224525081|gb|EEF94186.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] Length = 267 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 46/207 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--------- 74 ++L++ N ++LSE + + + + N D D++ LQE+ Sbjct: 1 MKLMTLNTHSLSESD-----------EKNKLQTIANFILNHDVDVICLQEVNQSMTAKSV 49 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-----AIAVRKKNVRVLQQS 127 S + ++ + + S ++ + +A+ K V ++ Sbjct: 50 STDSSYVGRDIIKEDNYALGLSRLLGDQYNWNYIPVKVGYDKFDEGVAIFSKYPIVNSEN 109 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 L D +S R ++ + + WV HL + D E Sbjct: 110 TLLTQTND-YSFWKKRNSLGVELVKENTHFWVYTAHL--GWWKDEEE------------- 153 Query: 188 AQWLKDW--ITQKKESLVPFVIAGDFN 212 ++ W + VP +AGDFN Sbjct: 154 -PFINQWHKLKTIATKEVPVYLAGDFN 179 >gi|224282535|ref|ZP_03645857.1| hypothetical protein BbifN4_01790 [Bifidobacterium bifidum NCIMB 41171] Length = 309 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 64/218 (29%), Gaps = 32/218 (14%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 +D + ++ +++ LQE + + K+ + I + +S+ S++ + Sbjct: 97 HADAKAIVDIVRDQRVEVLALQETTNDF-IKKL---DEAGIH----SYLPYSQVSSSDGV 148 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + P+ + S A + ++ + +H + Sbjct: 149 Y-----GNGIWSATELGRPVDD--EVGSSASFMPGGTVTFGGGKAQLRFVSVHTTAPIPG 201 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S L + + + +V GDFN ++ + Sbjct: 202 YWSRWKRS------------LDELASMRSREGSRYVFMGDFNATTDHTPFRNILGNRFSD 249 Query: 231 ND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 S F S ID+ V+D++ Sbjct: 250 AARQSGHGFTFTWPSNKLPLPRF---AGIDHIVLDKDI 284 >gi|206970057|ref|ZP_03231010.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218234375|ref|YP_002369878.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|228955337|ref|ZP_04117345.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229153262|ref|ZP_04281440.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|229181366|ref|ZP_04308695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206734634|gb|EDZ51803.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218162332|gb|ACK62324.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228602102|gb|EEK59594.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228629866|gb|EEK86517.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228804470|gb|EEM51081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 352 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|10444261|gb|AAG17824.1|AF289633_1 inositol polyphosphate 5-phosphatase I [Arabidopsis thaliana] Length = 586 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 24/185 (12%) Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199 GN+ +V + + I L HL S D+ + + + ++ Q+L + + Sbjct: 375 GNKGSVSVSMSIYQTPFCFLCTHLSSG-EKDTDQEKRNDDVREIHRRTQFLPHSLNANEL 433 Query: 200 ----ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIR-FPKEKDSRCNAN 248 + + GD N +IN W+ + D L R K + Sbjct: 434 PRSICNHERIIWLGDLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSE 493 Query: 249 KN----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCP 297 K ID ++ D I++N +K R LSDH P Sbjct: 494 GTLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHRP 553 Query: 298 ISIDY 302 ++ + Sbjct: 554 VTATF 558 >gi|68488901|ref|XP_711695.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] gi|46433016|gb|EAK92473.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] Length = 438 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 90/322 (27%), Gaps = 76/322 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--------DADIVFLQEMG 75 + +W + +S+ LR A L D DIV LQE Sbjct: 23 LTFNTWGLKFISKHRK---------------ERLRAIADALANPKCPDEDYDIVALQE-- 65 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLL 131 ++ + W R +R I + +AV + +P+ Sbjct: 66 -------IWCEEDWQYLDLVCRPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPIN 118 Query: 132 GAKDSFSRAGNRRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 G +F R + V + I +L+ H+ + + +C Sbjct: 119 GRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC---- 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLG--------------------NND 222 QA + K++ + GD N K + Y ND Sbjct: 175 -QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPND 233 Query: 223 DFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILY 280 +++ SL + +DY ++D + + ++ + Sbjct: 234 QIATLSLEDQISLAGVTCNSRLNTWRESRPLWEACRLDYALIDASNITPVSA----QVKF 289 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 + SDH S+D Sbjct: 290 VDKLPPPLSCSYSDHFAYSVDL 311 >gi|50422749|ref|XP_459951.1| DEHA2E14872p [Debaryomyces hansenii CBS767] gi|49655619|emb|CAG88197.1| DEHA2E14872p [Debaryomyces hansenii] Length = 301 Score = 40.1 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 13/121 (10%) Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI-----DPNDSLIRFPK 239 + A + WI Q+ + P ++GDFN ++D ++T+ D N + + Sbjct: 183 QKSADLIAGWI-QQMPNNYPTFLSGDFN-----SISSDVAYQTLQKSLKDSNTAAYQHIN 236 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 S + N+ ID F+ ++ + Y D G R SDH P++ Sbjct: 237 GNLSTYTGFEKNDNQSIID-FIWSPLNTNQENSNTY-ALEYEVLDNMYNGSRFSDHRPVN 294 Query: 300 I 300 + Sbjct: 295 V 295 >gi|111017313|ref|YP_700285.1| exodeoxyribonuclease III [Rhodococcus jostii RHA1] gi|110816843|gb|ABG92127.1| probable exodeoxyribonuclease III [Rhodococcus jostii RHA1] Length = 304 Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 81/290 (27%), Gaps = 64/290 (22%) Query: 66 ADIVFLQEM-GSYNAVAK-VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK----- 118 D+V LQE+ A+ VF + + Y + + +AVR Sbjct: 28 PDVVALQEVRARAEAIPPGVFG--HYHLTYDEGDVAGRNGVAVLTRGAP-VAVRTWSGTA 84 Query: 119 -----KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + + N+ + V++ I V ++L L Sbjct: 85 LMRAPGEMHTDRVELDPEPLARGLGEFANQ-GRYVEVDLAEAPITVASMYLPKGGLPAHL 143 Query: 174 EN------------TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 + Y LS A+ L + ++ GD N I + ++ Sbjct: 144 QKPGRMREAPDGGARYDRKMRFLSAFARQLTRSRRTARARGRELLLMGDLN--IAHTRSD 201 Query: 222 DDFWKTIDPNDS-------------LIRFPKEKDSRCNANKNLRNKI------------- 255 W+ + + R + R + + Sbjct: 202 VRNWRRSNQAEGFLPEEREWFDSILSPRTLVDVVRRQHPGVDGPYSWWSWLGQSFVNDIG 261 Query: 256 -PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + + + D +R+SDH P+ +DYDF Sbjct: 262 WRIDYHLATPDLARAAVTAG-------TDRDPVADRRMSDHAPVVVDYDF 304 >gi|26989609|ref|NP_745034.1| exonuclease III [Pseudomonas putida KT2440] gi|24984490|gb|AAN68498.1|AE016481_14 exodeoxyribonuclease III [Pseudomonas putida KT2440] Length = 270 Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 84/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE KV Sbjct: 1 MKIVCFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + H +A+ + + +D A R Sbjct: 38 ---SDDQFPLADVQALGYHVHYHGQKGHYGVALLSRQPPLSLHKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG I +++ F + + L+ + + + Sbjct: 91 FIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRNDQ 145 Query: 204 PFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLIR 236 P ++ GD N R + + W +D L Sbjct: 146 PVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLYP 205 Query: 237 FPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ S + + + ID + Q + D ++ Sbjct: 206 DVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|18399139|ref|NP_564437.1| IP5PI (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I); inositol trisphosphate phosphatase/ inositol-polyphosphate 5-phosphatase [Arabidopsis thaliana] gi|30102676|gb|AAP21256.1| At1g34120 [Arabidopsis thaliana] gi|110742963|dbj|BAE99376.1| putative inositol polyphosphate 5'-phosphatase At5P1 [Arabidopsis thaliana] gi|332193551|gb|AEE31672.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 [Arabidopsis thaliana] Length = 586 Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 24/185 (12%) Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK- 199 GN+ +V + + I L HL S D+ + + + ++ Q+L + + Sbjct: 375 GNKGSVSVSMSIYQTPFCFLCTHLSSG-EKDTDQEKRNDDVREIHRRTQFLPHSLNANEL 433 Query: 200 ----ESLVPFVIAGDFNRKINYLGNN------DDFWKTIDPNDSLIR-FPKEKDSRCNAN 248 + + GD N +IN W+ + D L R K + Sbjct: 434 PRSICNHERIIWLGDLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSE 493 Query: 249 KN----LRNKIPID--YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-----LSDHCP 297 K ID ++ D I++N +K R LSDH P Sbjct: 494 GTLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHRP 553 Query: 298 ISIDY 302 ++ + Sbjct: 554 VTATF 558 >gi|6320856|ref|NP_010935.1| Isc1p [Saccharomyces cerevisiae S288c] gi|731443|sp|P40015|ISC1_YEAST RecName: Full=Inositol phosphosphingolipids phospholipase C; Short=IPS phospholipase C; Short=IPS-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|603611|gb|AAB64552.1| Yer019wp [Saccharomyces cerevisiae] gi|285811643|tpg|DAA07671.1| TPA: Isc1p [Saccharomyces cerevisiae S288c] Length = 477 Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 34/196 (17%) Query: 34 LSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFY 93 L+ L DY D++ LQE+ W Sbjct: 73 LTPISDELLPNGGDSNENEDY------------DVIALQEIWCVE---------DWKYLA 111 Query: 94 STERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL- 148 S +R ++ I T +A+ + +P+ G + R + Sbjct: 112 SACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGKSIA 171 Query: 149 --LVEINGKKIWVLDIHLKS-FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 ++ + I +++ H+ + + SC QA I +++ Sbjct: 172 ITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSC-----QAWDFSRLIKLYRQAGYAV 226 Query: 206 VIAGDFNRKINYLGNN 221 ++ GD N + L + Sbjct: 227 IVVGDLNSRPGSLPHK 242 >gi|327182593|gb|AEA31040.1| hypothetical protein LAB52_00220 [Lactobacillus amylovorus GRL 1118] Length = 367 Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 60/165 (36%), Gaps = 30/165 (18%) Query: 153 NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 GK++ V++ H+ + D Q + L I + ++ ++ GDFN Sbjct: 219 GGKELIVINSHMSA---YDKGGKMR-------KAQMKILSKVIEAEYKAGNYVIVGGDFN 268 Query: 213 RKIN--YLGNNDDF-----W------KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDY 259 + L + D W K + + +++ + + +++ + ++Y Sbjct: 269 HALGRDMLTHFDHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNY 328 Query: 260 FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F+I ++ + + R +DH P+ + + Sbjct: 329 QTVGDG---FIISKNIKAKATDINT----DYRYADHNPVRLGFSL 366 >gi|229062743|ref|ZP_04200048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228716503|gb|EEL68206.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 352 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 38/164 (23%) Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NGK + ++++HL + D QQ ++LK ++ + E+ ++ GD+ Sbjct: 205 NNGKFVRLVNLHLSA---YDEGGKIR-------KQQVEYLKKYMNKHYENGDYVIMGGDW 254 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKI 255 N+ ++ + +D + P + D K Sbjct: 255 NQLLSNVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVT 314 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F++ N + D+K SDH P+S Sbjct: 315 IIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|27365439|ref|NP_760967.1| exonuclease III [Vibrio vulnificus CMCP6] gi|27361587|gb|AAO10494.1| exodeoxyribonuclease III [Vibrio vulnificus CMCP6] Length = 268 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 96/316 (30%), Gaps = 94/316 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------M 74 +++VS+NIN L + L+ D++ LQE + Sbjct: 1 MKIVSFNINGLRAR----------------LHQLQALIDKHQPDVIGLQEIKVHDEAFPV 44 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGA 133 A+ + +++ ++ H +A+ K+ +Q+ +P Sbjct: 45 EDVEAM-------GYKVYFHGQKA------------HYGVALLCKQEPIEIQKGFPTDND 85 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-QWLK 192 + R + ++ G+K+ VL+ + D++ + +Q + L Sbjct: 86 EHQK-----RMIIGTFLDEKGEKVTVLNGYFPQG---DNIAHETKFP---YKRQFYKDLM 134 Query: 193 DWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDP-----------NDSLIR 236 ++T +++ V+ GD N I N W L Sbjct: 135 GYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDW 194 Query: 237 FPKEKDSRCNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNE 282 ++ + + + + + ID + + + + Sbjct: 195 GLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAQCRES-------DI 247 Query: 283 DDIKSRGKRLSDHCPI 298 D ++ SDH PI Sbjct: 248 DYELRGIEKPSDHAPI 263 >gi|42784261|ref|NP_981508.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42740192|gb|AAS44116.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC 10987] Length = 327 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 105/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 25 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 84 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-------------- 116 LQE+ ++ + F N + S + + + + Sbjct: 85 LQEVD-IKSM-RSFDVNGHEFLKNGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 142 Query: 117 -RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLE 174 + K + P + +R VE + + NGK + ++++HL + D Sbjct: 143 SKYKVQTAERFQLPGMEPWPKRLFDLDRAIVEHKIPVSNGKFVRLVNLHLSA---YDEGG 199 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 200 KIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQLLSNVQLSDPKFVKERPEWLV 252 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 253 ELPKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 303 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 304 NVQGKDLKFEN---SDHNPVS 321 >gi|226292490|gb|EEH47910.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Paracoccidioides brasiliensis Pb18] Length = 1237 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 86/284 (30%), Gaps = 53/284 (18%) Query: 60 YAKNLDAD--IVF--LQEMG--SYNAVAKVFPKNTWCI----------FYSTERLINHSK 103 + L D I QE+ S + P N + + + + Sbjct: 639 HLDRLHEDPAIFAVGFQEIVELSPQQIMSTDPGNRIIWENAVKSTLNDYANRRGVSEYVL 698 Query: 104 RDSNNDIHTA--IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 S + TA I V+ + + ++ + AGN+ + ++ + +I + Sbjct: 699 LRSGQLVGTALLIFVKSELLTDIKAVEGSVKKTGMSGMAGNKGGCAIRLQCSNTRICFVT 758 Query: 162 IHLKSF-CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLG 219 HL + D Y L Q + +I GDFN +I Sbjct: 759 AHLAAGFSNYDERNRDYQTISQGLRFQ--------RNRSIEDHDAIIWLGDFNYRIGLPN 810 Query: 220 NN------DDFWKTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + D +++ ND L FP ++R + D + + A Sbjct: 811 DRVRGLIKDGDLESLYENDQLNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYDTSEKA 870 Query: 267 -------YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ YN +K SDH P+ +D Sbjct: 871 RIPAWCDRVLWKGGNLRQLEYNAASLK-----FSDHRPVHATFD 909 >gi|193212906|ref|YP_001998859.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] gi|193086383|gb|ACF11659.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] Length = 341 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 99/350 (28%), Gaps = 65/350 (18%) Query: 3 RKYVLALVFFLVPCTASVAQKVR----LVSWNINTLSEQEGVSL-------WKNSVKRTT 51 R ++L L+ PC+ ++++ R ++ WN+ L + + S T Sbjct: 5 RIFILLLLLLTTPCSNGMSKEPRKSVVIMWWNVENLFDTKNDKQVDDREFTPGGSRHWTP 64 Query: 52 SDYT----LLRQYAKNLD--------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 + Q + ++ DIV E + VF I ++ ++ Sbjct: 65 KKLLLKQLRIAQVFRAIEQQREYERYPDIVAFAETENRG----VFEGTLQAIDHAQYKID 120 Query: 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV 159 H D I +A S P D R ++V Sbjct: 121 YHESPDPR-GIDIGLA-WNPATLKFTGSKPCRVTLD-----NGRGTRYVIVAGFMASGHP 173 Query: 160 LDI---HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + H S F + + +++ D +T + ++ GDFN N Sbjct: 174 FSVVLNHWPSRSFDAKWSEPKRIAAAKVARHIV---DSLTTRNPMAE-IIVMGDFNDHPN 229 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-----ANKNLRNK--IPIDYFVMDQ----N 265 + D + + C K ID ++ N Sbjct: 230 DRSIRTVLGSSFDRKEVTSSANR-LLYNCWNDTKSPGTYYYRKQWERIDQILVSPALLDN 288 Query: 266 AYKFLIQESFSE------------ILYNEDDIKSRGKRLSDHCPISIDYD 303 + + +SF LY+ SDH P+ + D Sbjct: 289 SKLSIDTKSFRVFSIPEMFSHPGKTLYSTYQRGKFKGGYSDHLPLLLKID 338 >gi|39940404|ref|XP_359739.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15] gi|145010717|gb|EDJ95373.1| hypothetical protein MGG_05038 [Magnaporthe oryzae 70-15] Length = 307 Score = 39.7 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 99/320 (30%), Gaps = 55/320 (17%) Query: 9 LVFFLVPCTASVAQ-KVRLVSWNINTLSE------QEGVSLWKNSVK---RTTSDYTLLR 58 L+F LV A++A +R+V+WNI + + ++ + K R Y L Sbjct: 6 LLFGLVAAEAAMASLPLRVVTWNIRYAASSLEQGEKPWFDIFCWATKSRCRQYKFYDKLN 65 Query: 59 QYAKNL---DADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 Q + ++ +QE+ N + I + + + Sbjct: 66 QIVSSTPNGAPMVIGMQEVLDNQLNDIQNSLGDGWAHIGVGRDDGKKAGEYSPIFYQTSQ 125 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR----AVELLVEINGKKIWVLDIHLKSFCF 169 + V + L P + AG+RR AV + K I + HL Sbjct: 126 LRVLASETKWLS---PTPDSVSFGWGAGSRRIVTTAVFEHIATGEKFIHA-NTHL----- 176 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTI 228 + S ++ + Q + +P + GDFN D +KT+ Sbjct: 177 DNVSAQARSEGIKVVLTRIQA------ARVAFGPLPVSLTGDFN-----SAPYADAFKTL 225 Query: 229 DPNDSLI-----RFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEI 278 + + + + ID+ + +S + Sbjct: 226 ADTGFMKGELYDLATPAQHAGPYTTTYTTFREGAGESRIDFIWLGAAQNY-----PYSVV 280 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 Y D G R+SDH P+ Sbjct: 281 KYEIWDHTVDGMRVSDHRPV 300 >gi|225854118|ref|YP_002735630.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae JJA] gi|225722251|gb|ACO18104.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae JJA] Length = 333 Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|197119100|ref|YP_002139527.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197088460|gb|ACH39731.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] Length = 246 Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 78/260 (30%), Gaps = 51/260 (19%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + + + DIV LQE+ I + E + + A Sbjct: 26 RIAEVIDRCNPDIVALQELD-AGLPRTEMIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNA 84 Query: 116 V--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 + R + + P SF R R A+ VE++G KI VL H Sbjct: 85 ILSRSPVQLIKAGAVPTDPLHPSFER---RGALWAEVELHGVKIQVLATH--------FG 133 Query: 174 ENTYSPSCSLLSQQAQWLK--DWITQKKESLVPFVIAGDFN-------RKINYLGNNDDF 224 N +QA+ + +W+ + P V+ GDFN ++ +D Sbjct: 134 LNRGERV-----RQARAVTGPEWLGHPECLP-PAVLCGDFNALFGSSVYRLLTRQLHD-- 185 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 R P+ + + ID+ + N + + + Sbjct: 186 ----VQRKVKGRLPRGT----WPAQLPFMR--IDHLFVTHNLKVRSVSVPRNPLTRVA-- 233 Query: 285 IKSRGKRLSDHCPISIDYDF 304 SDH P+ + + Sbjct: 234 --------SDHLPLVVTLEL 245 >gi|281348003|gb|EFB23587.1| hypothetical protein PANDA_001388 [Ailuropoda melanoleuca] Length = 259 Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%) Query: 183 LLSQQAQWLKD--WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 ++ L D W +++ F+ GDFN +Y+ + + + + Sbjct: 115 TSMKEIDELADVYWDVKRRWKTENFIFMGDFNAGCSYVPKKAWKNIRLRTDPEFVWLIGD 174 Query: 241 KDSRCNANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCP 297 ++ D V+ Q ++ +S S + + + + L SDH P Sbjct: 175 QEDT---TVKRSTSCAYDRIVLRGQEIISSIVPKSNSTFNFQKAYELTEEEALDVSDHFP 231 Query: 298 ISIDY 302 + Sbjct: 232 VEFKL 236 >gi|229175769|ref|ZP_04303275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228607720|gb|EEK65036.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 337 Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKKMLSFLQNENSDFTL 94 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + T + Sbjct: 95 LQEVD-IKSM-RSFDVNGHEFL---KKGLPDYALSFGKNYDTKWVPVPITSPMGYAEAGL 149 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKK-IWVLDIHLKSFCFLD 171 + K Q + L G + R +R VE + +N K + ++++HL + D Sbjct: 150 STFSKYTVQTAQRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---YD 206 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK+++ + E+ ++ GD+N+ ++ + +D + P Sbjct: 207 EGGKIR-------KQQVEFLKEYMNKHYENGDYVIMGGDWNQLLSNVQLSDPKFVKERPE 259 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 260 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 310 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 311 EIVNVQGKDLKFEN---SDHNPVS 331 >gi|254413797|ref|ZP_05027566.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196179394|gb|EDX74389.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 550 Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 106/332 (31%), Gaps = 78/332 (23%) Query: 23 KVRLVSWNINTL-----SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY 77 + + ++N+ L + E +R T + + + +DADI+ QE+ Sbjct: 227 TLNVGTFNLYNLVLPNVTYYETNKYSPELYQRKK---TWIARQIEQMDADIIGFQELFHE 283 Query: 78 NAVAKVFPK-----NTWCI------------FYSTERLINHSKRDSNNDIHTAIAVRKKN 120 A+ ++ + N I S ++NH I T K Sbjct: 284 EALREILTETPDCANANLITANPTGDKPTVALLSKVPVLNHQ-------IFTEFP-EKAR 335 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + + + PL SFSR +V+L + + + V HLKS + + S Sbjct: 336 LDIEGTAIPL----HSFSRPLL--SVDLALS-DTVECTVFVAHLKSKRPIIPEDADRSDP 388 Query: 181 CSLLSQQAQWLKD-----------WITQKKESLVPFVIAGDFNRK----INYLGNNDDFW 225 QA+ L + + P ++ GD N + + + + W Sbjct: 389 MEKAKGQARALLRRAAEATALRVILMETLQNRKRPVIVIGDLNDSGLAVTSKIISGEPPW 448 Query: 226 KTIDPN------DSLIRFPKEKDSRCNANKNLR------NKIPIDYFVMDQNAYKFLIQE 273 + + D L+ K+ +R + +D+ ++ + + Sbjct: 449 EKLRFAQKQEIWDVLLYSVKDIQARQSYGDFYYTHIYNGYYESLDHIMVSEELVAQ-NPD 507 Query: 274 SFSEILYNE-------DDIKSRGKR---LSDH 295 ++ Y D+ S SDH Sbjct: 508 RIGKVTYVSVYNDHLIDETLSYEDMKKWKSDH 539 >gi|320155825|ref|YP_004188204.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] gi|319931137|gb|ADV86001.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] Length = 268 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 95/316 (30%), Gaps = 94/316 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------M 74 +++VS+NIN L + L+ D++ LQE + Sbjct: 1 MKIVSFNINGLRAR----------------LHQLQALIDKHQPDVIGLQEIKVHDEAFPV 44 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR-KKNVRVLQQSYPLLGA 133 A+ + ++ ++ H +A+ K+ +Q+ +P Sbjct: 45 EDVEAM-------GYKVYLHGQKA------------HYGVALLCKQEPIEIQKGFPTDND 85 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA-QWLK 192 + R + ++ G+K+ VL+ + D++ + +Q + L Sbjct: 86 EHQK-----RMIIGTFLDEKGEKVTVLNGYFPQG---DNIAHETKFP---YKRQFYKDLM 134 Query: 193 DWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDP-----------NDSLIR 236 ++T +++ V+ GD N I N W L Sbjct: 135 GYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSFQPEEREWLQTLLDW 194 Query: 237 FPKEKDSRCNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNE 282 ++ + + + + + ID + + + + Sbjct: 195 GLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAAKCRES-------DI 247 Query: 283 DDIKSRGKRLSDHCPI 298 D ++ SDH PI Sbjct: 248 DYELRGIEKPSDHAPI 263 >gi|83314890|ref|XP_730557.1| AP endonuclease-related [Plasmodium yoelii yoelii str. 17XNL] gi|23490314|gb|EAA22122.1| putative AP endonuclease-related [Plasmodium yoelii yoelii] Length = 554 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 14/90 (15%) Query: 216 NYLGNNDDFWKT---IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 NY ND +K I+ N R P CN ID+F++ +N + Sbjct: 474 NYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRAMR------IDHFIVSKNLLNQI-- 525 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E+ Y+ G SDHCP+ ++ Sbjct: 526 ENVEIHGYSVSHTNFYG---SDHCPVILNM 552 >gi|227538655|ref|ZP_03968704.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241574|gb|EEI91589.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 258 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 100/303 (33%), Gaps = 80/303 (26%) Query: 16 CTASVAQ-KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 C+ Q ++++S+NI+ + + D + + + AD+V LQE Sbjct: 17 CSPVFGQQPLKILSYNIHHGNPPSKPGII---------DLEAIAKVIRTSGADVVGLQEI 67 Query: 74 ---------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 + +A++ + F+S + I+ K + I + + L Sbjct: 68 DVNVGRSEHVDQAKKLAELAGMKYY--FFS--KGIDLEKGEYGTLILSKFPITNTER--L 121 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P+ S A + +GK+I + HL L+ + Sbjct: 122 ELPMPVKSEMRSLGIAKIKI-------PSGKEILFANTHL-------DLKEENRIA---- 163 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF-----PK 239 QA+++ + +++ V+ GD N + ++ + Sbjct: 164 --QAKFI---VNHFQDTKHLVVLVGDLNAQ--------------PQSEPIKILGDFFKRS 204 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 E + + N+ ID+ +++++ + E Y SDH P+ Sbjct: 205 EVPNGFTIPEVNPNRE-IDFIMVNKSKNPKFQNHTVIEESYA-----------SDHRPVY 252 Query: 300 IDY 302 + Sbjct: 253 AEL 255 >gi|241958790|ref|XP_002422114.1| inositol phosphosphingolipids phospholipase C, putative; phospholipase C, putative [Candida dubliniensis CD36] gi|223645459|emb|CAX40116.1| inositol phosphosphingolipids phospholipase C, putative [Candida dubliniensis CD36] Length = 438 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 91/322 (28%), Gaps = 76/322 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL--------DADIVFLQEMG 75 + +W + +S+ LR A L D DIV LQE Sbjct: 23 LTFNTWGLKFISKHRK---------------ERLRAIADALANPKSPDEDYDIVALQE-- 65 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA--IAV--RKKNVRVLQQSYPLL 131 ++ + W R +R I + +AV + +P+ Sbjct: 66 -------IWCEEDWQYLDLVCRPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPIN 118 Query: 132 GAKDSFSRAGNRRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 G +F R + V + I +L+ H+ + + +C Sbjct: 119 GRPSAFFRGDFYVGKSIAVTMFQPHHPDILPIALLNSHMHAPYGSGDASYSTHRAC---- 174 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRK---INYLG--------------------NND 222 QA + K++ + GD N K + Y ND Sbjct: 175 -QAWDFAKLVRMLKKAGYAVIQVGDLNSKPDSLPYKLFTVEGGLTDSWNVLNADNVVPND 233 Query: 223 DFWK-TIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILY 280 +++ SL + +DY ++D + I +++ + Sbjct: 234 QIATLSLEDQISLAGVTCNSRLNTWRESRPLWEACRLDYALIDASN----ITPVAAQVKF 289 Query: 281 NEDDIKSRGKRLSDHCPISIDY 302 + SDH S+D Sbjct: 290 VDKLPPPLSCSYSDHFAYSVDL 311 >gi|167945764|ref|ZP_02532838.1| Endonuclease/exonuclease/phosphatase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 208 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 52/148 (35%), Gaps = 23/148 (15%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D+V LQE+ S + + + + +++ + + N I + + + VL Sbjct: 64 DFDLVGLQEVDSGSLRSGFIDQTEY---LASQADFPYWHKQVNRRIGK---LAQHSNGVL 117 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P A+ R A+ + + + + + + +HL L Sbjct: 118 SRLMPSAIAEHQLPGLPGRGALLIEFQTSEQPLAICILHLALG---------KRARMRQL 168 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN 212 ++++ V+ GDFN Sbjct: 169 --------AYVSEVISHYSHLVLMGDFN 188 >gi|86130797|ref|ZP_01049396.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85818208|gb|EAQ39368.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 328 Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 82/309 (26%), Gaps = 53/309 (17%) Query: 30 NINTL--SEQEGVSLWKNSVKRT---------TSDYTLLRQYAKN-------LDADIVFL 71 N+ L ++ + +L + L + ++ + Sbjct: 23 NLENLFDTKNDPATLDDDFTPGGFKEWNSYKFDKKVKKLAKVISKIGKKETATSPSLLGV 82 Query: 72 QEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPL 130 E+ + + + + I H I + +KK+ V ++ L Sbjct: 83 AEVENKAVLEALIKTSK---LEDEGYAIVHYDSPDERGIDVGLLYKKKDFAVHKSEAITL 139 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL-DSLENTYSPSCSLLSQQAQ 189 + R R + + + G ++ +L H S + + + + Sbjct: 140 YLETEEGDRDFTRDILYVQGNLLGTEVHILVNHWPSRRRGANETSHKRIKAAQKNRELID 199 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 L + +I GDFN + KT N L + + S Sbjct: 200 NLVA-----QNPEARVIIMGDFNDGPHSESIKKHLVKTDFYNPMLYLGTRYEGS-----L 249 Query: 250 NLRNKIPI-DYFVMDQNAYKFLIQE-------------------SFSEILYNEDDIKSRG 289 N + I D + N + + F + K+ Sbjct: 250 NYNYEWFIFDQIIFSNNFVRIYDNDLLYEKSDIYNDFYLTEYDGKFKGNPFRTYAGKNYL 309 Query: 290 KRLSDHCPI 298 SDH P+ Sbjct: 310 GGYSDHFPV 318 >gi|241205438|ref|YP_002976534.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859328|gb|ACS56995.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 369 Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 83/296 (28%), Gaps = 63/296 (21%) Query: 70 FLQEMGSYNAVA--------KVFPKNT---WCIFYSTERLINHS---KRDSNNDIHTAIA 115 LQE+ + A+ ++ + + + R I+ + + ++ + + Sbjct: 75 CLQEIDNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDSRGIDVAVLMREETRDGQKIELR 134 Query: 116 VRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + + L + R +EL + I G+ + +H KS Sbjct: 135 DIRSHAMTTYRDLDLFDEELALTNRIDDKIFKRDCLELDLLIGGRPFSLYVVHFKSMGNP 194 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-----------RKI 215 + + + +A+ ++ I + + F I GD N R Sbjct: 195 RDGLDGRQSTMPIRRAEARAVRGIIEDRFGAEQAGTKSFAICGDMNDYQERVDVIGRRGT 254 Query: 216 NYLGNN-------------DDFWKT-IDPNDSLIRFPKEKDSR------CNANKNLRNKI 255 Y + D F + + + L R+ C + + Sbjct: 255 GYRFEHQNETASALDVFSSDGFAENVVRRREPLDRWTLYHARGPQEQWLCQLDYLWLSPA 314 Query: 256 PIDY-------FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + Y+ + Y SDHCP+ + D Sbjct: 315 LAAHNAGCLPEIIRSGQPYRTVFPPGQEVERYPRTGWDRPKA--SDHCPVVMTLDL 368 >gi|170721574|ref|YP_001749262.1| exonuclease III [Pseudomonas putida W619] gi|169759577|gb|ACA72893.1| exodeoxyribonuclease III [Pseudomonas putida W619] Length = 270 Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 84/313 (26%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE KV Sbjct: 1 MKIVCFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AGN 142 + + + + + H +A + Q L + A Sbjct: 38 ---SDDQFPLADVQALGYHVHYHGQKGHYGVA-----LLSRQAPLSLFKGFATDEEDAQR 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + NG I +++ F + + L+ + + + Sbjct: 90 RFIWGTFADANGTPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFKQD 144 Query: 203 VPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLI 235 P ++ GD N R + + W +D L Sbjct: 145 QPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLH 204 Query: 236 RFPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ S + + + ID + Q+ + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|300772811|ref|ZP_07082681.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761114|gb|EFK57940.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] Length = 269 Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 70/302 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P + K+ ++++NI+ + + + + K + D+V LQE Sbjct: 27 IPEPKTEKSKLTVITYNIHHGAPENSEVVN----------LENIANTIKQKNPDLVALQE 76 Query: 74 ----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + +A++ N + + ++++ + I + + R Sbjct: 77 VDVNVPRSGKVDQAKKLAELLNMNYYF-----SKSLDYNGGEYGVAILSKFPISNT--RR 129 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L+ P+ G K + + A NGK + HL ++ N + Sbjct: 130 LELPMPVAGEKRTVAMATIDLG-------NGKTLEFASTHL-----DLNVPNRTA----- 172 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 QA +L + P +I GD+N +N + +L + Sbjct: 173 ---QATFLN---ELSVQLNKPIMIGGDYN-----AESNSVELTELRKQYTLSCV-----N 216 Query: 244 RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 C + +RN ID+ ++ A + + SDH P+ Y Sbjct: 217 GCPNSFPVRNPTKAIDFVASNKLA--------VQQYSLLSAVALTGSYA-SDHLPVVAIY 267 Query: 303 DF 304 ++ Sbjct: 268 NY 269 >gi|56552297|ref|YP_163136.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|56543871|gb|AAV90025.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 261 Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 90/288 (31%), Gaps = 87/288 (30%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L ++ + DI+ LQE+ S +A + + +A Sbjct: 18 RLIEWLEKFQPDILCLQELKSDDA----------RFPQEEIEKTGYYCLYHGQKAYNGVA 67 Query: 116 V-RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ ++++ S P + EI+ + V ++L + L+S + Sbjct: 68 ILSKEQPKLIRTSLPDDPDPTQSR--------YIEAEIDN--LTVASLYLPNGNPLNSPK 117 Query: 175 NTYSPS--------CSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------------- 212 Y + L QQ + P ++AGD+N Sbjct: 118 YDYKLAWFKAFLAHARSLWQQEK--------------PVILAGDYNVVPSFDIKDIRNAA 163 Query: 213 ----------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 R++ +G D + P++ L F + ++ + Sbjct: 164 ALADNALLAPESLFYWRQLLAMGWTDSL-RVRHPSEPLYSF-WDYQAQSWPRDDGMR--- 218 Query: 257 IDYFVMDQNAYKFLIQESF-SEILYNEDDIKSRGKRLSDHCPISIDYD 303 ID+ ++ + L ++ ++ SDH P+ I+ D Sbjct: 219 IDHILLTPDLADGLTDSGVDRQM--------RGQEKASDHAPVWIEID 258 >gi|295088164|emb|CBK69687.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 316 Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 101/328 (30%), Gaps = 45/328 (13%) Query: 2 IRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNS-VKRTTSDYTLL 57 ++ +L + +V C + + + S+N+ + G S+ N +R Y ++ Sbjct: 3 LKNLLLIALVAIVFCGCQSNYQPTSITVASYNLR--NANGGDSINGNGWGQR----YPVI 56 Query: 58 RQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 Q + D DI QE + + + P + + Sbjct: 57 AQIVQYHDFDIFGTQECFIHQLKDMKEALPSYDYIGVGRDDGKEKGEHSAIFYRTDKFDV 116 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + + + D+ + G + ++H+ + Sbjct: 117 IEKGDFWLSETPDVPSKGWDAVLPRICSWG-HFKCKDTGFEFLFFNLHM-----DHIGKK 170 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNNDDFWKTIDPN 231 S L+ + + L +P ++ GDFN + + Sbjct: 171 ARVESAFLVQDKMKELGK------GKELPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEK 224 Query: 232 DSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEIL--------- 279 + + N ++ ID+ + + ++ +++ I+ Sbjct: 225 AGFRYAINGTFNDFDPNSFTESR--IDHVFVSPSFHVKKYGVLTDTYRSIVGKGEKKQAN 282 Query: 280 --YNEDDIKSRGKR-LSDHCPISIDYDF 304 E DIK+ R SDH P+ ++ +F Sbjct: 283 DCPEEIDIKTYQARTPSDHFPVKVELEF 310 >gi|227538285|ref|ZP_03968334.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241800|gb|EEI91815.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 326 Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 16/127 (12%) Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD------ 242 L +I + + ++ GDFN ++ +N + + + K Sbjct: 201 DQLASFIKEHSKDK-AILLMGDFNAHYSFELDNVRNFIKETRMIDTWVYLENKGIVPHID 259 Query: 243 ---SRCNANKNLRNKIPIDYFVMDQNAYKFLIQE--SFSEILYNEDDIKSRGKRLSDHCP 297 S + ++K ID + +A I E + L+ G LSDHC Sbjct: 260 PIYSAGDILAIRKDKESIDKIMFRNSADLHFIPERYTIENRLFT----DKSGIPLSDHCA 315 Query: 298 ISIDYDF 304 +S+ + + Sbjct: 316 VSLSFSW 322 >gi|182683518|ref|YP_001835265.1| hypothetical protein SPCG_0548 [Streptococcus pneumoniae CGSP14] gi|303253912|ref|ZP_07340033.1| hypothetical protein CGSSpBS455_00456 [Streptococcus pneumoniae BS455] gi|303260077|ref|ZP_07346050.1| hypothetical protein CGSSp9vBS293_01315 [Streptococcus pneumoniae SP-BS293] gi|303261261|ref|ZP_07347209.1| hypothetical protein CGSSp14BS292_07980 [Streptococcus pneumoniae SP14-BS292] gi|303265917|ref|ZP_07351813.1| hypothetical protein CGSSpBS457_00610 [Streptococcus pneumoniae BS457] gi|303268299|ref|ZP_07354096.1| hypothetical protein CGSSpBS458_02224 [Streptococcus pneumoniae BS458] gi|182628852|gb|ACB89800.1| hypothetical protein SPCG_0548 [Streptococcus pneumoniae CGSP14] gi|301801456|emb|CBW34148.1| putative integral membrane protein (possible nuclease activity) [Streptococcus pneumoniae INV200] gi|302599088|gb|EFL66113.1| hypothetical protein CGSSpBS455_00456 [Streptococcus pneumoniae BS455] gi|302637395|gb|EFL67882.1| hypothetical protein CGSSp14BS292_07980 [Streptococcus pneumoniae SP14-BS292] gi|302638772|gb|EFL69234.1| hypothetical protein CGSSpBS293_01315 [Streptococcus pneumoniae SP-BS293] gi|302642137|gb|EFL72487.1| hypothetical protein CGSSpBS458_02224 [Streptococcus pneumoniae BS458] gi|302644501|gb|EFL74752.1| hypothetical protein CGSSpBS457_00610 [Streptococcus pneumoniae BS457] Length = 333 Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 79/311 (25%), Gaps = 90/311 (28%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIFP 136 Query: 73 EMG----SYNAVAKV--------FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 E+ ++ + IF S + + Sbjct: 137 ELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIAPVTVIVKKSYGFYTEAET 196 Query: 121 VR-------VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 VL + + A + + + + I + L Sbjct: 197 FHTTRFGTIVLHSRKQDIPDIIALHTAPPLPGLMEIWKQDLNIIH------------NQL 244 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + Y + +IAGDFN + + K D+ Sbjct: 245 ASKYPKA-------------------------IIAGDFNATMRHGA----LAKISSHRDA 275 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 L P + N+ ID+ ++ +N Y D+ + S Sbjct: 276 LNALPPFERGTWNSQSPKLFNATIDHILLPKNH-------------YYVKDLDIVSFQNS 322 Query: 294 DHCPISIDYDF 304 DH I + F Sbjct: 323 DHRCIFTEITF 333 >gi|290512900|ref|ZP_06552264.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] gi|289774513|gb|EFD82517.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] Length = 301 Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 44/209 (21%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 L+ L +VA ++ VS+NIN L + L + D Sbjct: 18 FLLPSLHYSPCTVAATMKFVSFNINGLRARPH----------------QLAAIVEKHQPD 61 Query: 68 IVFLQEM---GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRV 123 ++ LQE + +V + H +A + K Sbjct: 62 VIGLQETKVHDDMFPLEEVAKLGYNVFY-------------HGQKGHYGVALLTKDTPIA 108 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +++ +P RR + + + V++ F + Sbjct: 109 VRRGFPD------DGEEAQRRIIMAEIPSPFGNVTVIN-----GYFPQGESRDHETKFPA 157 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + Q L++++ + P +I GD N Sbjct: 158 KAAFYQNLQNYLETELNKENPVLIMGDMN 186 >gi|154318997|ref|XP_001558816.1| hypothetical protein BC1G_02450 [Botryotinia fuckeliana B05.10] gi|150856881|gb|EDN32073.1| hypothetical protein BC1G_02450 [Botryotinia fuckeliana B05.10] Length = 1069 Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 102/314 (32%), Gaps = 62/314 (19%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD-ADIV--FLQEMGSYNAVAK 82 +++WN + ++++ D L Q ++ D DI+ QE+ K Sbjct: 711 VMTWN--------AGASTPYHLQQSDQDSRFLPQLLQDSDRPDILVFGFQELVDLE--DK 760 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 N + + + + + T + VR + ++ + GN Sbjct: 761 KTTANDYV----QGEIYHLLHTANLVGLFTCVFVRSPLLPRIKNINAAEIKRGMGGLHGN 816 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES- 201 + A+ L ++ + ++ HL + ++ + +L Q + + + +S Sbjct: 817 KGALILRFTLDDTSMCFINCHLAAG--QTQTKDRNTDISMILESQVLPAERDHSVRIDSF 874 Query: 202 ---LVPFVIA--------GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD-SRCNANK 249 +I GD N +I+ +G D + N+ +++ + N Sbjct: 875 VGGGDGTMILDHEICILNGDLNYRIDTMG-RDTVVNAVKANNLAKLLERDQLLASKRKNP 933 Query: 250 NLRNKI----PI------------DYFVMDQNAYK--------FLIQESFSEILYNEDDI 285 R + PI D + + + ++ Y ++ Sbjct: 934 WFRLRAFHELPITFAPTYKYDVGTDNYDTSEKKRAPAWCDRLLYRGHNRVEQLDYRRHEV 993 Query: 286 KSRGKRLSDHCPIS 299 R+SDH P++ Sbjct: 994 -----RVSDHRPVT 1002 >gi|119120921|ref|NP_001073156.1| deoxyribonuclease-1-like 2 [Monodelphis domestica] gi|82659555|gb|ABB88875.1| deoxyribonuclease 1-like 2 [Monodelphis domestica] Length = 288 Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 33/116 (28%), Gaps = 13/116 (11%) Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANK 249 + W + GDFN Y+ ND + ++ + N Sbjct: 180 VIDKW------GTDDILFLGDFNADCKYVRPNDWAKIRLRTSEIFKWLIPDDTDTTVGNS 233 Query: 250 NLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + D V + K + S + + + L SDH P+ + Sbjct: 234 DCAY----DRIVACGSHLRKCIAPNSAMVNNFQKSFSLDQTAALAISDHFPVEVTL 285 >gi|124087428|ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145474943|ref|XP_001423494.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057240|emb|CAH03224.1| Conserved hypothetical protein with homology to transcriptional regulator [Paramecium tetraurelia] gi|124390554|emb|CAK56096.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 85/280 (30%), Gaps = 39/280 (13%) Query: 47 VKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 R+T L+ + DI LQE+ + + + K + I + + Sbjct: 62 SNRSTKIIEQLK----IFNVDIFCLQEVDNIDFYQERIKKLNYEICFVQRPQRPDGCLIA 117 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 + K + L + G + R + V L + K++ + +IH Sbjct: 118 FKVDK--FKLLKSSEYSLDKMAINYGLPLQYQRQNVFQIVILEHILTKKQLVIGNIHT-- 173 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKESLVPFVIAGDFNR-----KINYLGN 220 F + ++ Q L + +K+ + GD N I Y+ Sbjct: 174 --FWNPNQDDLK------YFQIVQLVQKMEAEKESDDQILIFCGDLNSLPHSNPIQYIQK 225 Query: 221 NDDFWKTIDPNDSLIRFPKEK------DSRCNANKNLRNKIP----------IDYFVMDQ 264 N + I+ + + I+ KE + IDY Sbjct: 226 NKPIVERIEKSSNQIKLQKEIFEHYGPPKLNWQSAYHPFPKFTNYTTDFKGCIDYIFY-H 284 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 NA I E + ++ SDH PI +DF Sbjct: 285 NANVEKILRLPEESVLQQEVALPNRNFPSDHLPILASFDF 324 >gi|242239395|ref|YP_002987576.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] gi|242131452|gb|ACS85754.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] Length = 268 Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 87/314 (27%), Gaps = 79/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAVIEQHQPDVIGLQETKVHDDVFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 V K + +FY ++ H +T +AVR+ +D+ R Sbjct: 45 EDV-AKFGYHVFYHGQK--GHYGVAMLTR-NTPLAVRRGFPT---------DEEDAQRR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +++ + L + + F + ++ Q L+ ++ Sbjct: 91 -------IIMADLETPLGTLTV--INGYFPQGESRDHPVKFPAKTRFYQDLQHYLEHHHN 141 Query: 201 SLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPKE 240 + P +I GD N I W + L+ + Sbjct: 142 AEQPVLIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFLPEEREWMLRLQDWGLVDTFRA 201 Query: 241 KDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ C + ID + Q D + Sbjct: 202 QNPECRDRFSWFDYRSSGFDDNRGLRIDLILASQPLASRCSATGI-------DYAIRSME 254 Query: 291 RLSDHCPISIDYDF 304 + SDH PI ++ F Sbjct: 255 KPSDHAPIWAEFAF 268 >gi|229105686|ref|ZP_04236317.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228677734|gb|EEL31980.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] Length = 352 Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 104/315 (33%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T ++ + + +N ++D LQE+ Sbjct: 56 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFALLQEVD- 114 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKKNVRV 123 ++ + F N S + + ++ K Sbjct: 115 IKSM-RSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSKYTVQ 173 Query: 124 LQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 + + L G + R +R VE + +N K + ++++HL + D Sbjct: 174 TAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---YDEGGKIR--- 227 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQ ++LK+++ + ++ ++ GD+N+ I+ +D + P+ + Sbjct: 228 ----KQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNAQLSDPKFVKERPDWLVELPKDF 283 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D K ID F++ N + D Sbjct: 284 TDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 334 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 335 LKFEN---SDHNPVS 346 >gi|254504315|ref|ZP_05116466.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222440386|gb|EEE47065.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 237 Score = 39.7 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 89/294 (30%), Gaps = 78/294 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NI + + RT + L D++ LQE K Sbjct: 2 LKIGSYNIQ----KSIGVDARRRPDRTL-------KVIGELQCDVIALQEAD------KR 44 Query: 84 FPK-----NTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 F N I T + S AI VR+ + + L + Sbjct: 45 FGPRESTLNRDHILAQTNFRPVPFAVGEHSLGWHGNAILVRQGIEILDHRRIELPTLE-- 102 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + +E+ +KI V +HL + + S L Q Sbjct: 103 -----PRGAVTVDLEVEDQKIRVAAMHL------SLIGHFRKKQISSLMHQL-------- 143 Query: 197 QKKESLVPF---VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + + ++ GD N W+ + IR +++ ++ + Sbjct: 144 ---HEGLDYLPTILIGDLNE-----------WR---DDAKSIRLLEKRYEVTTPGRSFPS 186 Query: 254 KIPI---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +P+ D + +F +Q++ SDH P+ + Sbjct: 187 PLPVGSLDRIITSP---EFTVQKAGVHKSKTARIA-------SDHLPVWAELAL 230 >gi|307325474|ref|ZP_07604676.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306888943|gb|EFN19927.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 286 Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 84/294 (28%), Gaps = 64/294 (21%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++R+ ++NI+ + D + + ++L D++ LQE+ Y + Sbjct: 39 RRLRVATFNIHH-----------GAGPADVLDLERVARVIEDLRVDVIGLQEVDRYWKRS 87 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNN----------DIH-TAIAVRKKNVRVLQQSYPL 130 + W + + H+ + + + TA+ R PL Sbjct: 88 GFVDQPAW---LAERLGMQHAFGANLDLDPEEPGRPRRQYGTAVLSRGPIRSWTNTHLPL 144 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 + + R ++ +++ G + HL+ D + + + Sbjct: 145 VPGHEQ------RGLLQATLDVRGTCVEFAVTHLQ----HDDNKERERQAARI------- 187 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 + S V+ GD N P I Sbjct: 188 ----VELLGSSPEHTVLVGDLN---------------ATPETPEIGILTGALDDVWPRAG 228 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D +D +A S ++ + + SDH P+ D Sbjct: 229 SGDGFTYD--ALDPHARIDFHLAS-RDLGPLTAQVVTADPEASDHLPVVSDLRM 279 >gi|296113045|ref|YP_003626983.1| catabolite repression control protein [Moraxella catarrhalis RH4] gi|295920739|gb|ADG61090.1| catabolite repression control protein [Moraxella catarrhalis RH4] Length = 336 Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 97/316 (30%), Gaps = 77/316 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MG 75 + Q +R+VS N+N L E ++ + DAD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFFE---------------WLAISDADVVCIQESRIT 113 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K PK ++ ++ + +A+ + V D Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAG-----------YAGVAIYSRLPFVSVVDGLGFDLAD 162 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +L + +++ ++L S + + L + LK W Sbjct: 163 SQGRFIC-AQFDLSAQGIDHPVYIASLYLPSGSSGEEAQARKDL---FLEKYRHILKQW- 217 Query: 196 TQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDS 233 ++ ++ GD+N + +L D + + D+ Sbjct: 218 ---RDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWL---DHIYDELGYVDT 271 Query: 234 LIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ D + + + IDY + K + + +Y + Sbjct: 272 FRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR----TLNAWVYKDSWF--- 324 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ IDY Sbjct: 325 ----SDHAPVIIDYQL 336 >gi|253565030|ref|ZP_04842486.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5] gi|251946495|gb|EES86872.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 3_2_5] Length = 344 Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 101/335 (30%), Gaps = 74/335 (22%) Query: 23 KVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--------------A 66 R+V WN + + + + + + R+Y K LD Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNH-RRYKKKLDNVARTLTAIGEWNFP 82 Query: 67 DIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ L E+ + + + + + + I+ A+ ++ Sbjct: 83 ALIGLCEVENDTVMRDLTLYSPLKEAGYRYVMT--------HCSDLRGINVALLYQRDRF 134 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL--KSFCFLDSLENTYS 178 ++L SY L + R + + + + G + ++ HL +S S Sbjct: 135 KLL--SYSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGVRQSEPYRLY 192 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSL-- 234 + L A L I + + + +I GDFN +Y + + + P S Sbjct: 193 AA-QKLKDAADSL---INVRPSAKL--IIMGDFN---DYPTDKSVVQVLQALSPEVSTHH 243 Query: 235 -----IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------------F 269 + K KD + K +D+ ++ Sbjct: 244 DRLYHLLARKAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLL 303 Query: 270 LIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 E + + + + SDH P+ +D++ Sbjct: 304 TKDEKYGGMQPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|42565714|ref|NP_566904.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|53828525|gb|AAU94372.1| At3g48425 [Arabidopsis thaliana] gi|55733769|gb|AAV59281.1| At3g48425 [Arabidopsis thaliana] gi|332644894|gb|AEE78415.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] Length = 364 Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + ++WN + + R +D++ ++ + D D++ +QE+ A Sbjct: 41 EPSKFMTWN------------ANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGG 88 Query: 82 KVFPKN 87 K PKN Sbjct: 89 KGKPKN 94 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ++ IDYF++ + ++ I+ G SDHCP++++ Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMH-----GRGIELEGFHGSDHCPVTLELS 351 >gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana] Length = 686 Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + ++WN + + R +D++ ++ + D D++ +QE+ A Sbjct: 363 EPSKFMTWN------------ANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGG 410 Query: 82 KVFPKN 87 K PKN Sbjct: 411 KGKPKN 416 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ++ IDYF++ + ++ I+ G SDHCP++++ Sbjct: 623 GKYRGKRMRIDYFLVSEQLKDRIVSCKMH-----GRGIELEGFHGSDHCPVTLELS 673 >gi|324329013|gb|ADY24273.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 352 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 104/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVK--------RTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + K +T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKAQTETNLKSMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSM-RSFDVNGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 225 KIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|288959479|ref|YP_003449820.1| exodeoxyribonuclease III [Azospirillum sp. B510] gi|288911787|dbj|BAI73276.1| exodeoxyribonuclease III [Azospirillum sp. B510] Length = 264 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 92/302 (30%), Gaps = 61/302 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WNIN++ + + L + D++ LQE KV Sbjct: 1 MRIATWNINSVRMRLDLLLRLMEEE----------------RPDVICLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + ++ + +A+ + + + + + R Sbjct: 38 VDADFPLAPLAERGYVHA--HIHGMKSYNGVAI------LSRLPFSSHDVQHWCGKQDCR 89 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 A+ L G ++ +++ + D + + + Q + W+ ++ Sbjct: 90 HALARL--PGGIELHC--VYIPAG--GDIPDPAVNDKFAHKLQFLDEMTRWLGTERTPDR 143 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKIPID 258 P V+ GD N I L + K + S + R + S + R P + Sbjct: 144 PMVLVGDLN--IAPLEQDVWSHKELLSVVSHTPVEVERLAAMQASAGWIDAMRRFVPPEE 201 Query: 259 --YFVMDQNAYKFLIQESFSEI---------------LYNEDDIKSRGKRLSDHCPISID 301 Y A + + + D + + SDH P+ +D Sbjct: 202 KLYTWWSYRAKDWAASNRGRRLDHIWVTPPLEGALAGIKVLRDARGWDPKPSDHVPVIVD 261 Query: 302 YD 303 D Sbjct: 262 LD 263 >gi|163745969|ref|ZP_02153328.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus indolifex HEL-45] gi|161380714|gb|EDQ05124.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanibulbus indolifex HEL-45] Length = 333 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 96/334 (28%), Gaps = 54/334 (16%) Query: 24 VRLVSWNINTLSE---------QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 +R+ ++N+ + +G + +V R L LDAD + + E Sbjct: 1 MRVATYNVEWFASLFDDDNRLYDDGGWSSRYNVTRAQQT-AALGLVFTALDADAIMVIEA 59 Query: 75 GSYNAVAKVFPKNTWCIF-YSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 ++ + +S ++ + A+ + GA Sbjct: 60 PNHGRRQSTVAALKYFAARFSLRARAAVMGFSNDTEQEIALLYDPDKLTARHAPQAATGA 119 Query: 134 KDSFSRAGNRRAVE-----LLVEINGKKIWVLD----------IHLKSFCFLDSLENTYS 178 V+ ++ ++ V HLKS + Sbjct: 120 PRFDQTLRIDLDVDATKDAVVFSKPPLELEVTTKAGFAFQVIGAHLKSKAPYGAKSEADV 179 Query: 179 PSCSLLSQ-----QAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 ++ ++ QA WL+ I + P ++ GD N + L + Sbjct: 180 LRIAIANRRKQLAQAIWLRRRIDMHLAADRPVMVMGDLNDGPGLDEFESLFGRSSVEIIL 239 Query: 229 DPNDSLIRFPKE------------KDSRCNANKNLRN-KIPIDYFVMDQNAYK----FLI 271 ++ + P +R R + +DY ++ + I Sbjct: 240 GEGEAALFDPHAKQALSRRLGAAPTSARFWIAPEERFLQALLDYIMVSPQIRARDARWRI 299 Query: 272 QESFSE-ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + ++ SDH P+++D D Sbjct: 300 WHPMDDPACWRNEALRDALLAASDHFPVTLDVDL 333 >gi|308175988|ref|YP_003915394.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] gi|307743451|emb|CBT74423.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] Length = 266 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 98/306 (32%), Gaps = 69/306 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 +++ +WN+N+L R +D + + + D D++ +QE N Sbjct: 1 MKIATWNVNSL--------------RARAD--RVEDWLRRTDVDVLAIQETKCKDDNFPW 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAKDSFSRA 140 ++F N + + + +A+ + + +P + Sbjct: 45 ELFENNDYEVA------------HFGVNQWNGVAIASRVGLENVERTFPGQPEFGKGGKN 92 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + + G +IW L + D +L +++ W+ + + Sbjct: 93 PIQEPRAIAATCGGVRIWSLYVP-NGRALDDEHMGYKLNWLDVLKKESA---GWLEENPQ 148 Query: 201 SLVPFVIAGDFN----------------RKINYLGNNDD----FWKTIDPNDSLIRFPKE 240 + + + GD+N + ++ + ++ + D + + Sbjct: 149 AQI--ALMGDWNIAPKNEDVWDIDFFVENNLTHVSAPERAAFAAFEDLGFTDVVRPHTEG 206 Query: 241 KDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + + LR ID+ + +I S + ++ K +G SDH Sbjct: 207 EYTY-WDYTQLRFPKGEGMRIDFSLTSPALTARVIGASI-----DREERKGKGA--SDHA 258 Query: 297 PISIDY 302 P+ ++ Sbjct: 259 PVIVEL 264 >gi|291241803|ref|XP_002740799.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus kowalevskii] Length = 1257 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 17/187 (9%) Query: 67 DIVFLQEM-------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 D++ QE+ ++ + N + I+ +T + IA R Sbjct: 236 DVIIFQEVFKGGCGYEFGVSLKDLLAANGF-IYSTTTVGDPPEMYFRPYNGGVFIASRWP 294 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + ++ + +D + G A +E K + H F + T Sbjct: 295 ILEESSTTFDPVPTEDIYLTKGVAYAKIEKSTNAGSKVYHIFGTH-----FQFTPSGTDH 349 Query: 179 PSCSLLS-QQAQWLKDWITQKKE-SLVPFVIAGDFN-RKINYLGNNDDFWKTIDPNDSLI 235 + Q+Q + ++T + P ++ GD N I Y + D+ + I I Sbjct: 350 ADYDTIRVLQSQQMAQFMTAQNIPQDEPVILGGDLNVDSIKYSDHRDELFDIIGATVPPI 409 Query: 236 RFPKEKD 242 + Sbjct: 410 IGDLDTT 416 >gi|227891722|ref|ZP_04009527.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus salivarius ATCC 11741] gi|227866525|gb|EEJ73946.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus salivarius ATCC 11741] Length = 375 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 86/278 (30%), Gaps = 60/278 (21%) Query: 62 KNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS--NNDIHTAI----- 114 K ++AD + QE+ V ++ + + N + + N+ H+ Sbjct: 120 KKINADFMLFQEID-------VDSSRSYHVNQVKKMSQNFANYEEIFANNFHSPYLLYPL 172 Query: 115 -----AVRKKNVRV--------LQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVL 160 AV+ + + ++ YP+ + + +R + + NG K+ ++ Sbjct: 173 NDPHGAVQSGLLSLSKYPVEQATRRKYPVSTSFITKFTDLDRCFTVMKIPVTNGHKLILI 232 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI----- 215 + H+ + D +Q + L + + + ++ GDFN Sbjct: 233 NSHMSA---YDKGGKMRV-------KQLKLLNSVMESEYKKGNYVIVGGDFNHTFGRKML 282 Query: 216 ----NYLGNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 + D + + + + C K V+D Sbjct: 283 THFKSQQETPDWVSVLSSKDLAPDIRMVHAKNENTVPTCRGTDIPYQKGKTYTTVIDG-- 340 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 FL+ ++ N + + DH P+ + + Sbjct: 341 --FLVSKNVQATSENINTEFAYA----DHNPVKLSFKL 372 >gi|225860585|ref|YP_002742094.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae Taiwan19F-14] gi|298229188|ref|ZP_06962869.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255846|ref|ZP_06979432.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502377|ref|YP_003724317.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae TCH8431/19A] gi|225727428|gb|ACO23279.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae Taiwan19F-14] gi|298237972|gb|ADI69103.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae TCH8431/19A] gi|327390321|gb|EGE88662.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA04375] Length = 333 Score = 39.7 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNATIDHILLPKNH-------------YYVRDLDIVSFQNSDHRCIFTEITF 333 >gi|148998256|ref|ZP_01825725.1| hypothetical protein CGSSp11BS70_03611 [Streptococcus pneumoniae SP11-BS70] gi|149021544|ref|ZP_01835599.1| hypothetical protein CGSSp23BS72_06749 [Streptococcus pneumoniae SP23-BS72] gi|168482818|ref|ZP_02707770.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC1873-00] gi|168576517|ref|ZP_02722391.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae MLV-016] gi|307067202|ref|YP_003876168.1| hypothetical protein SPAP_0573 [Streptococcus pneumoniae AP200] gi|147755899|gb|EDK62943.1| hypothetical protein CGSSp11BS70_03611 [Streptococcus pneumoniae SP11-BS70] gi|147930240|gb|EDK81225.1| hypothetical protein CGSSp23BS72_06749 [Streptococcus pneumoniae SP23-BS72] gi|172043818|gb|EDT51864.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae CDC1873-00] gi|183577748|gb|EDT98276.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae MLV-016] gi|306408739|gb|ADM84166.1| hypothetical protein SPAP_0573 [Streptococcus pneumoniae AP200] Length = 333 Score = 39.7 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 62/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++ + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSASNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA---PVTVIVKKSY 188 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 189 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 236 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 237 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNS 289 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 290 QSPKLFNTTIDHILLPKNH-------------YYVKDLDIVSFQNSDHRCIFTEITF 333 >gi|87303215|ref|ZP_01086008.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] gi|87282110|gb|EAQ74071.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] Length = 283 Score = 39.7 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 90/311 (28%), Gaps = 86/311 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQE--MGSYN 78 +++ +WN+N++ L Q L+ +++ LQE + Sbjct: 1 MQIATWNVNSVRS-------------------RLEQVVAWLELERPEVLCLQETKVEDAA 41 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ---SYPLLGAKD 135 F + S ++ + +A+ + + L Sbjct: 42 FPVGAFSDLGYSAVISGQKA------------YNGVAILSRLPLEDVRIGFDALLPDEPA 89 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPS---CSLLSQQAQWLK 192 R ++ + + VL++++ + L S + Y + C L+ Sbjct: 90 VALAEQKR-----VISARIEGVRVLNLYVPNGSALRSEKYAYKLAWLAC---------LE 135 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDD------FWKTIDPNDSLIRFPKEKDSRC- 245 ++ + P + GDFN ++ +D + D+L E+ + Sbjct: 136 RYLKVQDADGDPVCMVGDFNIALDDRDIHDPKRLSGGIMASDPERDALRLALDERLADVF 195 Query: 246 -------NANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + ID+ + Q + + + D Sbjct: 196 RLFEPERGHWSWWDYRSGAWDRDSGWRIDHIYLSQELQERATGCLIHKAVRGND------ 249 Query: 290 KRLSDHCPISI 300 + SDH P+ + Sbjct: 250 -KPSDHAPVVV 259 >gi|330833582|ref|YP_004402407.1| DNA nuclease [Streptococcus suis ST3] gi|329307805|gb|AEB82221.1| DNA nuclease [Streptococcus suis ST3] Length = 1039 Score = 39.7 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 91/326 (27%), Gaps = 57/326 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 624 PNDDKLTIASYNIENFSADSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 677 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 678 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 736 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 737 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 796 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ------KKESLVPFVIAGDFNRKINY 217 L S + L P ++ L IT + V+ GDFN Sbjct: 797 LNSKRGDNGLYGKIQPVSFKSEEKRHSLAQIITDFTKAGLTQNPNANIVMLGDFNDYEFT 856 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + ++ + S + N +D ++ N L+ + Sbjct: 857 KTI-----EILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTN----LLDRYAFD 907 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYD 303 +++ R SDH P+ + D Sbjct: 908 MVHVNSAFMEEHGRASDHDPLLVQLD 933 >gi|206976682|ref|ZP_03237587.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217962556|ref|YP_002341128.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|206745168|gb|EDZ56570.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217063640|gb|ACJ77890.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] Length = 352 Score = 39.7 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 90/282 (31%), Gaps = 56/282 (19%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 T + + + +N ++D LQE+ ++ + F N S + + Sbjct: 89 TEVNLKNMLSFLQNENSDFALLQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDT 146 Query: 110 IHTAIAVRKKNVR------------VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-IN 153 + + V + L + + + R VE + N Sbjct: 147 KWVPVPITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNN 206 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 GK + ++++HL + D QQ ++LK+++ + ++ ++ GD+N+ Sbjct: 207 GKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQ 256 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKIPI 257 ++ + +D + P + D K I Sbjct: 257 LVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTII 316 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 D F++ N + D+K SDH P+S Sbjct: 317 DGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|293605431|ref|ZP_06687813.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC 43553] gi|292816159|gb|EFF75258.1| endonuclease/exonuclease/phosphatase [Achromobacter piechaudii ATCC 43553] Length = 255 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 75/246 (30%), Gaps = 41/246 (16%) Query: 66 ADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRK 118 D+VFLQE+ + V + +P + F + +++ + H A+ Sbjct: 44 PDVVFLQEVLGEHQVHAERHQEAWPALSQYEFLADTLWSDYAYGRNAVYPAGHHGNAILS 103 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + +++ + R + + + + +HL Sbjct: 104 RYPIERYENH-DVSVDGHEGRGLLHCVLRM---PGDAPVHAICVHL--GLLERHRGEQLQ 157 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 C L++++ P +IAGDFN ++ N D + + Sbjct: 158 RLCELVAREVPA-----------DEPLLIAGDFN---DWRLNADRLMAGCGTQE-VFTTR 202 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + +R + + +D + + + RLSDH P+ Sbjct: 203 LGRPARTFPARWPLLR--LDRIYVRSVRDWRPVPLASRV-----------WSRLSDHVPL 249 Query: 299 SIDYDF 304 S + Sbjct: 250 SAEIAL 255 >gi|45199199|ref|NP_986228.1| AFR680Wp [Ashbya gossypii ATCC 10895] gi|44985339|gb|AAS54052.1| AFR680Wp [Ashbya gossypii ATCC 10895] Length = 461 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 77/260 (29%), Gaps = 57/260 (21%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSD-YTLLRQYAKNLDA------- 66 S + + L +W + +S+ L + K D + L Y D+ Sbjct: 20 SSIQSTVRFLTLNTWGLKYVSKFRQERLCAIADKLAGYDNFLQLVDYRDVSDSNYTPEED 79 Query: 67 ----DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAV--RK 118 D+V LQE+ + K W + R + I +A+ + Sbjct: 80 ADEYDVVALQEV---------WCKKDWDYIVDRCKGRYPYHRWFLSGIVAGPGLAILSKI 130 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV------EINGKKIWVLDIHLKS--FCFL 170 +P+ G +F R + + N + +++ H+ + Sbjct: 131 PIESTFLYRFPINGRPSAFWRGDWYVGKSVSITLLRPTGPNAAPLCIMNSHMHAPYGLDG 190 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK-----KESLVPFVIAGDFNRK--------INY 217 D +C W + ++S VI GD N + + + Sbjct: 191 DE-AYECHRACQ----------AWDFSRLASVYRKSGYAVVIVGDLNSRPGSLPYKLLTH 239 Query: 218 LGNNDDFWKTIDPNDSLIRF 237 +D W+ ++ L Sbjct: 240 ETGLEDSWEQLNGEQDLQYI 259 >gi|24372731|ref|NP_716773.1| hypothetical protein SO_1148 [Shewanella oneidensis MR-1] gi|24346800|gb|AAN54218.1|AE015559_2 hypothetical protein SO_1148 [Shewanella oneidensis MR-1] Length = 377 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 44/233 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA----KNLDADIVFLQEMGSYNA 79 +R+ + N+ + ++ + + + Q+ DIV QE+ S Sbjct: 19 IRIATINLFNF-IEPPLAFYDFENIYSHGQWQKKCQWFGELLNQYHPDIVGFQEVFSPEP 77 Query: 80 VAKVF---PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL---LGA 133 + ++ + I S + ++ + + + + + + L + Sbjct: 78 LKQLTAQQGLTHFAIVDSATLVSDYIYQSPVVALASRFPILDVHAIEPEAHLVAAMGLSS 137 Query: 134 KDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS------------FCFLDSLENTYSPSC 181 + SFSR R V++ +H KS L + S Sbjct: 138 QFSFSRKVLRATVDI---PQIGACDCYVVHFKSKRPGLALEPHPLGLTLSAPPTLALHSE 194 Query: 182 SLLSQQAQWLKDW-----------------ITQKKESLVPFVIAGDFNRKINY 217 + L + Q L W + +++ P ++ GDFN ++ Sbjct: 195 TKLLTE-QALGRWASTMQRGAEAALLFHAILARRQSRRYPVILMGDFNDSLSM 246 >gi|312881205|ref|ZP_07741003.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] gi|309371097|gb|EFP98551.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 23/159 (14%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPLEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P R + + + NG+K+ VL+ + D++E Sbjct: 67 MLCKKEPISVQKGFPTDNDDHQK-----RMIMVTMEDDNGEKVTVLNGYFPQG---DNIE 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 + +Q + L ++ + ++ GD N Sbjct: 119 HETK---YPYKRQFYKDLMTYLNDHHTNDEQLIVMGDIN 154 >gi|284053675|ref|ZP_06383885.1| exodeoxyribonuclease III [Arthrospira platensis str. Paraca] gi|291570470|dbj|BAI92742.1| exodeoxyribonuclease III [Arthrospira platensis NIES-39] Length = 263 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 92/304 (30%), Gaps = 68/304 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ +WN+N RT D + + + D D++ LQE KV Sbjct: 1 MKIATWNVN--------------SIRTRQD--QVLGWLQGQDIDVLCLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAG 141 S + + + +A+ R ++ P+L A Sbjct: 38 I---DQDFPRSPFEELGYHVYIYGQKAYNGVAIFSRLNIESIIMGFTPILSADKVGDLDD 94 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 +R + +++ I ++++++ + + S + Y Q L+D++ Q Sbjct: 95 QKRVIAGVIDD----ICIINVYIPNGSSVGSDKYEYK------LQWLNRLRDYLQQMLIK 144 Query: 202 LVPFVIAGDFN----------------RKINYLGNNDDF--WKTIDPNDSLIRFPKEKDS 243 I GDFN + + D +F ++ Sbjct: 145 YPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAERQALDAIANLGLADGFRKFTQDGGH 204 Query: 244 RCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 A+ ID+ + Y+ I D + SDH P+ Sbjct: 205 FTWWDYRAASFTRNRGWRIDHHYLSPGLYENAIACYI-------DTEPRTQPKPSDHAPV 257 Query: 299 SIDY 302 ++ Sbjct: 258 ILEI 261 >gi|34540411|ref|NP_904890.1| hypothetical protein PG0605 [Porphyromonas gingivalis W83] gi|34396724|gb|AAQ65789.1| hypothetical protein PG_0605 [Porphyromonas gingivalis W83] Length = 413 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 101/338 (29%), Gaps = 79/338 (23%) Query: 25 RLVSWNINTL-------SEQEGVSLWKNSVKRTTSDY-TLLRQYAKNLDA----D---IV 69 R++++N+ L + + L + ++ T S Y L+Q A + A D +V Sbjct: 93 RVMTYNVENLFDCYDDIGKDDSEFLPEGKLRWTQSRYNRKLKQVASVIKAVGGPDWPALV 152 Query: 70 FLQEMGSYNAVAKVF-----PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 L E+ + + + K ++ + I A+ R + + Sbjct: 153 ALVEVENDTVMNNLLSRTPLGKQSYRYVMTNSP--------DKRGIDVALLYRPELFSLD 204 Query: 125 QQ---SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC 181 + G ++ +R L G + V H S + Y Sbjct: 205 HKEEYRVHFRGERNRRTRNILHAQGRL---AGGDTLDVFVCHFPSRRGGVRQSDAYRHDA 261 Query: 182 SLLSQQAQWLKDWITQKKESLVPFV-IAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 + L + + ++++ PF+ I GD N + +T+ L K Sbjct: 262 ATLLR--TKCNEILSRR---HNPFILIMGDLNSN----PDESPLIETLRAGTVLPEAGKA 312 Query: 241 KD------SRCNANKNLR-------NKIPIDYFVMDQN--------------AYKFLIQE 273 S C ++ +D+ ++ N A ++ Sbjct: 313 GAGELYNLSGCPLSQIPPGTTLYKGKWEQLDHIIVSGNFLKPDSRVSYRTGSAKNVVLPY 372 Query: 274 SFSEILYNEDDIKS--------RGKRLSDHCPISIDYD 303 YN I SDH P++ ++ Sbjct: 373 LVHSAPYNVARIAPNRTYQGMHYKGGYSDHLPVAAEFT 410 >gi|60682549|ref|YP_212693.1| hypothetical protein BF3080 [Bacteroides fragilis NCTC 9343] gi|60493983|emb|CAH08775.1| putative conserved exported protein [Bacteroides fragilis NCTC 9343] Length = 344 Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 101/335 (30%), Gaps = 74/335 (22%) Query: 23 KVRLVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--------------A 66 R+V WN + + + + + + R+Y K LD Sbjct: 24 PFRVVFWNTENFFDTRHDSLKNDMEFLPHSMRHWNH-RRYKKKLDNVARTLTAIGEWNFP 82 Query: 67 DIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 ++ L E+ + + + + + + I+ A+ ++ Sbjct: 83 ALIGLCEVENDTVMRDLTLYSPLKEAGYRYVMT--------HCSDLRGINVALLYQRDRF 134 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELL-VEINGKKIWVLDIHL--KSFCFLDSLENTYS 178 ++L SY L + R + + + + G + ++ HL +S S Sbjct: 135 KLL--SYSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGVRQSEPYRLY 192 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSL-- 234 + L A L I + + + +I GDFN +Y + + + P S Sbjct: 193 AA-QKLKDAADSL---INVRPSTKL--IIMGDFN---DYPTDKSVVQVLQALSPEVSTHH 243 Query: 235 -----IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------------F 269 + K KD + K +D+ ++ Sbjct: 244 DRLYHLLARKAKDRNFGSYKYQGEWGLLDHLIVSGTLLDVSGTLFTEEKKANVACLPFLL 303 Query: 270 LIQESFSEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 E + + + + SDH P+ +D++ Sbjct: 304 TKDEKYGGMQPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|332971475|gb|EGK10427.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. 1501(2011)] Length = 342 Score = 39.7 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 17/157 (10%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYNAVA 81 + + N+ + S + N T Y L + KN +DI QE+ A+ Sbjct: 16 IATSNLLNFAL-PNRSYYANMQPYTDHQYQKKLTGLYELLKNAKSDIYAFQEVWDEKALQ 74 Query: 82 ----KVFPKNTWCIFYSTERLINHSKRDSNNDIHT---AIAVRKKNVR-VLQQSYPLLGA 133 K+ + + + + + T I + K + L + L Sbjct: 75 DLAVKLGFEPSQVLAPVASNDPSSALTAGRGAQDTPALGIISKHKVLEWQLLTDFSDLAV 134 Query: 134 KDS----FSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 D + NR + +E+ G+ I V+ HLKS Sbjct: 135 IDIPDVGLYKRFNRPPLVATIEVYGQPITVITAHLKS 171 >gi|332666113|ref|YP_004448901.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100] gi|332334927|gb|AEE52028.1| exodeoxyribonuclease III Xth [Haliscomenobacter hydrossis DSM 1100] Length = 256 Score = 39.7 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 34/134 (25%) Query: 193 DWITQKKESLVPFVIAGDFN-----RKIN-----------YLGNNDDF--WKTIDPNDSL 234 W + ++ ++ GD+N R I+ + W D+ Sbjct: 133 KWAHELQKERPKLIVLGDYNIAHTERDIHDPRGNKNSSGFLPEEREWLSKWFNSGFTDAF 192 Query: 235 IRFPKEKDS----RCNANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 +K A NK IDY + N L S ++ E Sbjct: 193 RFLNPDKVEYSWWSFRAGARKNNKGWRIDYQSVSDNLRDNLR--SARQMNEAEH------ 244 Query: 290 KRLSDHCPISIDYD 303 SDHCP+ ++ D Sbjct: 245 ---SDHCPVLVELD 255 >gi|328676925|gb|AEB27795.1| Exodeoxyribonuclease III [Francisella cf. novicida Fx1] Length = 262 Score = 39.7 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 83/276 (30%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK- 119 K D D + +QE K + E+ D AV+K Sbjct: 24 FKTQDVDFLCIQE-----------TKAQFHQLEKDEQHFPDGYYYDFKD-----AVKKGY 67 Query: 120 -NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 + + PL K+ + + + I ++L S D + Sbjct: 68 SGTAIYAKKKPLKIIKELGLDWADDEGRYIQFDYENFSI--ASLYLPSGSSGDMRQEYKM 125 Query: 179 PSCSLLSQQAQWLKDW---ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 Q+L+ + + ++ ES F++ GDFN I + + WK+ S + Sbjct: 126 ----------QFLEKYKGILKEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDNLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES D R SDH P++I YDF Sbjct: 234 KVVPES---------DYIYRENWFSDHAPLTISYDF 260 >gi|326511341|dbj|BAJ87684.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 306 Score = 39.7 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ++ IDYFV+ + ++ I+ G SDHCP+S++ Sbjct: 243 GKYRGKRMRIDYFVVSEGLKDRIVSCEMH-----GHGIELEGFYGSDHCPVSLELS 293 >gi|229147624|ref|ZP_04275968.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296505509|ref|YP_003667209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|228635833|gb|EEK92319.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296326561|gb|ADH09489.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 352 Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 102/321 (31%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNDFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|301164025|emb|CBW23581.1| putative conserved exported protein [Bacteroides fragilis 638R] Length = 344 Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 45/209 (21%) Query: 131 LGAKDSFSRAGNRRAVELL----VEINGKKIWVLDIHL--KSFCFLDSLENTYSPSCSLL 184 A + G+R ++L + + G + ++ HL +S S + L Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGVRQSEPYRLYAA-QKL 197 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSL-------I 235 A L I + + + +I GDFN +Y + + + P S + Sbjct: 198 KDAADSL---INVRPSAKL--IIMGDFN---DYPTDKSVVQVLQALSPEVSTHHDRLYHL 249 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK-----FLIQESFSEI------------ 278 K KD + K +D+ ++ F ++ + Sbjct: 250 LARKAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTKEKKANVARLPFLLTKDEKY 309 Query: 279 ----LYNEDDIKSRGKRLSDHCPISIDYD 303 + + SDH P+ +D++ Sbjct: 310 GGMQPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|124265241|ref|YP_001019245.1| hypothetical protein Mpe_A0048 [Methylibium petroleiphilum PM1] gi|124258016|gb|ABM93010.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 256 Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 77/260 (29%), Gaps = 50/260 (19%) Query: 57 LRQYAKNLDADIVFLQEMGSY-----NAVAKVFPKNTWCIFY-STERLINHSKRDSNNDI 110 LR + + AD+VFLQE+ +A + S + + Sbjct: 35 LRDAVRTVGADVVFLQEVQGTHERHTARLANWPAVPHYEFLADSIWPQFAYGRNAVYPHG 94 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIHLKSF 167 H AV K + ++ D RR + L + + + +HL Sbjct: 95 HHGNAVLSKFPILRHENL------DVSISGPERRGLLHCVLQLPGRSANVHAVCVHL--- 145 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RKINYLGNNDDFW 225 + Q L + + ++ + P V+AGDFN R+ + Sbjct: 146 --GLQESHRSR--------QLALLCELVEREVPADAPLVVAGDFNDWRRSAHR-----VL 190 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDD 284 + + +R R + +D + A + + Sbjct: 191 EHRAGLREVFLHSGGTSARTFPA---RFPMLQLDRIYVRNAAV-----HAPMVLP----- 237 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + LSDH P++ + Sbjct: 238 -RRPWSHLSDHAPLAAEISL 256 >gi|326577094|gb|EGE26988.1| catabolite repression control protein [Moraxella catarrhalis O35E] Length = 335 Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 97/316 (30%), Gaps = 77/316 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MG 75 + Q +R+VS N+N L E ++ + +AD+V +QE + Sbjct: 68 QTANQVLRVVSINVNGLRAAEKKGFFE---------------WLAVSNADVVCIQESRIT 112 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K PK ++ ++ + +A+ + V D Sbjct: 113 HEQWTDKFRPKGWHTHLFAAQKAG-----------YAGVAIYSRLPFVSVVDGLGFDLAD 161 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +L + +++ ++L S + + L + LK W Sbjct: 162 SQGRFIC-AQFDLSAQGIDHPVYIASLYLPSGSSGEEAQARKDL---FLEKYRHILKQW- 216 Query: 196 TQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDS 233 ++ ++ GD+N + +L D + + D+ Sbjct: 217 ---RDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWL---DHIYDELGYVDT 270 Query: 234 LIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ D + + + IDY + K + + +Y + Sbjct: 271 FRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR----TLNAWVYKDSWF--- 323 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ IDY Sbjct: 324 ----SDHAPVIIDYQL 335 >gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] Length = 252 Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 82/303 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L D+ + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAV------------VKKDF---AEIFQKLDADFFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAG 141 + + + A RK + + PL + + Sbjct: 36 ----------TKMQEGQLKLDLPGYRQYFNYAERKGYSGTAIFAKDEPLTVSYGIQAPEF 85 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +E + +L + +S + + ++ Q Sbjct: 86 DHEGRAITLEYP-------NFYLVTSYVPNSGAKLKRLDFRMGWD--KAFHAYLNQLDSH 136 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + F + + Sbjct: 137 K-PVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKED 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYFV + + ++ SDHCP Sbjct: 196 IYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFG-----------SDHCP 244 Query: 298 ISI 300 + + Sbjct: 245 VEL 247 >gi|225680794|gb|EEH19078.1| synaptojanin-1 [Paracoccidioides brasiliensis Pb03] Length = 1237 Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 67/212 (31%), Gaps = 35/212 (16%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDS 172 I V+ + + ++ + AGN+ + ++ + +I + HL + D Sbjct: 711 IFVKSELLTDIKAVEGSVKKTGMSGMAGNKGGCAIRLQCSNTRICFVTAHLAAGFSNYDE 770 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNN------DDFW 225 Y L Q + +I GDFN +I + D Sbjct: 771 RNRDYQTISQGLRFQ--------RNRSIEDHDAIIWLGDFNYRIGLPNDRVRGLIKDGDL 822 Query: 226 KTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNA-------YKFLI 271 +++ ND L FP ++R + D + + A Sbjct: 823 ESLYENDQLNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYDTSEKARIPAWCDRVLWK 882 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ YN +K SDH P+ +D Sbjct: 883 GGNLRQLEYNAASLK-----FSDHRPVHATFD 909 >gi|330965675|gb|EGH65935.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 291 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 70/240 (29%), Gaps = 47/240 (19%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D+V LQE+ ++ F + +L + + + + N + Sbjct: 81 DFDLVALQEVDG-GSMRSGFVNQVEHLA----QLGSFPFWYQQLNRNLGRFAQHSNGVLS 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P R A+ + + V+ +HL Sbjct: 136 RLR-PTRIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGT-------------RTR 181 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q +I + V+ GD N N L + L + ++ Sbjct: 182 TRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEAT 230 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R + +D+ ++ + ++ +SDH P++++ Sbjct: 231 F---PSWRPQRCLDHILLSP--------------TLTLERVQVLAHPISDHLPVAVEIRL 273 >gi|115360332|ref|YP_777469.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115285660|gb|ABI91135.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 269 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 62/204 (30%), Gaps = 47/204 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI + R + Q LDAD++ LQE+ Sbjct: 20 PPAAPGGRDLRIATYNIR----GGYGKWHTRAAHR-------IAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYP 129 ++ H + + + R N + + Sbjct: 69 P--------LGGT------HAPDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIR 114 Query: 130 LLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D F + R A++ ++ + I V+ HL L + + Q Sbjct: 115 AARTLDLSFHQREPRGALDADIDSSAGMIRVVATHL-------GLSASERSA------QV 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFN 212 Q L +P ++ GD N Sbjct: 162 QRLLAAFDT---GAMPVILMGDIN 182 >gi|158317046|ref|YP_001509554.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] gi|158112451|gb|ABW14648.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] Length = 297 Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 90/310 (29%), Gaps = 81/310 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG-SYNAVAK 82 +R+ +WNIN K R L ++ D+V LQE S A + Sbjct: 1 MRIATWNIN---------SAKARQPR-------LIEWLDRASPDVVCLQETKLSDEAFLE 44 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRA 140 +F ++ + + + +A+ R V + G RA Sbjct: 45 LFDEDLFR--------RGYRVAHHGDGRWNGVAILSRAGLEDVRRGLPGDPGFPGPEPRA 96 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + G +IW L + + ++ Y + L+D + + Sbjct: 97 -------ISASCGGIRIWSLYV--PNGRTVEDPHYAYKLA------WLAALRDVVAELAP 141 Query: 201 SLVPFVIAGDFNRKINYLGNNDD---FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 P + GDFN I + ++ R + +R + P Sbjct: 142 QG-PVMTLGDFN--IAPTDADVWDIAEFEGATHVTEAERAALGRLHDAGLLDLMRERWP- 197 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------------------------S 293 D+ Y + + ++ + ++ L S Sbjct: 198 -----DETVYTYWD---YRQLCFPKNYGMRIDLTLATADVAARARAVWVDRAARKGTGTS 249 Query: 294 DHCPISIDYD 303 DH P+ +D D Sbjct: 250 DHAPVVVDLD 259 >gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268] gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268] Length = 254 Score = 39.3 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 94/306 (30%), Gaps = 82/306 (26%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 +L+SWN+N L G + ++ K LDAD+ LQE Sbjct: 5 KLISWNVNGLRAVMGKNFMED---------------FKRLDADMFCLQE----------- 38 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAGN 142 + + + AV+K + + PL + Sbjct: 39 ---------TKLQEGQIDLDLPGYFQYWNYAVKKGYSGTAIFTKEEPLSVQYGIGVEEHD 89 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 + + +E + +++ + ++ + + + + +L +I ++ Sbjct: 90 QEGRVITLEY--PEFYLITV------YVPNSQGELKRLPYRMKFEDAFLN-YILTLEKKK 140 Query: 203 VPFVIAGDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR-------CNANKNLR 252 P + GD N +I+ + + ++ +F + DS NK Sbjct: 141 -PVIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEERAKFSRVLDSGYLDSFRHFYPNKEEE 199 Query: 253 NKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 IDYFV+ + K L+ S + SDHCP+ Sbjct: 200 YSWWSYRTKARDRNVGWRIDYFVVSKQLEKKLLSASIHQ-----------EVMGSDHCPV 248 Query: 299 SIDYDF 304 I D Sbjct: 249 EITLDL 254 >gi|330938836|gb|EGH42355.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 73/248 (29%), Gaps = 67/248 (27%) Query: 67 DIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D+V LQE+ +A++ W + R + + SN + Sbjct: 57 DLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLS 109 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + ++ P R A+ + + V+ +HL Sbjct: 110 RLRPTKIEDHPLPGPAG---------RGAILVRFGEGEDALVVVMMHLALGT-------- 152 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++Q +I + V+ GD N N L + L Sbjct: 153 -----RTRTRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGL 196 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ + R + +D+ ++ + ++ + +SDH Sbjct: 197 LAPQIEATF---PSWRPQRCLDHILLSP--------------TLTLERVQVLAQPISDHL 239 Query: 297 PISIDYDF 304 P++++ Sbjct: 240 PVAVEIRL 247 >gi|320007613|gb|ADW02463.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331] Length = 260 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 91/300 (30%), Gaps = 62/300 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ +WN+N+++ + L + ++ D++ +QE + Sbjct: 1 MRIATWNVNSITAR----------------LPRLLAWLESSGTDVLCIQET---KCTLEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP + R + + +AV + + L G + R Sbjct: 42 FPTD-------ALREAGYESAVNATGRWNGVAVLSRVGLTDVVTG-LPGGPEYDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + G ++W +++ + + Y + + L++ + + Sbjct: 94 ---AVSATCGGARVW--SVYVPNGREVAHEHYAYK------LRWLEALREAVAADAAGTL 142 Query: 204 PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------------NANKNL 251 PF + GD+N ++D W + P E+++ K Sbjct: 143 PFAVLGDYN----IAPTDEDVWDPAVFEGATHVTPAEREALAALRGTGLSDVVPRPLKYD 198 Query: 252 RNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYD 303 R DY + I + + S R SDH P+ +D D Sbjct: 199 RPYSYWDYRQLAFPKNRGMRIDLVYGNAPFAAAVKDSYVDREERKGKGASDHAPVVVDLD 258 >gi|257870899|ref|ZP_05650552.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] gi|257805063|gb|EEV33885.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] Length = 270 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 49/210 (23%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW-----CIFYSTE--------- 96 + ++ Q D D++ LQE+ A + P + + + Sbjct: 17 EAKLKVIAQEIAAGDYDLIALQEVNQSIAATTIVPDGLYCPTEAILEIKEDNFALRLVEE 76 Query: 97 -RLINHSKRDSNNDIHTAIAV---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV 146 ++++H S H V + + + D +R Sbjct: 77 LQILDHDYYWSWTYSHVGYDVYHEGNALLSKNPIIAKEYLASETTDVWDHTTRKNLSG-- 134 Query: 147 ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFV 206 L E++GK I VL H + + + Y QQ + +T++ S + Sbjct: 135 --LTEVDGKMIQVLSCHFS---WWNDGKFAYE------WQQTEAF---LTERAAS---LL 177 Query: 207 IAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + GDFN D + N SL Sbjct: 178 LLGDFN------NEADSLGYQLVKNSSLQL 201 >gi|187779536|ref|ZP_02996009.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC 15579] gi|187773161|gb|EDU36963.1| hypothetical protein CLOSPO_03132 [Clostridium sporogenes ATCC 15579] Length = 352 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 94/304 (30%), Gaps = 64/304 (21%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE 96 G +S ++T + + + K + +FLQE+ + + + F N + + Sbjct: 76 DGGKGSRSSSKEKTMENMKEITAFLKKDHSSFIFLQEVDTNS--TRSFRINQYDYLKNNL 133 Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---------- 146 + + S + + V K + V L+ + R Sbjct: 134 KAYSSSMALNYKTPWVPVPVLKPHGTVNAG---LVNLSKYKVNSATRYQYPGKEGWPRQL 190 Query: 147 ----------ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 + +E N K++ +++ HL + Y + QQ +L+++I Sbjct: 191 AELDRCFLESRISLE-NDKELVLINSHLSA----------YDKGGKIRKQQLSFLRNYII 239 Query: 197 QKKESLVPFVIAGDFNRKINYLGN---------NDDFWKTIDPNDS------LIRFPKEK 241 ++ + ++ GD+N I D K + + Sbjct: 240 KEYKKGNYIIVGGDWNHLIPGTDPLIFKTTEKWPDWLQKIPNDFKPKEFKWVADKNVPTT 299 Query: 242 DSRCNA-NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 + K ID F++ N +I + + +DH P+++ Sbjct: 300 RTDATPYKKGENFTAVIDGFLVSDNI--EVISVKAHSMDFKN----------TDHNPVNM 347 Query: 301 DYDF 304 + Sbjct: 348 KFKL 351 >gi|222478473|ref|YP_002564710.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] gi|222451375|gb|ACM55640.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] Length = 280 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 76/259 (29%), Gaps = 49/259 (18%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 D+ QE P + S + + + IAVR V Sbjct: 39 PDVAAFQE---------PLPGQRRDLRERLSEYEFVGRGREADDEGESCPIAVRTDRWEV 89 Query: 124 LQQS------YPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + P + D + R A + + V++ H F + Sbjct: 90 VDDDTFWLSETPSEPSTD-WGADYPRIATWARVRAIDGDAALLVVNTH-----FDHVSAH 143 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKI---------NYLG 219 S LL Q+ + + + +P V+ GDFN +I Sbjct: 144 ARRESARLLCQRLPDVAGPDAGESDETIPVVLVGDFNCTSGSDPHRILVGDDPTAETDTA 203 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 DD + + ++ L + ID+ ++ + E+F+ + Sbjct: 204 PIDDSGIALRDAATAADLRHGPETSLTDFARLIDGRRIDHALVSP----EVGAEAFATLT 259 Query: 280 YNEDDIKSRGKRLSDHCPI 298 D RG+ SDH P+ Sbjct: 260 ----DRDDRGRYPSDHLPV 274 >gi|326798886|ref|YP_004316705.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549650|gb|ADZ78035.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 378 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 106/318 (33%), Gaps = 79/318 (24%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 + +R++++N+ L +E ++ +T + T L ++ DIV +QE Sbjct: 108 PDSSSIRVLTYNV-HLFRKED----QDVRPKTKTAVTEL---ILSVSPDIVCMQEFYTRK 159 Query: 75 ----GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 S +A + + F+ ++ + I + ++ S P Sbjct: 160 KGKYNSRQNMAPALGLS-YSYFH---PVVENEYEAYGLIILSRYPIKNAG------SIPN 209 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL----------------KSFCFLDSLE 174 K + +R A+ + NG+ V +IHL KS F + Sbjct: 210 YQGKRTLNR-----AIYADIVKNGRAFRVYNIHLQSIGFQPQDYAFVKDVKSRSFENDNV 264 Query: 175 NTYSPSCSLLS-------QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKT 227 + S L +QA+ +K+ I + ++ P +I GDFN + Sbjct: 265 ASTKRIGSRLKHAFFERSEQAKRIKEEINRCRK---PVIITGDFNDTPLSFAVH------ 315 Query: 228 IDPNDSLIRFPKEKDSRCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + L ++K + N IDY + + + + Sbjct: 316 -TVSSDLNNSFEKKGAGWGITYNGEFPNFQIDYILSSK--------------TFEVKHYQ 360 Query: 287 SRGKRLSDHCPISIDYDF 304 K+LSDH + D Sbjct: 361 ILKKKLSDHYAVWSDLSL 378 >gi|254788112|ref|YP_003075541.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] gi|237685110|gb|ACR12374.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] Length = 250 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 42/254 (16%) Query: 57 LRQYAKNLDADIVFLQEM--GSYNAVAK---VFPKNTWCIFYSTERLINHS--KRDSNND 109 LR+ + +D D+VFLQE+ + ++P+ + F + + H+ + Sbjct: 29 LREALREIDPDVVFLQEVLGEHRQFATRYTDLWPEQSQYEFLADQVWSAHAYGRNAVYPH 88 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 H A+ + ++ + S S R + + + +K+ + +HL Sbjct: 89 GHHGNALLSRFPIDRWHNHDI-----SLSGIEKRGLLYCHLNLGEQKLHAICVHL----- 138 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 SL ++ Q + L + P V+AGDFN ++ ++ Sbjct: 139 --SLRESHR------QIQLKRLSKLVNSLPA-DEPVVVAGDFN---DWRLKAENLLFNES 186 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + K +R + +D + N+ + E +S Sbjct: 187 RLVDAYTGHQGKPARSFPVAMPLLR--LDRIYLRCNSRYEI-----------ERLHRSPW 233 Query: 290 KRLSDHCPISIDYD 303 R+SDH P+ ++ D Sbjct: 234 SRISDHKPLMVELD 247 >gi|125624386|ref|YP_001032869.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493194|emb|CAL98159.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071173|gb|ADJ60573.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 352 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 35/169 (20%) Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 L ++ + KK + + HL +F ++ QQ L D + K + +VI Sbjct: 205 LPIKNSDKKFVIFNTHLSAFITDQKIQ----------KQQLLTLFDAMK-KYVNKGDYVI 253 Query: 208 AG-DFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIP------- 256 G D+N + + + W P ++L R ++ + + Sbjct: 254 CGADYNHALAGKAHPELTWMKEFPTENLTKGMRVVAPTNAPTVRSLDFAYHQKNPKNTFG 313 Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID F++ N I + SDH P+ +D+ Sbjct: 314 IIDGFIVSNNIKDLKI------------QTIDNQFKSSDHQPVLMDFSL 350 >gi|57101132|ref|XP_533780.1| PREDICTED: similar to Deoxyribonuclease gamma precursor (DNase gamma) (Deoxyribonuclease I-like 3) (DNase I homolog protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD) [Canis familiaris] Length = 304 Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 6/108 (5%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ F+ GDFN +Y+ + + + +++ + Sbjct: 177 RRWKAENFIFMGDFNAGCSYVPKKAWKIIRLRTDPGFVWLIGDQEDTTVKSSTH---CAY 233 Query: 258 DYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ + ++ S S + + + + + L SDH P+ Sbjct: 234 DRIVLRGPEIIRSVVPRSNSTFDFQKAFLLTEEEALNVSDHFPVEFKL 281 >gi|326573473|gb|EGE23441.1| catabolite repression control protein [Moraxella catarrhalis 101P30B1] Length = 336 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 97/316 (30%), Gaps = 77/316 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MG 75 + Q +R+VS N+N L E ++ + +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFFE---------------WLAVSNADVVCIQESRIT 113 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K PK ++ ++ + +A+ + V D Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAG-----------YAGVAIYSRLPFVSVVDGLGFDLAD 162 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +L + +++ ++L S + + L + LK W Sbjct: 163 SQGRFIC-AQFDLSAQGIDHPVYIASLYLPSGSSGEEAQARKDL---FLEKYRHILKQW- 217 Query: 196 TQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDS 233 ++ ++ GD+N + +L D + + D+ Sbjct: 218 ---RDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWL---DHIYDELGYVDT 271 Query: 234 LIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ D + + + IDY + K + + +Y + Sbjct: 272 FRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR----TLNAWVYKDSWF--- 324 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ IDY Sbjct: 325 ----SDHAPVIIDYQL 336 >gi|304395763|ref|ZP_07377646.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] gi|304357057|gb|EFM21421.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] Length = 253 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 78/268 (29%), Gaps = 67/268 (25%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS-NNDIHTAIA 115 LR + +AD+VFLQE+ +A+ + E + + + I A Sbjct: 33 LRDAVRATEADVVFLQEVMGTHAIH----------ALNHEAWPDSPHYEFLADTIWNDFA 82 Query: 116 V---------RKKNVRVLQQSYPLLGAKDSFSRAGNRRAV---ELLVEINGKKIWVLDIH 163 N + + +D R + ++ + + V+ +H Sbjct: 83 YGRNAVYPEGHHGNAVLSRFPITEYENRDISVAGSENRGMLHCQIALPEPHGTLHVICVH 142 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 L C +++ P V+AGDFN D Sbjct: 143 L--GLKEAHRHAQMKKICEMVNSLPP------------DAPVVVAGDFN---------DW 179 Query: 224 F--WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI---DYFVMDQN--AYKFLIQESFS 276 +I + ++ + + + PI D + ++ + + Sbjct: 180 QRRANSILKQGAGLKEVFSMKTG-RPARTFPARFPILRLDRIYVRNATVSHPWALP---- 234 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + LSDH P++++ Sbjct: 235 ---------RKPWSHLSDHAPLAVEIHL 253 >gi|295672866|ref|XP_002796979.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Paracoccidioides brasiliensis Pb01] gi|226282351|gb|EEH37917.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Paracoccidioides brasiliensis Pb01] Length = 1237 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 35/212 (16%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF-CFLDS 172 I V+ + + ++ + AGN+ + ++ + +I + HL + D Sbjct: 711 IFVKSELLTDIKAVEGSVKKTGMSGIAGNKGGCAIRLQCSNTRICFVTAHLAAGFSNYDE 770 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNN------DDFW 225 Y L Q + +I GDFN +I + D Sbjct: 771 RNRDYQTISQGLRFQ--------RNRSIEDHDAIIWLGDFNYRIGLPNDRVRGLIKDGDL 822 Query: 226 KTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNA-------YKFLI 271 +T+ ND L FP ++R + D + + A Sbjct: 823 ETLYENDQLNLQMVAGLTFPFYSEARITFPPTYKYDNGTDLYDTSEKARIPAWCDRVLWK 882 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + ++ YN +K SDH P+ +D Sbjct: 883 GGNLRQLEYNAASLK-----FSDHRPVYATFD 909 >gi|148379451|ref|YP_001253992.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 3502] gi|153934303|ref|YP_001383830.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|153935156|ref|YP_001387380.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] gi|148288935|emb|CAL83022.1| putative exodeoxyribonuclease [Clostridium botulinum A str. ATCC 3502] gi|152930347|gb|ABS35847.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|152931070|gb|ABS36569.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] Length = 253 Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 83/303 (27%), Gaps = 75/303 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ SWN+N L + + + DI+ +QE Sbjct: 1 MRIYSWNVNGLRAVAKKNFIE---------------WIGEESPDILCIQETK-------- 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLGAKDSFSRAGN 142 +L ++ K + + AV+K V + K S Sbjct: 38 ---------LQENQLEDNIKNIDGYYSYFSFAVKKGYSGVATYTKVKPISVKHSIGIEKF 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +L+ K +L+I + + + L + L ++ + + Sbjct: 89 DSEGRILI-TGFKDFTLLNI------YFPNGQRDEERLQYKLDF-YEALFNYCDELVKEG 140 Query: 203 VPFVIAGDFN--RKI--------------NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 VI GD+N D K I+ + D Sbjct: 141 KKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIERDWLDKIIERGYTDTFRNMNPDKIKY 200 Query: 247 ANKNLRNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 + + R K IDY + N + +Y SDHCP+ Sbjct: 201 SWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTEILNEVYG-----------SDHCPVM 249 Query: 300 IDY 302 ++ Sbjct: 250 LEL 252 >gi|307129015|ref|YP_003881031.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] gi|306526544|gb|ADM96474.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] Length = 380 Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 40/270 (14%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVR 117 K L+ADI+ E+ + + + + + DS ND I A R Sbjct: 122 IKALNADILCAVEVENMAVLR-----DFNQQILADRAFAQYVMIDSPNDPRGIDVACLTR 176 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-GKKIWVLDIHLKSFCFLDSLENT 176 R+ Q + +SF +R +E+ +++ + + VL H KS ++ Sbjct: 177 H---RITQLRTHIFDVSESFKPLFSRDCLEVTIDVGLPQPVHVLCNHFKS--QNGRNDDE 231 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-------RKINYLGNNDDFWKTID 229 + QA+ + + + V+ GD N + L + D ID Sbjct: 232 RERAAKRRRAQAERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHSLAPLFSVPDLHPAID 291 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK----------------FLIQE 273 P+ + K +DY + ++ + + Sbjct: 292 PSLP---ETARYTYYFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAK 348 Query: 274 SFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +E + + S SDH + ++ D Sbjct: 349 EGAEPVTPFPTVTSWDTAASDHAAVWVELD 378 >gi|260779121|ref|ZP_05888013.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] gi|260605285|gb|EEX31580.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 23/159 (14%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPIEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P R + + NG+K+ VL+ + D++ Sbjct: 67 MLCKKEPLSVQKGFPTDNEDHQK-----RMIMATFEDDNGEKVTVLNGYFPQG---DNIS 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 + +Q + L ++ + ++ GD N Sbjct: 119 HETK---YPYKRQFYKDLMTYLNDHHNNDEQLIVMGDIN 154 >gi|170724257|ref|YP_001751945.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] gi|169762260|gb|ACA75576.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] Length = 284 Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 75/250 (30%), Gaps = 67/250 (26%) Query: 65 DADIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 D D+V LQE+ +A++ W + R + H + SN Sbjct: 79 DFDLVALQEVDGGSLRSGYVNQVEHLAQLGGFPYW--YQQLNRNLGHFAQHSN------- 129 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 VL + P L R A+ + + V+ +HL Sbjct: 130 -------GVLSRLKPHLLEDHPLPGPSGRGAILVRFGEGEDALIVVMMHLALGA------ 176 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 ++Q +I + V+ GD N N L ++ + + Sbjct: 177 -------RTRARQL----AYIRELIGGYRHQVLMGDMNTHANDLLDHSPL-RDLGLIAPQ 224 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + R + +D+ ++ + + ++ + +SD Sbjct: 225 VEAT---------FPSWRPQRCLDHILLSPS--------------LTLERVEVLAQPISD 261 Query: 295 HCPISIDYDF 304 H P++++ Sbjct: 262 HLPVAVEIRL 271 >gi|187729939|ref|YP_001853833.1| endonuclease/exonuclease/phosphatase [Vibrio tapetis] gi|182894498|gb|ACB99663.1| putative exported nuclease [Vibrio tapetis] Length = 287 Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 100/329 (30%), Gaps = 73/329 (22%) Query: 2 IRKYVLALVFFLVPCTASV----------AQKVRLVSWNINTLSEQEGVSLWKNSVKRTT 51 + + F ++ + +R+ S+NI ++ + G + Sbjct: 3 LTSIAAVIGFIVLSSSTLAFDRLMDGPADTNSIRVGSYNI--MASRMGST---------- 50 Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINH--------S 102 + + + ++ DI+ LQE+ + + K F K E + N Sbjct: 51 ---DAIVEAIRKMNVDIIGLQEVDNMTGRSGKNFSKEGSNPVSQAEYIANKLGMNYYFCK 107 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 D + + AV K L + L K + RA AVE+ V + ++ Sbjct: 108 AIDHDGGEY-GTAVLSKYDLKLNKRMELPNIKGAEQRAAC--AVEVDVPNYPAPVMLVTT 164 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLG 219 HL F +Q + L+ + + +I GD N + YL Sbjct: 165 HLD---FTTQPLRA---------EQVRTLQTKFSSWQFKNALPIIVGDLNLPPQSTEYLD 212 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 F + D +++ + IDY + + + Sbjct: 213 LTAWF----NDTDKELKYTA---------PSWNPDRKIDYILTSNAQKWDIK----EVYI 255 Query: 280 YNEDDIKSRGKRL----SDHCPISIDYDF 304 D + + SDH P+ ++ Sbjct: 256 PKPSDRATPESKPYASVSDHLPLLVEMKL 284 >gi|323497693|ref|ZP_08102709.1| exonuclease III [Vibrio sinaloensis DSM 21326] gi|323317276|gb|EGA70271.1| exonuclease III [Vibrio sinaloensis DSM 21326] Length = 268 Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 23/159 (14%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPIEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P R + + + NG+K+ +L+ + D++ Sbjct: 67 MLCKKEPISVQKGFPTDNEDHQK-----RMIMVTVEDDNGEKVTILNGYFPQG---DNIS 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 + +Q + L ++ + V+ GD N Sbjct: 119 HETK---YPYKRQFYKDLMTYLNDHHSNDEQLVVMGDIN 154 >gi|228988325|ref|ZP_04148418.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771390|gb|EEM19863.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 352 Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 91/282 (32%), Gaps = 56/282 (19%) Query: 50 TTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND 109 T + + + +N ++D LQE+ ++ + F N S + + Sbjct: 89 TEVNLKNMLSFLQNENSDFALLQEVD-IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDT 146 Query: 110 IHTAIAVRKKNVRV-------------LQQSYPLLGAKDSFSR--AGNRRAVELLVE-IN 153 + + + + L G + R +R VE + N Sbjct: 147 KWVPVPITNPMGYAEAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEYTIPVNN 206 Query: 154 GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR 213 GK + ++++HL + D QQ ++LK+++ + ++ ++ GD+N+ Sbjct: 207 GKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQ 256 Query: 214 KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKIPI 257 ++ + +D + P + D K I Sbjct: 257 LVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTII 316 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 D F++ N + D+K SDH P+S Sbjct: 317 DGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|46115046|ref|XP_383541.1| hypothetical protein FG03365.1 [Gibberella zeae PH-1] Length = 285 Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 90/307 (29%), Gaps = 38/307 (12%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 + +++ + C K +++N+ L E + K + L+ Sbjct: 9 QLLVSTLALSSLCLGQKTGKFNFLTYNVAGLPEIINGNDVPGDKKTNS---NLIGTAFAT 65 Query: 64 LDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 DIV +QE N Y+T+ + + Sbjct: 66 QGFDIVHMQE-----------DFNYHAYIYATDNHPQRTPTSGGVPFGDGL---NTVANY 111 Query: 124 LQQSYPLLGAKDSFSRAG----NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 ++ +G + + + I G ++ + ++H + D + Sbjct: 112 PWSTFSRKKWNKCNLNSGDCLTPKGFSFMRMAIGGVEVDLYNLHADAG--SDQGDVDARS 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 + + +I + +I GD N + G + K D S Sbjct: 170 A------GIDQVLAYINS-NSNGRAVIIGGDTNDRWTNAGRS--LNKLTDAGFSDAWVQL 220 Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL--YNEDDIKSRGKRLSDHCP 297 + C +D + L SF+ + + + D G LSDH P Sbjct: 221 IQGDPCKVPAADNKCEIVDKVFYRSGSSVKLSATSFNYVPKLFLQPD----GNILSDHNP 276 Query: 298 ISIDYDF 304 + +D+ + Sbjct: 277 VLVDFTY 283 >gi|118588886|ref|ZP_01546293.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] gi|118438215|gb|EAV44849.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] Length = 238 Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 98/291 (33%), Gaps = 72/291 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ S+NI + + RT + + LD DI+ LQE K Sbjct: 2 LKIGSYNIQ----KSIGVDARRRPDRTL-------KVIQELDCDILALQEAD------KR 44 Query: 84 FPK-----NTWCIFYST--ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 F + I + T + + S AI VR + + L + Sbjct: 45 FGPRESTLDRETILHETDYRPVPFATGDKSLGWHGNAILVRNSIGILDHRRLDLPTLE-- 102 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R AV + + + G+KI V +HL SL + +Q L + Sbjct: 103 -----PRGAVAVDLLVAGEKIRVAAMHL-------SLIGHFR------KKQITSLMHQLH 144 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 + + +P V+ GD N W+ D DS+ F + + ++ + +P Sbjct: 145 EHLDY-LPTVLIGDLNE-----------WR--DSADSIKLFEERYEVT-TPGRSFPSPLP 189 Query: 257 I---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + D + +F+++++ SDH P+ + Sbjct: 190 VGSLDRIITSP---EFIVRQAGVHKSKTARIA-------SDHLPVWANLTL 230 >gi|225867840|ref|YP_002743788.1| hypothetical protein SZO_02270 [Streptococcus equi subsp. zooepidemicus] gi|225701116|emb|CAW97970.1| hypothetical protein SZO_02270 [Streptococcus equi subsp. zooepidemicus] Length = 261 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 39/197 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---MG 75 S ++ + +WNIN ++ G+ + T + L+ADI+ L E Sbjct: 8 SFMTQLTVSTWNIN---QRSGLGRQIPDMVVTE---------LRQLNADIICLTEYVKTE 55 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 S+N + +F L + N+I AI K+ + + + D Sbjct: 56 SHNLFCARLQDIGYEVFEDDRSL------EFGNEILVAI----KSSLISDSKFTTIDNDD 105 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S + + V I GK++ ++ +K+ + Q L I Sbjct: 106 SNPNF-----LRVTVNIFGKELNIVGTRIKTGGKDIIEDFKER------KIQLDNL---I 151 Query: 196 TQKKESLVPFVIAGDFN 212 + S +I GDFN Sbjct: 152 SNLPASHENTIILGDFN 168 >gi|218885153|ref|YP_002434474.1| endonuclease/exonuclease/phosphatase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756107|gb|ACL07006.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 404 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 89/284 (31%), Gaps = 60/284 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD---IVFLQE---M 74 A +R+ +WNI L +RT A + A ++ L+E Sbjct: 68 AAVIRVGAWNIEWLGT---------PDRRTVGGLQTADDIAAAIGASGVHLLALEEAAVT 118 Query: 75 GSYNAVAKVF----------PKNTWCIFYSTERLINHSKRDSNN-DIHTAI-----AVR- 117 A+ W R+ HS+ + A+R Sbjct: 119 DGGTAMRNAVLDGAFARLNAGGAQWSYLLFPARVPPHSRPTVRTSAQCVGVAWDGRALRL 178 Query: 118 KKNVRVLQQSYPLLGAKDSFSR----AGNRRAVELL----------VEINGKKIWVLDIH 163 K+ + + + L +D R AG + V+LL ++ V+ +H Sbjct: 179 KRPPQAITATVDLAAERDLDQRMRQAAGPDQGVKLLARWPHLTVFDAGPGTREFGVVVLH 238 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRKINYLGNN 221 LK+ + SL + + L + + S ++ GD N + + Sbjct: 239 LKASKGVISLPMQAR------AMEGDLLLPGLRKLAASDGLRDVLVLGDLNTR----DHT 288 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 + +T+ + P + + + + + P D ++ + Sbjct: 289 ESVLQTLAGEGFIDCNPGDLPTFFGP--HGKTRKPYDRILLRGD 330 >gi|51473457|ref|YP_067214.1| exonuclease III [Rickettsia typhi str. Wilmington] gi|51459769|gb|AAU03732.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington] Length = 261 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 95/314 (30%), Gaps = 86/314 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ A DI+ LQE S + Sbjct: 1 MKIVTWNINSLRLR----------------IELLRKLAYEYQPDIILLQETKVANSLFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ K S L D A Sbjct: 45 EVIKNIGYEHVIYSGQKS------------YNGVAIISKLPLNNVFSLELYND-DKRHIA 91 Query: 141 GNRRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 +E+ G I ++++LK F LE + +K+W T Sbjct: 92 AIVHGLEIHNFYVPAGGDIPDIEVNLK---FKHKLEY------------VRLMKEWFTTN 136 Query: 199 KESLVPFVIAGDFN--------------RK-INYLGNNDDFWKTIDP-----NDSLIRFP 238 + +I GD N R I++ + + + Sbjct: 137 RTKNDKIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSLLVELQNSLGFIDSNRYFIS 196 Query: 239 KEKDSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 +K + K +D+ + N + L++ + + L Sbjct: 197 LDKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDN---------LKDALFSMNVLSEARDWL 247 Query: 293 --SDHCPISIDYDF 304 SDH P + F Sbjct: 248 RPSDHVPYFVTLHF 261 >gi|326560422|gb|EGE10804.1| catabolite repression control protein [Moraxella catarrhalis 7169] gi|326565843|gb|EGE16005.1| catabolite repression control protein [Moraxella catarrhalis BC1] gi|326571181|gb|EGE21205.1| catabolite repression control protein [Moraxella catarrhalis BC7] Length = 336 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 97/316 (30%), Gaps = 77/316 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MG 75 + Q +R+VS N+N L E ++ + +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFFE---------------WLAVSNADVVCIQESRIT 113 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K PK ++ ++ + +A+ + V D Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAG-----------YAGVAIYSRLPFVSVVDGLGFDLAD 162 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +L + +++ ++L S + + L + LK W Sbjct: 163 SQGRFIC-AQFDLSAQGIDHPVYIASLYLPSGSSGEEAQARKDL---FLEKYRHILKQW- 217 Query: 196 TQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDS 233 ++ ++ GD+N + +L D + + D+ Sbjct: 218 ---RDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWL---DHIYDELGYVDT 271 Query: 234 LIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ D + + + IDY + K + + +Y + Sbjct: 272 FRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR----TLNAWVYKDSWF--- 324 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ IDY Sbjct: 325 ----SDHAPVIIDYQL 336 >gi|288801511|ref|ZP_06406963.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288331592|gb|EFC70078.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 314 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 49/265 (18%) Query: 66 ADIVFLQEMGSYNAVAKV-----FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 DIV L E+ + + + + + + + T Sbjct: 72 PDIVALCEVENDSVMRDLTLRAPLRTLRYQYVMTQSPDLRGIDVALLYSPFT-------- 123 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI----NGKKIWVLDIHLKSFCFLDSLENT 176 S + G R ++L N + ++ +H S + Sbjct: 124 -----FSLLQCHSVRVNPIKGMRPTRDILYVSGRVFNADTLHIMVVHAPSRMGGEHFSRA 178 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDS 233 + C ++++ + D I + I GDFN ++ +++ I N Sbjct: 179 FR--CE-VAKKINEITDSIRSTSVNP-NIAILGDFNDYVGNLSLEMLSNNGLFDISANVK 234 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI--------------L 279 + K K +D+ + + K+ + ++ Sbjct: 235 GLNGTKGT------YKYKGEWDSLDHIFVSEPLRKYWLDCFINDADFLLCNDEKYGGKQP 288 Query: 280 YNEDDIKSRGKRLSDHCPISIDYDF 304 + + SDH P+ ++F Sbjct: 289 FRCYIGAKYHEGYSDHLPLVAHFEF 313 >gi|255946389|ref|XP_002563962.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588697|emb|CAP86816.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1659 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 36/129 (27%), Gaps = 29/129 (22%) Query: 179 PSCSLLSQQAQWLKDWITQKKESL--VPFVIAGDFNRK----------INYLGNNDDFWK 226 +C L + I ++++ V +I GDFNR G D Sbjct: 528 DACDHLRKAI------IKVRRDTGAVVDIIIMGDFNRHNQLXGADEVSFGRQGEADPTIN 581 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 ++ + + + + K ID + N + + Sbjct: 582 LMNKFALSSLLKRGTKTWHSEGQYGDYKSTIDLVLASDNLADLM-----------TKCVI 630 Query: 287 SRGKRLSDH 295 K SDH Sbjct: 631 HGTKHGSDH 639 >gi|46190974|ref|ZP_00120778.2| hypothetical protein Blon03000651 [Bifidobacterium longum DJO10A] gi|189440783|ref|YP_001955864.1| metal-dependent hydrolase [Bifidobacterium longum DJO10A] gi|312134036|ref|YP_004001375.1| elsh2 [Bifidobacterium longum subsp. longum BBMN68] gi|189429218|gb|ACD99366.1| Metal-dependent hydrolase [Bifidobacterium longum DJO10A] gi|311773343|gb|ADQ02831.1| ElsH2 [Bifidobacterium longum subsp. longum BBMN68] Length = 320 Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 70/241 (29%), Gaps = 44/241 (18%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + + +V + +D + + ++ +++ LQE + + V K+ Sbjct: 94 TSDAYARVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKL----------- 141 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 E I H + + L + PL D + V++ G Sbjct: 142 NEAGIEHYLPYAQVSSSDGVF-----GNGLWSATPLADPTDDDVNSSASFMPGGTVDMGG 196 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 ++I + +H + + S L + ++ + ++ GDFN Sbjct: 197 QQIRFVSVHTTAPVPGYWRQWKRS------------LDELGLMREHTDTRYIFMGDFNAT 244 Query: 215 INYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 ++ D + + A ID+ V+DQ Sbjct: 245 YDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG--------IDHVVLDQGMK 296 Query: 268 K 268 Sbjct: 297 A 297 >gi|326561625|gb|EGE11962.1| catabolite repression control protein [Moraxella catarrhalis 103P14B1] gi|326562589|gb|EGE12900.1| catabolite repression control protein [Moraxella catarrhalis 46P47B1] gi|326564034|gb|EGE14278.1| catabolite repression control protein [Moraxella catarrhalis 12P80B1] gi|326570498|gb|EGE20538.1| catabolite repression control protein [Moraxella catarrhalis BC8] gi|326575630|gb|EGE25553.1| catabolite repression control protein [Moraxella catarrhalis CO72] Length = 336 Score = 39.3 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 97/316 (30%), Gaps = 77/316 (24%) Query: 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MG 75 + Q +R+VS N+N L E ++ + +AD+V +QE + Sbjct: 69 QTANQVLRVVSINVNGLRAAEKKGFFE---------------WLAVSNADVVCIQESRIT 113 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 K PK ++ ++ + +A+ + V D Sbjct: 114 HEQWTDKFRPKGWHTHLFAAQKAG-----------YAGVAIYSRLPFVSVVDGLGFDLAD 162 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 S R +L + +++ ++L S + + L + LK W Sbjct: 163 SQGRFIC-AQFDLSAQGIDHPVYIASLYLPSGSSGEEAQARKDL---FLEKYRHILKQW- 217 Query: 196 TQKKESLVPFVIAGDFN----------------------RKINYLGNNDDFWKTIDPNDS 233 ++ ++ GD+N + +L D + + D+ Sbjct: 218 ---RDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCLPHERAWL---DHIYDELGYVDT 271 Query: 234 LIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 K+ D + + + IDY + K + + +Y + Sbjct: 272 FRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR----TLNAWVYKDSWF--- 324 Query: 289 GKRLSDHCPISIDYDF 304 SDH P+ IDY Sbjct: 325 ----SDHAPVIIDYQL 336 >gi|53724878|ref|YP_104766.1| hypothetical protein BMA3294 [Burkholderia mallei ATCC 23344] gi|52428301|gb|AAU48894.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] Length = 230 Score = 39.3 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 68/200 (34%), Gaps = 43/200 (21%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA- 115 +R + + AD+ FLQE A+A+ P+ + + D + T IA Sbjct: 1 MRSWVASTHADVYFLQE-----AMARRMPRP--VLAAGFGAPMAEPVDDIWHCQATEIAR 53 Query: 116 ----------------VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKI 157 R N + L G D + RR + + G + Sbjct: 54 ALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGGAPV 113 Query: 158 WVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINY 217 +L HL + + L +Q W+ WI + + P V+AGDFN ++ Sbjct: 114 TLLCAHL-----------ALTRAARL--RQMHWIAHWIERNARTG-PLVLAGDFN---DW 156 Query: 218 LGNNDDFWKTIDPNDSLIRF 237 ++ + I ++ Sbjct: 157 RNDSIPLFGEIGLSEVATLL 176 >gi|320591538|gb|EFX03977.1| hypothetical protein CMQ_905 [Grosmannia clavigera kw1407] Length = 386 Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 53/232 (22%) Query: 16 CTASVAQKVRLVSWNINTLSEQEG---VSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 ++A ++ LV+WN++ S Q + A DI+FLQ Sbjct: 51 PATTIASELTLVTWNVDAFSPQSEDRLAGILDAVRGSGGGGSAFSAAVATPTHPDILFLQ 110 Query: 73 EMG-------------------SYNAVAKVFPKNTWCI--FYSTERLINHSKRDSNNDIH 111 E+ S A+ N + I S L H S++ Sbjct: 111 EVSPSGLAYLLQDPWVRCHWYVSDTGAAQPSDPNGFSIVSLVSRRFLPEHWSSSSSSSRT 170 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK---IWVLDIHLKSFC 168 I V + + +P L R A+ + + + ++++HL Sbjct: 171 AGIPV---LGALWRIDFPSLFG---------RYAICCEIRMPDPTAAVVRLVNVHL---- 214 Query: 169 FLDSLENTYSPSCSLLS--------QQAQWLKDWITQKKESLVPFVIAGDFN 212 DSL+ S L QQ + T ++AGDFN Sbjct: 215 --DSLQIRPSRRPRQLQIVADMLHCQQPRSTSAVATATSAMAAHGLVAGDFN 264 >gi|227546644|ref|ZP_03976693.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322691706|ref|YP_004221276.1| hypothetical protein BLLJ_1517 [Bifidobacterium longum subsp. longum JCM 1217] gi|227212961|gb|EEI80840.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320456562|dbj|BAJ67184.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 335 Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 70/241 (29%), Gaps = 44/241 (18%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + + +V + +D + + ++ +++ LQE + + V K+ Sbjct: 109 TSDAYARVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKL----------- 156 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 E I H + + L + PL D + V++ G Sbjct: 157 NEAGIEHYLPYAQVSSSDGVF-----GNGLWSATPLADPTDDDVNSSASFMPGGTVDMGG 211 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 ++I + +H + + S L + ++ + ++ GDFN Sbjct: 212 QQIRFVSVHTTAPVPGYWRQWKRS------------LDELGLMREHTDTRYIFMGDFNAT 259 Query: 215 INYLGNNDDF-------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 ++ D + + A ID+ V+DQ Sbjct: 260 YDHTPFRDFLGDRFVDAARESGHGFTFSWPTNRAAVPMFAG--------IDHVVLDQGMK 311 Query: 268 K 268 Sbjct: 312 A 312 >gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] Length = 252 Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 82/303 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L D+ + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAV------------VKKDF---AEIFQKLDADFFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAG 141 + + + A RK + + PL + + Sbjct: 36 ----------TKMQEGQLKLDLPGYRQYFNYAERKGYSGTAIFAKDEPLTVSYGIQAPEF 85 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +E + +L + +S + + ++ Q Sbjct: 86 DHEGRAITLEYP-------NFYLVTSYVPNSGAKLKRLDFRMGWD--KAFHAYLNQLDSH 136 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + F + + Sbjct: 137 K-PVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKED 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYFV + + ++ SDHCP Sbjct: 196 IYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFG-----------SDHCP 244 Query: 298 ISI 300 + + Sbjct: 245 VEL 247 >gi|167521495|ref|XP_001745086.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776700|gb|EDQ90319.1| predicted protein [Monosiga brevicollis MX1] Length = 586 Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 24 VRLVSWNINT-----LSEQEGVSLWKNSVKRTTSD-YTLLRQYAKNLDADIVFLQE 73 +R SWNI LS+ E + +D + LDAD++ +QE Sbjct: 159 LRYASWNIEWFNALFLSDTEFNLAVPSQDIADVNDLLERIACVIVALDADLLAVQE 214 >gi|326797545|ref|YP_004315364.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326548309|gb|ADZ76694.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 348 Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 81/267 (30%), Gaps = 76/267 (28%) Query: 53 DYTLLRQYAKNLDADIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHS 102 D + + K D+V LQE+ S + ++ N + +T R Sbjct: 143 DLSRSARIIKEYKPDLVALQEVDSIAERSGWVDQPKELGRLTGMN-YIFAPATPRSKGKY 201 Query: 103 KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDI 162 IAV K + PL G ++ + + ++ Sbjct: 202 ----------GIAVLTKEKPLAYHYMPLPGQEEPRTLLIVEFQDYI----------FCNV 241 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND 222 HL SL Q + + + + P ++AGDFN + N+D Sbjct: 242 HL-------SLNIDSRR------QSIPIINEALKLYTK---PIILAGDFN---SLPVNDD 282 Query: 223 -----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSE 277 + W+ + + SL P +DY + Sbjct: 283 IIKIQETWQYLS-DPSLKTMPSNDPI-----------WTLDYI-------WGYKANGHAY 323 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 + N I+ + SDH P+ +D +F Sbjct: 324 KVSNTKVIEEKTA--SDHLPVYVDVEF 348 >gi|224539371|ref|ZP_03679910.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] gi|224519006|gb|EEF88111.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 74/277 (26%) Query: 57 LRQYAKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH 111 + +Y K + D++ QE G +++ VF + + + + Sbjct: 133 IARYMKEQEVDVLCFQECGDNKYFPMDSIRNVFSYWRYALIPTEDS-------------- 178 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD 171 +R + YPL+ + + +++ + + + +L+ HL++ Sbjct: 179 ----IRGVLPIAVFSRYPLVNPQFISYQQSANCSMQCDIVLGRDTVRLLNNHLQTTSVSQ 234 Query: 172 SLEN-----TYSPSCSLLSQQAQWLKDWITQ-------KKESLV---------PFVIA-- 208 + S ++A+ ++ IT + E P+ + Sbjct: 235 NRRKWERGLANSNDTR---REAEVVQGAITSLHNNFVKRAEQTDSIRQLVVASPYPVLAC 291 Query: 209 GDFN---RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 GDFN Y +D + + + + + IDY Sbjct: 292 GDFNSLPSSYTYAELSDVLKDGFRTSGRGYMYTY---------RYFKRLLRIDYIFHSPG 342 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + Y D+ SDH P+ ++ Sbjct: 343 IQGY---------RYYSPDLDLC----SDHNPVLMEM 366 >gi|93004917|ref|YP_579354.1| endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] gi|92392595|gb|ABE73870.1| Endonuclease/exonuclease/phosphatase [Psychrobacter cryohalolentis K5] Length = 257 Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 86/260 (33%), Gaps = 45/260 (17%) Query: 56 LLRQYAKNLD---ADIVFLQEMGSYNAVAKV----FPKNTWCIFYSTERLINHS--KRDS 106 ++ A+ LD +DI+ LQE+ N + +P + ++ + +S K Sbjct: 31 KVQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQLENSYGKNSE 90 Query: 107 NNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING--KKIWVLDIHL 164 ++ H AV + P + ++ R + V+ G + VL HL Sbjct: 91 YDNGHHGNAVLSRFPL-----DPKHNVNITVNKLEQRGVLHCEVQPVGWEVPVVVLCAHL 145 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 + E +Q + + +++ + P ++AGDFN D Sbjct: 146 ------NLFERDRI-------KQYEAISNYVRDEIAPDQPLILAGDFN---------DWK 183 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + D S + + C+ + +D+ + L + Sbjct: 184 KMSCDRLASSLGMTEAFKH-CHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHT----- 237 Query: 285 IKSRGKRLSDHCPISIDYDF 304 LSDH P+S + Sbjct: 238 -GKPWSTLSDHLPLSAELAL 256 >gi|56708053|ref|YP_169949.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis SCHU S4] gi|110670524|ref|YP_667081.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis FSC198] gi|134301867|ref|YP_001121836.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis WY96-3418] gi|187931705|ref|YP_001891689.1| exodeoxyribonuclease III [Francisella tularensis subsp. mediasiatica FSC147] gi|224457140|ref|ZP_03665613.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] gi|254370539|ref|ZP_04986544.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874855|ref|ZP_05247565.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] gi|56604545|emb|CAG45592.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis SCHU S4] gi|110320857|emb|CAL08975.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis FSC198] gi|134049644|gb|ABO46715.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis WY96-3418] gi|151568782|gb|EDN34436.1| hypothetical protein FTBG_00321 [Francisella tularensis subsp. tularensis FSC033] gi|187712614|gb|ACD30911.1| exodeoxyribonuclease III [Francisella tularensis subsp. mediasiatica FSC147] gi|254840854|gb|EET19290.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] Length = 262 Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 88/276 (31%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 24 FKTQDVDFLCMQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 72 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 122 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 123 YKM---QFLEKYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 173 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + N+ IDY + Sbjct: 174 LPEEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKD 233 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES + +Y E+ SDH P++I+YD+ Sbjct: 234 KVVPES--DYVYKENWF-------SDHAPLTINYDY 260 >gi|265766011|ref|ZP_06094052.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_16] gi|263253679|gb|EEZ25144.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_16] Length = 344 Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 45/209 (21%) Query: 131 LGAKDSFSRAGNRRAVELL----VEINGKKIWVLDIHL--KSFCFLDSLENTYSPSCSLL 184 A + G+R ++L + + G + ++ HL +S S + L Sbjct: 139 YSALSVGNFKGHRPTRDILHVSGLLLTGDTLDIMVAHLPSRSGGVRQSEPYRLYAA-QKL 197 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSL-------I 235 A L I + + + +I GDFN +Y + + + P S + Sbjct: 198 KDAADSL---INVRPSAKL--IIMGDFN---DYPTDKSVVQVLQALSPEVSTHHDRLYHL 249 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK--------------------FLIQESF 275 K KD + K +D+ ++ E + Sbjct: 250 LARKAKDRNFGSYKYQGEWGLLDHLIVSGTLLDISGTLFTEEKKANVARLPFLLTKDEKY 309 Query: 276 SEI-LYNEDDIKSRGKRLSDHCPISIDYD 303 + + + SDH P+ +D++ Sbjct: 310 GGMQPFRTYVGMKYQEGYSDHLPVYVDFE 338 >gi|254260300|ref|ZP_04951354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|254218989|gb|EET08373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 305 Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 104/321 (32%), Gaps = 62/321 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQE 73 ++ +RL+SWN+ + G +V R D+ D++ QE Sbjct: 12 PPSNGDSTMRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQE 59 Query: 74 M-------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKK 119 + Y +A + P + +F + + + + A+A R Sbjct: 60 LTRGFHALPGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLP 117 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 R L+ + P + + + + R A+E+ + + V+ HL+ + Sbjct: 118 VERALRHALPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVD 173 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDP 230 + L ++A + PF ++ GDFN +D + + + P Sbjct: 174 ALRRLHREAAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYQRFLAP 229 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 RF +R + K + + ++ + + D + R Sbjct: 230 FPDAPRFVDAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLS 282 Query: 291 --------RLSDHCPISIDYD 303 R SDH PI ++ Sbjct: 283 RCEIDGTVRASDHQPIVLELS 303 >gi|228917707|ref|ZP_04081248.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841944|gb|EEM87050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 352 Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 221 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 222 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 274 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 275 WLVELPKDFTDGGFKWAVDSSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 325 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 326 EIVNVQGKDLKFEN---SDHNPVS 346 >gi|228948804|ref|ZP_04111080.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|301056563|ref|YP_003794774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis CI] gi|228810861|gb|EEM57206.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|300378732|gb|ADK07636.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus biovar anthracis str. CI] Length = 352 Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 108/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 221 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 222 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 274 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 325 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 326 EIVNVQGKDLKFEN---SDHNPVS 346 >gi|123506062|ref|XP_001329118.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121912069|gb|EAY16895.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 499 Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 95/326 (29%), Gaps = 73/326 (22%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD--ADIV--FLQEMGSYNA 79 V +++WN+ ++ V +RQ K D AD++ LQE+ Sbjct: 49 VSVITWNVASVKPHPMV-------------IEEIRQSFKCGDKPADVIFIALQEID-MGI 94 Query: 80 VAKVFPK----NTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 V+ + N W E + R T V + V ++ P L Sbjct: 95 VSIMVGSTEVSNKWSKII-GEAVSQEQGRYMVISERTLGGVYAAVI-VRIEAKPKLDVHH 152 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL------LSQQAQ 189 + R V + G I+ C + +C L L Q+ + Sbjct: 153 VKT---IRLGVYGMAANKGAAIFY--------CTMSCARFVVI-ACHLSPHTENLQQRNE 200 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGN-------------------------NDDF 224 ++ + + + + GD N +I +D Sbjct: 201 QVRQLLKTVQGAYDYLIFVGDLNYRITLSYEETCKLIEQGNIERLLEFDQLRNSMKSDRL 260 Query: 225 WKTIDPNDSLIRFPKEKDSRCNA---NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 + + + D C+ + R D ++ + + + +S + Sbjct: 261 IGALKEPPLVFVPTYKFDKNCDVYDTSSKHRVPSWTDRILIKRGPRRLAVDKSKEKNFPK 320 Query: 282 EDDIKSRGK---RLSDHCPISIDYDF 304 I + K SDH ++ Y F Sbjct: 321 MPKIIAFRKGVCMFSDHRSVTASYIF 346 >gi|291298485|ref|YP_003509763.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567705|gb|ADD40670.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 327 Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 29/104 (27%), Gaps = 18/104 (17%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYF 260 P ++AGDFN +++ D + KN K+ ID+ Sbjct: 236 GTPRILAGDFNATLDHRILRDLIAMGYTDAADA---TGSGLTGTWPTDKNFPPKVTIDHV 292 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y I + SDH ++ Sbjct: 293 LTSTGITP---------TTYATHTIPN-----SDHRALTTTMTL 322 >gi|209738408|gb|ACI70073.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 274 Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 4/108 (3%) Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 KK +I GDFN +YL I + + K+ N Sbjct: 155 TKKWKTDNVMILGDFNADGSYLSKKGMKAIRIRSDKNFHWLIKDAVDTTANTGNDNTYDR 214 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 I + + ++ S + S L SDH P+ ++ Sbjct: 215 I--VIYGDDMLDAIVPNSAKPFNFQIAYGLSEEDALKVSDHYPVEVEL 260 >gi|257464350|ref|ZP_05628728.1| hypothetical protein FuD12_10992 [Fusobacterium sp. D12] Length = 217 Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 23/209 (11%) Query: 97 RLINHSKRDSNNDIHTAIAVRKKNVRVLQQS--YPLLGAKDSFSRAGNRRAVELLVEING 154 + H+ ++ + +K V++++Q YP R +I Sbjct: 24 HISQHAVGENGYNEFYGYVWKKDKVKLIKQEGFYPDPD------NKFVREPYGATFKIGN 77 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + H + + + L+ + D+ + +IAGDFN Sbjct: 78 FDFTFVLQH---AVYGKKVLERKLEAAELVK-----VYDYFQDRDIKENDILIAGDFN-- 127 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES 274 L +D + ++ + I + ++ D + + +S Sbjct: 128 ---LSASDKAFDSLYNHRDNITCTLDPKTKTTVG-TKGLSSAYDNIFISKKYTTEYTGKS 183 Query: 275 FSEILYNEDDIKSRGKRLSDHCPISIDYD 303 + + K++SDH PI I+ + Sbjct: 184 G-IVDFTNKKYGEARKKISDHLPIYIEVN 211 >gi|53726143|ref|YP_103011.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 23344] gi|52429566|gb|AAU50159.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 23344] Length = 324 Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 104/321 (32%), Gaps = 62/321 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQE 73 ++ +RL+SWN+ + G +V R D+ D++ QE Sbjct: 31 PPSNGDSTMRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQE 78 Query: 74 M-------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKK 119 + Y +A + P + +F + + + + A+A R Sbjct: 79 LTRGFHALPGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLP 136 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 R L+ + P + + + + R A+E+ + + V+ HL+ + Sbjct: 137 VERALRHALPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVD 192 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDP 230 + L ++A + PF ++ GDFN +D + + + P Sbjct: 193 ALRRLHREAAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYRRFLAP 248 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 RF +R + K + + ++ + + D + R Sbjct: 249 FPDAPRFVDAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLS 301 Query: 291 --------RLSDHCPISIDYD 303 R SDH PI ++ Sbjct: 302 RCEIDGTVRASDHQPIVLELS 322 >gi|294934513|ref|XP_002781118.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] gi|239891424|gb|EER12913.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] Length = 1170 Score = 39.3 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 85/225 (37%), Gaps = 33/225 (14%) Query: 9 LVFFLVPCTASVAQKVRLVSWNIN---TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 L + + Q ++L++WNI + Q+ ++ + +++Q A L+ Sbjct: 296 LSVYGALDHIATGQAIKLLNWNILADIYCTPQQYPYCPPWALSWNYRRHLIIKQIAA-LE 354 Query: 66 ADIVFLQEMGSYNAVAKVFP------------KNTWCIFYSTE-----RLINHSKRDSNN 108 DIV LQE+ S + + P T IF ++ R S Sbjct: 355 GDIVCLQEVQSDHLYTSLLPALEGLGFGYLYAPKTRRIFTDKYCEEGCAILYRKSRFSVV 414 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR-AGNRRAVELLVEINGKKIWVLDIHLKSF 167 D T + Y +R + A+ L+E + + + +++ H+ + Sbjct: 415 DSFT---IEFDAHAKDSARYQGARNTKQRNRLSKGNVALACLLE-DSRPLGIVNTHITA- 469 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 +D+ + + +L + ++ W + ++P ++ GDFN Sbjct: 470 -DVDAGDVKLWQAMCML----EVVQGWSNS-QNGVLPVIVCGDFN 508 >gi|49481107|ref|YP_039092.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332663|gb|AAT63309.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 352 Score = 39.3 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 107/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITNPMGYAEAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 221 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 222 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 274 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N ++ Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPNV--EIVNVQG 332 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + + SDH P+S Sbjct: 333 KNLKFEN----------SDHNPVS 346 >gi|30023103|ref|NP_834734.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|229049761|ref|ZP_04194318.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|229112516|ref|ZP_04242053.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|229130328|ref|ZP_04259287.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|29898663|gb|AAP11935.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|228653261|gb|EEL09140.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228670896|gb|EEL26203.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228722674|gb|EEL74062.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] Length = 352 Score = 39.3 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVPIINPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|262404202|ref|ZP_06080757.1| exodeoxyribonuclease III [Vibrio sp. RC586] gi|262349234|gb|EEY98372.1| exodeoxyribonuclease III [Vibrio sp. RC586] Length = 268 Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDDAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + V+ +G K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDSEEHQK-----RMIMATFVDQDGNKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLGEHRSNAERLVVMGDIN 154 >gi|183602104|ref|ZP_02963472.1| hypothetical protein BIFLAC_07617 [Bifidobacterium animalis subsp. lactis HN019] gi|219683016|ref|YP_002469399.1| endonuclease/exonuclease/phosphatase [Bifidobacterium animalis subsp. lactis AD011] gi|241191336|ref|YP_002968730.1| hypothetical protein Balac_1318 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196742|ref|YP_002970297.1| hypothetical protein Balat_1318 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218597|gb|EDT89240.1| hypothetical protein BIFLAC_07617 [Bifidobacterium animalis subsp. lactis HN019] gi|219620666|gb|ACL28823.1| endonuclease/exonuclease/phosphatase [Bifidobacterium animalis subsp. lactis AD011] gi|240249728|gb|ACS46668.1| hypothetical protein Balac_1318 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251296|gb|ACS48235.1| hypothetical protein Balat_1318 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177461|gb|ADC84707.1| Hypothetical membrane spanning protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794329|gb|ADG33864.1| hypothetical protein BalV_1276 [Bifidobacterium animalis subsp. lactis V9] Length = 341 Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 45/267 (16%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYS 94 + L +V + +D + ++ +++ LQE + + + ++ + Sbjct: 109 TADAVARLMTCNVYKGHADAAAIVNAVRDNHVEVLALQET-TPDFLKRLEEAGISQLL-- 165 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 + S+ D + L P D S A + + Sbjct: 166 ------PYSQTSSADGYFG----NALFSALPFENP--SQTDVDSIASYMPGGTVGFDNGA 213 Query: 155 KKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + +H +S + + S + + + L + +++ GDFN Sbjct: 214 IPVRFVSVHTQSPTEGRFEKWSRSIA------ELKQLN------EHPDTDYILMGDFNST 261 Query: 215 INYLGNNDDF------WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMD----- 263 ++ D + + + +P + K L ID+ V Sbjct: 262 WDHAVFRDMLGTRFQDAAEVSGHGLVFTWPAD-------RKYLPAFAGIDHIVTSKDVTI 314 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGK 290 I S L D+ Sbjct: 315 GQVNSLTIPGSDHRALLATVDVSGLRH 341 >gi|304311554|ref|YP_003811152.1| hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] gi|301797287|emb|CBL45507.1| Hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] Length = 306 Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 73/238 (30%), Gaps = 47/238 (19%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D V LQE+ ++ F +++ + ++ + N D + Sbjct: 104 DFVALQEVDG-GSIRSSFIN--QVRYFAEQGQFDYWYQQLNRD-FGRFGQYSNGILSRYI 159 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + R A+ + V+ +HL E + + Sbjct: 160 PYEIQD--HKLPGLKGRGAIVARYGDLSNPLVVVCLHLALG------ERARN-------R 204 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 Q +L+D I ++ GD N + + T LI + + + Sbjct: 205 QLAYLRDLIGI----AEHVIVMGDLN------CSGEQILATPLRETHLI----QANGSHH 250 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + ID+ ++ + + ++ LSDH PI+++ Sbjct: 251 TYPSWKPQRSIDHILVSPSLHIRR--------------VEVLDVALSDHRPIAMEIKL 294 >gi|228936354|ref|ZP_04099152.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823186|gb|EEM69020.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 337 Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 104/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMGSYNAVAKVFPKNTWCIF---YSTERLINHSKRDSN----------NDIHTAIAVR 117 LQE+ ++ + F N S D+ ++ Sbjct: 95 LQEVD-IKSM-RSFDVNGHEFLKKGLSDYASSFGKNYDTKWVPVPITSPMGYAEAGLSTF 152 Query: 118 KKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 153 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YDEGG 209 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ + Sbjct: 210 KIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPDWLV 262 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 263 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 313 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 314 NVQGKDLKFEN---SDHNPVS 331 >gi|224069930|ref|XP_002193896.1| PREDICTED: deoxyribonuclease I-like 2 [Taeniopygia guttata] Length = 330 Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 13/118 (11%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W + GDFN +Y+ +D + ND + Sbjct: 221 LAIINKW------GTDNLMFLGDFNADCSYVQPSDWSSIRLRTNDIFKWLIPDSADTTVG 274 Query: 248 NKNLRNKIPIDYFVMDQNAYKF-LIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + D V+ N K ++ S + + + L SDH P+ + Sbjct: 275 KSDCAY----DRIVVCGNKLKRSILSNSAGIYNFQRALQLDQEEALAVSDHYPVEVKL 328 >gi|307180084|gb|EFN68152.1| Putative neutral sphingomyelinase [Camponotus floridanus] Length = 360 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 84/267 (31%), Gaps = 31/267 (11%) Query: 54 YTLLRQYAKNLDA---DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 T + A+ + DI+ LQE+ S KV I +S + + Sbjct: 25 ITRMSAIAEKCASREYDIICLQEVWSVEDF-KVIKAKVQEIL-------PYSHYFYSGVV 76 Query: 111 HTAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVEL---LVEINGKKIWVLDIHLK 165 + + + R V+ +PL G + ++I I V HL Sbjct: 77 GSGVCILSRYPIYDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNINVYTAHLH 136 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---RKINYLGNN- 221 + + EN + +L QA ++ ++AGD N + + Y Sbjct: 137 A---EYNRENDEYMAHRVL--QAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRIIRG 191 Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI---PIDYFVMDQNAYKFLIQESFSE 277 + S I + ++ +K R + ID+ + + + +F Sbjct: 192 VGGLMDACPSSASHIGTNECANNSYTCSKFARTRPDGKRIDHILYLGSKSVKVEITNFQH 251 Query: 278 ILYNEDDIKSRGKRLSDHCPISIDYDF 304 L N K SDH + F Sbjct: 252 PLPNRVPYKDFSY--SDHEAVMATLKF 276 >gi|291516299|emb|CBK69915.1| Metal-dependent hydrolase [Bifidobacterium longum subsp. longum F8] Length = 320 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 27/152 (17%) Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + PL D + V++ G++I + +H + + S Sbjct: 166 LWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPGYWRQWKRS----- 220 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIR 236 L + ++ + ++ GDFN ++ D + + Sbjct: 221 -------LDELGLMREHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSW 273 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 A ID+ V+DQ Sbjct: 274 PTNRAAVPMFAG--------IDHVVLDQGMKA 297 >gi|238786156|ref|ZP_04630108.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] gi|238712925|gb|EEQ04985.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] Length = 271 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 79/309 (25%), Gaps = 79/309 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFP 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + V ++ + +FY H +A + ++ + + Sbjct: 47 LEDV-SQHGYHVFY------------HGQKGHYGVA-----LLTKEKPLAVRRGFPTDEE 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + V++ F + + L+ ++ Q+ Sbjct: 89 DAQRRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQH 143 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPK 239 + +I GD N I W N L+ + Sbjct: 144 SADSQLLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLAQLQNWGLVDTFR 203 Query: 240 EKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + CN + ID + I D Sbjct: 204 AANPECNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAARCIATGI-------DYEIRGM 256 Query: 290 KRLSDHCPI 298 ++ SDH P+ Sbjct: 257 EKPSDHAPV 265 >gi|198422742|ref|XP_002124404.1| PREDICTED: similar to endonuclease/exonuclease/phosphatase family domain containing 1 [Ciona intestinalis] Length = 560 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 93/289 (32%), Gaps = 38/289 (13%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 VR+ +WN+ S +N R T+L K I+ +QE+ NA+ ++ Sbjct: 261 VRVATWNLQHCSCD----KTRNPGVREVVCMTILENGVK-----ILGVQELDDENALNEI 311 Query: 84 FP-------KNTWCIFYST----ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 N ++ L + ++ + V + L Sbjct: 312 VNELNNPTLPNIQRFKSTSTWKCSVLPTAEGKLFQGTEYSGFLWEESIVDY---NNSALV 368 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 K + R+ + ++ + ++++H+ D + + + L Sbjct: 369 KKSVGGKKFARQPMLGFFKVGKVDLVLVNLHM-----EDDASDDLMRFGENVKDLPEILD 423 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 E VI GDF +G ++ ++ + P + N K+++ Sbjct: 424 AVDHHLDEEEKVVVILGDF-----SVGPDETEFEALGAKSYKPVIPCNVPTNIN-RKDMK 477 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNED----DIKSRGKRLSDHCP 297 D ++Q+A E + D S G +SDHCP Sbjct: 478 GSRCRDNLWLNQSATALYTSEWKVVRNGLTNPWIPDGWSWGGVVSDHCP 526 >gi|110803483|ref|YP_698449.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] gi|110683984|gb|ABG87354.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] Length = 262 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 12/109 (11%) Query: 199 KESLVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKI 255 + P++I GDFN + D+ + I N++ + K Sbjct: 162 EIYKTPYIIMGDFNCYLE-----DNLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKG 216 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D ++D L + N DD K SDH P+ + + Sbjct: 217 GYDGRIID----YILYSKECEIKSLNIDDRKINWGYPSDHYPVICELEL 261 >gi|111226398|ref|XP_001134527.1| hypothetical protein DDB_G0288017 [Dictyostelium discoideum AX4] gi|121962461|sp|Q1ZXD9|Y8017_DICDI RecName: Full=Sphingomyelinase DDB_G0288017 gi|90970540|gb|EAS66844.1| hypothetical protein DDB_G0288017 [Dictyostelium discoideum AX4] Length = 458 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 74/239 (30%), Gaps = 34/239 (14%) Query: 35 SEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-DADIVFLQEMGSYNAVA--KVFPKNTWC- 90 S SL + ++ +SDY + L DI+ LQE+ S + + K Sbjct: 96 SPPPPSSLKQQNLHNNSSDYQSIAPSKSILAQYDIICLQELFSAFSYRQRRFIEKAEQQG 155 Query: 91 -IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELL 149 +Y+T + + D + + V Y D S G + Sbjct: 156 FQYYATSPSPPYLRSTFLVDGGLTVISKYPIVASDFFLYEQGVDSDMLSSKGVLYTKIKV 215 Query: 150 V-----EINGKKIWVLDIHL--------------KSFCFLDSLENTYSPSCSLLSQQAQW 190 V + I + H+ K+ D N + + L+ Q Sbjct: 216 VPTGSSNDDENFIHLFTTHMQASYAPKSDGSKTVKASATQDQASNYKNDNIRLI--QLNQ 273 Query: 191 LKDWITQKKESLVPFVIA-GDFNRK--INYLGNND-----DFWKTIDPNDSLIRFPKEK 241 L+++I +K +I GD N ++ D + + +D +K Sbjct: 274 LREFIFEKTFKDKSIIILAGDLNVNGRVSKDDPKDGDSYLQMLELLSNSDQRDLPTGKK 332 >gi|228910912|ref|ZP_04074721.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228848863|gb|EEM93708.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 352 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|118592059|ref|ZP_01549453.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118435355|gb|EAV42002.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 269 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 +++LV+WNIN V L V Q + D++ LQE +A Sbjct: 2 TDRIKLVTWNIN------SVRLRMPIV----------EQLIDEVAPDVICLQETKCPDAN 45 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 FP+N + + + +A + + + +D Sbjct: 46 ---FPENAF------RKAGYEHMAIHGQKGYHGVA------TLSRLPLSNIEKRDFCQVG 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---WITQ 197 +R V + V NG I + + ++ + D + T +P + ++ + W+ Sbjct: 91 DSRH-VAVDVPFNGSSIRLHNFYVPAG--GDEPDRTINP---KFGHKLDFMNEMLGWLKG 144 Query: 198 KKESLVPFVIAGDFN 212 ++ + P ++ GD N Sbjct: 145 EETAK-PAILVGDLN 158 >gi|23466288|ref|NP_696891.1| hypothetical protein BL1743 [Bifidobacterium longum NCC2705] gi|23327039|gb|AAN25527.1| hypothetical transmembrane protein with unknown function [Bifidobacterium longum NCC2705] Length = 370 Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 27/152 (17%) Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + PL D + V++ G++I + +H + + S Sbjct: 216 LWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPGYWRQWKRS----- 270 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIR 236 L + ++ + ++ GDFN ++ D + + Sbjct: 271 -------LDELGLMREHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSW 323 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 A ID+ V+DQ Sbjct: 324 PTNRAAVPMFAG--------IDHVVLDQGMKA 347 >gi|313499091|gb|ADR60457.1| Exonuclease III [Pseudomonas putida BIRD-1] Length = 270 Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE KV Sbjct: 1 MKIVCFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + H +A+ + + +D A R Sbjct: 38 ---SDDQFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + +G I +++ F + + L+ + + + Sbjct: 91 FIWGTFADADGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRNDQ 145 Query: 204 PFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLIR 236 P ++ GD N R + + W +D L Sbjct: 146 PVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLYP 205 Query: 237 FPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ S + + + ID + Q + D ++ Sbjct: 206 EVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQLVPRIKAAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|148548014|ref|YP_001268116.1| exonuclease III [Pseudomonas putida F1] gi|148512072|gb|ABQ78932.1| Exodeoxyribonuclease III [Pseudomonas putida F1] Length = 270 Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 84/312 (26%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE KV Sbjct: 1 MKIVCFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + H +A+ + + +D A R Sbjct: 38 ---SDDQFPLADVQALGYHVHYHGQKGHYGVALLSRQAPLSLHKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG I +++ F + + L+ + + + Sbjct: 91 FIWGTFADANGSPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFRNDQ 145 Query: 204 PFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLIR 236 P ++ GD N R + + W +D L Sbjct: 146 PVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLYP 205 Query: 237 FPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ S + + + ID + Q + D ++ Sbjct: 206 EVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPLVPRIKAAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|289674481|ref|ZP_06495371.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae FF5] Length = 269 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 73/248 (29%), Gaps = 67/248 (27%) Query: 67 DIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D+V LQE+ +A++ W + R + + SN + Sbjct: 61 DLVALQEVDGGSMRSGFVNQVEHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLS 113 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + ++ P R A+ + + V+ +HL Sbjct: 114 RLRPTKIEDHPLPGPAG---------RGAILVRFGEGEDALVVVMMHLALGT-------- 156 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++Q +I + V+ GD N N L + L Sbjct: 157 -----RTRTRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGL 200 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ + R + +D+ ++ + ++ + +SDH Sbjct: 201 LAPQIEATF---PSWRPQRCLDHILLSP--------------TLTLERVQVLAQPISDHL 243 Query: 297 PISIDYDF 304 P++++ Sbjct: 244 PVAVEIRL 251 >gi|261493298|ref|ZP_05989824.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496564|ref|ZP_05992944.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307767|gb|EEY09090.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310942|gb|EEY12119.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 291 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 42/206 (20%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 +FF + T + ++ +S+NIN L + L + D++ Sbjct: 11 IFFFILQTLRLGLSMKFISFNINGLRARPH----------------QLEAIIEKHQPDVL 54 Query: 70 FLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQ 126 LQE + + + + +F H +A + KK +++ Sbjct: 55 GLQEIKVADEDFPYDLVNHLGYHVF------------HHGQKGHYGVALLTKKEPIAVRK 102 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 +P D+ R + +E + + VL+ F ++ + Sbjct: 103 GFPT-DVLDAQKRM-----IMADIETDFGVLTVLN-----GYFPQGENRSHETKFPAKQK 151 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFN 212 L++++ + + P +I GD N Sbjct: 152 FYADLQNYLESELKPENPIIIMGDMN 177 >gi|168698628|ref|ZP_02730905.1| hypothetical protein GobsU_03844 [Gemmata obscuriglobus UQM 2246] Length = 290 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 87/323 (26%), Gaps = 54/323 (16%) Query: 1 MIRKYVLALVFFLVPCTASVAQK---VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 M R L L + + VR++S+NI + ++G + W L Sbjct: 1 MHRFLYLLLAAIGLAPAVNAQPPKGDVRVMSFNIRYGTAKDGENHWDKRK-------EFL 53 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNT---WCIFYSTERLINHSKRDSNNDIHTAI 114 K D++ QE + F + + A Sbjct: 54 ADTVKAFGPDLLGTQET---LIFQRDFLSQKLTGYEGLGVGREDGKEKGETTALYWRKAR 110 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFL 170 + P + S+ + R A + ++ N K + ++ H F Sbjct: 111 FEKTDGGHFWLSETPNVAGSKSWDSSLPRMATWVKLKDLAKPNAKPVLFVNTH-----FD 165 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKI--NYLGN 220 + L+ + L V+ GDFN R + N Sbjct: 166 HIGKKARIEGAKLIRDRIGALGA--------GCSVVVTGDFNSGEDSEPYRTLFAARDKN 217 Query: 221 NDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY 280 + + + A ++ ID+ + + + + Sbjct: 218 ESPVMDSFRAAHPKREPNEGTFTNFKAGPVKGDR--IDWIGVS---RDWTVTGA------ 266 Query: 281 NEDDIKSRGKRLSDHCPISIDYD 303 D + G+ SDH P++ Sbjct: 267 GIDRTEKDGRTPSDHFPVTATLS 289 >gi|322689757|ref|YP_004209491.1| hypothetical protein BLIF_1575 [Bifidobacterium longum subsp. infantis 157F] gi|320461093|dbj|BAJ71713.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 335 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 27/152 (17%) Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + PL D + V++ G++I + +H + + S Sbjct: 181 LWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPGYWRQWKRS----- 235 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIR 236 L + ++ + ++ GDFN ++ D + + Sbjct: 236 -------LDELGLMREHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSW 288 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 A ID+ V+DQ Sbjct: 289 PTNRAAVPMFAG--------IDHVVLDQGMKA 312 >gi|255008060|ref|ZP_05280186.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 3_1_12] gi|313145777|ref|ZP_07807970.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134544|gb|EFR51904.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 285 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 101/309 (32%), Gaps = 64/309 (20%) Query: 8 ALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD 67 + L C++S VRL ++NI + + ++ WK R + ++ + D Sbjct: 11 FITLLLAGCSSSPISHVRLATFNIRYDNPGDSLNSWKYRKDR-------VCEFIREKQPD 63 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ-- 125 ++ +QE+ + + + + + RK +L Sbjct: 64 VLGMQEVLHHQLEDLLAGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDSN 117 Query: 126 ----QSYPLLGAKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSP 179 +P K + A R A + + GK+ +++ H F Sbjct: 118 TFWLSEHPDSVGKLGWDAACTRVATWAKLKEKSTGKEFLMVNTH-----FDHVGTEARRN 172 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFP 238 S L+ + + + P ++ GDFN + + +KTI N+ +++ Sbjct: 173 SALLIIDKIKEI--------AGTHPSMMTGDFN------VSEEWEAYKTITSNEFILKDA 218 Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDIK 286 + ++ + + ID+ + A +I + ++ Y Sbjct: 219 WKIAAKQTGESYTFHDFGRVPVAEREKIDFIFVTPQIKVADAEIISSAITDSTY------ 272 Query: 287 SRGKRLSDH 295 LSDH Sbjct: 273 -----LSDH 276 >gi|238797343|ref|ZP_04640843.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] gi|238718774|gb|EEQ10590.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] Length = 271 Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 80/309 (25%), Gaps = 79/309 (25%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNA 79 ++ VS+NIN L + L + D++ LQE Sbjct: 3 TMKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFP 46 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSR 139 + V ++ + +FY H +A + ++ + + Sbjct: 47 LEDV-SQHGYHVFY------------HGQKGHYGVA-----LLTKEKPLAVRRGFPTDEE 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + + + V++ F + + L+ ++ Q+ Sbjct: 89 DAQRRIIMADIATPQGPLTVIN-----GYFPQGESRDHPIKFPAKERFYADLQQYLEQQL 143 Query: 200 ESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLIRFPK 239 + +I GD N I W + L+ + Sbjct: 144 SADSQVLIMGDINISPTDLDIGIGEENRKRWLRTGKCSFLPEERAWLERLQSWGLVDTFR 203 Query: 240 EKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + CN + ID + Q I D Sbjct: 204 AANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGI-------DYEIRGM 256 Query: 290 KRLSDHCPI 298 ++ SDH P+ Sbjct: 257 EKPSDHAPV 265 >gi|328354254|emb|CCA40651.1| endonuclease III [Pichia pastoris CBS 7435] Length = 731 Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 22/125 (17%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDY----TLLRQYAKNLDADIVFLQEM 74 S + ++NI L++ V D+ LL + ++L+ DI+ QEM Sbjct: 37 SYGDTFSVSTYNI--LNQHYIWPQVFKYVPENDIDWNYRQQLLDKNFRDLNTDIMCFQEM 94 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134 + I+ + +S S + +I VRKK +S L Sbjct: 95 E-------------YDIY---DTHWKNSGESSPLKDYRSIFVRKKPPHYWTKSERNLDGV 138 Query: 135 DSFSR 139 F + Sbjct: 139 SIFYK 143 >gi|315925763|ref|ZP_07921970.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] gi|315620872|gb|EFV00846.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] Length = 254 Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 34/133 (25%) Query: 195 ITQKKESLVPFVIAGDFN---RKINYLGNN----------------DDFWKTIDPNDSLI 235 + ++ +I GD N R+I+ D F+ + Sbjct: 133 VDERVARGEKVIICGDVNTAHREIDLKNPKSNAKRSGFLPIEREWMDHFFAGGYIDTYRY 192 Query: 236 RFPKEKDSRCNANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 +P++ + + K IDYF NA L + + Sbjct: 193 FYPEQVTYSWWSYRFNARKNNAGWRIDYFFASDNAKDLLADAAIHTDVTG---------- 242 Query: 292 LSDHCPISIDYDF 304 SDHCPIS+ + Sbjct: 243 -SDHCPISLTLNL 254 >gi|300725857|ref|ZP_07059321.1| AP endonuclease domain protein [Prevotella bryantii B14] gi|299776845|gb|EFI73391.1| AP endonuclease domain protein [Prevotella bryantii B14] Length = 352 Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 79/268 (29%), Gaps = 65/268 (24%) Query: 59 QYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 QY K DI+ LQE G I+ +S S+ Sbjct: 114 QYIKKQHPDILCLQEAGCQEIGQANIDSVLDKIY----PYKQYSHHSSS----------N 159 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL-KSFCFLDSLE--- 174 L +P++ + + +V V I+ +W+++ HL + D + Sbjct: 160 SETIALYSKFPIVDSVRINYPSKGNFSVAYRVTIDEDSVWIINNHLETTGLSQDERKGFK 219 Query: 175 --------NTYSPSCSLL------------SQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 + + S S L + +A + ++I + ++ GDFN Sbjct: 220 LMMKGEMDHHVAKSTSKLIITRLGESSAKRAVEADAVSEFIEHHQ--HESIILCGDFNDG 277 Query: 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR---NKIPIDYFVMDQNAYKFLI 271 ++ K ID +S + + ID + + F Sbjct: 278 PISYTHHTIVKKLID---------CYIESGFGPGISYHKGGFFVRIDNIMCTSDWEPF-- 326 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPIS 299 +LSDH PIS Sbjct: 327 -----------QCNVDNKIKLSDHYPIS 343 >gi|325916353|ref|ZP_08178628.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325537401|gb|EGD09122.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 255 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 85/297 (28%), Gaps = 60/297 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQ---------EGVSLWKNSVKRTTSD-YTLLRQYAKNLD 65 AS ++ +R+++ NI S KRT+ D L D Sbjct: 1 MNASDSRTLRVLTANIQAGSSTRRYSDYVTRSWSHALPLGAKRTSLDSIAKLAG-----D 55 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DIV LQE ++ F T + + ++ N + +A + Sbjct: 56 RDIVGLQE-ADPGSLRSGFTNQTH--YLAERAGFHYWSHQPNRRMG-GVASSANGLLSKL 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS 185 + + R G R + + V HL + + L Sbjct: 112 EPLEVQDHA-LPGRIGGRGILLAKFGQGRDGLAVAVAHLSLG---------ANSRMAQL- 160 Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 +I + ++ GDFN + + + + L P Sbjct: 161 -------AFIAELLSEHPNAMLMGDFN-----CVADRPEMQALYRHTRLQ-PPSGVVHTF 207 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R ID+ ++ +I+ + ++ SDH + +D Sbjct: 208 ---PSWRPDRAIDHILVSD---SLVIEHT-----------EAIPAAFSDHLAVGMDI 247 >gi|325856403|ref|ZP_08172119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325483587|gb|EGC86559.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 291 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 93/321 (28%), Gaps = 55/321 (17%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLL 57 ++ + ++ L+ C+ S AQ++ + ++NI + EG + + + L Sbjct: 8 IMYRLTTLILAMLLTCSLS-AQQLYVGTYNIRYDNPNDRKEGNAWAQRCPQ--------L 58 Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + QE+ + + + + AI R Sbjct: 59 CDFINFEQPAVFGTQEVLATQLRDLLQGLEGYAYIGVGRDDGREEGE------YAAIFYR 112 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-------GKKIWVLDIHLKSFCFL 170 K +++L L G A + GK+ + + H+ Sbjct: 113 KDLLKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----D 167 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 S L+ Q+ L P ++ GDFN + D+ + Sbjct: 168 HVGTVARRESTRLILQRIGQL--------AKSQPTILTGDFN-----VDQTDEIYGIFSR 214 Query: 231 NDSLIRFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNED 283 + L R R+ ID+ + + I N Sbjct: 215 SGILRDCYAHARQRMAPTGTWNDFMQDSRSNARIDHVFVSSD-----FDIQHYAIFTNSY 269 Query: 284 DIKSRGKRLSDHCPISIDYDF 304 + + +SDH P+ + F Sbjct: 270 WLGKSRRNISDHYPVMVKLSF 290 >gi|299142905|ref|ZP_07036032.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] gi|298575634|gb|EFI47513.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] Length = 313 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 83/263 (31%), Gaps = 45/263 (17%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 D+V L E+ + + + T+R + R ++ + VR +V +L Sbjct: 72 PDLVALCEVENDTVMRDL-----------TKRSLLRQARYEYVMTNS-LDVRGIDVALLY 119 Query: 126 QSYPLL----GAKDSFSRAGNRRAVELLVE----INGKKIWVLDIHLKSFCFLDSLENTY 177 + A G R ++L I+G + V +H S + Sbjct: 120 SPFTFRLLNWHAIRVAPIKGMRPTRDILYAAGQIISGDTLHVFVVHAPSRSGGEIATRPN 179 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + + L++ + K + V +IAGDFN + + + + Sbjct: 180 RMAV------VKRLQEAVDSVKSNSVSARIIIAGDFNDYTQDVSIQYLISRGLTDVSASA 233 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILY--NEDDI-------- 285 + K +D+ + + + ++ + +D++ Sbjct: 234 KGTHGAKGT---YKYRGEWGSLDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLR 290 Query: 286 ----KSRGKRLSDHCPISIDYDF 304 SDH P+ + +DF Sbjct: 291 NFHGAKYLNGFSDHLPLVVKFDF 313 >gi|255721849|ref|XP_002545859.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404] gi|240136348|gb|EER35901.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404] Length = 436 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 33/200 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 + +W + +S K +R + L A D DIV LQE+ Sbjct: 22 LTFNTWGLKYIS--------KFRKQRLRAIADSLANPASEDDDYDIVALQEV-------- 65 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHT--AIAVRKKNVRVLQ--QSYPLLGAKDSFS 138 + + W R+ +R + I + +AV K +P+ G +F Sbjct: 66 -WCEEDWQYLDLVCRVRYPYRRIFRSGIVSGPGLAVLSKIPVTETFLYRFPINGRPSAFF 124 Query: 139 RAGNRRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R + V + I +L+ H+ + + +C QA Sbjct: 125 RGDFYVGKSIAVTMFQPQHADILPIALLNSHMHAPYGKGDASYSTHRAC-----QAWDFA 179 Query: 193 DWITQKKESLVPFVIAGDFN 212 + K++ + GD N Sbjct: 180 KLVRMLKKAGYAVIQVGDLN 199 >gi|239621676|ref|ZP_04664707.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482419|ref|ZP_07941436.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp. 12_1_47BFAA] gi|239515551|gb|EEQ55418.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916079|gb|EFV37484.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp. 12_1_47BFAA] Length = 370 Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 27/152 (17%) Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L + PL D + V++ G++I + +H + + S Sbjct: 216 LWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPGYWRQWKRS----- 270 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF-------WKTIDPNDSLIR 236 L + ++ + ++ GDFN ++ D + + Sbjct: 271 -------LDELGLMREHTDTRYIFMGDFNATYDHTPFRDFLGDRFVDAARESGHGFTFSW 323 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 A ID+ V+DQ Sbjct: 324 PTNRAAVPMFAG--------IDHVVLDQGMKA 347 >gi|229515240|ref|ZP_04404700.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] gi|229520320|ref|ZP_04409746.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229342686|gb|EEO07678.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229347945|gb|EEO12904.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] Length = 268 Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + NG+K +L+ + D+ Sbjct: 65 VAILCKQTPVEVIKGFPTDNEEHQK-----RMIMATFADQNGQKTTILNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLCEHRSNSERLVVMGDIN 154 >gi|229818105|ref|ZP_04448387.1| hypothetical protein BIFANG_03396 [Bifidobacterium angulatum DSM 20098] gi|229784709|gb|EEP20823.1| hypothetical protein BIFANG_03396 [Bifidobacterium angulatum DSM 20098] Length = 362 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 49/176 (27%), Gaps = 31/176 (17%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 +D + +N +++ LQE S F + + + + Sbjct: 149 EADAQAIVDLVRNERVEVLALQETTSE--------------FIEKLKNAHIETYLPYSQV 194 Query: 111 HT--AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 T A + P+ A S A + K++ + +H S Sbjct: 195 STMDG-AYGNGLWSATPLADPVDDA--VNSSASFMPGGTVAFVGGQKQVRFVSVHTTSPW 251 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 D + S L + + +V GDFN +++ + Sbjct: 252 QGDWRQWKRSLDELGLK------------RADEGTRYVFMGDFNATMDHASMREFL 295 >gi|124514320|gb|EAY55834.1| Exodeoxyribonuclease III [Leptospirillum rubarum] Length = 265 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 96/308 (31%), Gaps = 81/308 (26%) Query: 20 VAQKV-RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYN 78 A+ + + +WN+N+L + + + + R AD+V LQE + Sbjct: 6 SARPLFKATTWNVNSLKVR--LPQVLDWLLREK--------------ADVVCLQETKLPD 49 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGAKDSF 137 A + R I + S + +A+ + + + S Sbjct: 50 A----------QFPFQAFREIGYDAVWSGQPTYNGVAILSNTPIEMTETSMDDHPDDHRR 99 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD---W 194 + R V ++ ++++ + LDS + Y +WL + Sbjct: 100 FLSARVRGVRIV-----------NVYVPNGQDLDSPKFAYK---------LEWLNRLTRY 139 Query: 195 ITQKKESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPK 239 I + + + P ++ GDFN +I + + I + Sbjct: 140 IEKVRAAPDPVLLMGDFNIVPGDLDTWDPAGFKDQIFHSPPERNALGNIFRTGFADLYRT 199 Query: 240 EKDSRC-------NANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 R RN+ ID + + E E+ + + K+ R Sbjct: 200 LYPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPP-----LSEQCQEVFIDREARKAE--R 252 Query: 292 LSDHCPIS 299 SDH P++ Sbjct: 253 PSDHVPVT 260 >gi|70954382|ref|XP_746240.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase) [Plasmodium chabaudi chabaudi] gi|56526785|emb|CAH87963.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase), putative [Plasmodium chabaudi chabaudi] Length = 350 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 14/90 (15%) Query: 216 NYLGNNDDFWKT---IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 NY ND +K I+ N R P CN ID+F++ ++ + Sbjct: 270 NYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRAMR------IDHFIVSKSLLDKI-- 321 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E+ Y+ G SDHCP+ ++ Sbjct: 322 ENVEIHGYSVSHTNFYG---SDHCPVILNM 348 >gi|323344671|ref|ZP_08084895.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] gi|323093941|gb|EFZ36518.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] Length = 305 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 27/132 (20%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL--- 251 I + P ++ GDFN + ND+ +K + L R N Sbjct: 177 IKEITGGNAPVILTGDFN-----VDQNDEIFKIFSASGILKDSYSAAKMRFAENGTFNDF 231 Query: 252 ----RNKIPIDYFVMDQ----------NAYKFLIQESFSEIL----YNEDDIKSRGKR-L 292 + + ID+ + + + S + E K +R Sbjct: 232 DTELKTESRIDHIFVSPKFNVKRYGVLTNGYWTEKGSKENLSSNKAPKELKFKKYARRTP 291 Query: 293 SDHCPISIDYDF 304 SDH P+ + + Sbjct: 292 SDHYPVLVKIAY 303 >gi|242317310|ref|ZP_04816326.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|242140549|gb|EES26951.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] Length = 305 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 104/321 (32%), Gaps = 62/321 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQE 73 ++ +RL+SWN+ + G +V R D+ D++ QE Sbjct: 12 PPSNGDSTMRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQE 59 Query: 74 M-------------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKK 119 + Y +A + P + +F + + + + A+A R Sbjct: 60 LTRGFHALPGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLP 117 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 R L+ + P + + + + R A+E+ + + V+ HL+ + Sbjct: 118 VERALRHALPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVD 173 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDP 230 + L ++A + PF ++ GDFN +D + + + P Sbjct: 174 ALRRLHREAAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYRRFLAP 229 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 RF +R + K + + ++ + + D + R Sbjct: 230 FPDAPRFVDAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLS 282 Query: 291 --------RLSDHCPISIDYD 303 R SDH PI ++ Sbjct: 283 RCEIDGTVRASDHQPIVLELS 303 >gi|60729594|pir||JC7951 deoxyribonuclease I (EC 3.1.21.1) - common carp Length = 279 Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 195 ITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------PKEKDSRCNA 247 + ++ ++ GDFN +Y+ N+D + + S + C Sbjct: 172 LDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWLIPDSADTTVTHTNC-- 229 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V + K + S + + S+ L SDH P + Sbjct: 230 --------PYDRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDHFPAEVQL 278 >gi|330952069|gb|EGH52329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 291 Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 73/248 (29%), Gaps = 67/248 (27%) Query: 67 DIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 D+V LQE+ +A++ W + R + + SN + Sbjct: 83 DLVALQEVDGGSMRSGFINQVEHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLS 135 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 R + ++ P R A+ + + V+ +HL Sbjct: 136 RLRPTKIEDHPLPGPAG---------RGAILVRFGEGEDALVVVMMHLALGT-------- 178 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 ++Q +I + V+ GD N N L + L Sbjct: 179 -----RTRTRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGL 222 Query: 237 FPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ++ + R + +D+ ++ + ++ + +SDH Sbjct: 223 LAPQIEATF---PSWRPQRCLDHILLSP--------------TLTLERVQVLAQPISDHL 265 Query: 297 PISIDYDF 304 P++++ Sbjct: 266 PVAVEIRL 273 >gi|327312514|ref|YP_004327951.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944378|gb|AEA20263.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 290 Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 87/316 (27%), Gaps = 54/316 (17%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQ---EGVSLWKNSVKRTTSDYTLLRQYAK 62 + L ++ + AQ++ + ++NI + EG + + + L + Sbjct: 4 LTTLFLAMLLTCSLSAQQLYVGTYNIRYDNPNDRKEGNAWAQRCPQ--------LCDFIN 55 Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR 122 + QE+ + + + + AI RK ++ Sbjct: 56 FEQPAVFGTQEVLATQLHDLLQGLEGYDYIGVGRDDGREEGE------YAAIFYRKDLLK 109 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-------GKKIWVLDIHLKSFCFLDSLEN 175 +L L G A + GK+ + + H+ Sbjct: 110 LLDSGNFWLSQTPDHPSLGWDAACIRICTWGKFEDKTTGKQFYFFNTHM-----DHVGTV 164 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S L+ Q+ L P ++ GDFN + D+ + + L Sbjct: 165 ARRESTRLILQRIGQL--------AKSQPTILTGDFN-----VDQTDEIYGIFSRSAILR 211 Query: 236 RFPKEKDSRCNANKNL-------RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 R R+ ID+ + + I N Sbjct: 212 DCYAHARQRMAPTGTWNDFMQDSRSNARIDHVFVSSD-----FDIQHYAIFTNSYWFGKS 266 Query: 289 GKRLSDHCPISIDYDF 304 + +SDH P+ + F Sbjct: 267 RRNISDHYPVMVKLSF 282 >gi|110289481|gb|ABB47932.2| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 808 Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 32/253 (12%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L Y +DI +E+ + + + T+ I + A Sbjct: 462 ALANYLGL--SDIGCQEEIAAADMFGQKSATKTYGIL-----------EFVRDSGRVRFA 508 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 RV + +D + + + V+ +++ G I HLK+ F +LE Sbjct: 509 STSSCFRVELHRFRS-STRDLTTNSLSLFLVDYMIKSTGTLI-----HLKAS-FGPALEL 561 Query: 176 TYSPSCSLLSQQAQW---LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 + SP + QQ+ L++ K +++ GDFN I Y ++ + N Sbjct: 562 SRSPRPRVFCQQSAKQTFLRELRDTKPSDNSKWLVLGDFN--IIYKASDK---NNANINR 616 Query: 233 SLIRFPKEKDSRCNAN----KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +R KE + C +N R + + + + + Sbjct: 617 RQMRIFKETLNACELKEVALQNRRYTWSNEQDNPTLVKLDRFFCNASWNTAFERHLLHAL 676 Query: 289 GKRLSDHCPISID 301 LSDHCP+ + Sbjct: 677 STSLSDHCPLMLT 689 >gi|328873291|gb|EGG21658.1| putative sphingomyelinase [Dictyostelium fasciculatum] Length = 578 Score = 38.9 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 27/176 (15%) Query: 61 AKNLDA------DIVFLQEMGSYNAVAK---VFPKNTWCIFYSTERLINHSKRDSNNDIH 111 LD DI+ LQE+ S + + + YS + R + + Sbjct: 251 FSKLDGSILGQFDIICLQELFSAFSFRQKRFIEKAKKQNFLYSATSPLPRLLRTTFL-VD 309 Query: 112 TAIAV--RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKK----IWVLDIHLK 165 I V + V+ + D + G + +G I + HL+ Sbjct: 310 GGIVVLSKHPIVKTEYLQFKQGVDSDMLASKGALYTKIQITRDDGTPGSEYIHLFSTHLQ 369 Query: 166 SFCFLDSLE--------NTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVIAGDFN 212 + + N + S + Q L+D+I + +S P ++AGD N Sbjct: 370 ASYNPSQEQLQKGGGRDNQMNDSVRTI--QLNQLRDFIIEMTKSDSYPVILAGDLN 423 >gi|256838624|ref|ZP_05544134.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739543|gb|EEU52867.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 280 Score = 38.9 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 102/310 (32%), Gaps = 50/310 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++L F + + K+ + S+N L + V R +L+ + D Sbjct: 9 ISLFTFCIGISGQQKCKLNVGSFN---LRYDNEGDKDDSWVHRKDMAVSLVHFH----DF 61 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+ +QE G + V + +T+ + + A+ +K ++L Sbjct: 62 DVFGIQE-GLIHQVKDLVKDDTYTFVGVGRDDGKEAGEHA------AVLFKKDRFKLLDS 114 Query: 127 SYPLLGAKDSFSRAG-----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP 179 L G R ++ +GK+ + +H F + Sbjct: 115 GNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDHIGKVARHE 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSL 234 S ++ + K P + GDFN I L ++ + + + + Sbjct: 170 SALIMLANIK--------KIAGDSPAICVGDFNGTPDSEPIQILKSDGLLLDSREISKTP 221 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 ++ N N ++N+ IDY + +N + Y + G SD Sbjct: 222 PYGTVGTTNQFNLNAPMKNR--IDYIFVTKNIH---------VNKYGTLNEFQYGHYPSD 270 Query: 295 HCPISIDYDF 304 H PI I+ +F Sbjct: 271 HFPIMIEAEF 280 >gi|254447686|ref|ZP_05061152.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198263029|gb|EDY87308.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 256 Score = 38.9 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 80/273 (29%), Gaps = 77/273 (28%) Query: 65 DADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNV 121 +AD+V +QE A +VF + + D+ ++ +A+ Sbjct: 28 NADVVCIQETK-AQAHQLDDEVFHPAGY----------HRYLFDAEKKGYSGVALYA--- 73 Query: 122 RVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP-- 179 + P +R + + + +H S D + Sbjct: 74 ----KQKPDDVIYGFGEEGFDREGRYIEARFGDLSVASIYVH--SGSSGDERQQEKYRFM 127 Query: 180 --SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------- 221 L Q + +++ GD+N I + + Sbjct: 128 DFYLPKLKAQGE-----------DGRRYILCGDWN--IAHTKADIKNWRGNQKNSGFLPE 174 Query: 222 -----DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLI 271 D + + D+ +E+ S + + IDY ++ N + Sbjct: 175 ERAWLDTLFDDMQWVDAFREIEQEEHSYTWWSNRGQAWANNTGWRIDYHIVSPNLKGTVK 234 Query: 272 QESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 +Y ++ R SDH P++IDYDF Sbjct: 235 STD----IYTQE-------RFSDHAPLTIDYDF 256 >gi|21388714|dbj|BAC00811.1| DNase I [Cyprinus carpio] Length = 279 Score = 38.9 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 19/117 (16%) Query: 195 ITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------PKEKDSRCNA 247 + ++ ++ GDFN +Y+ N+D + + S + C Sbjct: 172 LDTRQRLNTNNIMLLGDFNAGCSYVSNSDWSKIRLRTDQSYTWLIPDSADTTVTHTNC-- 229 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V + K + S + + S+ L SDH P + Sbjct: 230 --------PYDRIVATSDMMKGVSAGSAQVFDFMQAHGLSQSWGLAVSDHFPAEVQL 278 >gi|282159248|gb|ADA78639.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis NE061598] Length = 258 Score = 38.9 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 88/276 (31%), Gaps = 71/276 (25%) Query: 61 AKNLDADIVFLQEMGS-----YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 K D D + +QE + + FP + + +D+ ++ A Sbjct: 20 FKTQDVDFLCMQETKAQFHQLEKDIEH-FPTGYY-----------YEFKDAVKKGYSGTA 67 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 + K + L D R ++ + + + ++L S D + Sbjct: 68 IYAKKKPLKVIKELGLDWADDEGR---------YIQFDYENFSIASLYLPSGSSGDVRQE 118 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 L + + L ++ ES F++ GDFN I + + WK+ S + Sbjct: 119 YKM---QFLEKYKEIL----KEQVESGRDFIVCGDFN--IVHKEIDIKNWKSNYGKTSGV 169 Query: 236 RFPKEK------------------DSRCNANKNLRNK---------IPIDYFVMDQNAYK 268 ++ + N+ IDY + Sbjct: 170 LPEEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKD 229 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++ ES + +Y E+ SDH P++I+YD+ Sbjct: 230 KVVPES--DYVYKENWF-------SDHAPLTINYDY 256 >gi|229124614|ref|ZP_04253799.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228658954|gb|EEL14609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] Length = 337 Score = 38.9 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 107/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 35 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 94 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 95 LQEVD-IKSM-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGL 149 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 150 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 206 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 207 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 259 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 260 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 310 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 311 EIVNVQGKDLKFEN---SDHNPVS 331 >gi|196032800|ref|ZP_03100213.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] gi|195994229|gb|EDX58184.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] Length = 352 Score = 38.9 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 107/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 110 LQEVD-IKSM-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 221 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 222 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 274 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 325 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 326 EIVNVQGKDLKFEN---SDHNPVS 346 >gi|325917489|ref|ZP_08179695.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325536283|gb|EGD08073.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 259 Score = 38.9 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 49/208 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ + L+Q+ + D+V +QE Sbjct: 1 MKIASWNVNSLNVR----------------LPHLQQWLTDFAPDVVGIQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 + + + + +A+ + + Q P A Sbjct: 37 --LEDHKFPDAALAALGYRSVFCGQKTYNGVAILSRAPALDVQMGIPGFDDVQQRVIAAT 94 Query: 143 RRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + L +NG+ + D + + DWI Q+ + Sbjct: 95 VDGVRIINLYVVNGQDV-----------GTDKYAYKLRW--------LEAVHDWIAQELQ 135 Query: 201 SLVPFVIAGDFNRKINYLGNNDD-FWKT 227 V+ GDFN + +D W Sbjct: 136 RHPQLVVLGDFNIAPDARDVHDPVVWNE 163 >gi|218906273|ref|YP_002454107.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] gi|218538717|gb|ACK91115.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] Length = 352 Score = 38.9 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 107/324 (33%), Gaps = 70/324 (21%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEVNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT----------------AI 114 LQE+ ++ + F N ++ + + + T + Sbjct: 110 LQEVD-IKSM-RSFDVNGHEFL---KKGLPNYVSSFGKNYDTKWVPVPITSPMGYAEAGL 164 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLD 171 + K + + L G + R +R VE + NGK + ++++HL + D Sbjct: 165 STFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVNNGKHVRLVNLHLSA---YD 221 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN 231 QQ ++LK ++ + E ++ GD+N+ ++ + +D + P+ Sbjct: 222 EGGKIR-------KQQVEYLKAYMNKHYEKGDYVIMGGDWNQLVSDVQLSDPKFVKERPD 274 Query: 232 DSLIRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESF 275 + D K ID F++ N Sbjct: 275 WLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------V 325 Query: 276 SEILYNEDDIKSRGKRLSDHCPIS 299 + D+K SDH P+S Sbjct: 326 EIVNVQGKDLKFEN---SDHNPVS 346 >gi|115396906|ref|XP_001214092.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193661|gb|EAU35361.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 426 Score = 38.9 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 86/300 (28%), Gaps = 36/300 (12%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + + P A+ + + ++S+N+ L E + + + D++ Sbjct: 7 LAGISPALAASSGQFNVLSFNVAGLPEIFNSNEVPGDKSTNS---EQIGTKFAEYGYDVI 63 Query: 70 FLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 +QE N Y T+ + I + + V + Sbjct: 64 HVQE-----------DFNYHAYIYKTDNHPYRTATSGGAGIGSGLNTLANYPWVDFERVK 112 Query: 130 -----LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 D + G + G + ++H + D + + Sbjct: 113 WATCSDASGADCLTPKG--FTAMRVRFDEGFYVDFYNLHADAGSETDDVSARSAN----- 165 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 Q L D+I + P ++ GD N + G N ++T + + P Sbjct: 166 ---LQQLADYIDT-NSAGNPVMVFGDTNARYTSAGENIRVFETQEGMSN----PAPTRGS 217 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R +D + L + S G LSDH PIS + + Sbjct: 218 ARIPRRTRTCETVDKIFYRGSRAVDLKA--VYWDYVGTKFLSSNGTILSDHNPISSNITW 275 >gi|253563360|ref|ZP_04840817.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947136|gb|EES87418.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 285 Score = 38.9 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + L C+++ VR+ ++NI + + ++ WK + ++ + Sbjct: 10 VFITLLLAGCSSNPISHVRVATFNIRYDNLGDSLNSWKYRK-------EKVCEFIREKHP 62 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D++ +QE+ ++ + + + + RK +L Sbjct: 63 DVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDS 116 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 +P K + A R A ++ GK+ +L+ H F Sbjct: 117 NTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTEARR 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + D I + P ++ GDFN + + ++ + Sbjct: 172 NS-------ALLIIDKIKE-IAGTHPAMMTGDFN------VSEEWEAYKTITSNEFVLKD 217 Query: 239 KEKDSRCNANKNLRN----------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 K + + +N + ID+ + A +I + ++ Y Sbjct: 218 AWKIAGKQSGENYTFHDFGRVPVAEREKIDFIFVTPQIKVADAEIISSAITDSTY----- 272 Query: 286 KSRGKRLSDH 295 LSDH Sbjct: 273 ------LSDH 276 >gi|227494748|ref|ZP_03925064.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] gi|226831748|gb|EEH64131.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] Length = 273 Score = 38.9 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 78/282 (27%), Gaps = 66/282 (23%) Query: 57 LRQYAKNLDADIVFLQEM-GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + D++ LQE+ + +A + ++ ++N+S A+ Sbjct: 21 MASVLAETAPDVLALQEVRANDKILADLMGEDW--------EMVNYSCEIKGRAG-VAVL 71 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSL 173 VR+ + L GA + + +E+ V + + V+ +L S Sbjct: 72 VRRSSHVELLADSARFGAPEGGDKVPVDTGRWLEVDVVDGDRTVTVISAYLHSGELGTEK 131 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------------RKINYLG 219 + + + + + + S V+ GD N + Sbjct: 132 MDQK-------YAHLKLVTERMAEIVASGKHAVVVGDLNIVRSEKDIKNWKGNHNKSAGV 184 Query: 220 NNDDF----------WKTID-------PNDSLIRFPKEKDSRCNANKNLRNK--IPIDYF 260 +++ W I + K+ N IDY Sbjct: 185 MDEEIAYVDGWMSSGWTDISRQLHGAEQQGPYTWWS-------WRGKSFDNDAGWRIDYQ 237 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + D + KR SDH P+ + Y Sbjct: 238 LATAELAATATSC-------VVDRADAYEKRFSDHAPLRVHY 272 >gi|53712613|ref|YP_098605.1| hypothetical protein BF1322 [Bacteroides fragilis YCH46] gi|52215478|dbj|BAD48071.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 285 Score = 38.9 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + L C+++ VR+ ++NI + + ++ WK + ++ + Sbjct: 10 VFITLLLAGCSSNPITHVRVATFNIRYDNLGDSLNSWKYRK-------EKVCEFIREKHP 62 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D++ +QE+ ++ + + + + RK +L Sbjct: 63 DVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDS 116 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 +P K + A R A ++ GK+ +L+ H F Sbjct: 117 NTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTEARR 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + D I + P ++ GDFN + + ++ + Sbjct: 172 NS-------ALLIIDKIKE-IAGTHPAMMTGDFN------VSEEWEAYKTITSNEFVLKD 217 Query: 239 KEKDSRCNANKNLRN----------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 K + + +N + ID+ + A +I + ++ Y Sbjct: 218 AWKIAGKQSGENYTFHDFGRVPVAEREKIDFIFVTPQIKVADAEIISSAITDSTY----- 272 Query: 286 KSRGKRLSDH 295 LSDH Sbjct: 273 ------LSDH 276 >gi|282878202|ref|ZP_06286998.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299620|gb|EFA91993.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 305 Score = 38.9 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 27/132 (20%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 I + S P ++ GDFN + +D+ ++ + L R N + Sbjct: 177 IKEIAGSNAPVILTGDFN-----VDQHDEIYQIFTQSGLLKDSYTAARMRFAENGTFQGF 231 Query: 253 -----NKIPIDYFVMDQ----NAYKFLIQE----------SFSEILYNEDDIKSRGKRL- 292 ID+ + N Y L S E + + RL Sbjct: 232 KSSLLTDSRIDHVFVSNKFQVNQYGILTNGYWTEGTSREVSKEGAAPQELNFRQYVHRLP 291 Query: 293 SDHCPISIDYDF 304 SDH P+ + ++ Sbjct: 292 SDHYPVMVKLNY 303 >gi|310286996|ref|YP_003938254.1| Conserved hypothetical membrane spanning protein with endonuclease/exonuclease/phosphatase family domain [Bifidobacterium bifidum S17] gi|309250932|gb|ADO52680.1| Conserved hypothetical membrane spanning protein with endonuclease/exonuclease/phosphatase family domain [Bifidobacterium bifidum S17] Length = 309 Score = 38.9 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 56/225 (24%), Gaps = 46/225 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMG-------SYNAVAKVFPKNTWCIFYSTERLINHSK 103 +D + ++ +++ LQE + P + S++ + Sbjct: 97 HADAKAIVDIVRDQRVEVLALQETTNDFVKKLDEAGIHSYLP---YSQVSSSDGVCG--- 150 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + P+ + S A + ++ + +H Sbjct: 151 --------------NGIWSATELGRPVDD--EVGSSASFMPGGTVTFGGGKAQLRFVSVH 194 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + S L + + + +V GDFN ++ + Sbjct: 195 TTAPIPGYWSRWKRS------------LDELASMRSREGSRYVFMGDFNATTDHTPFRNI 242 Query: 224 FWKTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 S F S ID+ V+D++ Sbjct: 243 LGNRFSDAARQSGHGFTFTWPSNKLPLPRF---AGIDHIVLDKDI 284 >gi|83718560|ref|YP_442749.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|257138960|ref|ZP_05587222.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|83652385|gb|ABC36448.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia thailandensis E264] Length = 286 Score = 38.9 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 43/214 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +RL+SWNI + G ++ R D+ D++ +QE+ Sbjct: 1 MRLISWNIQWGRDANGTVDLARTIDAARGLGDF------------DVLCMQEVTRGFHAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQS 127 Y +A + P + +F + + + A+A R R ++ + Sbjct: 49 PGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLGPGAPRRQFGNALATRLPVERAMRHA 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + + R A+E+ + + V+ HL+ + + L ++ Sbjct: 107 LPWPAS--AAAPSMPRCALEVTLRAPFGPLRVIVTHLEY--YSAQQRLAQVDALRRLHRE 162 Query: 188 AQWLKDWITQKKESLVPF---------VIAGDFN 212 A + PF ++ GDFN Sbjct: 163 AAAHARASAPPETPTGPFAPSARAADAIVCGDFN 196 >gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group] Length = 1102 Score = 38.9 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 20/108 (18%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNKI 255 + S +P+++ GDFN + ++ P +N ++ Sbjct: 559 RNSSNLPWLVIGDFNEAL-------WQFEHFSSHPRGEPQMGTPFTYDNKRQGRN-NVRV 610 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + D + + SDHCPIS+ Sbjct: 611 RLDRAIADNAWRD----------TFPNATLAHLASPRSDHCPISLQLS 648 >gi|289207257|ref|YP_003459323.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] gi|288942888|gb|ADC70587.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] Length = 257 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 88/269 (32%), Gaps = 65/269 (24%) Query: 63 NLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---RKK 119 +AD+V +QE + + ++ + + + D+ ++ +A+ R+ Sbjct: 25 KTEADVVCIQE--TKAQIHQIQGEPF------HPPGYHSAYVDAVKPGYSGVALYSRRQP 76 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 + + + + + + R + V+ ++L S D +++ Sbjct: 77 DEVITRIGFEEADNEGRYVE--MRFG----------DLSVVSLYLPSGSSGDHRQDSK-- 122 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKINYLGNN---------- 221 + + + W+ ++ + +VI GD+N R N Sbjct: 123 -----WRFLDFFRPWLAERMQDGREWVICGDWNIAHKEIDLRNWKSNQKNSGFLPEERAW 177 Query: 222 -DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESF 275 D + I D R + + + IDY + I E+ Sbjct: 178 LDHLFDEIGMVDVFRRLDDRPEQYTWWSNRGQAWAKNVGWRIDYQIATPG-----IAETA 232 Query: 276 SEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + DD R SDH P IDYD+ Sbjct: 233 RDPYIHTDD------RYSDHAPFWIDYDY 255 >gi|254509579|ref|ZP_05121646.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533290|gb|EEE36278.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 236 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 30/152 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG--- 75 + + +RL S+NI ++R + Q ++L ADIV LQE Sbjct: 4 TQSSTLRLASYNIQ--------KCVGLDLRRQP---QRILQVIESLQADIVVLQEADKRL 52 Query: 76 --SYNAV-AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A+ + + W I N I A+ V Q + L Sbjct: 53 PPRPAALPHFMLDEAGWQIV--DLGGAGSLGWHGNAVIWRGDAI-----EVRQTGHHDLP 105 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 + R AV + + + V+ +HL Sbjct: 106 GLE------PRGAVRVEFDTQIGPLRVMGMHL 131 >gi|77456279|ref|YP_345784.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77380282|gb|ABA71795.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 84/287 (29%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----------MGSY 77 SW L G S + D+ D+V LQE + Sbjct: 56 SW--QHLLPHPGRSSNLQKIGNLLGDF------------DLVALQEADGGSLRSGYVNQV 101 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN V + + +PL G Sbjct: 102 EHLAQLGAFPYW--YQQLNRNLGRLAQHSN-------GVLSRLRPWAIEDHPLPGP---- 148 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + + V+ +HL + S++ Y I + Sbjct: 149 ---KGRGAILVRFGEGPEALVVVMMHLALGARVRSMQLAY-----------------IRE 188 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N + L + L + ++ + R + + Sbjct: 189 LIGGYKHQVLMGDMNTHASDLLQHSPL-------RDLGLLAPQLEATF---PSWRPQRCL 238 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 239 DHILLSP--------------TLTLEKVEVLAQPISDHLPVAVEIRL 271 >gi|16799425|ref|NP_469693.1| hypothetical protein lin0348 [Listeria innocua Clip11262] gi|16412777|emb|CAC95581.1| lin0348 [Listeria innocua Clip11262] Length = 257 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 29/159 (18%) Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 +G++ ++ + HL D + S L Q L +P ++ GD Sbjct: 122 STDGRQFYIFNTHL------DHVSEEARLFASQLLLQKAGL-------IAENLPVILLGD 168 Query: 211 FNR-----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 FN N++ + I + I+ P + IDY + Sbjct: 169 FNTEPETPTYNFITKKYQDAQLISQ--TPIKGPIGSFHDFQPLRPENELEKIDYIFVS-- 224 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ ++ Sbjct: 225 -------KEFRVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|291523682|emb|CBK81975.1| Endonuclease/Exonuclease/phosphatase family [Coprococcus catus GD/7] Length = 365 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 91/268 (33%), Gaps = 37/268 (13%) Query: 61 AKNLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLI---NHSKRDSN 107 A +L+ D ++E + Y+ + FP + + + + ++ + Sbjct: 110 AASLNPDFAMIEEIDLDSTRSYHVNEYDILRNCFPNDYYVFAQNYDSAFLFYPFTQPHGS 169 Query: 108 NDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 + + + L++S P+ + F ++ + NGK++ + +H+ + Sbjct: 170 SKSGIGLFSKYPVTSALRRSLPISTSFSKFLDLDRCYSISRVPVDNGKELVIFALHMSA- 228 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND---DF 224 S + Q L + ++ E + GDFN + ++ + Sbjct: 229 -------YGNSDAIR--EGQIAMLSADMQKEYEVGNYVLCGGDFNHDLKASDGDEEEHES 279 Query: 225 WKTIDPNDSLI--------RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 W P ++L +E+ + + + + F++ ++ Sbjct: 280 WAYPFPREALPEHFSFCIDALSEEERNAMWNSARNADMAYVPDVTYTVTLDGFIVSDNIE 339 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y D G SDH P+ +++ Sbjct: 340 CLTYENVDT---GYSYSDHDPVYMEFKL 364 >gi|163942794|ref|YP_001647678.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|229014262|ref|ZP_04171382.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|229135910|ref|ZP_04264673.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|163864991|gb|ABY46050.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|228647552|gb|EEL03624.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228747039|gb|EEL96922.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 352 Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 38/164 (23%) Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NGK + ++++HL + D QQ ++LK+++ + ++ ++ GD+ Sbjct: 205 NNGKFVRLVNLHLSA---YDEGGKIR-------KQQVEYLKEYMNKHYKNGDYVIMGGDW 254 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKI 255 N+ I+ +D + P + D K Sbjct: 255 NQLISNAQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVT 314 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F++ N + D+K SDH P+S Sbjct: 315 IIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|171676121|ref|XP_001903014.1| hypothetical protein [Podospora anserina S mat+] gi|170936126|emb|CAP60786.1| unnamed protein product [Podospora anserina S mat+] Length = 645 Score = 38.9 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 17/59 (28%), Gaps = 14/59 (23%) Query: 240 EKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + C IDY + + I + E L SDHCP+ Sbjct: 273 DTRKNCRPG---NFGSRIDYVLCSSGIKDWFIDANIQEGLLG-----------SDHCPV 317 >gi|239945332|ref|ZP_04697269.1| putative exonuclease [Streptomyces roseosporus NRRL 15998] gi|239991789|ref|ZP_04712453.1| putative exonuclease [Streptomyces roseosporus NRRL 11379] gi|291448794|ref|ZP_06588184.1| exonuclease [Streptomyces roseosporus NRRL 15998] gi|291351741|gb|EFE78645.1| exonuclease [Streptomyces roseosporus NRRL 15998] Length = 259 Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 54/297 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ ++N+N+++ + L + ++ D++ +QE A+ Sbjct: 1 MRIATYNVNSITAR----------------LPRLLAWLESSGTDVLCIQET---KCTAEQ 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 FP R + + +A+ + + L G + R Sbjct: 42 FPA-------EALREAGYESAVNATGRWNGVALLSRVGLTDVVTG-LPGGPEYDGVQEPR 93 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + + + +++ + ++ Y + + L+ + + Sbjct: 94 A-----ISATCGPLRLWSVYVPNGREVEHEHYAYK------LRWLEALRKAVAADAAGSL 142 Query: 204 PFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID--YF 260 PF + GDFN D ++ R ++ + D Y Sbjct: 143 PFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAALAALEAEGLSEVHPRPLKYDRAYT 202 Query: 261 VMD------QNAYKFLIQESFSEILYNEDDIKSRGKR-------LSDHCPISIDYDF 304 D I +F + S R SDH P+ +D D Sbjct: 203 FWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDREERKGKGASDHAPVVVDLDL 259 >gi|47567314|ref|ZP_00238027.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] gi|47555935|gb|EAL14273.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] Length = 327 Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 39/174 (22%) Query: 143 RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R VE + NGK + ++++HL + D QQ ++LK+++ + ++ Sbjct: 170 RAIVEHTIPVNNGKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKN 219 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------AN 248 ++ GD+N+ ++ +D + P + D Sbjct: 220 GDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVK 279 Query: 249 KN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 K ID F++ N + D+K SDH P+S Sbjct: 280 KYVEGENFVTIIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 321 >gi|332705691|ref|ZP_08425767.1| putative extracellular nuclease [Lyngbya majuscula 3L] gi|332355483|gb|EGJ34947.1| putative extracellular nuclease [Lyngbya majuscula 3L] Length = 328 Score = 38.9 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 92/276 (33%), Gaps = 41/276 (14%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL--LRQYAKNLDADIVFLQEMGSYNAVAK 82 ++ ++N+ L + + K +T + + K + ADIV QE+ A+ + Sbjct: 7 KVGTFNLCNLVLPDVLYYRKKIYTQTEYALKTTWIAEQLKKMKADIVGFQEVFHKEALQQ 66 Query: 83 VFPKNTWCIFYSTERL-INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS--- 138 ++ ++ + + N + + + + V + + +P D Sbjct: 67 ALAQS--QVYDNATTVFANPTGKSPVVALTSRFPV---LEYNVIKDFPTTACLDIQGTDI 121 Query: 139 --RAGNRRAVELLVEINGK-KIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD-- 193 + +R +E ++++ V IHLKS + + QA+ L Sbjct: 122 PLKRFSRPVLEAHLKLSDTIDCTVFVIHLKSKRPIIPDGVDRNDPIEQAKGQARSLILRA 181 Query: 194 ---------WITQKKESLVPFVIAGDFNRK--------INYLGNNDDFWKTIDPN--DSL 234 + + + P ++ GD N ++ W D L Sbjct: 182 AEATALRVILMDKLQHRDHPVIVMGDVNDSGLAITSQIVSGEPPLRKLWFQQKQIIWDVL 241 Query: 235 IRFPKEKDSRCNANKNLR------NKIPIDYFVMDQ 264 + + K+ +R N + +D+ ++ Q Sbjct: 242 LYYVKDIQARQNYGDFYYTHIHNGHHESLDHILVSQ 277 >gi|49474726|ref|YP_032768.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49240230|emb|CAF26700.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 269 Score = 38.9 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 80/312 (25%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD---ADIVFLQEMGSYNAV- 80 R+ +WN+N++ L Q + LD AD++ LQE +A+ Sbjct: 4 RIATWNVNSIRL-------------------RLAQVFQYLDLFAADVLCLQETKCPDALF 44 Query: 81 -AKVFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + I S ++ + +A+ V + + + + Sbjct: 45 PREAFEAAGYKHIILSGQKS------------YNGVAI------VSRLPFKNVEKRFFCQ 86 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW--IT 196 + R + ++VE G+ I + + ++ + D + + + +L++ I Sbjct: 87 KQDCRY-ISVIVEAYGRNIRIHNFYVPAG--GDVPDADVNE---KFRHKLDFLEEMASIR 140 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFW---KTIDPNDSLIRFPKEKDSRC-------- 245 +E + ++ GD +N DD W + + + + C Sbjct: 141 ANQEDDLASLLVGD----LNIAPLEDDVWSHQQLLKVVSHTPIETERLQALCCQGGWVDL 196 Query: 246 ---------NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RL 292 + D+ + D+ I S + + + R + Sbjct: 197 MRLHFPPPTKIYTWWSYRAR-DWALADRGRRLDHIWSSPNLAPFVANLSIFRDARGWNQP 255 Query: 293 SDHCPISIDYDF 304 SDH P+ +DF Sbjct: 256 SDHVPVQTVFDF 267 >gi|332305999|ref|YP_004433850.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173328|gb|AEE22582.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5] Length = 269 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 78/288 (27%), Gaps = 78/288 (27%) Query: 56 LLRQYAKNLDADIVFLQE---------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDS 106 L+ DI+ LQE + A+ + +++ ++ Sbjct: 17 QLKALIDKHQPDIIGLQEIKVHNDMFPVADVEAM-------GYKVYFHGQKA-------- 61 Query: 107 NNDIHTAIAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHL 164 H +A+ K+ +Q +P + RR + + NG+ + VL+ Sbjct: 62 ----HYGVAMLCKEEPSDVQYGFP------TDDEDAQRRMIMVSYPMPNGETVRVLN--- 108 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RK---INYLG 219 F ++ + + L ++ V+ GD N I Sbjct: 109 --GYFPQGENRSHETKFPAKRKYYEDLSTYLNTHHTPDENVVVMGDVNISHTDLDIGIGE 166 Query: 220 NNDDFWKTIDP-----------NDSLIRFPKEKDSRCNANKNLRNKIP------------ 256 N W ND + + N N Sbjct: 167 PNRKRWLQTGKCSFLPEERLWLNDLIDWGFSDGFRTLNPETNEHFSWFDYRSKGFLDNRG 226 Query: 257 --IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ID + + ++ L D ++ SDH PI +Y Sbjct: 227 LRIDLILATKKLHESLSDAGI-------DYELRGIEKPSDHAPIWAEY 267 >gi|301311968|ref|ZP_07217890.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3] gi|300830070|gb|EFK60718.1| Ser/Thr protein phosphatase family protein [Bacteroides sp. 20_3] Length = 644 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 M R V A ++ AQK + S N+L ++ DY + Sbjct: 24 MKRSVVFAACLWVSCLFTLSAQKTTIESKEENSLRVM-SYNVRNCRGMDEVVDYQRVADI 82 Query: 61 AKNLDADIVFLQEMGSY 77 +D D++ +QE+ S Sbjct: 83 MNRVDPDVIAVQELDSA 99 >gi|229099528|ref|ZP_04230456.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|229118593|ref|ZP_04247945.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228664785|gb|EEL20275.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228683824|gb|EEL37774.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 352 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 104/315 (33%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T ++ + + +N ++D LQE+ Sbjct: 56 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFALLQEVD- 114 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------------AIAVRKKNVRV 123 ++ + F N S + + ++ K Sbjct: 115 IKSM-RSFDINGHEFLKKGLPDYASSFGKNYDTKWVPVPITSPMGYADAGLSTFSKYTVQ 173 Query: 124 LQQSYPLLGAKDSFSR--AGNRRAVELLVEINGKK-IWVLDIHLKSFCFLDSLENTYSPS 180 + + L G + R +R VE + +N K + ++++HL + D Sbjct: 174 TAKRFQLPGMEPWPKRLFDLDRAIVEHKIPVNNGKFVRLVNLHLSA---YDEGGKIR--- 227 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQ ++LK+++ + ++ ++ GD+N+ I+ + +D + P + Sbjct: 228 ----KQQVEYLKEYMNKHYKNGDYVIMGGDWNQLISNVQLSDPKFVKERPEWLVELPKDF 283 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D K ID F++ N + D Sbjct: 284 TDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 334 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 335 LKFEN---SDHNPVS 346 >gi|220933285|ref|YP_002512184.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] gi|219994595|gb|ACL71197.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] Length = 294 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 73/239 (30%), Gaps = 49/239 (20%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+V LQE+ + + ++ + S + + +N ++ + + ++ +L + Sbjct: 88 DLVGLQELDAGSLRSQFINLAQY---LSERSDLPYWYSQTNRNLGK---IAQHSLGLLSR 141 Query: 127 SYPLLGAKDSFSR-AGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 +P + R A+E E + ++ +HL Sbjct: 142 YHPHTVVEHRLPSVIPGRGALEAHFGAEQGSGSLVIMLVHLSLG---------------- 185 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 + + ++I + V+ GD N + D+ K + L + Sbjct: 186 -KRDRRLQMEYIAEVLRDHEHVVVMGDMN----CSCHADEV-KRLVRQTRLQEPLAAHKT 239 Query: 244 RCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + R D+ ++ + + SDH P+ ++ Sbjct: 240 ----YPSWRPAHAFDHILVTPG--------------LGVEQVHVYNVNYSDHLPVGVEI 280 >gi|116511761|ref|YP_808977.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|116107415|gb|ABJ72555.1| Metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] Length = 352 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 35/169 (20%) Query: 148 LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI 207 L ++ + KK + + HL +F ++ QQ L D + K + +VI Sbjct: 205 LPIKNSDKKFVIFNTHLSAFITDQKIQ----------KQQLVTLFDAMK-KYVNKGDYVI 253 Query: 208 AG-DFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIP------- 256 G D+N + + + W P ++L R ++ + + Sbjct: 254 CGADYNHALAGKAHPELTWMKEFPTENLTKGMRVVAPTNAPTVRSLDFAYHQKNPKNTFG 313 Query: 257 -IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID F++ N I + SDH P+ +D+ Sbjct: 314 IIDGFLVSNNIKDLKI------------QTIDNQFKSSDHQPVLMDFSL 350 >gi|260820545|ref|XP_002605595.1| hypothetical protein BRAFLDRAFT_94294 [Branchiostoma floridae] gi|229290929|gb|EEN61605.1| hypothetical protein BRAFLDRAFT_94294 [Branchiostoma floridae] Length = 278 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 43/227 (18%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 LA V + +++ ++N+ T + K V +L Q A+ Sbjct: 5 LAFFALGVLALSGACSALKIGAFNVQTF---GRTKMSKPDV------VEILLQIAERY-- 53 Query: 67 DIVFLQEMGSYN--AVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 DI+ +QE+ A+ N + + S R + + + A R Sbjct: 54 DILLIQEIRDSTFTAIYSFLDQLNARRGNDYSMVLSDR-----LGRSTYMEQY-AFLWRN 107 Query: 119 KNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 VL Y +D F+R R V + ++ +H + S Sbjct: 108 DRDLVLAGDYHYEDPEDIFAREPYIVRFMSGNTVTDD---FVLIPMH-----AVPSDAVA 159 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + + Q + W + +I GD N +Y+G +D Sbjct: 160 ENNELFTVYQ--DVVSRW------GVQNVIIMGDLNADCSYVGASDW 198 >gi|254427925|ref|ZP_05041632.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196194094|gb|EDX89053.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 310 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 33/241 (13%) Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNND---IHTAIAVRKKN-- 120 ++ LQE+ + + ++ + S S ND + AI R Sbjct: 83 PHVLALQEVENQAVLDRLADR------LSQRGYRYRSALREGNDPSGMDVAIMYRSPVNI 136 Query: 121 -VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 S ++R A+E + N V+ +H +S L Sbjct: 137 GSVSTLFSGQQFHGHALYARPPLVVALEAPLAAN-----VVVVHWRSARNLKKAWVHEKR 191 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPNDSLIRF 237 QA L +W+T + P ++AGDFN + +D + ++ + Sbjct: 192 -----QTQAALLANWVTMQTS---PLIVAGDFNTTWDEGRFSDSHERFEQSGLLNLWSFL 243 Query: 238 PKEKDSRCNANKNLRNKIPIDYFVMDQN---AYKFLIQESFSEILYNEDDIKSRGKRLSD 294 P+++ + +D+ + + + + Y+ +SD Sbjct: 244 PEKERYSFRHRCRPQ---ALDHIWVSPGLKPSVSKVAVSRGNAGRYDSLYGSQGVAPISD 300 Query: 295 H 295 H Sbjct: 301 H 301 >gi|115933321|ref|XP_780987.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115949269|ref|XP_001188462.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 442 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 33/156 (21%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDAD--IVFLQEMGSY--N 78 ++ + +WN V++ + D ++ D I LQE+ S Sbjct: 5 RICVSTWN---------VAIQEPPPIEAFKDIIWIQ---TQNAPDMYIWGLQEVSSKPHE 52 Query: 79 AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + W S+ ++ + + V +L P L + Sbjct: 53 FIQSAFSDDPWTEVISSIVCPKGYVMINSVRL-------QGLVILLYVRMPHLPFIHNVQ 105 Query: 139 RAGNRRAV--------ELLVEIN--GKKIWVLDIHL 164 A R + + + + G+ I +L++HL Sbjct: 106 TALTRTGLGGVWGNKGAVTIRFDCYGRSICLLNVHL 141 >gi|109898960|ref|YP_662215.1| exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] gi|109701241|gb|ABG41161.1| Exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] Length = 269 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 75/275 (27%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ DI+ LQE+ + + + + + ++ H +A Sbjct: 17 QLQALIDKHQPDIIGLQEIK--------VHNDMFPV--ADVEAMGYNVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSL 173 + KK +Q +P + RR + + NG+ + VL+ F Sbjct: 67 MLCKKEPTDVQYGFP------TDDEDAQRRMIMVSYPMPNGETVRVLN-----GYFPQGE 115 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--RK---INYLGNNDDFWKTI 228 ++ + + L ++ ++ GD N I N W Sbjct: 116 NRSHETKFPAKRKYYEDLSTYLNTHHTPDDNVIVMGDVNISHTDLDIGIGEPNRKRWLQT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 ND + + N N ID + Sbjct: 176 GKCSFLPEERVWLNDLIDWGFTDGFRTLNPETNEHFSWFDYRSKGFLDNRGLRIDLILAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ L D ++ SDH PI Sbjct: 236 KKLHESLTDAGI-------DYELRGIEKPSDHAPI 263 >gi|332526767|ref|ZP_08402869.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus JA2] gi|332111170|gb|EGJ11202.1| extracellular nuclease-like protein [Rubrivivax benzoatilyticus JA2] Length = 931 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 28/205 (13%) Query: 37 QEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYS 94 + SL + +R + + LDAD+V L E+ AV + + Sbjct: 515 RGANSLAEFQRQR-----AKIVEALAALDADVVGLMEIQNNGVVAVQNLVDALNLRVGSG 569 Query: 95 TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING 154 T + + +D + K R+ + P SR + NG Sbjct: 570 TYAALPEPAAGTGSDAIKVAMIYKP-SRLTRVGAPASDTAAVNSRPPLAQTFA---PANG 625 Query: 155 KKIWVLDIHLKS--FCFLDSLENT-------YSPSC--SLLSQQAQWLKDWITQKKESL- 202 ++ V+ HLKS C + C +L QA+ L+ ++ Q + + Sbjct: 626 ERFTVVVNHLKSKSSCPAAGDADAPGNVDSGDGQGCWNALRVAQAEQLRRFVAQLQAASG 685 Query: 203 -VPFVIAGDFNRKINYLGNNDDFWK 226 ++ GDFN D ++ Sbjct: 686 SHDVLLVGDFN----AYAQEDPVFQ 706 >gi|229193352|ref|ZP_04320302.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228590153|gb|EEK48022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 352 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 101/315 (32%), Gaps = 64/315 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 ++ ++NI + + + ++T ++ + + +N ++D LQE+ Sbjct: 56 KVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFALLQEVD- 114 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR------------VL 124 ++ + F N S + + + + V Sbjct: 115 IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTFSKYTVQ 173 Query: 125 QQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYSPS 180 + L + + + R VE + NGK + ++++HL + D Sbjct: 174 EAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGGKIR--- 227 Query: 181 CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKE 240 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 228 ----KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLVELPKDF 283 Query: 241 KDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 D K ID F++ N + D Sbjct: 284 TDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIVNVQGKD 334 Query: 285 IKSRGKRLSDHCPIS 299 +K SDH P+S Sbjct: 335 LKFEN---SDHNPVS 346 >gi|28867571|ref|NP_790190.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971019|ref|ZP_03399140.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|301385582|ref|ZP_07234000.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302058834|ref|ZP_07250375.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] gi|302132137|ref|ZP_07258127.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850806|gb|AAO53885.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924255|gb|EEB57829.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 291 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 47/240 (19%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D+V LQE+ ++ F + +L + + + N + Sbjct: 81 DFDLVALQEVDG-GSMRSGFVNQVEHLA----QLGGFPFWYQQLNRNLGRFAQHSNGVLS 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P R A+ + + V+ +HL Sbjct: 136 RLR-PTKIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGT-------------RTR 181 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q +I + V+ GD N N L + L + ++ Sbjct: 182 TRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEAT 230 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R + +D+ ++ + ++ +SDH P++++ Sbjct: 231 F---PSWRPQRCLDHILLSP--------------TLTLERVQVLAHPISDHLPVAVEIRL 273 >gi|311894312|dbj|BAJ26720.1| hypothetical protein KSE_08830 [Kitasatospora setae KM-6054] Length = 325 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 14/100 (14%) Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSL 173 R +R Q + D +S G A +++NG+ V+ HL+S C Sbjct: 136 RWPILRKEQYVFKDACGSDRWSNKGFAYA---EIDVNGQLTHVVGTHLQSTDPGCASGQA 192 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFN 212 + ++Q + ++ ++ + + P V+AGD N Sbjct: 193 ADVR-------ARQLRAVRAFLDAKRIPAGEPVVLAGDLN 225 >gi|331014877|gb|EGH94933.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 291 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 47/240 (19%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D D+V LQE+ ++ F + +L + + + N + Sbjct: 81 DFDLVALQEVDG-GSMRSGFVNQVEHLA----QLGGFPFWYQQLNRNLGRFAQHSNGVLS 135 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + P R A+ + + V+ +HL Sbjct: 136 RLR-PTKIEDHPLPGPAGRGAILVRFGEGEDALVVVMMHLALGT-------------RTR 181 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++Q +I + V+ GD N N L + L + ++ Sbjct: 182 TRQL----AYIRELIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEAT 230 Query: 245 CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + R + +D+ ++ + ++ +SDH P++++ Sbjct: 231 F---PSWRPQRCLDHILLSP--------------TLTLERVQVLAHPISDHLPVAVEIRL 273 >gi|313620750|gb|EFR92007.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL S4-378] Length = 257 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 29/159 (18%) Query: 151 EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGD 210 +G++ ++ + HL D + S L Q L +P ++ GD Sbjct: 122 STDGRQFYIFNTHL------DHVSEEARLFASQLLLQKAGL-------IAENLPVILLGD 168 Query: 211 FNR-----KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 FN N++ + I + I+ P + IDY + Sbjct: 169 FNTEPETPTYNFITKKYQDAQLISQ--TPIKGPIGSFHDFQPLRPENELEKIDYIFVS-- 224 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + F Y + G SDH P++ ++ Sbjct: 225 -------KEFRVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|170701595|ref|ZP_02892542.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170133507|gb|EDT01888.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 269 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 87/290 (30%), Gaps = 68/290 (23%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P A + +R+ ++NI + R + Q LDAD++ LQE+ Sbjct: 20 PPAAPGGRDLRIATYNIR----GGYGKWHTRAAHR-------IAQVIHELDADVIALQEV 68 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYP 129 ++ H + + + R N + + Sbjct: 69 P--------LGGT------HAPDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIR 114 Query: 130 LLGAKDS-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 D F + R A++ ++ + I V+ HL L + + Q Sbjct: 115 AARTLDLSFHQREPRGALDADIDCSAGMIRVVATHL-------GLSASERSA------QV 161 Query: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNAN 248 Q L +P ++ GD N + F + + RF + R Sbjct: 162 QRLLAAFDT---GAMPVILMGDIN---------EWFVRGRALQALVTRFRRAPAPRTFPT 209 Query: 249 KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +D + ++L+ + + R +R SDH P+ Sbjct: 210 LYPVFS--LDRIWIHPG--EWLVDVNVHRSM--------RARRASDHYPL 247 >gi|71989663|ref|NP_504373.2| hypothetical protein F14F9.5 [Caenorhabditis elegans] gi|75022238|sp|Q9GUC9|YFEF9_CAEEL RecName: Full=Uncharacterized protein F14F9.5; Flags: Precursor gi|33620952|gb|AAF98622.2| Hypothetical protein F14F9.5 [Caenorhabditis elegans] Length = 314 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 101/334 (30%), Gaps = 100/334 (29%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 +RL+++NI G ++ + ++ ++ D+V LQE+ Y V + Sbjct: 27 IRLMTFNI-W---NSGANVENGQ--------QKIAKHILMVNPDVVALQEV--YANVTRN 72 Query: 83 --VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + W + + + I T ++V + + GA Sbjct: 73 LTLMLGHPWV-------AVERNHEYPDTAILT------RHVLIPNTNLSTSGAV------ 113 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ-----------QA- 188 V++++ I +HL + N L Q Q Sbjct: 114 ----GVKIMLRTGFM-IHFWSLHLDYTSYGPYAANNKLVD--KLDQIMAGENVGRGPQIY 166 Query: 189 -----QWLKDWITQKKESLVPFVIAGDFN--RKINY-----LGNNDDF------------ 224 +K W+ + ++ VP IAGDFN +++ + D Sbjct: 167 EILNLPMMKKWMEKVED--VPIFIAGDFNGPSHLDWTEQTKKIHGDWVIRWPATKELEER 224 Query: 225 -----WKTIDPN----DSLIRFPKEKDSRCNANKNLRNKIPIDYF-----VMDQNAYKFL 270 ++ I PN + K + + ID+ V+ + Sbjct: 225 EFSDTFREIYPNVVSDPGITWSTVNKFNPEWNYTIPEPQDRIDFLFYKGPVVPYQILTYS 284 Query: 271 IQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 E I ++ SDH + DY F Sbjct: 285 GCEKPQRIPFHSK-----NDYPSDHFAVFADYTF 313 >gi|228943377|ref|ZP_04105825.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976169|ref|ZP_04136658.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228783535|gb|EEM31625.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816279|gb|EEM62456.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 326 Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 5/115 (4%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTE-RLINHSKRDSNNDIHTAIA 115 ++ N++ D++ QE+ S +A+ ++ + + F + E + + AI Sbjct: 22 IKDQLLNMNCDVIGFQEVFSVDALRELIKEAGFTYFSTVEMPTTDPANNKVYTSPVVAIG 81 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRA-VELLVEINGK---KIWVLDIHLKS 166 + V P D + + + +IN + I HLKS Sbjct: 82 SKYPITSVDPVIVPPFTRDDLPITHDFKFSRTPIKAKINIQDIGDIIFYVAHLKS 136 >gi|302848040|ref|XP_002955553.1| hypothetical protein VOLCADRAFT_96435 [Volvox carteri f. nagariensis] gi|300259176|gb|EFJ43406.1| hypothetical protein VOLCADRAFT_96435 [Volvox carteri f. nagariensis] Length = 1078 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 73/232 (31%), Gaps = 63/232 (27%) Query: 66 ADIVFLQEMGSYN-------AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRK 118 ADI+ L E + N A+ K + ++ S++ R S D ++A Sbjct: 6 ADIIVLTETKTDNRTGWMKDAIRK--EPQGYRLYCSSKP------RSSGKDRYSA----- 52 Query: 119 KNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYS 178 +V P L + A + VL I+ C ++L T Sbjct: 53 --GQVTHIPPPPLLQGYLCHCKISTSAST--------PLHVLGIY----CPENTLVRTTI 98 Query: 179 PS-CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR- 236 + C + +QA+ + +AGDFN L +D +D D L Sbjct: 99 YAHCRTVLRQAK----------SNGEHVALAGDFN---AVLNPDDRSTGLLDTADRLHLK 145 Query: 237 -FPKEKDSRCNANKNLRNKIP-------------IDYFVMDQNAYKFLIQES 274 + N + R+ ID +M + + E+ Sbjct: 146 FITDNTLTPVPENCSPRHPSFKQWTQECCTHQSRIDDILMCPTLHASVKAET 197 >gi|228918521|ref|ZP_04081964.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841137|gb|EEM86336.1| hypothetical protein bthur0012_56580 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 342 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 61/156 (39%), Gaps = 16/156 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 ++R ++N+ E ++ + + +D+ +++ ++ D++ QE+ S N Sbjct: 2 QIRFGTFNLYQFVEPP-YKWYEPNSFYSDADWLKKKEWIKKQILDMKCDVIGFQEVFSTN 60 Query: 79 AVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL------- 130 A+ + + + F + + + ++ AIA + + V P Sbjct: 61 ALKNLVEEVGFTHFTTVESPVTDINEPLVFIKPVVAIASKYPILSVSPVEIPDSIIEEVL 120 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 LG FSR + + + + + + HLKS Sbjct: 121 LGKTFKFSRIPIKAKIRI---DSSRDVICYVSHLKS 153 >gi|326385544|ref|ZP_08207178.1| hypothetical protein Y88_1742 [Novosphingobium nitrogenifigens DSM 19370] gi|326209878|gb|EGD60661.1| hypothetical protein Y88_1742 [Novosphingobium nitrogenifigens DSM 19370] Length = 240 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 75/288 (26%), Gaps = 55/288 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKR----TTSDYTLLRQYAKNLDA-DIVFLQEMG--S 76 + L++WNI + R T++ L A+ + D+V LQE+ Sbjct: 1 MDLLTWNIQAAIGTRRYRDYLFHAHRQVVHTSAKVVTLGHIAREITPYDVVCLQEIDLGG 60 Query: 77 YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A + + L H+ + R N + + L+ Sbjct: 61 RRAGYR-------SQVETIAALSGHAHVMVQENRVVPGISRHGNAVLSRWPLHLVRDMKL 113 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R R + + VE + V +HL QQ + D + Sbjct: 114 PGRIPGRGCLIVDVE-GPISLRVACLHLSLGASAQ-------------MQQLHAVADML- 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +V GDFN + P + R + Sbjct: 159 ---RKNPAWVAMGDFNCAAASAP-----MQAFRDRAHGKLPPTSPP----TYPSWRPRRD 206 Query: 257 IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ + + + + SDH P+S Sbjct: 207 FDHIICSADLSLTRYAAGTAIV--------------SDHRPVSAHLAL 240 >gi|307294159|ref|ZP_07574003.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] gi|306880310|gb|EFN11527.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] Length = 244 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 60/199 (30%), Gaps = 36/199 (18%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + VR+ S+NI ++ + + V + LDADI+ LQE Sbjct: 8 AHCFAMRTVRVASYNI-----RKAIGTDRRRVP------ERVIDVLNELDADIIALQEAD 56 Query: 76 SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQSYPLLGAK 134 V S + + + + H AI VRK Sbjct: 57 RRFGVRSAALPPWLLESISPYKPVPLNVHVDSMGWHGNAILVRKDVEVGAHDVL------ 110 Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLLSQQAQWLKD 193 R A V ++ + V +HL S + +QA + Sbjct: 111 -HLPCLEPRGATMAEVTLDKGSLRVFGMHLDLSGLWR--------------RKQAAAVIH 155 Query: 194 WITQKKESLVPFVIAGDFN 212 + + +P V+ GD N Sbjct: 156 AASSRDA--MPTVLMGDLN 172 >gi|297816036|ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] gi|297321739|gb|EFH52160.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] Length = 684 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + V+WN + + R +D++ ++ + D D++ +QE+ A Sbjct: 361 EPSKFVTWN------------ANSFLLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGG 408 Query: 82 KVFPKN 87 K PKN Sbjct: 409 KGKPKN 414 >gi|290962564|ref|YP_003493746.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] gi|260652090|emb|CBG75222.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] Length = 295 Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 34/162 (20%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + G++ +VL+ HL DS+ + L + + W + P V+ G Sbjct: 160 LADGGREFYVLNTHL------DSVSQYARERSAKLV--GETIAGW-----DRSAPVVVTG 206 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP------IDYFVMD 263 DFN +++ ++ + N + + + ID+ + Sbjct: 207 DFN----AAAHDNRVYELMLGNGLVDAWDAAASRSPAYGTYHGYRALKPDGRRIDWILTS 262 Query: 264 QNAYK-FLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + +FS G SDH P+ + Sbjct: 263 PGVTTHWAAMNTFSV----------DGLYPSDHLPVQVSLTL 294 >gi|302545710|ref|ZP_07298052.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653] gi|302463328|gb|EFL26421.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653] Length = 446 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN---- 212 + + ++H + L + L D+IT + ++ GD N Sbjct: 155 LDLYNVHTNAGTTDADLAARRAN--------ITQLSDFITA-NSAGNAVLVMGDTNTRYT 205 Query: 213 ------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 R + D W + S + C+ + +D + Sbjct: 206 RAADNIRDLATRNGLTDAWVNLVRGGSAPPAGSDALV-CDPDNVTNTCEVVDKVLYRSGP 264 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L ++ N D + + GK LSDH P ++D+ + Sbjct: 265 LLSLTAARYNNE--NTDFLDAEGKPLSDHYPHTVDFSW 300 >gi|227538193|ref|ZP_03968242.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241962|gb|EEI91977.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 269 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 70/302 (23%) Query: 14 VPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +P + K+ ++++NI+ + + + + K + D+V LQE Sbjct: 27 IPEPKTEKSKLTVITYNIHHGAPENSEVVN----------LENIANTIKQKNPDLVALQE 76 Query: 74 ----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV 123 + +A++ N + + ++++ + I + + R Sbjct: 77 VDVNVPRSGKVDQAKKLAELLNMNYYF-----SKSLDYNGGEYGVAILSKFPISNT--RR 129 Query: 124 LQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSL 183 L+ P+ G K + + A NGK + HL ++ N + Sbjct: 130 LELPMPVAGEKRTVALATIDLG-------NGKMLEFASTHL-----DLNVPNRTA----- 172 Query: 184 LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 QA +L + P +I GD+N +N + +L + Sbjct: 173 ---QATFLN---ELSVQLNKPIMIGGDYN-----AESNSVELTELRKQYTLSCV-----N 216 Query: 244 RCNANKNLRNKIP-IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 C + +RN ID+ ++ A + + SDH P+ Y Sbjct: 217 GCPNSFPVRNPTKAIDFVASNKLA--------VQQYSLLSAVALTGSYA-SDHLPVVAIY 267 Query: 303 DF 304 ++ Sbjct: 268 NY 269 >gi|172038905|ref|YP_001805406.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] gi|171700359|gb|ACB53340.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] Length = 262 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 102/308 (33%), Gaps = 75/308 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N++ ++ + S D++ LQE + + Sbjct: 1 MKIATWNVNSIRTRQSHVINWLSNN----------------SIDVLCLQETKVIDKDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVLQQSYPLLG-AKDSFS 138 + F + + ++ ++ + +A+ R+ ++ P++G A Sbjct: 45 EPFEELGYHVYIYGQKA------------YNGVAIFSRQPMTDIIMGFTPMVGEAIAQQF 92 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 R ++ I ++++++ + + S + Y Q Q LK ++ Sbjct: 93 DEQKRVISGVI-----DGIRIINLYVPNGAAVGSEKYQYK------LQWFQVLKVYLDNL 141 Query: 199 -KESLVPFVIAGDFN----------------RKINYLGNNDDFWK--TIDPNDSLIRFPK 239 ++ I GDFN ++ + I D+ +F Sbjct: 142 IQKESHELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALENILEIGLQDAFRKFTT 201 Query: 240 EKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 E + RN+ ID+ + Y I + D + ++ SD Sbjct: 202 EGGHFSWWDYRSGGFQRNRGWRIDHLYLTNKLYGKAINCTI-------DIEPRKQEKPSD 254 Query: 295 HCPISIDY 302 H P+ ++ Sbjct: 255 HTPVILEI 262 >gi|152985117|ref|YP_001351598.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] gi|150960275|gb|ABR82300.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] Length = 274 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 73/260 (28%) Query: 55 TLLRQYAKNLDADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKR 104 LL Y D+V LQE + +A++ W + R + + Sbjct: 59 ELLADY------DLVALQEADGGSLRSGYVNQVEHLAQLGAFPYW--YQQLNRNLGRIAQ 110 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHL 164 SN +L + P L R A+ + + V+ +HL Sbjct: 111 HSN--------------GLLSRWRPSLLEDHPLPGPPGRGAIFVRFGDGPDALVVVMMHL 156 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 ++Q +I + V+ GD N L N Sbjct: 157 ALGA-------------RTRTRQL----AYIRELIGDYRHQVLMGDMNTHAVDLLENSPL 199 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 L + ++ + + RN +D+ ++ + + Sbjct: 200 -------RDLGLMAPQVEATFPSWRPQRN---LDHILLSSD--------------LALER 235 Query: 285 IKSRGKRLSDHCPISIDYDF 304 + + +SDH P+S++ Sbjct: 236 VDVLDQPISDHLPVSVEIRL 255 >gi|72008481|ref|XP_786487.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] gi|115968135|ref|XP_001192231.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] Length = 238 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 43/186 (23%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 ++ ++++RLV+WNI L K+++ RT++ L D++FLQE+ Sbjct: 28 SLSATSKRLRLVTWNIYGLG-------NKDTLARTSAACDTLESLF----PDVIFLQEVI 76 Query: 75 --------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 ++ ++ P +++ + R ++ +LQ Sbjct: 77 PKTLHFIQERLGSLYQLVPGGQQNAYFTLTLVK-----------------RSPDINILQT 119 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC-SLLS 185 R + + G K+ ++ HL+S C + + Sbjct: 120 KIHSFPKTKM-----ARNLLIVKTACYGVKVTFMNTHLESRMQDRPERRNQLSQCMAEMK 174 Query: 186 QQAQWL 191 Q + Sbjct: 175 AQGPEM 180 >gi|71737405|ref|YP_272561.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257481811|ref|ZP_05635852.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627987|ref|ZP_06460941.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646455|ref|ZP_06477798.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485207|ref|ZP_07003300.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557958|gb|AAZ37169.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160195|gb|EFI01223.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322199|gb|EFW78295.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331850|gb|EFW87788.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330866580|gb|EGH01289.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872976|gb|EGH07125.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330986813|gb|EGH84916.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009446|gb|EGH89502.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 291 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS----------Y 77 SW L G + + +D+ D+V LQE+ Sbjct: 58 SW--QHLLPHGGRAGNLQKIGDLINDF------------DLVALQEVDGGSMRSGFVNQV 103 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A++ W + R + + SN + R + ++ P Sbjct: 104 EHLAQLGGFPYW--YQQLNRNLGRLAQHSN-----GVLSRLRPTKIEDHPLPGPAG---- 152 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL ++Q +I Sbjct: 153 -----RGAILVRFGEGEDALVVVMMHLALGT-------------RTRTRQL----AYIRD 190 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N N L + L + ++ + R + + Sbjct: 191 LIGGYRHQVLMGDMNTHANDLLEHSPL-------RDLGLLAPQIEATF---PSWRPQRCL 240 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + ++ + +SDH P++++ Sbjct: 241 DHILLSP--------------TLTLERVQVLAQPISDHLPVAVEIRL 273 >gi|261868358|ref|YP_003256280.1| exonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] gi|3132266|dbj|BAA28143.1| deoxynuclease [Actinobacillus actinomycetemcomitans] gi|261413690|gb|ACX83061.1| exodeoxyribonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] Length = 267 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 38/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGLRARPH----------------QLEEIINKYQPDVLGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + L H H +A + K+ +++ +P + Sbjct: 42 FP---YDLV---DHLGYHVNHF-GQKGHYGVALLSKQAPLSVRKGFP------TDDEEAQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + +E ++ V++ F + + L+ ++ Q + Sbjct: 89 KRIIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQ 143 Query: 203 VPFVIAGDFN 212 P +I GD N Sbjct: 144 NPVIIMGDMN 153 >gi|293392089|ref|ZP_06636423.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952623|gb|EFE02742.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] Length = 267 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 38/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGLRARPH----------------QLEEIIHKYQPDVLGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + L H H +A + K+ +++ +P + Sbjct: 42 FP---YDLV---DHLGYHVNHF-GQKGHYGVALLSKQVPLSVRKGFP------TDDEEAQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + +E ++ V++ F + + L+ ++ Q + Sbjct: 89 KRIIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQ 143 Query: 203 VPFVIAGDFN 212 P +I GD N Sbjct: 144 NPVIIMGDMN 153 >gi|326328910|ref|ZP_08195242.1| putative LigA [Nocardioidaceae bacterium Broad-1] gi|325953307|gb|EGD45315.1| putative LigA [Nocardioidaceae bacterium Broad-1] Length = 300 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 90/279 (32%), Gaps = 68/279 (24%) Query: 12 FLVPCTASVAQKVRLV----------------SWNINTLSEQEGVSLWKNSVKRTTSDYT 55 FLVP TA+ V++ +W + + + + V R Sbjct: 35 FLVPTTATAGPTVKVAQAEPVQPGFQRFAWLNAWADHHTAPGGAAAGRLDGVPRMRIVVG 94 Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFP--KNTWCIFYSTERLINHSKRDSNNDIHTA 113 LR+ A +D ++ E+ + + F + + + + + A Sbjct: 95 HLRRTA--VDFGVLA--EVEAPQ--REAFESFGREYALVSTPDATDD------------A 136 Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFCFL 170 + R+ R++ + + R G R ++V +G+++ VL +H + Sbjct: 137 VFYRRSVFRLVSKD-----TVAMYYRHGARVTAPVVVLEERSSGQRVGVLPVHFPASIPA 191 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWI--TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 + + L I + VP V+AGDFN++ ND Sbjct: 192 APRQKKWRD-----------LNAGIVKDVVASAEVPMVVAGDFNQR------NDILCDLT 234 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 P L+ + + + PID + + Sbjct: 235 SPGTGLVSPLAKHEDCATGR-----RAPIDQAFLSPSLR 268 >gi|295680429|ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295440324|gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 250 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 53/227 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLW-KNSVKRTTSDYTLLRQYAKNLDADIVFLQEM------ 74 +++R+ ++N+ V + K + KR + +DADI LQE+ Sbjct: 20 RELRIGTYNL-----HGAVGIDGKFAPKR-------IGDVLTEIDADIFALQEVPLGGAS 67 Query: 75 --GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + ++ + + R N + T VR VR L S+ Sbjct: 68 SPDVLALLQRMTGLDA-----VAGPTFDTPARRFGNAVLTRYPVRA--VRTLDLSFKSRE 120 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 R A++ ++ NG+ V+ HL L ++ + Q + + Sbjct: 121 ---------PRGALDADIDCNGELWRVVATHL-------GLASSERRA------QVEQVL 158 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPK 239 +P ++ GD N Y +L FP Sbjct: 159 QRFDTPA---LPVILLGDLNEWFVYGRTLRRLVTHFRRATALRTFPT 202 >gi|194397749|ref|YP_002037245.1| hypothetical protein SPG_0530 [Streptococcus pneumoniae G54] gi|194357416|gb|ACF55864.1| conserved hypothetical protein [Streptococcus pneumoniae G54] Length = 335 Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 60/297 (20%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + + + ++LV+WN+ + + + + DAD+ Sbjct: 94 TLSSAPNKTKTLKLVTWNVA-----------------NQIEAQHIERIFSHFDADMAIF- 135 Query: 73 EMGSYNAVAKVFPKNTWC----IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 + + +F+ + + ++ ++ IA + ++++SY Sbjct: 136 ----PELATNIRGEQENQRIKLLFHQVGLSMANYDIFTSPPTNSGIA-PVTVIVIVKKSY 190 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 +F R +L ++ +H P + +Q Sbjct: 191 GFYTEAKTFHT--TRFGTIVLHSRKQNIPDIIALH----------TAPPLPGLMEIWKQD 238 Query: 189 QWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + I + S P +IAGDFN + + K D+L P + N+ Sbjct: 239 LNI---IHNQLASKYPKAIIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNS 291 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID+ ++ +N Y D+ + SDH I + F Sbjct: 292 QSPKLFNATIDHILLPKNH-------------YYVRDLDIVSFQNSDHRCIFTEITF 335 >gi|108864566|gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1469 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 20/108 (18%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTID--PNDSLIRFPKEKDSRCNANKNLRNKI 255 + S +P+++ GDFN + ++ P +N ++ Sbjct: 552 RNSSNLPWLVIGDFNEAL-------WQFEHFSSHPRGEPQMGTPFTYDNKRQGRN-NVRV 603 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 +D + D + + SDHCPIS+ Sbjct: 604 RLDRAIADNAWRD----------TFPNATLAHLASPRSDHCPISLQLS 641 >gi|109897790|ref|YP_661045.1| hypothetical protein Patl_1468 [Pseudoalteromonas atlantica T6c] gi|109700071|gb|ABG39991.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica T6c] Length = 257 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 88/292 (30%), Gaps = 65/292 (22%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE- 73 + + L+ WN+ +K K D+ L D D++ LQE Sbjct: 18 APNPVMGPNIELLLWNV-----------FKCKKKGWLEDFKSLSS-----DKDLILLQEA 61 Query: 74 -MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 + S V + + ++ S ++ +I T V+ + QQ Y + Sbjct: 62 VLNSPYDV-------DFKKSLQHQWMMARSFKNVKTNIETG--VKTGSTVAAQQHYFSVS 112 Query: 133 AKD--SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQW 190 A + G+ + V++ HL +F D Sbjct: 113 KPSEPVSQTKKMLLATVYPLPTLGQSLLVVNSHLINFVSFDKFSMH-------------- 158 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKN 250 L + P ++AGDFN + G ++ + + SL ++ R N Sbjct: 159 LNQVFHMLENHDGPILLAGDFN---TWNGKRLRYFNQLAKSFSLDEVRMDRKPRFNHLFQ 215 Query: 251 LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 +D+ + + + SDH PIS+ Sbjct: 216 H-----LDHIYF----RGLEVVNAHVHTNIHS----------SDHYPISLTL 248 >gi|108707071|gb|ABF94866.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2, putative, expressed [Oryza sativa Japonica Group] Length = 413 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 12/142 (8%) Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 VR R ++++ GN+ AV + ++ V HL S + Sbjct: 235 VRADLARFVRRASVSCVGCGVMGCLGNKGAVSVRFWLHDTSFCVACCHLASGGRDGDEAH 294 Query: 176 TYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF------W 225 + + +LS+ + L + QK ++ GD N +I+ W Sbjct: 295 RNADATEILSRTTFPRGHSLN--LPQKILDHDRVILLGDLNYRISLPEAKTRLLVERQDW 352 Query: 226 KTIDPNDSLIRFPKEKDSRCNA 247 KT+ ND L + + + Sbjct: 353 KTLLENDQLRSEVESEGGAFHG 374 >gi|315634109|ref|ZP_07889398.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] gi|315477359|gb|EFU68102.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] Length = 267 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 38/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + DI+ LQE+ +V Sbjct: 1 MKVMSFNINGLRARPH----------------QLEEIIDKYQPDILGLQEI---KVADEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + L H H +A + K+ ++++ +P + Sbjct: 42 FP---YELV---DHLGYHVNHF-GQKGHYGVALLSKQAPLLVRKGFP------TDDEEAQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + ++ ++ V++ F + + L+ ++ Q + Sbjct: 89 KRIIMIDLDTPFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQ 143 Query: 203 VPFVIAGDFN 212 P +I GD N Sbjct: 144 NPVIIMGDMN 153 >gi|254574412|ref|XP_002494315.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] gi|238034114|emb|CAY72136.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] Length = 413 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 70/229 (30%), Gaps = 36/229 (15%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + +W + +S+ + R +D L D DIV LQE+ Sbjct: 6 LTFNTWGLKYVSKH------RQERLRAIAD--ELAD-DTKHDYDIVALQEV--------- 47 Query: 84 FPKNTWCIFYST-ERLINHSKRDSNNDIH-TAIAV--RKKNVRVLQQSYPLLGAKDSFSR 139 + W + + HS+R I + V R +P+ G+ +F R Sbjct: 48 WCDEDWEYLTTKCNKKYPHSRRFYAGIIAGPGLCVLSRIPIESTFLYRFPINGSPSAFFR 107 Query: 140 AGNRRAVEL------LVEINGKKIWVLDIHLKSFCFLD-SLENTYSPSCSLLSQQAQWLK 192 + + G+ I +L+ H+ + L+ S +C QA Sbjct: 108 GDWYVGKSVGVIKLAPLREGGRPIALLNSHMHAPYALNGSASYLCHRTC-----QAWDFA 162 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 + S V+ GD N + + ++ I Sbjct: 163 HLAEALRSSGYAVVVVGDLNSRPGSIPYR--IFQQIGQLSDSWELVHGT 209 >gi|257126278|ref|YP_003164392.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257050217|gb|ACV39401.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 263 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 53/170 (31%), Gaps = 25/170 (14%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNN 108 +L + D++ +QE+ +F W + + ++ + + Sbjct: 20 IDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREENYAWVLLETLQKYTDTDYYLHWS 79 Query: 109 DIHTAIAVRKKNVRV-----LQQSYPLLGAKDSFSRA-GNRRAVELLVEINGKKIWVLDI 162 + H + V V ++ R RR V + + G+ I Sbjct: 80 NSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQSVRTISARRIVSITINYEGQDIEFYSC 139 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 H+ P+C + ++ I + ++ ++ GDFN Sbjct: 140 HM------------NLPNCET-EDMGKNIQT-ILNRTQNSNLKILMGDFN 175 >gi|110798703|ref|YP_695757.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] gi|110673350|gb|ABG82337.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 12/106 (11%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDP---NDSLIRFPKEKDSRCNANKNLRNKIPID 258 P++I GDFN + D+ + I N++ + K D Sbjct: 165 KTPYIIMGDFNCYLE-----DNIFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGYD 219 Query: 259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ++D L + N DD K G SDH P+ + + Sbjct: 220 GRIID----YILYSKECEIKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|87116463|dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 61/157 (38%), Gaps = 17/157 (10%) Query: 149 LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV-PFVI 207 ++ N + I L H CF+ + ++ W ++ Q S+ P+++ Sbjct: 613 VISHNSQAIHTLASHRLGNCFITFAYIRPN----TFAKCGFW--EYCKQLANSIQSPWMV 666 Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC------NANKNLRNKIPIDYFV 261 GD +N + +D+ W + N + ++ + S C ++ N I V Sbjct: 667 VGD----LNDIATSDEQWGSSSLNYTSLQNFVDAYSDCGLLDPGSSGPNFTWCRFIGNRV 722 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + ++ +++ + E + + SDH PI Sbjct: 723 VQRRRLDRVLWNVSAQLTFPEAKVSVLPRLCSDHNPI 759 >gi|83770113|dbj|BAE60247.1| unnamed protein product [Aspergillus oryzae] Length = 1191 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 73/277 (26%), Gaps = 61/277 (22%) Query: 65 DADIVF--LQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I QE+ S + P + +N R + Sbjct: 641 DPTIFAVGFQEIVSLSPQQIMSTDPTTRKVWEVAVGNCLNSRARSRGTSKYVLLRSGQLV 700 Query: 113 AIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF- 167 A VR+ +R ++ + AGN+ + E + +I + HL + Sbjct: 701 GAALMVYVREDALRDVKNVEGSVKKTGLSGMAGNKGGCAIRFEYSNTRICFVTAHLAAGF 760 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINY--------- 217 D Y L Q + +I GDFN +I Sbjct: 761 ANYDERNRDYETIYHGLRFQ--------KNRAIEDHEAIIWLGDFNYRIGLDSHFVRELV 812 Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 L NND + + + + K ID D + + Sbjct: 813 AQKDYQKLYNNDQLNLQMLAGRAFPFYTEGL-----ITFPPTYKYDIDSDTYDTSEKARI 867 Query: 271 IQ---------ESFSEILYNEDDIKSRGKRLSDHCPI 298 +I YN + R SDH P+ Sbjct: 868 PAWCDRILWRGSCLRQIDYNTAKL-----RFSDHRPV 899 >gi|319774993|ref|YP_004137481.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|329123105|ref|ZP_08251675.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] gi|317449584|emb|CBY85789.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|327471660|gb|EGF17102.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] Length = 267 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 94/308 (30%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGLRARPH----------------QLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +F H +A + K+ +V+++ +P +D+ R Sbjct: 45 EITENLGYHVF------------HHGQKGHYGVALLTKQEPKVVRRGFPT-DNEDAQKR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +++ + +L + + F T+ + L+ ++ ++ + Sbjct: 91 -------IIMADLETEFGLLTV--INGYFPQGESRTHETKFPAKEKFYADLQQYLEKEHD 141 Query: 201 SLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSR 244 P +I GD N I N W + L ++ + Sbjct: 142 KSNPILIMGDMNISPSDLDIGIGDENRKRWLSTGKCSFLPEERAWYQRLYDYGLEDSFRK 201 Query: 245 CNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N N + ID+ ++ Q + + + + + Sbjct: 202 LNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDIRAME------- 254 Query: 291 RLSDHCPI 298 + SDH PI Sbjct: 255 KPSDHAPI 262 >gi|261193611|ref|XP_002623211.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] gi|239588816|gb|EEQ71459.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] Length = 629 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 18/77 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK- 82 VRL +WN+N + W R + + LDADIV QE + K Sbjct: 2 VRLTTWNVNGIRNPFSYHPW-----REKRSFEAM---FDALDADIVIFQETK----IQKK 49 Query: 83 -----VFPKNTWCIFYS 94 + N W F+S Sbjct: 50 DLQDDMVLVNGWDCFFS 66 >gi|168177838|ref|ZP_02612502.1| streptolysin associated protein SagC [Clostridium botulinum NCTC 2916] gi|182670850|gb|EDT82824.1| streptolysin associated protein SagC [Clostridium botulinum NCTC 2916] Length = 360 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+ GDF+ +N N+ I ND + K N N +L +K ID + Sbjct: 109 VLLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDL 168 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL 292 E S I ++ +K L Sbjct: 169 TSNLDALEKKSNIEDIKNQLKDYSAIL 195 >gi|77459871|ref|YP_349378.1| exonuclease III [Pseudomonas fluorescens Pf0-1] gi|77383874|gb|ABA75387.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 81/312 (25%), Gaps = 74/312 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++VS+NIN L + L + D++ LQE KV Sbjct: 1 MKIVSFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + R + + H +A+ + + +D A R Sbjct: 38 ---HDDQFPLEEVRALGYHVYFHGQKGHYGVALLSRQEPIAVHKGFATDEED----AQRR 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + NG + +++ F + + L+ + + + Sbjct: 91 FIWGTFADANGVPVTIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLESQFHNEQ 145 Query: 204 PFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLIR 236 P V+ GD N R + + W D L Sbjct: 146 PLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSFLPEEREWMARLKNWGLTDSFRHLNP 205 Query: 237 FPKEKDSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 + S + + + ID + + D ++ Sbjct: 206 DVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGLLPRVKAAGV-------DYELRGMEK 258 Query: 292 LSDHCPISIDYD 303 SDH PI ++ Sbjct: 259 PSDHAPIWLELS 270 >gi|75760558|ref|ZP_00740592.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900223|ref|YP_002448634.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|228903576|ref|ZP_04067697.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228968193|ref|ZP_04129193.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|74491954|gb|EAO55136.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541450|gb|ACK93844.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|228791496|gb|EEM39098.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856005|gb|EEN00544.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 352 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 102/321 (31%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T + + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTEINLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVR-------- 122 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 123 ----VLQQSYPLLGAKDSFSRAGN---RRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 V + L + + + R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + E+ ++ GD+N+ ++ +D + P + Sbjct: 225 KIR-------KQQVEYLKEYMNKHYENGDYVIMGGDWNQLVSNAQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|170757045|ref|YP_001780136.1| streptolysin associated protein SagC [Clostridium botulinum B1 str. Okra] gi|169122257|gb|ACA46093.1| streptolysin associated protein SagC [Clostridium botulinum B1 str. Okra] Length = 360 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 ++ GDF+ +N N+ I ND + K N N +L +K ID + Sbjct: 109 ILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDL 168 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL 292 E S I ++ +K+ L Sbjct: 169 TSNLDALEKKSNIDDIKNQLKNYSAIL 195 >gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 1795 Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 49/184 (26%), Gaps = 50/184 (27%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLR-QYAKNLD-ADIVFLQEMGS-- 76 A + + S+N L +G + + + + L+ D++ LQE+ Sbjct: 1001 ADHLLVASYNAENLDPTDGAAR-----------FAAIASEVLGRLNTPDVIALQEVQDDD 1049 Query: 77 -------------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 A+ + + + + + + +I TA R Sbjct: 1050 GPGNTASTVTSAGRTFRLVVEAI-RAAGGPDYAFIDNPYIGDDTNGGEPGGNIRTAFLYR 1108 Query: 118 --------KKNVRVLQQSYPLLGAKDSFSRAGN-------RRAVELLVEINGKKIWVLDI 162 + P+ + + R + N + + V+ Sbjct: 1109 TDRVSLAPNAVRSIAPDGSPITAGPSADQQTNPDNPFYASRPPLAADFVFNDETVTVVSN 1168 Query: 163 HLKS 166 H S Sbjct: 1169 HFTS 1172 >gi|271500687|ref|YP_003333712.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] gi|270344242|gb|ACZ77007.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] Length = 268 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 88/319 (27%), Gaps = 89/319 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAVIEQHQPDVIGLQETKVHDD---- 40 Query: 82 KVFPKNT-----WCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKD 135 +FP + + +FY H +A + K +++ +P +D Sbjct: 41 -MFPLDDVKQFGYHVFY------------HGQKGHYGVALLTKAEPLAVRRGFPT-DDED 86 Query: 136 SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 + R +++ + L + + F + ++ Q L+ ++ Sbjct: 87 AQRR--------IIMADLATPLGTLTV--VNGYFPQGESRDHPVKFPAKTRFYQDLQHYL 136 Query: 196 TQKKESLVPFVIAGDFNRK-------INYLGNNDDF-------------WKTIDPNDSLI 235 Q ++ P +I GD N I W N L+ Sbjct: 137 EQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWMERLKNWGLV 196 Query: 236 RFPKEKDSRCNAN-KNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 + + C + ID + D Sbjct: 197 DTFRAANPECQDKFSWFDYRSSGFDDNRGLRIDLIMATSPLASRCTATGI-------DYA 249 Query: 286 KSRGKRLSDHCPISIDYDF 304 ++ SDH P+ ++ Sbjct: 250 IRGMEKPSDHAPVWAEFTL 268 >gi|119482522|ref|XP_001261289.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] gi|119409444|gb|EAW19392.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Neosartorya fischeri NRRL 181] Length = 1161 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 50/172 (29%), Gaps = 26/172 (15%) Query: 65 DADIVF--LQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I QE+ + + P + +N+ + + Sbjct: 632 DPSIFAVGFQEIVALNPQQIMSTDPTPRKVWEAAVRNCLNNRAEKMGSTKYVLLRSGQLV 691 Query: 113 ----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF- 167 I V++ + ++ + +GN+ + E + +I + HL + Sbjct: 692 GAALMIFVKEDILGDIKNVEGSVRKTGLSGISGNKGGCAIRFEYSKTRICFVTAHLAAGF 751 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYL 218 + N Y C L Q + +I GDFN +I Sbjct: 752 ANYEERNNDYETICRGLRFQ--------KNRTIDDHDTIIWLGDFNYRIGLS 795 >gi|317147744|ref|XP_001822249.2| inositol-1,4,5-trisphosphate 5-phosphatase 1 [Aspergillus oryzae RIB40] Length = 1168 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 73/277 (26%), Gaps = 61/277 (22%) Query: 65 DADIVF--LQEMGS--YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I QE+ S + P + +N R + Sbjct: 618 DPTIFAVGFQEIVSLSPQQIMSTDPTTRKVWEVAVGNCLNSRARSRGTSKYVLLRSGQLV 677 Query: 113 AIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF- 167 A VR+ +R ++ + AGN+ + E + +I + HL + Sbjct: 678 GAALMVYVREDALRDVKNVEGSVKKTGLSGMAGNKGGCAIRFEYSNTRICFVTAHLAAGF 737 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINY--------- 217 D Y L Q + +I GDFN +I Sbjct: 738 ANYDERNRDYETIYHGLRFQ--------KNRAIEDHEAIIWLGDFNYRIGLDSHFVRELV 789 Query: 218 -------LGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFL 270 L NND + + + + K ID D + + Sbjct: 790 AQKDYQKLYNNDQLNLQMLAGRAFPFYTEGL-----ITFPPTYKYDIDSDTYDTSEKARI 844 Query: 271 IQ---------ESFSEILYNEDDIKSRGKRLSDHCPI 298 +I YN + R SDH P+ Sbjct: 845 PAWCDRILWRGSCLRQIDYNTAKL-----RFSDHRPV 876 >gi|282877586|ref|ZP_06286401.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281300158|gb|EFA92512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 316 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 82/262 (31%), Gaps = 55/262 (20%) Query: 66 ADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V L E+ + + + + K + + HS + D+ Sbjct: 73 PDLVALCEVENDSCLVDLTKRSLLRKARYEYVMT------HSPDERGIDV---------A 117 Query: 121 VRVLQQSYPLLGAKDSF--SRAGNRRAVELLVEING----KKIWVLDIHLKSFCFLDSLE 174 + S+ LL + R ++L + V +H S + Sbjct: 118 LLYSPFSFQLLQSYSIRIHPMKEMRPTRDILYAKGRVSLRDTLHVFVVHAPSRTAGERPT 177 Query: 175 NTYSP-SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 + + L Q L+ + ++ GDFN + D+ + + + Sbjct: 178 RAHRRLVINRLLQSVDSLRA-----LSAHPHVLLMGDFN-----DYSKDENIRQLTEHG- 226 Query: 234 LIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILY--NEDDI--- 285 L+ ++ A R + +D+ ++D++ + L++ + + ED+ Sbjct: 227 LVDVSQQAVGTHGARGTYRYRGDWGSLDHIMVDEHTAQRLVECHVHDAPFLLKEDEKYGG 286 Query: 286 ---------KSRGKRLSDHCPI 298 SDH P+ Sbjct: 287 VQPRRNYLGPRYQNGFSDHLPL 308 >gi|257068283|ref|YP_003154538.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] gi|256559101|gb|ACU84948.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] Length = 316 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 36/197 (18%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG------SYN 78 R+ ++NI D L LDAD++ LQE+ S + Sbjct: 5 RVATFNIRH-----------GLGPDERVDLPRLAGQIAALDADVIGLQEVDVRFGDRSDH 53 Query: 79 A--VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 A A++ + + + + + +A+ ++ + QQ + L Sbjct: 54 ADQAARLGELLGMQVRFGAALDLPPEAPGAPRRQY-GLALLTRHEILTQQMHLLPDHPAG 112 Query: 137 FSRAGNRRAVELLV-EINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWI 195 R + + G+++ VL HL D + + Q Q + + Sbjct: 113 PPSREPRGVLHARLRHRGGEELDVLVTHL------DDAAREHRTA------QVQGI---L 157 Query: 196 TQKKESLVPFVIAGDFN 212 ++ P V+ GD N Sbjct: 158 RLAEQIPGPAVLLGDMN 174 >gi|271967547|ref|YP_003341743.1| metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] gi|270510722|gb|ACZ89000.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] Length = 617 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 28/121 (23%) Query: 186 QQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 Q + L + P V+AGD N L D W+ + + + + Sbjct: 517 DQVEQLGRIVRDAAAGGRPVVVAGDLN-----LEPADPAWEVLMGSG-----LTDPIAPV 566 Query: 246 NANKNLRNK----IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 + ID+ ++ + D + SDH PI++ Sbjct: 567 RPFSTIPTPGGPAQQIDHVLVTPG--------------FTGRDQANVDVPHSDHRPIAVT 612 Query: 302 Y 302 Sbjct: 613 L 613 >gi|167033891|ref|YP_001669122.1| exonuclease III [Pseudomonas putida GB-1] gi|166860379|gb|ABY98786.1| exodeoxyribonuclease III [Pseudomonas putida GB-1] Length = 270 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 85/313 (27%), Gaps = 76/313 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++V +NIN L + L + D++ LQE KV Sbjct: 1 MKIVCFNINGLRARPH----------------QLAALIEKHQPDVIGLQE-------TKV 37 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + + + + + H +A + Q L + R Sbjct: 38 ---SDDQFPLADVQALGYHVHYHGQKGHYGVA-----LLSRQAPLSLHKGFATDEDDAQR 89 Query: 144 RAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 R + +G I +++ F + + L+ + + + Sbjct: 90 RFIWGTFPDADGNPITIMN-----GYFPQGESRDHPTKFPAKQRFYSDLQALLEGQFRND 144 Query: 203 VPFVIAGDFN----------------RKIN------YLGNNDDF-----WKTIDPNDSLI 235 P ++ GD N R + + W +D L Sbjct: 145 QPLLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKGWGLVDSFRHLY 204 Query: 236 RFPKEKDSRCNANK-----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ S + + + + ID + Q+ + D + Sbjct: 205 PEVTDRFSWFDYRSRGFEDDPKRGLRIDLIMASQHLVPRIKAAGV-------DYELRAME 257 Query: 291 RLSDHCPISIDYD 303 + SDH PI ++ Sbjct: 258 KPSDHAPIWLELS 270 >gi|50540416|ref|NP_001002674.1| deoxyribonuclease-1 [Danio rerio] gi|49903846|gb|AAH76479.1| Zgc:92440 [Danio rerio] Length = 278 Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 19/117 (16%) Query: 195 ITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF------PKEKDSRCNA 247 + ++ ++ GDFN Y+ N+ + + S + C Sbjct: 171 LDTRQRLNTNNIMLLGDFNAGCRYVSNSAWANIRLRTDQSYTWLIPDSADTTVTHTNC-- 228 Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V + + + S + E S+ L SDH P+ + Sbjct: 229 --------PYDRIVATPDMMRGVAPGSAQVFDFMEAHGLSQDWALAVSDHFPVEVKL 277 >gi|261210504|ref|ZP_05924797.1| exodeoxyribonuclease III [Vibrio sp. RC341] gi|260840289|gb|EEX66860.1| exodeoxyribonuclease III [Vibrio sp. RC341] Length = 268 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 27/161 (16%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + +++ ++ H Sbjct: 17 QLQAIIDKHQPDVIGLQEIKVHDDAFPREEVEAMGYQVYFHGQKA------------HYG 64 Query: 114 IAVR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A+ K+ + + +P + R + + G K VL+ + D+ Sbjct: 65 VAILCKQTPLEVIKGFPTDNEEHQK-----RMIMATFADQEGNKTTVLNGYFPQG---DN 116 Query: 173 LENTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 +E+ +Q + L ++ + + + V+ GD N Sbjct: 117 VEHETKFP---YKRQFYRDLMTYLREHRSNTERLVVMGDIN 154 >gi|189466215|ref|ZP_03015000.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] gi|189434479|gb|EDV03464.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 94/316 (29%), Gaps = 81/316 (25%) Query: 16 CTASVAQKVRLVSWNINTL-SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 + +++ ++N+ +E G S + + +Y K + D++ QE Sbjct: 103 SSNYADGYLKVATYNVGNFGTEITGYSCKE------------IARYMKQQEVDVLCFQEF 150 Query: 75 GSYN-----AVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYP 129 G ++ VF + + + + + + YP Sbjct: 151 GDNQHFPMDSIRNVFSHWRYALIPTEDSISG------------------VLPIAIFSRYP 192 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN--TYSPSCSLLSQQ 187 L+ + +++ + + + +L+ HL++ + + + ++ Sbjct: 193 LINPRFISYPQSANCSMQCDIILGRDTVRLLNNHLQTTSVNQNRRKWERGLNNTNDTRRE 252 Query: 188 AQWLKDWITQKKESLV----------------PF--VIAGDFN---RKINYLGNNDDFWK 226 + ++ I ++ V P+ V+ GDFN Y +D Sbjct: 253 VEVVQGAINTLHDNFVKRAEQTDSIRQLALASPYSVVVCGDFNSLPSSYTYAELSDILKD 312 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + + + + + IDY + Y D+ Sbjct: 313 GFRTSGRGYMYT---------FRYFKRLLRIDYIFHSPAIQGY---------RYYSPDLD 354 Query: 287 SRGKRLSDHCPISIDY 302 SDH P+ ++ Sbjct: 355 LC----SDHNPVLMEM 366 >gi|220917946|ref|YP_002493250.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955800|gb|ACL66184.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] Length = 296 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 100/297 (33%), Gaps = 50/297 (16%) Query: 19 SVAQKVRLVSWNINTL------SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + ++VR+VSWN++ L E G + + + LDAD+V LQ Sbjct: 34 TAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTAVLARLDADLVLLQ 93 Query: 73 EMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY---P 129 E+ + + + + + + R + + + + +R ++ P Sbjct: 94 EVETAALAGALAARAG---YAEARLVEGNDPRGIDVAVLSRLPLRAYVSHRDERDASGRP 150 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 L + A +G + ++ HL S D +QA Sbjct: 151 LFPRDCVEAHAAL---------PDGGTLALVGSHLSSALSDDGTRRA---------EQAA 192 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKIN----YLGNNDDFWKTIDPNDSLIRFPKEKDSRC 245 L++ + V GD N + D W IDP +L + S Sbjct: 193 RLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGW--IDPAAALPPEARWTWSGG 250 Query: 246 NANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 A + +D+ + + ++Q + + D+++ SDH P+ +D Sbjct: 251 AA------RAALDHLAIPRADAGSVVQAAIAGGP----DVQAA----SDHRPVVLDL 293 >gi|148827197|ref|YP_001291950.1| exonuclease III [Haemophilus influenzae PittGG] gi|148718439|gb|ABQ99566.1| exodeoxyribonuclease III [Haemophilus influenzae PittGG] Length = 267 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 91/308 (29%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGLRARPH----------------QLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +F H +A + K+ +V+++ +P +D+ R Sbjct: 45 EITENLGYHVF------------HHGQKGHYGVALLTKQEPKVVRRGFPT-DNEDAQKR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +++ + +L + + F + + L+ ++ ++ + Sbjct: 91 -------IIMADLETEFGLLTV--INGYFPQGESRAHETKFPAKEKFYADLQQYLEKEHD 141 Query: 201 SLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSR 244 P +I GD N I N W L ++ Sbjct: 142 KSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRN 201 Query: 245 CNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N N + ID+ ++ Q + + + + + Sbjct: 202 LNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDIRAME------- 254 Query: 291 RLSDHCPI 298 + SDH PI Sbjct: 255 KPSDHAPI 262 >gi|21952510|gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 24/133 (18%) Query: 182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI---------NYLGNNDDFWKTIDPND 232 L + + L + S P++I GDFN+ + + + + ++ Sbjct: 118 RRLWSELELLAA---NQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTS 174 Query: 233 SLIRFPKEKDSRCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 ++ P + N N ID +++ +LI S + + Sbjct: 175 NISDLPFRGNHYTWWNNQENNPIAKKIDRILVND---SWLIASPLSYGSFCAMEF----- 226 Query: 291 RLSDHCPISIDYD 303 SDHCP ++ Sbjct: 227 --SDHCPSCVNIS 237 >gi|300774356|ref|ZP_07084220.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] gi|300507000|gb|EFK38134.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] Length = 269 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 60/312 (19%) Query: 10 VFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIV 69 + FL+ +Q + ++S+NI L+ + K+ +D L Y D Sbjct: 1 MVFLMLFALGFSQDLTVMSFNIR-LNVESDKDNAWPKRKQDVADL--LTYY----HPDYF 53 Query: 70 FLQE-----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI--AVRKKNVR 122 +QE M A + S T V+ Sbjct: 54 GVQEALPEQMKDIKA-----GLKNYDYIGVGRDDGKEKGEFSAIFYDTNRLDVVKSGTFW 108 Query: 123 VLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCS 182 + + D+ A NR + + K L ++L + + + Sbjct: 109 LSETPEKPSKGWDA---ALNRICTYAVFKDKKSKKEFLAMNL---------HFDHIGNVA 156 Query: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN--------DSL 234 + LK I + +P ++GDFN L ++ + K + N ++ Sbjct: 157 RVKSSELILKK-IKELNPKNLPVTLSGDFN-----LTDDSEPIKILSQNMKDTFYHSETK 210 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQ--NAYKFLIQESFSEILYNEDDIKSRGKRL 292 P + + N +++ IDY I + +LY Sbjct: 211 HYGPVGTFTAFDVNTVPKDR--IDYIFTQGFTIRSHRHINDRRENLLYP----------- 257 Query: 293 SDHCPISIDYDF 304 SDH P+ + Sbjct: 258 SDHFPVIVHLSL 269 >gi|157964331|ref|YP_001499155.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5] gi|157844107|gb|ABV84608.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5] Length = 292 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 78/310 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ A DI+ LQE S + Sbjct: 22 MKIVTWNINSLRLR----------------IDLLRKLAYEHQPDIILLQETKVADSLFPL 65 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ + + + + + ++ Sbjct: 66 EVIKNIGYEHVIYSGQKS------------YNGVAI------ISKFPLNNVFSLELYNSD 107 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A + N +I + ++ + D + + + + +++W+T + Sbjct: 108 KRHIAAIV----NDIEIH--NFYVPAG--GDIPDIEVNTKFKHKLEYVRLMQEWLTTNRT 159 Query: 201 SLVPFVIAGDFN--------------RK-INYLGNNDDFWKTIDP-----NDSLIRFPKE 240 +I GD N R I++ + + S + Sbjct: 160 KNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNVLGFIDSSRHFVSLD 219 Query: 241 KDSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + K +D+ + N L +L D SD Sbjct: 220 TKFYTWWSYRNIDWKKSNKGRRLDHIWVSDNLKDALFS---MHLLPEARDWSPP----SD 272 Query: 295 HCPISIDYDF 304 H P + ++ Sbjct: 273 HVPYFVTFNL 282 >gi|313835987|gb|EFS73701.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA2] gi|314929662|gb|EFS93493.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL044PA1] gi|314970515|gb|EFT14613.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA3] gi|328906267|gb|EGG26042.1| exodeoxyribonuclease III [Propionibacterium sp. P08] Length = 297 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 32/130 (24%) Query: 199 KESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDS 243 F++ GDFN +L ++ TI D+L+ + + Sbjct: 174 AAQGRHFLVIGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTIVSPDTLVDVLRAQHP 233 Query: 244 --------RCNANKNLRNK--IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 K N IDY + K + D S +R S Sbjct: 234 DINGPYSWWSWRGKAFINDAGWRIDYHLASPELAK-------RAVTTEIDRDSSYAERTS 286 Query: 294 DHCPISIDYD 303 DH + +DYD Sbjct: 287 DHAAVVVDYD 296 >gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] Length = 253 Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 11/50 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDYF++ + L+ + + SDHCP+ ++ +F Sbjct: 215 WRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPVELEINF 253 >gi|320581870|gb|EFW96089.1| hypothetical protein HPODL_2372 [Pichia angusta DL-1] Length = 419 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 22/166 (13%) Query: 11 FFLVPCTASVAQKVRLVSWNI--NTL---SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 +P T V ++S+N+ L S KR+ + L YA Sbjct: 38 LVELPRTQPVQNTFTIMSYNLLAQALIRRSLFPDNGAILKWNKRSEALLAELEYYA---- 93 Query: 66 ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 ADI+ LQEM + W + N R + A+ + ++ Sbjct: 94 ADIMCLQEMDYIQY------NSYWSPKLARLGYENKYYRSGTKNHGVAVFYKASKFTLVD 147 Query: 126 QSYPLLGAKDSFS----RAGNRRAVELLVEINGKKIWVLDI---HL 164 S+ + A + + ++ + VL + HL Sbjct: 148 SSFMDYDKVATNGIVPRTATQNVGLLVALQPKNRPESVLVVGTTHL 193 >gi|284033875|ref|YP_003383806.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813168|gb|ADB35007.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 320 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 52 SDYTLLRQYAKNLDADIVFLQEMGSYNAVA---KVFPKNTWCIFYSTERLINHSKRDSNN 108 +D + Q D D+ +QE+ + + + + + + N + R + Sbjct: 62 ADTDRIAQRLLEADVDVWVVQEIENVDVLREFNREHLNGAYRHVMVID--GNDATRFIDI 119 Query: 109 DIHTAIAVRKKNVRVLQQS---YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 I R+ V +P L ++ FSR VE+L + K + V HLK Sbjct: 120 ----GILSRRPIGGVTSYQRVFHPDLPSRPVFSRDLVE--VEILDDRGRKLLTVFGTHLK 173 Query: 166 SFCFLDS----LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 S F+D + S L ++QA+ + I + + +++ GD N Sbjct: 174 SK-FVDFTVPDPAAAAAESDLLRTRQAETITRIIASRMSTRQRYLLCGDMN 223 >gi|265762754|ref|ZP_06091322.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255362|gb|EEZ26708.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 285 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 64/310 (20%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + L C+++ VR+ ++NI + + ++ WK + ++ + Sbjct: 10 VFITLLLAGCSSNPITHVRVATFNIRYDNPGDSLNSWKYRK-------EKVCEFIREKHP 62 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ- 125 D++ +QE+ ++ + + + + RK +L Sbjct: 63 DVLGMQEVLNHQLKDLLSGLPDYAYVGVGREDGKTQGE------YAPVFYRKDKYDLLDS 116 Query: 126 -----QSYPLLGAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYS 178 +P K + A R A ++ GK+ +L+ H F Sbjct: 117 NTFWLSEHPDSIGKLGWDAACTRVATWAKLKDKTTGKEFLMLNTH-----FDHVGTEARR 171 Query: 179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 S A + D I + ++ GDFN + + ++ + Sbjct: 172 NS-------ALLIIDKIKE-IAGTHSAMMTGDFN------VSEEWEAYKTITSNEFVLKD 217 Query: 239 KEKDSRCNANKNLRN----------KIPIDYFVMDQN---AYKFLIQESFSEILYNEDDI 285 K + + +N + ID+ + A +I + ++ Y Sbjct: 218 AWKIAGKQSGENYTFHDFGRVPVAEREKIDFIFVTPQIKVADAEIISSAITDSTY----- 272 Query: 286 KSRGKRLSDH 295 LSDH Sbjct: 273 ------LSDH 276 >gi|71065887|ref|YP_264614.1| endonuclease/exonuclease/phosphatase family protein [Psychrobacter arcticus 273-4] gi|71038872|gb|AAZ19180.1| possible endonuclease/exonuclease/phosphatase family protein [Psychrobacter arcticus 273-4] Length = 341 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 78/221 (35%), Gaps = 36/221 (16%) Query: 26 LVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEM-GSYNAV 80 + + N+ + + N+ + +Y + ADI+ +QE+ S + Sbjct: 14 IATANLLNFA-NPNRLYYPNAPAYSNHEYEHKLRGITDLLSKAHADIIAVQEVWDSEALI 72 Query: 81 AKVF-----PKNTWCIFYSTERLINHSK-RDSNNDIHTAIAVRKKNVR------VLQQSY 128 A P++ S + +++ + + N I R ++ +L ++ Sbjct: 73 ALAVSLGFKPEHVVIPLASNDSASPYTQGKGAQNTPAVGIISRFAHLESRLLEDILPKAI 132 Query: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS----------FCFLDSLEN--- 175 + + R R + L V+ G+ I ++ HLKS L+ +++ Sbjct: 133 INIPDIGPYQRFN-RPPLVLRVDAFGQPITIITAHLKSKRAFFLRDEAGNLLEDMDDPNI 191 Query: 176 ----TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 C ++ A I + + + P ++ GD N Sbjct: 192 RIRAKLRSLCMRAAEAASIRLSIIDRLQHTREPLILLGDMN 232 >gi|282880129|ref|ZP_06288849.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306002|gb|EFA98042.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 311 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 27/126 (21%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-- 252 I + + P ++ GDFN + +D+ +K + L R N + Sbjct: 177 IKEIAGNNAPVILTGDFN-----VDQHDEIYKIFSESGILKDSYVAAKHRFAENGTFQDF 231 Query: 253 -----NKIPIDYFVMDQN--------------AYKFLIQESFSEILYNEDDIKSRGKRL- 292 ++ ID+ + + + S E + + RL Sbjct: 232 DSSMKSESRIDHIFVSNKFEVNNYAIHTDAYWTANEKMPKLKSGNAPKELEFQQYTHRLP 291 Query: 293 SDHCPI 298 SDH P+ Sbjct: 292 SDHYPV 297 >gi|126657177|ref|ZP_01728343.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] gi|126621448|gb|EAZ92159.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] Length = 262 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 77/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++ +WN+N RT + + N D++ LQE + + Sbjct: 1 MKIATWNVN--------------SIRTRK--PHVVDWLTNNSIDVLCLQETKVIDQDFPR 44 Query: 82 KVFPKNTWCIFYSTERLINHS---KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFS 138 + F + + ++ ++ N R D+ T V ++ + Sbjct: 45 EPFEELGYHVYIYGQKAYNGVAIFSRQPMTDVITGFT-----PMVGEEIAQQFDEQKRVI 99 Query: 139 RAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK 198 I ++++++ + + S + Y Q + LK ++ Sbjct: 100 SGVIDG------------IRIINLYVPNGASVGSEKYEYK------LQWFKVLKAYLDNL 141 Query: 199 KESLVPF--VIAGDFN----------------RKINYLGNNDDFWK--TIDPNDSLIRFP 238 + + I GDFN ++ + K I D+ +F Sbjct: 142 IK-KESYELCICGDFNIALEDKDIYNSKGKENHIMSSPLEREALEKILKIGLKDAFRKFT 200 Query: 239 KEKDSRCN----ANKNLRNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 E + RN+ ID+ + Y+ + + D + +R S Sbjct: 201 TEGGHFSWWDYRSGGLQRNRGWRIDHLYLTNKLYEKAVNCTI-------DIEPRKQERPS 253 Query: 294 DHCPISIDY 302 DH P+ ++ Sbjct: 254 DHTPVILEI 262 >gi|169601596|ref|XP_001794220.1| hypothetical protein SNOG_03666 [Phaeosphaeria nodorum SN15] gi|111067751|gb|EAT88871.1| hypothetical protein SNOG_03666 [Phaeosphaeria nodorum SN15] Length = 1207 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 82/275 (29%), Gaps = 59/275 (21%) Query: 66 ADIVF--LQEMGSYNAVAKVFPKNTWCIFYSTERL---INHSKRDSNNDIHT-------- 112 +IV QE+ + ++ + + +N + + + Sbjct: 649 PEIVAVGFQEIV-ELSPQQIMATDPDRRELWERAVKNTLNRNAEKHGREEYVLLRGGQLV 707 Query: 113 ----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 ++ VR ++ ++ L AGN+ AV + +E I ++ HL + Sbjct: 708 GASLSVFVRGDCLKHIKNVEGSLKKTGMSGMAGNKGAVAIRIEYGNTSICLVTAHLAAGF 767 Query: 169 FLDSLENTYSPSCSL-LSQQAQWLKDWITQKKESLVPFVI-AGDFNRK------------ 214 N + S L Q + VI GDFN + Sbjct: 768 SNYEERNRDYKTISHGLKFQ--------RNRSIEDHDTVIWFGDFNYRIGLSNEKVQKLC 819 Query: 215 ----INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA---- 266 + L ND + + + + +R + + D + + A Sbjct: 820 HVGDLETLYENDQLNLQMVAGLTFPYYSE---ARITFPPTYKYDLNSDTYDTSEKARIPA 876 Query: 267 ---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 ++ +I Y+ + R SDH P+ Sbjct: 877 WCDRVLRKGDNIRQIHYDAAPL-----RFSDHRPV 906 >gi|324517012|gb|ADY46703.1| Unknown [Ascaris suum] Length = 323 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 42/185 (22%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + ++ + DIV LQE+ + + ++ I R + S D TAI Sbjct: 47 KVAKHISYVYPDIVALQEIENETVIGQL-------IKMLGRRWSGVANNYSYPD--TAIL 97 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 R + +S + ++L+ I+ + + + +HL + N Sbjct: 98 TRHPII------------NNSIATTARSVGAKILLPIHNRTVQIYSLHLDYRSYGPYAAN 145 Query: 176 TYSPSCSLLSQQAQ---------------WLKDWITQ--KKESLVPFVIAGDFNRKINYL 218 S + + L D + K+ P ++ GDFN Sbjct: 146 NKLVSYATQIMAGERNIDGNGRFENMREFILDDGFRRAVKRSKEEPLLVCGDFN----AP 201 Query: 219 GNNDD 223 + D Sbjct: 202 SHLDW 206 >gi|109037932|ref|XP_001097104.1| PREDICTED: deoxyribonuclease gamma isoform 1 [Macaca mulatta] Length = 305 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 6/103 (5%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 F+ GDFN +Y+ + + + +++ K D V+ Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT---TVKRSTKCAYDRIVL 238 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 Q ++ +S S + + + + L SDH P+ Sbjct: 239 RGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|58583508|ref|YP_202524.1| hypothetical protein XOO3885 [Xanthomonas oryzae pv. oryzae KACC10331] gi|188575228|ref|YP_001912157.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428102|gb|AAW77139.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188519680|gb|ACD57625.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 255 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 92/297 (30%), Gaps = 60/297 (20%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--------D 67 AS ++ +R+++ NI + + V R+ S L +LD+ D Sbjct: 1 MNASDSRILRVLTANIQ---AGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAALVGERD 57 Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 IV LQE ++ F T + + ++ N + +A + + Sbjct: 58 IVGLQE-ADPGSLRSGFTNQTH--YLAERAGFDYWSHQPNRRMG-GVASSANGLLSKLEP 113 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 + R G R + + V HL + + L+ Sbjct: 114 LEVQDHA-LPGRIGGRGILLAKFGEGRDGLAVAVAHLSLG---------ANSRMAQLAFI 163 Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 A+ L D ++ GDFN + + SL R + + C Sbjct: 164 AELLSD--------HPNAMLMGDFN-----CMADRPEMQ------SLYRHTRLQPPSCEV 204 Query: 248 NKNLRNKI--PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + ID+ ++ +I+ + ++ SDH + +D Sbjct: 205 HTFPSWRPDRAIDHILVSD---SLVIEHT-----------EAIPAAFSDHLAVGMDI 247 >gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162] Length = 253 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 11/50 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDYF++ + L S SDHCP+ +D DF Sbjct: 213 WRIDYFIVSPSLKDRLQDASIHT-----------EIMGSDHCPVELDIDF 251 >gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2] gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2] Length = 254 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 11/49 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDYF++ ++A + + + +Y SDHCP+S+++D Sbjct: 213 WRIDYFLVSEDAKEAIREARIHTDIYG-----------SDHCPVSLEFD 250 >gi|261884462|ref|ZP_06008501.1| endonuclease/exonuclease/phosphatase, putative [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 245 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 75/240 (31%), Gaps = 50/240 (20%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 K LDAD + + E+ + + + ++ K+ + + + +N + + V K Sbjct: 2 IKALDADFISVLEIENSSVLKQLAMKSGYKFY----------EFATNKNAPVGLGVMSK- 50 Query: 121 VRVLQQSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 YP+L ++ R + + G+ I H + + Sbjct: 51 -------YPILSSRKIVIPNLKTRPILVSEISFGGETIKFFSTHFPA---AKNSLKDRKT 100 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPN-DSLIRFP 238 + + + I + +I GD N Y ++ +L F Sbjct: 101 AANTM----------IKAVENEKNS-IILGDLNSNYGYGF----LLNDLNGEFKNLWEFV 145 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYK---FLIQESFSEILYNEDDIKSRGKRLSDH 295 + +D + + ID+ ++ + + SF + I SDH Sbjct: 146 RNRD-----RSSYKKGGAIDHIMLQNSFFNGNIRYKDSSFGVFKPSFLSIGKF----SDH 196 >gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] Length = 253 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 11/50 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDYF++ + L+ + + SDHCP+ ++ +F Sbjct: 215 WRIDYFIVSDDLKDNLVDAKIHQSI-----------MGSDHCPVELEINF 253 >gi|41053678|ref|NP_957163.1| deoxyribonuclease gamma-like [Danio rerio] gi|38649119|gb|AAH63237.1| Zgc:77816 [Danio rerio] Length = 282 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 12/118 (10%) Query: 188 AQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247 + W +I GDFN Y+ I + + Sbjct: 154 VEVRDKW------KTDNVMILGDFNADGAYVSKKKMKAIRIRTDTDFHWLIGDDVDT--- 204 Query: 248 NKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 N D V+ ++ + ++ S + E + + L SDH P+ + Sbjct: 205 TVKTTNDNTYDRIVVYKEDMLEAVVPRSAKPFNFQEAYKLTEEEALDVSDHYPVEVTL 262 >gi|328853157|gb|EGG02298.1| hypothetical protein MELLADRAFT_38694 [Melampsora larici-populina 98AG31] Length = 366 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 43/268 (16%) Query: 65 DADI--VFLQEMG--SYNAVAKVFPKN----TWCIFYS--TERLINHSKRDSNNDIHTAI 114 + DI + QE+ S + P+ I S S +D Sbjct: 58 EPDIMVIAFQEIVKLSPQQIMITDPEKKRRWEQTIMTSLERRPDKKSSYVILRSDQLVGT 117 Query: 115 A----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 A V+ V ++ AGN+ AV + ++ + + H + Sbjct: 118 ALIILVKSDMVNEVRSVEATTKKTGLKGMAGNKGAVSIRLQYHDSSFCFVTAHFAAG--- 174 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDP 230 + + + + ++LK + S + AGDFN +I +N+ + + Sbjct: 175 YNNVEERNHDYLTIYNELEFLKG---KTISSHENVIWAGDFNYRIGGGLSNEFVRQAVVE 231 Query: 231 NDSLIRFPKEK---------------DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESF 275 D ++ + + I D + + K I Sbjct: 232 KDLTTLLAADQLLANMSTQAVFPKYLEGPITFPPTYKYDIGTDRY---DTSEKLRIPAWT 288 Query: 276 SEILYNEDDIKSRGK-----RLSDHCPI 298 ILY DD+ ++SDH P+ Sbjct: 289 DRILYLGDDLDLTNYSRAELKVSDHRPV 316 >gi|296225529|ref|XP_002758534.1| PREDICTED: deoxyribonuclease gamma-like isoform 1 [Callithrix jacchus] Length = 305 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRIDPRFVWLIGDQEDT----TVKKSTNCA----- 232 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + S K L SDH P+ Sbjct: 233 -----YDRIVLRGQEIVSSIVPKSTSVFDFQKAYKLSEEKALDVSDHFPVEFKL 281 >gi|152984896|ref|YP_001348249.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas aeruginosa PA7] gi|150960054|gb|ABR82079.1| endonuclease/exonuclease/phosphatase family [Pseudomonas aeruginosa PA7] Length = 322 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 14/137 (10%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 ++++ WN + +++ D+ LR Y + DI+ L E G + + Sbjct: 2 PLKIMIWNAQHF---DNQKYFRSQAYTDKLDF--LRHYLTQEEIDIIALMETGKTGDINQ 56 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGN 142 + S I + ++S +T + ++ + L+ S Sbjct: 57 TLIDD----LSSEYTFIGATSQESGARKNTTLGTMIFLKNIISTKFSLIDNY-ILSPTEQ 111 Query: 143 RRAVELLVEINGKKIWV 159 R AV + K + Sbjct: 112 RGAVIIK----HNKTHL 124 >gi|116695510|ref|YP_841086.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113530009|emb|CAJ96356.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 243 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 40/180 (22%) Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 + + LDADIV LQE+ S + S + + + + + + Sbjct: 21 DRIATVLEELDADIVALQEVESGS---------------SNDHTLEYLAGHTGMHVVSGF 65 Query: 115 A-VRK----KNVRVLQQSYPLLGAKDSFSRA-GNRRAVELLVEIN----GKKIWVLDIHL 164 VR N + + + + D + R A+++ + + V+ HL Sbjct: 66 TRVRGNADYGNALLARFAPQAVNQIDLTVKGCEPRGAIDVTLACTASGWESALRVIATHL 125 Query: 165 KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDF 224 +Q Q L +++ +P ++ GD N + Sbjct: 126 --GLRPGERR-----------RQVQQLLNYVAA--APPLPTILLGDVNEWFLWGRPLRWL 170 >gi|260566115|ref|ZP_05836585.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis bv. 4 str. 40] gi|260155633|gb|EEW90713.1| endonuclease/exonuclease/phosphatase family protein [Brucella suis bv. 4 str. 40] Length = 212 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 28/178 (15%) Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV---- 116 ADI++LQE+ + A+ F + + + D N+ +AV Sbjct: 6 IAETRADILYLQEVDNLAAL-NAF-EYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMRD 63 Query: 117 --RKK----------NVRVLQQSY----PLLGAKDSFS--RAGNRRAVELLVEINGKKIW 158 R + + + P L R R + + + I G+ + Sbjct: 64 ITRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPLS 123 Query: 159 VLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN 212 + HLKS + ++ + S + +A+ ++ I +K + + ++I GDFN Sbjct: 124 LFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFN 181 >gi|269128774|ref|YP_003302144.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268313732|gb|ACZ00107.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 238 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 76/274 (27%), Gaps = 52/274 (18%) Query: 26 LVSWNINTL--SEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM--GSYNAVA 81 + +WN+ +E G + + ++ ++ LQE+ + Sbjct: 1 MATWNVLHRVHAENWGAEAIPKCWPKEPERIAAITEWLAGRTEQVIALQEVSGDQLADLR 60 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + P T+ +D +++ ++ +SF Sbjct: 61 RALPGRTFHTLRYPRVPAPRQGSCPLSDP-------GEHLVLMVDGTSQFRGAESFGNDP 113 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + + V + V+ HL S + P Q L + E Sbjct: 114 GKGVLAVQV----AETLVIATHL-------SGDRRRVP-------QLARLAELAAAHPE- 154 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++ GDFN + + ++ P ++ +D+ V Sbjct: 155 -RPVLLLGDFN------TDRATVASGLGEGFTVAALPPGSP-PTRLHRPHAETHTVDHVV 206 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + ES DD LSDH Sbjct: 207 VRDATIVDTAVES-------SDD-------LSDH 226 >gi|225456791|ref|XP_002277389.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 248 NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 K ++ IDYF++ + ++ I+ +G SDHCP+S++ Sbjct: 298 GKYRGKRMRIDYFIVPEALKDRIVACEIH-----GQGIELKGFYGSDHCPVSLELS 348 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 12/66 (18%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + ++ ++WN + + R +++ ++ +LD D++ +QE+ A + Sbjct: 38 EPLKFLTWN------------ANSFLIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGS 85 Query: 82 KVFPKN 87 K PKN Sbjct: 86 KGAPKN 91 >gi|294011035|ref|YP_003544495.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] gi|292674365|dbj|BAI95883.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] Length = 248 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 61/208 (29%), Gaps = 36/208 (17%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L + + VR+ S+NI ++ + + V + LDA Sbjct: 3 LPMETGRAMAHCFAMKTVRVASYNI-----RKAIGTDRRRVP------ERVIDVLNELDA 51 Query: 67 DIVFLQEMGSYNAVA-KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQ 125 DI+ LQE V P + + DS AI VRK+ Sbjct: 52 DIIALQEADRRFGVRSAALPPWLLESISPYRPVPLNVHVDSMGWHGNAILVRKEAEVGAH 111 Query: 126 QSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK-SFCFLDSLENTYSPSCSLL 184 R A V + + V +HL S + Sbjct: 112 DVL-------HLPCLEPRGATMAEVTLGKASLRVFGMHLDLSGLWR-------------- 150 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFN 212 +QA + + + +P V+ GD N Sbjct: 151 RKQAAAVIHAASSRDA--MPTVLMGDLN 176 >gi|284166543|ref|YP_003404822.1| endonuclease/exonuclease/phosphatase [Haloterrigena turkmenica DSM 5511] gi|284016198|gb|ADB62149.1| Endonuclease/exonuclease/phosphatase [Haloterrigena turkmenica DSM 5511] Length = 363 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLS-QQAQWLKDWITQKKES 201 + A + +++ K+ + HL S L + L QQ + L ++ ++ Sbjct: 167 KGANYVELDLGPGKVDLFTTHLVSG-SLLPWTDGGDEDIPALRGQQLEELGAFVAEQTSP 225 Query: 202 LVPFVIAGDFN 212 ++AGDFN Sbjct: 226 ENVTLVAGDFN 236 >gi|34580716|ref|ZP_00142196.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262101|gb|EAA25605.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 271 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 45/192 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ A DI+ LQE S + Sbjct: 1 MKIVTWNINSLRLR----------------IDLLRKLAYEHQPDIILLQETKVADSLFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ + + + + + ++ Sbjct: 45 EVIKNIGYEHVIYSGQKS------------YNGVAI------ISKFPLNDVFSLELYNSD 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A + N +I + ++ + D + + + + +++W+T + Sbjct: 87 KRHIAAIV----NDIEIH--NFYVPAG--GDIPDIEVNTKFKHKLEYVRLMQEWLTTNRT 138 Query: 201 SLVPFVIAGDFN 212 +I GD N Sbjct: 139 KNDKMIIVGDLN 150 >gi|317418605|emb|CBN80643.1| Deoxyribonuclease gamma [Dicentrarchus labrax] Length = 295 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM-DQ 264 +I GDFN Y+ + I + + + +N RN D V+ Sbjct: 135 MILGDFNADGLYVSKKEMKGIRIRSDKNFHWLIGDDVDTTASN---RNDHTYDRIVVYGD 191 Query: 265 NAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + + ++ S + + S + L SDH P+ ++ Sbjct: 192 DMLQAVVPNSAKPFNFQKAYGLSEEQALKVSDHYPVEVEM 231 >gi|254506149|ref|ZP_05118293.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] gi|219550967|gb|EED27948.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] Length = 268 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 23/159 (14%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPLEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P + R + L + NG+K+ VL+ + D++ Sbjct: 67 MLCKKEPISIQKGFPTDNDEHQK-----RMIMVTLEDDNGEKVTVLNGYFPQG---DNIG 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 + +Q + L ++ + ++ GD N Sbjct: 119 HETKFP---YKRQFYKDLMTYLNDHHNNDEQLIVMGDIN 154 >gi|85375599|ref|YP_459661.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] gi|84788682|gb|ABC64864.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] Length = 233 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 83/288 (28%), Gaps = 77/288 (26%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG----SYN 78 ++ + S+NI +R + + + LDADI+ LQE Sbjct: 2 QLTVASYNI--------HKAVGTDRRRDPA---RIVSVLRELDADIIALQEADLRFGQRA 50 Query: 79 AV--AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 +V + W +R + + A+ VR+ V ++ L + Sbjct: 51 SVLPRALLDDTPWKAVAVAKRPRSLGWHGN------ALLVRRGMEIVDSEALDLPMLE-- 102 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 R A + V+ HL D S + Sbjct: 103 -----PRGAACADIANGKGAFRVVGTHL------DLSGVRRSDQIRTILAHLH------- 144 Query: 197 QKKESLVPFVIAGDFNR---KINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 + +P ++ GDFN+ + + D+ W+ + + + Sbjct: 145 -RAHPDMPEILMGDFNQWSVRSGAMRVFDEKWQVLS-----------------PGPSFPS 186 Query: 254 KIPI---DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + PI D + ++ + + + SDH PI Sbjct: 187 RRPIARLDRIALSP---QWQVVGQGVH-------HSALSAQASDHLPI 224 >gi|256822581|ref|YP_003146544.1| endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] gi|256796120|gb|ACV26776.1| Endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] Length = 248 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 88/274 (32%), Gaps = 72/274 (26%) Query: 55 TLLRQYAKNLDADIVFLQEMGS----------YNAVAKVFPKNTWCIFYSTERLINHSKR 104 + + ++ DADI+ LQE+ +A+ + + K Sbjct: 23 ERIVEILESYDADIIALQEVDDGVPRSRELNLAKELAEALDFPYYVL----------GKN 72 Query: 105 DSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWV--LDI 162 S H A + V +++ L D+ R G + + K++ + ++ Sbjct: 73 VSLKKGHYGNATLSRYPIVRERNIDL--TIDNKKRRGCQHTTIDIPSSPSKEVHLEVFNL 130 Query: 163 HLKSFCFLDSLENTYSPSCSLLSQQAQWL---KDWITQKKESLVPFVIAGDFNRKINYLG 219 HL + +Q Q L ++ ++S +I GDFN Sbjct: 131 HL--------GLSAKERD-----KQIQKLLHSSEYNKLNEDSNK--LIIGDFN------- 168 Query: 220 NNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL 279 D SL+R P +++ + R K V Y + + Sbjct: 169 --DW--------RSLLRKPLTEEAGFLCATDRRYKNK----VSALKTYPSFSPRGGLDRI 214 Query: 280 YNEDDIKSRGKRL---------SDHCPISIDYDF 304 + + D+K + L SDH P+ ++ Sbjct: 215 FYQGDLKLKNVFLCRKKLSKVASDHKPVIAEFKL 248 >gi|32381240|gb|AAP80580.1| DNA nuclease [Streptococcus suis] Length = 1041 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 66/235 (28%), Gaps = 48/235 (20%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---- 74 K+ + S+NI S + V+R + D++ L E+ Sbjct: 626 PNDDKLTIASYNIENFSANSKST-SDAKVQRIAKSFVS-----DLHSPDVIGLIEVQDNN 679 Query: 75 --------GSYNAVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 + + ++ T+ + N +I K Sbjct: 680 GATNDGTTDASKSAERLIAAIQAAGGPTYT-YVDIAPENNKDGGQEGGNIRVGFLYNSKR 738 Query: 121 VRVLQQS---------------YPLLGAKDSFSR--AGNRRAVELLVEINGKKIWVLDIH 163 V + + LG D + A R+ + G+K+ VL H Sbjct: 739 VSLSDKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANH 798 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVP------FVIAGDFN 212 L S + L P ++ L I ++ + V+ GDFN Sbjct: 799 LNSKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFN 853 >gi|311063871|ref|YP_003970596.1| hypothetical protein BBPR_0452 [Bifidobacterium bifidum PRL2010] gi|310866190|gb|ADP35559.1| Conserved hypothetical membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain [Bifidobacterium bifidum PRL2010] Length = 371 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 56/225 (24%), Gaps = 46/225 (20%) Query: 51 TSDYTLLRQYAKNLDADIVFLQEMG-------SYNAVAKVFPKNTWCIFYSTERLINHSK 103 +D + ++ +++ LQE + P + S++ + Sbjct: 159 HADAKAIVDIVRDQRVEVLALQETTNDFVKKLDEAGIHSYLP---YSQVSSSDGVYG--- 212 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 + P+ + S A + ++ + +H Sbjct: 213 --------------NGIWSATELGRPVDD--EVGSSASFMPGGTVTFGGGKAQLRFVSVH 256 Query: 164 LKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD 223 + S L + + + +V GDFN ++ + Sbjct: 257 TTAPIPGYWSRWKRS------------LDELASMRSHEGSRYVFMGDFNATTDHTPFRNI 304 Query: 224 FWKTIDPND--SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 S F S ID+ V+D++ Sbjct: 305 LGNRFSDAARQSGHGFTFTWPSNKLPLPRF---AGIDHIVLDKDI 346 >gi|70987454|ref|XP_749140.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66846770|gb|EAL87102.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|159123088|gb|EDP48208.1| SacI domain and endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 1160 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 26/172 (15%) Query: 65 DADIVF--LQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 D I QE+ + + P + +N+ + + Sbjct: 633 DPSIFAVGFQEIVALNPQQIMSTDPTPRKVWEAAVRNCLNNRAEKMGSTKYVLLRSGQLV 692 Query: 113 ----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF- 167 I V++ + ++ + +GN+ + E + ++ + HL + Sbjct: 693 GAALMIFVKEDILGDIKNVEGSVRKTGLSGMSGNKGGCAIRFEYSKTRLCFVTAHLAAGF 752 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYL 218 + N Y C L Q + +I GDFN +I Sbjct: 753 ANYEERNNDYKIICRGLRFQ--------KNRTIDDHDTIIWLGDFNYRIGLS 796 >gi|307826200|ref|ZP_07656410.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] gi|307732734|gb|EFO03601.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] Length = 284 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 29/155 (18%) Query: 150 VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAG 209 + + + + ++ IH F + + Q L I P +IAG Sbjct: 159 LSGSSQDVHIVCIH-----FGLTGKERR--------LQISKLCARIDSHVPHDAPLIIAG 205 Query: 210 DFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 DFN ++LG D + + R + +R + + MD+ Y+ Sbjct: 206 DFN---DWLGQADRLFHDHLGLQEVFRETHGRYAR-------SFPAWMPFLPMDRIYYRG 255 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L S + + + LSDH P++ + Sbjct: 256 LTPVSCERLSH------APWHVLSDHAPLTASFTL 284 >gi|291533503|emb|CBL06616.1| exodeoxyribonuclease III (xth) [Megamonas hypermegale ART12/1] Length = 151 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 11/49 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 IDYF++ ++ + + + SDHCP+S++ D Sbjct: 113 WRIDYFIVSKDIETNIKEAGIHNEFFG-----------SDHCPVSLELD 150 >gi|254228998|ref|ZP_04922419.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262394738|ref|YP_003286592.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|151938466|gb|EDN57303.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262338332|gb|ACY52127.1| exodeoxyribonuclease III [Vibrio sp. Ex25] Length = 268 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 77/275 (28%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQALIDKHQPDVIGLQEI-------KVHDEA---FPIEAVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ +Q+ +P + R + + NG+K+ VL+ + D++ Sbjct: 67 MLCKQEPLHVQKGFPTDNEEHQK-----RMIMATFLNENGEKVTVLNGYFPQG---DNIS 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q + L ++ S ++ GD N I N W Sbjct: 119 HETKFP---YKRQFYKDLMTYLNDHHNSDEQLIVMGDINISPIDADIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L ++ + N + ID + Sbjct: 176 GKCSFQPEEREWLKTLLDWGFEDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + I D ++ SDH PI Sbjct: 236 PSLAQKCIDSGI-------DYELRGIEKPSDHAPI 263 >gi|165870022|ref|ZP_02214679.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|190569230|ref|ZP_03022126.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227817848|ref|YP_002817857.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. CDC 684] gi|164714345|gb|EDR19865.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|190559670|gb|EDV13659.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227003998|gb|ACP13741.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] Length = 335 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 105/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 33 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 92 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------- 123 LQE+ ++ + F N S + + + + Sbjct: 93 LQEVD-IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 150 Query: 124 ------LQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 + + L G + R +R VE + NGK + ++++HL + D Sbjct: 151 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA---YDEGG 207 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 208 KIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 260 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 261 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 311 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 312 NVQGKDLKFEN---SDHNPVS 329 >gi|30265117|ref|NP_847494.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47778386|ref|YP_021976.2| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187928|ref|YP_031181.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|167636557|ref|ZP_02394852.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|167641786|ref|ZP_02400028.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170689357|ref|ZP_02880550.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|170709101|ref|ZP_02899529.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|177655394|ref|ZP_02936892.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|229601351|ref|YP_002869310.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|254686481|ref|ZP_05150340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|254735688|ref|ZP_05193395.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254744226|ref|ZP_05201906.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|254750980|ref|ZP_05203019.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254756978|ref|ZP_05209006.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|30259794|gb|AAP28980.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47552091|gb|AAT34451.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. 'Ames Ancestor'] gi|49181855|gb|AAT57231.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. Sterne] gi|167510269|gb|EDR85673.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|167528030|gb|EDR90833.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|170126003|gb|EDS94902.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|170666653|gb|EDT17423.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|172080145|gb|EDT65239.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|229265759|gb|ACQ47396.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 352 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 105/321 (32%), Gaps = 64/321 (19%) Query: 19 SVAQKVRLVSWNINTLSEQEGVSLWKNSV--------KRTTSDYTLLRQYAKNLDADIVF 70 + + ++ ++NI + + + ++T ++ + + +N ++D Sbjct: 50 ATGNEFKVTTFNIGYAGLDKDQDFFMDGGKGSGSSSKEQTETNLKNMLSFLQNENSDFAL 109 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRV------- 123 LQE+ ++ + F N S + + + + Sbjct: 110 LQEVD-IKSL-RSFDVNGHEFLKKGLPDYVSSFGKNYDTKWVPVPITNPMGYAEAGLSTF 167 Query: 124 ------LQQSYPLLGAKDSFSR--AGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLE 174 + + L G + R +R VE + NGK + ++++HL + D Sbjct: 168 SKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHSIPVNNGKHVRLVNLHLSA---YDEGG 224 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 QQ ++LK+++ + ++ ++ GD+N+ ++ + +D + P + Sbjct: 225 KIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDWNQLVSDVQLSDPKFVKERPEWLV 277 Query: 235 IRFPKEKDSRCN-------------ANKN---LRNKIPIDYFVMDQNAYKFLIQESFSEI 278 D K ID F++ N + Sbjct: 278 ELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN---------VEIV 328 Query: 279 LYNEDDIKSRGKRLSDHCPIS 299 D+K SDH P+S Sbjct: 329 NVQGKDLKFEN---SDHNPVS 346 >gi|296225531|ref|XP_002758535.1| PREDICTED: deoxyribonuclease gamma-like isoform 2 [Callithrix jacchus] Length = 275 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 152 ENFIFMGDFNAGCSYVPKKAWKNIRLRIDPRFVWLIGDQEDT----TVKKSTNCA----- 202 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + S K L SDH P+ Sbjct: 203 -----YDRIVLRGQEIVSSIVPKSTSVFDFQKAYKLSEEKALDVSDHFPVEFKL 251 >gi|229141809|ref|ZP_04270337.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|228641645|gb|EEK97948.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 352 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 38/164 (23%) Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NGK + ++++HL + D QQ ++LK+++ + ++ ++ GD+ Sbjct: 205 NNGKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDW 254 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKI 255 N+ ++ + +D + P + D K Sbjct: 255 NQLVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVT 314 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F++ N + D+K SDH P+S Sbjct: 315 IIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|229158676|ref|ZP_04286734.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228624660|gb|EEK81429.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 352 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 38/164 (23%) Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NGK + ++++HL + D QQ ++LK+++ + ++ ++ GD+ Sbjct: 205 NNGKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDW 254 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKI 255 N+ ++ + +D + P + D K Sbjct: 255 NQLVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVT 314 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F++ N + D+K SDH P+S Sbjct: 315 IIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 346 >gi|65317062|ref|ZP_00390021.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012] Length = 227 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 38/164 (23%) Query: 152 INGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDF 211 NGK + ++++HL + D QQ ++LK+++ + ++ ++ GD+ Sbjct: 80 NNGKHVRLVNLHLSA---YDEGGKIR-------KQQVEFLKEYMNKHYKNGDYVIMGGDW 129 Query: 212 NRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN-------------ANKN---LRNKI 255 N+ ++ + +D + P + D K Sbjct: 130 NQLVSDVQLSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVT 189 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPIS 299 ID F++ N + D+K SDH P+S Sbjct: 190 IIDGFIVSPN---------VEIVNVQGKDLKFEN---SDHNPVS 221 >gi|328781916|ref|XP_396184.4| PREDICTED: inositol polyphosphate 5-phosphatase OCRL-1-like [Apis mellifera] Length = 859 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 36/208 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVF--LQEMG-SYNA 79 ++ + +WN+N G + R S D+ QE+ + A Sbjct: 211 RIFIGTWNVN------GQPPNGIKLHRWLS--------YDKTPPDVYAIGFQELDLTKEA 256 Query: 80 VAKVFPKN----TWCIFYSTERLINHSKRDSNNDIHTA-----IAVRKKNVRVLQQSYPL 130 +F W + N A+ + S Sbjct: 257 F--LFNDTPREEEWRQVVAKSLHPNGIYEQVAIVRLVGMMLLIYALHNHVPYIKDVSVDT 314 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN-TYSPSCSLLSQQAQ 189 +G + GN+ V + I+ I ++ HL + C N Y+ C+ LS Sbjct: 315 VGT-GIMGKMGNKGGVAVSCSIHNTSICFVNAHLAAHCEEYERRNQDYADICARLSF--- 370 Query: 190 WLKDWITQKKESLVPFVI-AGDFNRKIN 216 ++ K + GD N +I Sbjct: 371 --TKYVPPKNFKDHDQIYWLGDLNYRIT 396 >gi|91225244|ref|ZP_01260412.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] gi|91189883|gb|EAS76155.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] Length = 268 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQALIDKHQPDVIGLQEI-------KVHDEA---FPIEAVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ +Q+ +P + R + + NG+K+ VL+ + D++ Sbjct: 67 MLCKQEPLHVQKGFPTDNEEHQK-----RMIMATFLNENGEKVTVLNGYFPQG---DNIS 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q + L ++ + ++ GD N I N W Sbjct: 119 HETKFP---YKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L + + N + ID + Sbjct: 176 GKCSFQPEEREWLKTLLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + I+ D ++ SDH PI Sbjct: 236 PSLAEKCIESGI-------DYELRGIEKPSDHAPI 263 >gi|261252552|ref|ZP_05945125.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] gi|260935943|gb|EEX91932.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] Length = 268 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 78/275 (28%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPLEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P R + L + NG+K+ VL+ + D++ Sbjct: 67 MLCKKEPLSVQKGFPTDNEDHQK-----RMIMVTLEDDNGEKVTVLNGYFPQG---DNIG 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q L ++ + ++ GD N I N W Sbjct: 119 HETKFP---YKRQFYSDLMTYLNDHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L + + + + N R ID + Sbjct: 176 GKCSFQPEEREWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + I+ + D ++ SDH PI Sbjct: 236 PKLAEKCIES-------DVDYELRGIEKPSDHAPI 263 >gi|16272016|ref|NP_438214.1| exonuclease III [Haemophilus influenzae Rd KW20] gi|145636755|ref|ZP_01792421.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260580655|ref|ZP_05848482.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] gi|1169570|sp|P44318|EX3_HAEIN RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III gi|1572987|gb|AAC21719.1| exodeoxyribonuclease III (xthA) [Haemophilus influenzae Rd KW20] gi|145270053|gb|EDK09990.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260092717|gb|EEW76653.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] Length = 267 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 92/308 (29%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGLRARPH----------------QLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +F H +A + K+ +V+++ +P +D+ R Sbjct: 45 EITENLGYHVF------------HHGQKGHYGVALLTKQEPKVIRRGFPT-DNEDAQKR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +++ + +L + + F + + L+ ++ ++ + Sbjct: 91 -------IIMADLETEFGLLTV--INGYFPQGESRAHETKFPAKEKFYADLQQYLEKEHD 141 Query: 201 SLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSR 244 P +I GD N I N W L ++ + Sbjct: 142 KSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRK 201 Query: 245 CNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N N + ID+ ++ Q + + + + + Sbjct: 202 LNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDIRAME------- 254 Query: 291 RLSDHCPI 298 + SDH PI Sbjct: 255 KPSDHAPI 262 >gi|323494946|ref|ZP_08100037.1| exonuclease III [Vibrio brasiliensis LMG 20546] gi|323310741|gb|EGA63914.1| exonuclease III [Vibrio brasiliensis LMG 20546] Length = 268 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 78/275 (28%), Gaps = 60/275 (21%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQAVIDKHQPDVIGLQEI-------KVHDEA---FPLEDVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + KK +Q+ +P R + + + NG+K+ +L+ + D++ Sbjct: 67 MLCKKEPISVQKGFPTDNEDHQK-----RMIMVTVEDDNGEKVTILNGYFPQG---DNIN 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTI 228 + +Q L ++ + ++ GD N I N W Sbjct: 119 HETKFP---YKRQFYSDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKT 175 Query: 229 DP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVMD 263 L + + + + N R ID + Sbjct: 176 GKCSFQPEERQWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLAT 235 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + I+ + D ++ SDH PI Sbjct: 236 PKLAEKCIES-------DVDYELRGIEKPSDHAPI 263 >gi|123223481|emb|CAM21423.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 246 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQE 47 >gi|26348875|dbj|BAC38077.1| unnamed protein product [Mus musculus] Length = 260 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQE 47 >gi|20071198|gb|AAH26769.1| Apex2 protein [Mus musculus] Length = 246 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQE 47 >gi|26349295|dbj|BAC38287.1| unnamed protein product [Mus musculus] gi|123223483|emb|CAM21425.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|123230064|emb|CAM15344.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 260 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQE 47 >gi|26333609|dbj|BAC30522.1| unnamed protein product [Mus musculus] gi|123223482|emb|CAM21424.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|123230063|emb|CAM15343.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 266 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 24 VRLVSWNINTLSEQ-EGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+VSWNIN + +G++ + S T LR+ LDADIV LQE Sbjct: 2 LRVVSWNINGIRSPLQGLACQEPSSCPT-----ALRRVLDELDADIVCLQE 47 >gi|302537936|ref|ZP_07290278.1| sphingomyelin phosphodiesterase [Streptomyces sp. C] gi|302446831|gb|EFL18647.1| sphingomyelin phosphodiesterase [Streptomyces sp. C] Length = 329 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 81/267 (30%), Gaps = 53/267 (19%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYST----------ERLINHSKRDSNNDIHTAIAV 116 D+V LQE A + + Y T + + D I Sbjct: 80 DVVVLQEAFDNGASDALQANASAQYPYQTPVVGRSKSGWDATGGSYSTTTPEDGGVTILS 139 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FCFLDSL 173 + +R Q Y D +S G +++ +NG K+ V+ H +S C Sbjct: 140 KWPILRKEQVVYKDACGADWWSNKGF---AYVVLNVNGTKVHVVGTHAQSTDPGCGAGEA 196 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFNRKINYLGNNDDFW-KTIDPN 231 S +Q + + ++ K + ++AGD N + Sbjct: 197 AQMRS-------RQFKNIDAFLDAKNIPANEQVIVAGDMNVDSRTPEYASMLADADLAGA 249 Query: 232 DSLIRFPKEKDSRCNANKNLRN----KIPIDYF---------------VMDQNAYKFLIQ 272 D+ P D+ N+ N R + +DY V+ + + + + Sbjct: 250 DTRTGHPYSFDTAQNSIANYRYPTDPREDLDYVLYRKANARPAGWENNVVKEQSTPWTVS 309 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPIS 299 Y+ LSDH P+ Sbjct: 310 SWGKSYTYSN---------LSDHYPVI 327 >gi|126335204|ref|XP_001363714.1| PREDICTED: similar to reverse transcriptase/ribonuclease H/putative methyltransferase [Monodelphis domestica] Length = 282 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 7/105 (6%) Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 ++ + GDFN +Y+ + + + + + + D Sbjct: 181 NMEDIMFMGDFNADCSYVTPSQWPSIRLRTSSTFQWLIPDTADTTVTPTDCAY----DRI 236 Query: 261 VMDQNA-YKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 V+ ++ S + + S G L SDH P+ + Sbjct: 237 VVSGRKLQSAIVPGSATIFDFQAAYNLSSGIALAISDHYPVEVTL 281 >gi|327265943|ref|XP_003217767.1| PREDICTED: deoxyribonuclease gamma-like [Anolis carolinensis] Length = 305 Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 7/111 (6%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 I Q +S F+ GDFN Y+ + ++ I ++ Sbjct: 170 IKQHWKS-ENFIFMGDFNAGCGYVARRHWKDIRLRNHNEFIWLIDDQTDTTVKASTH--- 225 Query: 255 IPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 P D V+ + S + + + + L SDH P+ Sbjct: 226 CPYDRIVLHGDKLINAAVPNSANIFDFQGVFAMTEAQALAVSDHFPVEFQL 276 >gi|190892451|ref|YP_001978993.1| endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CIAT 652] gi|190697730|gb|ACE91815.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CIAT 652] Length = 369 Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 82/294 (27%), Gaps = 59/294 (20%) Query: 70 FLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHS------KRDSNNDIHTAIA 115 LQE+ + A+ ++ F + ++ + + Sbjct: 75 CLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLMREETRDGQRIELK 134 Query: 116 VRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + + + L + R +EL + I G+ + + +H KS Sbjct: 135 DIRSHAMTTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPLSLYVVHFKSMGNP 194 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-----------RKI 215 + + L +A+ ++ I + + F I GD N R Sbjct: 195 RDGLDGRQSTLPLRRAEARAVRRIIEHRFGAGHTAKKSFAICGDMNDYQERVDVVGRRGA 254 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----------NKNLRNKIPIDYFVMDQN 265 Y + ++ S F + +R ++ +DY + Sbjct: 255 GYRFEHQPEAESALDVFSHDGFVENVMARRQPLDRWTLYHARGPQEQHLCQLDYIWLSPA 314 Query: 266 AYK---------FLIQESFSEILYNEDDIKSR------GKRLSDHCPISIDYDF 304 + + + +++ + SDHCP+ + D Sbjct: 315 LAAHNSGRLPEIIRKGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDL 368 >gi|288800479|ref|ZP_06405937.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332692|gb|EFC71172.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 363 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 85/306 (27%), Gaps = 79/306 (25%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++++S+NI R + QY N ADIV LQE Sbjct: 98 GSLKVLSYNIQ------SFGYEPEDETRDEQ--NPIVQYIANSGADIVCLQE-------- 141 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 W I +N + H +V L YP++ + + Sbjct: 142 ----APKWRIENEVVSTLNPIYPYQSEVAHET----SGDVLALYSKYPIISTERIPFDSE 193 Query: 142 NRRAVELLVEINGKKIWVLDIHL---------KSFCFLDSLENTYSPS------------ 180 +V ++++ I V++ HL K+ F + ++ S S Sbjct: 194 INLSVAYRIKVDNDTILVVNNHLESNKMTKADKAG-FKNMVKGNISNSGTKQESSLLLNK 252 Query: 181 ----CSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR 236 + Q + + + + + ++ GDFN N T+ Sbjct: 253 LALAAQKRAVQVKAVVSVLKKYENLPQ--IVCGDFN-----EWPNGYALNTLQKT----- 300 Query: 237 FPKEKDSRCNANKNLRNKI----PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 N ++ ID + + Y + Sbjct: 301 LTNSFVETGNGAGWSYHRSGMYVRIDNILCSKQFK-----------PYKAKV--DSEIKT 347 Query: 293 SDHCPI 298 SDH PI Sbjct: 348 SDHYPI 353 >gi|66808471|ref|XP_637958.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4] gi|60466398|gb|EAL64454.1| hypothetical protein DDB_G0285991 [Dictyostelium discoideum AX4] Length = 316 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 28/127 (22%) Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI-----------------RFPKEKDSR 244 +P ++ GDFN + TID N ++ F + + Sbjct: 193 QIPLILVGDFNSNDYQKPIENLISSTIDINFAIKYIQLLEIPIRDDIAFQTLFNTKTIAN 252 Query: 245 CNANKNLR-------NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 C + IDY ++ + ++F + + SDH P Sbjct: 253 CKIGPDSTFTGFDCAYSETIDYIFIN----QQFKAKTFVVFNNHPSKVTKNSTIASDHFP 308 Query: 298 ISIDYDF 304 I D F Sbjct: 309 IVADLKF 315 >gi|322701550|gb|EFY93299.1| SacI domain and endonuclease/exonuclease/phosphatase [Metarhizium acridum CQMa 102] Length = 1335 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 80/277 (28%), Gaps = 69/277 (24%) Query: 68 IVFLQE---------MGS--------YNAVAKVF-------PKNTWCIFYSTERLINHSK 103 +V QE M S AV + + + + S + + Sbjct: 682 VVAFQEIVELSPQQIMNSDPSRKHLWEEAVKRTLNDRQARLGGDRYVLLRSGQLVGAALC 741 Query: 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIH 163 I V+ ++ ++ + AGN+ AV + + +I + H Sbjct: 742 ----------IFVKTSVLKNIKNVEGSVKKTGLSGMAGNKGAVAIRFDYANTQICFVTAH 791 Query: 164 LKSF-CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGN- 220 L + D Y+ L Q + +I GDFN +I Sbjct: 792 LAAGFSNYDERNRDYTTIHHGLRFQ--------RNRGIEDHDAIIWMGDFNYRIGLGLET 843 Query: 221 -----NDDFWKTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNA-- 266 +T+ ND L FP ++R N + + D + + A Sbjct: 844 AKALVKKQDLETLYENDQLNLQMVAGLSFPFYSEARINFMPTYKFDVGSDTYDSSEKARI 903 Query: 267 -----YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + Y+ +K SDH P+ Sbjct: 904 PAWTDRILRKGANLRQTSYDSAPLK-----FSDHRPV 935 >gi|160872637|ref|ZP_02062769.1| putative endonuclease/exonuclease/phophatase family protein [Rickettsiella grylli] gi|159121436|gb|EDP46774.1| putative endonuclease/exonuclease/phophatase family protein [Rickettsiella grylli] Length = 509 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 19/192 (9%) Query: 23 KVRLVSWNIN-TLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 ++ + ++N+ + + R L Y D+V L+E+ Sbjct: 214 QLTIGTYNVQLWPFYAKVAMRMNEAKMRAQLIPLNLTHY------DVVVLEELMDKKYRN 267 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V Y ++H+ I++ + KK+ + Q+ Sbjct: 268 EVSTLMRRDYPYQYGPTMDHAPLSGGTVIYSHWPILKKDSLIYQECN-------QVDCGA 320 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT-QKKE 200 + A+ + ++ + HL++ +T + +Q L+ +I QK Sbjct: 321 AKGALYIKIKKGNVIYNIFGTHLQA----TEGAHTAARDEVARDKQFNHLRQFIKKQKIN 376 Query: 201 SLVPFVIAGDFN 212 +IAGD N Sbjct: 377 KNQAVIIAGDLN 388 >gi|126438983|ref|YP_001059231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|126218476|gb|ABN81982.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] Length = 286 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 62/313 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +RL+SWN+ + G +V R D+ D++ QE+ Sbjct: 1 MRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQELTRGFHAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQS 127 Y +A + P + +F + + + + A+A R R L+ + Sbjct: 49 PGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHA 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + + R A+E+ + + V+ HL+ + + L ++ Sbjct: 107 LPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVDALRRLHRE 162 Query: 188 AQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 A + PF ++ GDFN +D + + + P RF Sbjct: 163 AAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYRRFLAPFPDAPRFV 218 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------ 292 SR + K + + ++ + + D + R R Sbjct: 219 DAWLSR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLSRCEIDGTV 271 Query: 293 --SDHCPISIDYD 303 SDH PI ++ Sbjct: 272 RASDHQPIVLELS 284 >gi|145633402|ref|ZP_01789132.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145635225|ref|ZP_01790929.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229845387|ref|ZP_04465518.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|229846960|ref|ZP_04467066.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|144985965|gb|EDJ92567.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145267504|gb|EDK07504.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229810044|gb|EEP45764.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|229811695|gb|EEP47393.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|309972825|gb|ADO96026.1| Exodeoxyribonuclease III [Haemophilus influenzae R2846] Length = 267 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 92/308 (29%), Gaps = 79/308 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + Sbjct: 1 MKFISFNINGLRARPH----------------QLEAIIEKYQPDVIGLQEIKVADEAFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 ++ + +F H +A + K+ +V+++ +P +D+ R Sbjct: 45 EITENLGYHVF------------HHGQKGHYGVALLTKQEPKVVRRGFPT-DNEDAQKR- 90 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 +++ + +L + + F + + L+ ++ ++ + Sbjct: 91 -------IIMADLETEFGLLTV--INGYFPQGESRAHETKFPAKEKFYADLQQYLEKEHD 141 Query: 201 SLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLI-----------RFPKEKDSR 244 P +I GD N I N W L ++ + Sbjct: 142 KSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFRK 201 Query: 245 CNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK 290 N N + ID+ ++ Q + + + + + Sbjct: 202 LNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDIRAME------- 254 Query: 291 RLSDHCPI 298 + SDH PI Sbjct: 255 KPSDHAPI 262 >gi|291234355|ref|XP_002737116.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 443 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 99/313 (31%), Gaps = 73/313 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NA 79 Q +R+ ++N+ + K V +L + DI+ +QE+ A Sbjct: 26 QPLRIAAFNVQ---VFGVSKMSKPMVP------EILTKIILRY--DIILIQEVRDSTGQA 74 Query: 80 VA----KVFPKN---------------------TWCIFYSTERLINHSKRDSNNDIHTAI 114 + +V + + + S + SK A Sbjct: 75 IQDLLYRVNTADALEKQQDASCDAEKSCDNIDGDFDMVISERLGRSSSKEQ------YAY 128 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE---INGKKIWVLDIHLK---SFC 168 RK V V + G ++ + R + + K + IH K + Sbjct: 129 IYRKSRVSVTDSYHYDDGLEEDSTDHYEREPFIVRFHSPFTDVKDFAIGGIHTKPDDAVS 188 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 +D L + Y +K W SL +IAGD+N +Y+ ++D + Sbjct: 189 EIDRLADVYDD----------IVKRW------SLEDVLIAGDYNAACSYVKSDDWKNIRL 232 Query: 229 DPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLI-QESFSEILYNEDD--I 285 + + + A D V+ + K + S E L++++ Sbjct: 233 RSQERFLWLIADNVDTNVAGDICAY----DRLVVGGDLMKRAVWPGSAREFLFDKEYGLT 288 Query: 286 KSRGKRLSDHCPI 298 + +SDH P+ Sbjct: 289 DEQTSEVSDHYPV 301 >gi|283778819|ref|YP_003369574.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437272|gb|ADB15714.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 517 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 11/67 (16%) Query: 9 LVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADI 68 ++ +P A +R++S+NI + K + R L + +++ D+ Sbjct: 264 IIVAKLPSQAVAPITLRVLSYNI----HHGEGNDRKLDLPR-------LAKIITSVNPDL 312 Query: 69 VFLQEMG 75 V LQE+ Sbjct: 313 VLLQEVD 319 >gi|229009858|ref|ZP_04167078.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228751476|gb|EEM01282.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 263 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 27/180 (15%) Query: 54 YTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIF----YSTERLINHSKR----- 104 L + + D D++ LQE+ V F R +N + Sbjct: 20 IKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGLLLLEELRALNVKEYNIIWD 79 Query: 105 --DSNNDIH-TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLD 161 D++ +A+ K+ V + ++ + KD+ R+ V + N K I Sbjct: 80 FSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTY-WKTRKIVSATIAYNDKNITFYS 138 Query: 162 IHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN 221 H + D E+ Q L ++ S + GDFN G Sbjct: 139 CHF--GWWNDEEES--------FKDQVDRL----MERVNSNELSFLMGDFNNNARLEGEG 184 >gi|76808611|ref|YP_333756.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|237812555|ref|YP_002897006.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] gi|254179545|ref|ZP_04886144.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|254189064|ref|ZP_04895575.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|76578064|gb|ABA47539.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1710b] gi|157936743|gb|EDO92413.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|184210085|gb|EDU07128.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|237503102|gb|ACQ95420.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] Length = 286 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 62/313 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +RL+SWN+ + G +V R D+ D++ QE+ Sbjct: 1 MRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQELTRGFHAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQS 127 Y +A + P + +F + + + + A+A R R L+ + Sbjct: 49 PGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHA 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + + R A+E+ + + V+ HL+ + + L ++ Sbjct: 107 LPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVDALRRLHRE 162 Query: 188 AQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 A + PF ++ GDFN +D + + + P RF Sbjct: 163 AAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYQRFLAPFPDAPRFV 218 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------ 292 +R + K + + ++ + + D + R R Sbjct: 219 DAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLSRCEIDGTV 271 Query: 293 --SDHCPISIDYD 303 SDH PI ++ Sbjct: 272 RASDHQPIVLELS 284 >gi|170782608|ref|YP_001710942.1| hypothetical protein CMS_2268 [Clavibacter michiganensis subsp. sepedonicus] gi|169157178|emb|CAQ02359.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 273 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 90/287 (31%), Gaps = 33/287 (11%) Query: 18 ASVAQKVRLVSWN--INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 + + L+S N + +EG + + +L ++ + ++ +QE Sbjct: 7 PTTGDDIHLISLNVRMPWHGTREGEADHWPERQ------EVLTRFLQQERPTVLGVQEAL 60 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 A+ K P + + + +H + + + + + + +V L P + Sbjct: 61 WPQIQAIEKALPPS-YRMVGQGREGGSHGEHGAIFYQASRLTLLEHDVMWLS-DTPDVIG 118 Query: 134 KDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ R + G + VLD HL + Sbjct: 119 SMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAE------------AI 166 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + +P V+ GDFN ++ D + DS + + Sbjct: 167 AELVRTRFA-GLPLVLMGDFNAPVDSF-PYDALTRRAGLRDS-WLDTARQATPAF-GTFP 222 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + P V L+ E +D RG+ +SDH P+ Sbjct: 223 DYRPP---VVGAPRIDWILVSERVDVRAAAVNDFTWRGRMMSDHLPV 266 >gi|70733598|ref|YP_257238.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68347897|gb|AAY95503.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 292 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 76/309 (24%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNS------VKRTTSDYTLLRQYAKNL-D 65 L ++RL+S+NI E + +D L++ L D Sbjct: 22 LASSGLPADSRLRLLSFNIQVGISTERYRHYLTRGWQHLLPHHGRAD--NLQKIGNLLGD 79 Query: 66 ADIVFLQE----------MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 D+V LQE + +A++ W + R + + SN Sbjct: 80 FDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYW--YQQLNRNLGRLAQHSN-------G 130 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLEN 175 V + + +PL G R A+ + + + V+ +HL Sbjct: 131 VLSRLRPWAIEDHPLPG-------PKGRGAILVRFGEGPEALVVVMMHLALGA------- 176 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 ++Q +I + V+ GD N + L + + + + Sbjct: 177 ------RTRTRQL----AYIRELIGGYKHQVLMGDMNTHASDLLEHSPL-RDLSLLAPQL 225 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + + R + +D+ ++ + + ++ + +SDH Sbjct: 226 QAT---------FPSWRPQRCLDHILLSPS--------------LTLERVEVLAQPISDH 262 Query: 296 CPISIDYDF 304 P++++ Sbjct: 263 LPVAVEIRL 271 >gi|121601098|ref|YP_993160.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei SAVP1] gi|121229908|gb|ABM52426.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei SAVP1] Length = 286 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 62/313 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +RL+SWN+ + G +V R D+ D++ QE+ Sbjct: 1 MRLISWNVQWRRDANGTVDLARTVDAARGLGDF------------DVLCAQELTRGFHAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQS 127 Y +A + P + +F + + + + A+A R R L+ + Sbjct: 49 PGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHA 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + + R A+E+ + + V+ HL+ + + L ++ Sbjct: 107 LPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVDALRRLHRE 162 Query: 188 AQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 A + PF ++ GDFN +D + + + P RF Sbjct: 163 AAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYRRFLAPFPDAPRFV 218 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------ 292 +R + K + + ++ + + D + R R Sbjct: 219 DAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLSRCEIDGTV 271 Query: 293 --SDHCPISIDYD 303 SDH PI ++ Sbjct: 272 RASDHQPIVLELS 284 >gi|53719141|ref|YP_108127.1| hypothetical protein BPSL1507 [Burkholderia pseudomallei K96243] gi|67639890|ref|ZP_00438719.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|124383859|ref|YP_001026065.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10229] gi|126449985|ref|YP_001080667.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|126454152|ref|YP_001066498.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|134277293|ref|ZP_01764008.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|167002249|ref|ZP_02268039.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] gi|167845399|ref|ZP_02470907.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei B7210] gi|167902390|ref|ZP_02489595.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei NCTC 13177] gi|167910632|ref|ZP_02497723.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 112] gi|217421528|ref|ZP_03453032.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|226197165|ref|ZP_03792742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|254178197|ref|ZP_04884852.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|254197468|ref|ZP_04903890.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|254199957|ref|ZP_04906323.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254206290|ref|ZP_04912642.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|254297422|ref|ZP_04964875.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|254358295|ref|ZP_04974568.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|52209555|emb|CAH35508.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|124291879|gb|ABN01148.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10229] gi|126227794|gb|ABN91334.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|126242855|gb|ABO05948.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10247] gi|134250943|gb|EBA51022.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|147749553|gb|EDK56627.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147753733|gb|EDK60798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|148027422|gb|EDK85443.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|157807264|gb|EDO84434.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|160699236|gb|EDP89206.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|169654209|gb|EDS86902.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|217395270|gb|EEC35288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|225930544|gb|EEH26554.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|238520501|gb|EEP83960.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|243062066|gb|EES44252.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] Length = 286 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 62/313 (19%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVK--RTTSDYTLLRQYAKNLDADIVFLQEM------- 74 +RL+SWN+ + G +V R D+ D++ QE+ Sbjct: 1 MRLISWNVQWGRDANGTVDLARTVDAARGLGDF------------DVLCAQELTRGFHAL 48 Query: 75 ------GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIH-TAIAVRKKNVRVLQQS 127 Y +A + P + +F + + + + A+A R R L+ + Sbjct: 49 PGGPSGDQYAELAALLPG--YAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHA 106 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ 187 P + + + + R A+E+ + + V+ HL+ + + L ++ Sbjct: 107 LPWPAS--AAAPSMPRCALEVTLRAPFGPLRVVVTHLEY--YSAQQRLAQVDALRRLHRE 162 Query: 188 AQWLKDWITQKKESLVPF---------VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP 238 A + PF ++ GDFN +D + + + P RF Sbjct: 163 AAAHARASAPPETPASPFAPSARAADAIVCGDFN----SAYRSDAYRRFLAPFPDAPRFV 218 Query: 239 KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL------ 292 +R + K + + ++ + + D + R R Sbjct: 219 DAWLAR-HPGKTPPMTAGVY------DTAQWSEGPMTCDFAFVTDTLVRRLSRCEIDGTV 271 Query: 293 --SDHCPISIDYD 303 SDH PI ++ Sbjct: 272 RASDHQPIVLELS 284 >gi|328954136|ref|YP_004371470.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] gi|328454460|gb|AEB10289.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] Length = 253 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 91/283 (32%), Gaps = 32/283 (11%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R++++N+ + +G + WK R + Y D++ QE+ Sbjct: 1 MRIMTFNLRFQNPLDGPNQWKF---RKELVLETIWAY----QPDLLAAQEVTIPQLDYLA 53 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 + F + + + I N L ++ P + S+ A R Sbjct: 54 ANLTGYEPFIKHRNIDLTCQYPTIFFRSQTIVAGAGNEFWLSET-PEVHRSKSWESAFPR 112 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQ--AQWLKDWITQKKES 201 + +W FCF D+ + S L++Q A L+++ Q Sbjct: 113 MVTYGSFREVDRDLW--------FCFADTHLDHVSA----LARQKAATMLREFFLQ---L 157 Query: 202 LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFV 261 P ++AGDFN + + DS R E + ++K D Sbjct: 158 NQPAILAGDFN-----DHPQSSVHRVLARGDSPFRDSWEVLGHFEEGVSTQHKF--DGEF 210 Query: 262 MDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 LI E F + SDH P ++ ++ Sbjct: 211 FGGRIDWILITEPFRLKAAEIITYNQAKQYPSDHFPYYVEVNY 253 >gi|325962565|ref|YP_004240471.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] gi|323468652|gb|ADX72337.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] Length = 273 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 15/80 (18%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+ S N+N L + R DI+ LQE+ + +A+ + Sbjct: 6 LRIASVNVNGLRAAFKNGMAAWLEPREV---------------DILCLQEVRAPDAIVRQ 50 Query: 84 FPKNTWCIFYSTERLINHSK 103 + W I +S + Sbjct: 51 LLGDGWHILHSEAEAKGRAG 70 >gi|301095100|ref|XP_002896652.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108882|gb|EEY66934.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 806 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 105/318 (33%), Gaps = 49/318 (15%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAK 82 K+R++ +N+ L S + + + + + +L+ D+V E +A K Sbjct: 502 KLRVMVYNV-WLLPGFVSSFNEKVSPWASQRASAIPRCLASLNVDVVVFCEAFCSSAREK 560 Query: 83 VFPKNTWC-IFYSTERLINHSKRDSNNDIHTA-IAVRK-----------KNVRVLQQSYP 129 + Y T+ + + S S I A+ K NV + Y Sbjct: 561 LVSGMKSQGFIYETKIVGDVSLLSSKKAIDGGCFAMSKYPLSNCEEVTFGNVASGEDRYA 620 Query: 130 LLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 G R + + + ++ HL++ + SL L + Sbjct: 621 DKGVIYFQVRVPVKSYSG---SDTTQTVHIVGTHLQA--WETSLAVATRKGQMTLMRNFV 675 Query: 190 WLKDWITQKKESLVPFVIAGDFNRK----------------INYLGNNDDFWKTIDPNDS 233 + + P + AGD N ++ LG ++ + P S Sbjct: 676 N-----SLRLPKHEPVIYAGDMNVNKHADGAQIPEGEYTGMLDLLGVDEPQLQEKSPIYS 730 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQES-FSEILYNEDDIKSRGK-- 290 + ++ + + +DY ++D++ + + ++ ++ SRG Sbjct: 731 FDPHSNDLAVDGPSSGGIAER--LDYVMVDRSHRLPVSASTEIVQLKATKNWAPSRGAID 788 Query: 291 ----RLSDHCPISIDYDF 304 LSDH P+ D+ F Sbjct: 789 EILVDLSDHYPVVGDFHF 806 >gi|254823077|ref|ZP_05228078.1| hypothetical protein MintA_24325 [Mycobacterium intracellulare ATCC 13950] Length = 254 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 11/52 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 +R+ ++NI D LR + LD D++ LQE+ Sbjct: 1 MRVATFNILHGRTVG-----------DGVDVARLRDCVRRLDPDVLSLQEVD 41 >gi|78187058|ref|YP_375101.1| hypothetical protein Plut_1196 [Chlorobium luteolum DSM 273] gi|78166960|gb|ABB24058.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 348 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 73/284 (25%), Gaps = 68/284 (23%) Query: 22 QKVRLVSWNINTL---SEQEGVSLWKNSVKR------------------------TTSDY 54 + + L+ WN+ L ++ G+S + + + T DY Sbjct: 32 ESLLLLWWNVENLFDTTDDPGISDEEFTPEGRLHWTPKKLLLKEMRIAYVMKAIATHPDY 91 Query: 55 TLLRQYAKNLDADIVFLQEMGSYNAVAKV---FPKNTWCIFYSTERLINHSKRDSNNDIH 111 L ++ E+ + + + Y + I Sbjct: 92 GQL--------PAVLAFAEVENGAVFRRALQKIKGARYRALYHDSPDL--------RGID 135 Query: 112 TAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLV---EINGKKIWVLDIHLKSFC 168 A+A + G K R +++V + G+ ++ H S Sbjct: 136 IALAY-------DPERLDFTGMKTYSVPQDGRPTRDIIVAGFKNRGRPFTLILNHWPSRA 188 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTI 228 F +L +++ + + ++ GDFN T+ Sbjct: 189 FGSALTEKK----RIMAARVARAAADSLLLQNPDADIIVMGDFNDSPQDRSVRRTLRGTL 244 Query: 229 DPNDSLIRFPKEKDSRCNANKNLR-------NKIPIDYFVMDQN 265 + R C + ID ++ + Sbjct: 245 NR-LQAQRAKDGTLYNCWGGSSQPGSYSYRGRWERIDQILVSKG 287 >gi|291298430|ref|YP_003509708.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567650|gb|ADD40615.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 289 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 77/279 (27%), Gaps = 40/279 (14%) Query: 30 NINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTW 89 N L ++ + D + + + L+ D++ LQE+ + + + W Sbjct: 47 NDKWLRA-ASFNIHHGASPDDVLDLERIARRIEALNVDVIGLQEVDRFWKRSDHVDQPAW 105 Query: 90 CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA---GNRRA- 145 S ++ + + R++ + +P+ ++ R Sbjct: 106 ---LSRRLGLHVAFGLNELRRSDGAGRRREYGTAILSRWPIRETRNVALPRWDDHARHGL 162 Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 + +++ G + HL + + ++ Sbjct: 163 LRTEIDMPGGSLSFATTHLIHAHHDEERAAQAKAVAKQFAD---------DARRS----- 208 Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 V+ GDFN N + + + + + IDY ++ Sbjct: 209 VVVGDFN-----DEPNTPAIAAMTRRFTDAWAVAGSGKGYSYSSTKPKR-RIDYVFGSED 262 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + R SDH PI +++ Sbjct: 263 ------------LEPRAMTVDDTDPRASDHLPILTEFEL 289 >gi|313496499|gb|ADR57865.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 284 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 79/287 (27%), Gaps = 81/287 (28%) Query: 28 SWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE----------MGSY 77 SW L G ++ + R D+ D+V LQE + Sbjct: 56 SW--QHLLPHNGRAVNLQKIGRLLGDF------------DLVALQEADGGSLRSGYVNQV 101 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 +A + W + R + + SN VL + P L Sbjct: 102 EHLAHLGAFPYW--YQQLNRNLGRFAQHSN--------------GVLSRLKPQLLEDHPL 145 Query: 138 SRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 R A+ + + V+ +HL + Q +I + Sbjct: 146 PGPAGRGAILVRFGEGEDALIVVMMHLALGA-------------KTRALQL----GYIRE 188 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 V+ GD N L + + + + + R + + Sbjct: 189 LIGGYRHQVLMGDMNTHATDLLEHSPL-RDLGLVAPQVEAT---------FPSWRPQRCL 238 Query: 258 DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 D+ ++ + + ++ + +SDH P++++ Sbjct: 239 DHILLSSS--------------LTLERVEVLAQPISDHLPVAVEIRL 271 >gi|312884597|ref|ZP_07744301.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367909|gb|EFP95457.1| hypothetical protein VIBC2010_15519 [Vibrio caribbenthicus ATCC BAA-2122] Length = 457 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 50/306 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 L + T + +R+ ++N+ + + + + + L Y Sbjct: 169 FVLAEHTIADTEAREHALRIATYNL-WMIPSVSLDISERATILDH----TLSGY------ 217 Query: 67 DIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL 124 D++ LQE +A+ FY T+ + S + + T R + Sbjct: 218 DVLTLQEAFSSDRDALFDALSGEY---FYRTDVVGGDSMALYDGGVVT--LSRYPILETD 272 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 + D ++ G V ++ G+ + + HL SF + L Sbjct: 273 SIVFEHCSGTDCYADKGI---VYTKIDKLGQIYHIFNTHLASF---STPAAKRLRRLQLG 326 Query: 185 SQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL----IRFPKE 240 + L I Q + AGDFN + N+DF + + +L + Sbjct: 327 LLRTFMLTKEIPQ----DEAVIFAGDFN-----IDKNNDFLEYLLMLATLEVDPPLYTGY 377 Query: 241 KDSRCNANKNLRNKI---------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR--G 289 +D+ + N + +DY ++ + ++ +++ N+ + Sbjct: 378 RDATFDPRINPYAQSQYSGGDTIEYLDYILVSSEHKRAR--QNINQVKLNQRVTAATWGE 435 Query: 290 KRLSDH 295 LSDH Sbjct: 436 WHLSDH 441 >gi|296123488|ref|YP_003631266.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296015828|gb|ADG69067.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 253 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 21/144 (14%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +R+VS+NI+ ++ R LR L+ D++ LQE+ + A ++ Sbjct: 1 MRIVSFNIH------KGIGGRDRRYRLERIIEALRA----LEPDVICLQEVDHHVARSR- 49 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA--- 140 + S + H+ N + ++ YPL Sbjct: 50 --YDHQAKLISEALGLVHAHYQLNVRLKEG-----GYGNLIASRYPLASVHAISLTRRHY 102 Query: 141 GNRRAVELLVEINGKKIWVLDIHL 164 R A ++V+ ++ ++ HL Sbjct: 103 KPRGAQLVVVQTPLGRLHLIHWHL 126 >gi|261879847|ref|ZP_06006274.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] gi|270333506|gb|EFA44292.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] Length = 321 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 77/268 (28%), Gaps = 55/268 (20%) Query: 66 ADIVFLQEMGSYNAV-----AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 D+V L E+ + + V + + + R + Sbjct: 72 PDLVALTEVENDSVVHDLTKRSLLKNAGYEYVVTDSPDQ-----------------RGID 114 Query: 121 VRVLQQSYPLLGAKDSFSRAGN----RRAVELL----VEINGKKIWVLDIHLKSFCFLDS 172 V +L R R ++L +G + V +H S + Sbjct: 115 VALLYLPSSFRLLSSRSIRIPPFRHFRPTRDILCASGATASGDTLHVFVVHAPSRSAGEK 174 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQ-KKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDP 230 Y A+ L I + P ++ GDFN +Y GN + Sbjct: 175 ATRPYR------MHVARQLYGAIDSLRALYAQPGIIVMGDFN---DYTGNASIQFLLSGG 225 Query: 231 NDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG- 289 + + + + +D+ + D++ +++ S ++ + ++ + G Sbjct: 226 LRDVSAEARGGHGAKGTYRYHSDWGSLDHILCDEHTAACVVKCSINDAPFLLENEQKYGG 285 Query: 290 -------------KRLSDHCPISIDYDF 304 SDH P+ +D Sbjct: 286 VKPRRTYLGPRYLGGFSDHLPLVAVFDL 313 >gi|114764340|ref|ZP_01443568.1| Endonuclease/exonuclease/phosphatase family protein [Pelagibaca bermudensis HTCC2601] gi|114543288|gb|EAU46305.1| Endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. HTCC2601] Length = 295 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 10/67 (14%) Query: 24 VRLVSWNINTLS--EQEGVSLWKNSVKRTTS--------DYTLLRQYAKNLDADIVFLQE 73 +R+ S N+ L + R + D L + AD++ LQE Sbjct: 1 MRIASLNMQNLRLLPDGSGGHLHGARDRDDAESPAHDAADRRLTAELLAATGADVLALQE 60 Query: 74 MGSYNAV 80 + ++ Sbjct: 61 VFDAESL 67 >gi|225705642|gb|ACO08667.1| Deoxyribonuclease gamma precursor [Oncorhynchus mykiss] Length = 306 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 8/102 (7%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFVM-D 263 +I GDFN +Y+ I + + D+ N + + D VM Sbjct: 166 MILGDFNADGSYVTKKGMTNIRIRSDKKFHWVIGDDVDTTANTSNDHTY----DRIVMYG 221 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + + ++ S Y++ S L SDH P+ ++ Sbjct: 222 DDMLEAMVPNSAKPFNYHKAFHLSEAMALSISDHYPVEVELT 263 >gi|269967644|ref|ZP_06181694.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] gi|269827731|gb|EEZ82015.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] Length = 268 Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 23/159 (14%) Query: 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 L+ D++ LQE+ KV + + + H +A Sbjct: 17 QLQALIDKHQPDVIGLQEI-------KVHDEA---FPIEAVEAMGYKVYFHGQKAHYGVA 66 Query: 116 VR-KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 + K+ +Q+ +P + R + + NG+K+ VL+ + D++ Sbjct: 67 MLCKQEPLHVQKGFPTDNEEHQK-----RMIMATFLNENGEKVTVLNGYFPQG---DNIS 118 Query: 175 NTYSPSCSLLSQQA-QWLKDWITQKKESLVPFVIAGDFN 212 + +Q + L ++ + ++ GD N Sbjct: 119 HETKFP---YKRQFYKDLMTYLNDHHNNDEQLIVMGDIN 154 >gi|255536608|ref|YP_003096979.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] gi|255342804|gb|ACU08917.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] Length = 325 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 56/169 (33%), Gaps = 37/169 (21%) Query: 150 VEINGKKIWVLDIHLKSFCFLDS---LENTYSPSCSLLSQQAQWLKDWITQKKES----- 201 + INGK I ++I+L F F S Y + L L ++ Sbjct: 175 IRINGKTIRFVNIYLNPFSFDKSKVKPSEDYDKNKRKLRYILSTLIPTFKAHQDEVSVIK 234 Query: 202 ------LVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 P ++AGDFN N + + N + N+ KI Sbjct: 235 KTIAESPYPVIVAGDFN-----AVPNSYEYYQLSENLKDVFVETG---NGNSTSFHDYKI 286 Query: 256 P--IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 P IDY E + + Y D R ++SDH PI ++ Sbjct: 287 PIRIDYVFCS---------EEITPVRYTVD----RRAKMSDHYPIIAEF 322 >gi|150009697|ref|YP_001304440.1| hypothetical protein BDI_3112 [Parabacteroides distasonis ATCC 8503] gi|255013008|ref|ZP_05285134.1| hypothetical protein B2_03828 [Bacteroides sp. 2_1_7] gi|298374104|ref|ZP_06984062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|149938121|gb|ABR44818.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Parabacteroides distasonis ATCC 8503] gi|298268472|gb|EFI10127.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 280 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 101/310 (32%), Gaps = 50/310 (16%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 ++L F + + K+ + S+N L + V R +L+ + D Sbjct: 9 ISLFTFCIGISGQQKCKLNVGSFN---LRYDNEGDKDDSWVHRKDMAVSLVHFH----DF 61 Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D+ +QE G + V ++ +T+ + + A+ +K ++L Sbjct: 62 DVFGIQE-GLIHQVKELVKDDTYTYVGVGRDDGKEAGEHA------AVLFKKDRFKLLDS 114 Query: 127 SYPLLGAKDSFSRAG-----NRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSP 179 L G R ++ +GK+ + +H F + Sbjct: 115 GNYWLSETQDKPSFGWDAQCRRVCSWAKLKDKVSGKEFYFFSVH-----FDHIGKVARHE 169 Query: 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSL 234 S ++ + K P + GDFN I L ++ + + + + Sbjct: 170 SALIMLANIK--------KIAGDSPAICVGDFNGTPDSEPIQILKSDGLLLDSREISKTP 221 Query: 235 IRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 ++ N N ++N+ IDY + + Y + G SD Sbjct: 222 PYGTVGTTNQFNLNAPMKNR--IDYIFV---------TKGIQVNKYGTLNECQYGHFSSD 270 Query: 295 HCPISIDYDF 304 H PI I+ +F Sbjct: 271 HFPIMIEAEF 280 >gi|68063675|ref|XP_673834.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase) [Plasmodium berghei strain ANKA] gi|68070845|ref|XP_677336.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491972|emb|CAI02361.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase), putative [Plasmodium berghei] gi|56497413|emb|CAH98029.1| hypothetical protein PB000718.02.0 [Plasmodium berghei] Length = 346 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 14/90 (15%) Query: 216 NYLGNNDDFWK---TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQ 272 NY ND +K I+ N R P CN ID+F++ +N + Sbjct: 266 NYKIKNDPTYKRKTNINDNIYTWRCPFLIGKSCNRAMR------IDHFIVSKNLLNQI-- 317 Query: 273 ESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 E+ Y+ G SDHCP+ ++ Sbjct: 318 ENIEIHGYSVFHTNFYG---SDHCPVILNM 344 >gi|1944175|dbj|BAA19649.1| exonuclease III [Aggregatibacter actinomycetemcomitans] Length = 267 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 38/190 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++++S+NIN L + L + D++ LQE+ +V Sbjct: 1 MKIMSFNINGLRARPH----------------QLEEIINKYQPDVLGLQEI---KVSDEV 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRAGN 142 FP + + + L H H +A + K+ +++ +P + Sbjct: 42 FP---YDLV---DHLGYHVNHF-GQKGHYGVALLSKQVPLSVRKGFP------TDDEEAQ 88 Query: 143 RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESL 202 +R + + +E ++ V++ F + + L+ ++ Q + Sbjct: 89 KRIIMIDLETKFGQLTVIN-----GYFPQGESREHPTKFPAKQKFYADLQRYLEQDHNAQ 143 Query: 203 VPFVIAGDFN 212 P +I GD N Sbjct: 144 NPVIIMGDMN 153 >gi|295132909|ref|YP_003583585.1| hypothetical protein ZPR_1044 [Zunongwangia profunda SM-A87] gi|294980924|gb|ADF51389.1| probable secreted protein [Zunongwangia profunda SM-A87] Length = 282 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 100/314 (31%), Gaps = 77/314 (24%) Query: 2 IRKYVLALVFFLVPCTASVAQKVR----LVSWNINTLSEQEGVSLWKNSVKRTTSDYTLL 57 I+ L L+FF V A + VR ++S+NI+ + + + Sbjct: 21 IKSAFLILLFFNVIYKAHSQKLVRSEVIVLSYNIHHANPPSQSEVIN---------LDTI 71 Query: 58 RQYAKNLDADIVFLQEMG-------SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDI 110 KN ADIV LQE+ +AKV + ++ + IN + I Sbjct: 72 ATIIKNSKADIVGLQEVDIYTERSGKKLNMAKVLAEKAGFEYWYFSKSINFQGGEYGTAI 131 Query: 111 HTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGK-KIWVLDIHLKSFCF 169 + + L A R + IN K +I + + HL Sbjct: 132 LSKFPLSDTITTKLPNP----------KNAEPRTLSLANIHINPKLEIKIANTHL----- 176 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 D + + + + Q ++ ++ P +I GDFN + Sbjct: 177 -DYTDASNNLA------QVSAIRKILS---SEDKPVIITGDFN--------------VVP 212 Query: 230 PNDSLIRFPKEKDSRCN-----ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + S+ + S C + +++ IDY + N L + E Sbjct: 213 ESSSMNHLLEIFSSSCTDVCDFTSSAQQSESTIDYILYKSNTIDVLEHKVLKETFA---- 268 Query: 285 IKSRGKRLSDHCPI 298 SDH P+ Sbjct: 269 --------SDHFPV 274 >gi|269123233|ref|YP_003305810.1| hypothetical protein Smon_0452 [Streptobacillus moniliformis DSM 12112] gi|268314559|gb|ACZ00933.1| hypothetical protein Smon_0452 [Streptobacillus moniliformis DSM 12112] Length = 338 Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 17/98 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +I GDFN + + N D L + + ++N + ID+ ++ ++ Sbjct: 257 IILGDFNATLRHGALN----SITTHEDVLDYLSRFRRGTWHSNFPIWMSTSIDHILIPKD 312 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 Y + R SDH I ++ Sbjct: 313 -------------TYRVKKVDVLKLRESDHRAIFVEIS 337 >gi|39945134|ref|XP_362104.1| hypothetical protein MGG_04549 [Magnaporthe oryzae 70-15] gi|145011371|gb|EDJ96027.1| hypothetical protein MGG_04549 [Magnaporthe oryzae 70-15] Length = 1408 Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 83/275 (30%), Gaps = 57/275 (20%) Query: 65 DADIVF--LQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 +IV QE+ S + P+ + ++ +N + + + Sbjct: 699 QPEIVAVGFQEIVELSPQQIMNSDPRRKQLWENAVKQTLNENCERHGQEKYVLLRSGQLV 758 Query: 113 ----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 I V+ +R ++ + AGN+ AV + ++ I + HL + Sbjct: 759 GAALCIFVKASALRNIKNVEGNVKKTGMSGMAGNKGAVAIRLDYASTPICFVTAHLAAG- 817 Query: 169 FLDSLENTYSPSC--SLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDFW 225 F + E + L Q + VI GDFN +I + D Sbjct: 818 FANYEERNKDYATIHQGLRFQ--------RNRGIDDHDTVIWLGDFNYRIGL--SRDKTM 867 Query: 226 KTIDPNDSLIRFPKEK---------------DSRCNANKNLRNKIPIDYFVMDQNA---- 266 I D + ++ ++R N + + D + + A Sbjct: 868 DLIKRQDLGRLYENDQLNLQMVAGLSFQYYSEARINFMPTYKFDLGNDVYDSSEKARIPA 927 Query: 267 ---YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + + Y+ + R SDH P+ Sbjct: 928 WTDRILRKGNNIRQTSYDSAPL-----RFSDHRPV 957 >gi|329664474|ref|NP_001192653.1| deoxyribonuclease gamma [Bos taurus] gi|297488566|ref|XP_002697036.1| PREDICTED: deoxyribonuclease I-like 3 [Bos taurus] gi|296474868|gb|DAA16983.1| deoxyribonuclease I-like 3 [Bos taurus] Length = 305 Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 28/119 (23%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCN 246 ++ + F+ GDFN +Y+ W D D+ +K + C Sbjct: 177 RRWNAENFIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDT----TVKKSTNCA 232 Query: 247 ANKNLRNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ QN ++ +S + + S K L SDH P+ Sbjct: 233 ----------YDRIVLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281 >gi|294944081|ref|XP_002784077.1| protein angel, putative [Perkinsus marinus ATCC 50983] gi|239897111|gb|EER15873.1| protein angel, putative [Perkinsus marinus ATCC 50983] Length = 293 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 18 ASVAQKVRLVSWNINTLSEQE---GVSLWKNSVKRTTSDYTL---LRQYAKNLDADIVFL 71 + ++WN+ + + + N +R + L + L+AD+V L Sbjct: 7 PPSSSVFSFLTWNVLHTAHYQRLLADPTFNNPKRRALAPSARQVNLTNHLLRLNADVVAL 66 Query: 72 QEMG 75 QE+ Sbjct: 67 QELD 70 >gi|222641774|gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group] Length = 1139 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Query: 196 TQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 ++ S +P+++ GDFN + + + N+S +R ++ C + + Sbjct: 548 DIRQSSDLPWLVMGDFNEVLWQYEH----FSKRPRNESQMRAFRDALHSCELHDLGFRGL 603 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 P Y D + ++ ++ ++ + SDHCPI + Sbjct: 604 PHTY---DNKREGW---NNWRDV-FSNAQLSHLVSPCSDHCPIVLQLS 644 >gi|281491447|ref|YP_003353427.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] gi|281375165|gb|ADA64678.1| Endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] Length = 352 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 35/171 (20%) Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 L ++ + KK + + HL +F ++ QQ L D + + + Sbjct: 203 SILPIKNSDKKFVIFNTHLSAFITDQKIQ----------KQQLLTLFDEMKKYVSKG-DY 251 Query: 206 VIAG-DFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIP----- 256 VI G D+N + + + W P ++L R ++ + + Sbjct: 252 VICGADYNHALAGKAHPELTWMKEFPTENLTKGMRVVAPTNAPTVRSLDYAYDKKNPKNT 311 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID F++ N I + SDH P+ +D+ Sbjct: 312 FGIIDGFLVSNNIKDLKI------------QTIDNQFKSSDHQPVVMDFSL 350 >gi|317504528|ref|ZP_07962503.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] gi|315664350|gb|EFV04042.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] Length = 283 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 95/319 (29%), Gaps = 53/319 (16%) Query: 2 IRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYA 61 ++++ + L+ C +AQ + ++NI + + ++ +R L + Sbjct: 1 MKRFTFLAITLLLGCNL-MAQSFYVGTYNIRY-NNPDDIAEGNAWKQRCP----HLCDFI 54 Query: 62 KNLDADIVFLQEM--GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 I QE+ + + K + + + + AI + Sbjct: 55 NFEQPVIFGTQEVLVDQLHDLQK--GLDHYSTLGVGREDGKEAGE------YAAIFFKSD 106 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEING-------KKIWVLDIHLKSFCFLDS 172 ++ L Y L + G A + K + + H+ Sbjct: 107 ALKCLDSGYFWLSETPNKPSLGWDAACIRICTWGKFEDKASKKTFFFFNTHM-----DHV 161 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND 232 S L+ Q + + ++ GDFN + D+ +K + Sbjct: 162 GTKARRESAHLILNQIKAI--------AKNNHVILTGDFN-----VDQTDEIYKIFSDSG 208 Query: 233 SLIRFPKEKDSRCNAN-------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 L R ++ R+ ID+ + + F I+ I N + Sbjct: 209 LLRDCYANAKQRMAPIGTWNDYMQDYRDMARIDHIFVSND---FNIEHYG--IFTNSYWL 263 Query: 286 KSRGKRLSDHCPISIDYDF 304 + +SDH P+ + Sbjct: 264 GKTRRNISDHYPVMVKLQM 282 >gi|15672926|ref|NP_267100.1| hypothetical protein L169897 [Lactococcus lactis subsp. lactis Il1403] gi|12723881|gb|AAK05042.1|AE006329_1 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 352 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 35/171 (20%) Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 L ++ + KK + + HL +F ++ QQ L D + + + Sbjct: 203 SILPIKNSDKKFVIFNTHLSAFITDQKIQ----------KQQLLTLFDEMKKYVSKG-DY 251 Query: 206 VIAG-DFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIP----- 256 VI G D+N + + + W P ++L R ++ + + Sbjct: 252 VICGADYNHALAGKAHPELTWMKEFPTENLTKGMRVVAPTNAPTVRSLDYAYDKKNPKNT 311 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID F++ N I + SDH P+ +D+ Sbjct: 312 FGIIDGFLVSNNIKDLKI------------QTIDNQFKSSDHQPVVMDFSL 350 >gi|317032475|ref|XP_001394977.2| DNA lyase [Aspergillus niger CBS 513.88] Length = 555 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE 73 +R+ +WN+N + W R + + L+ADIV QE Sbjct: 3 LRITTWNVNGIRNPFSYEPW-----RGKRTFDAM---FDILEADIVVFQE 44 >gi|301088330|ref|XP_002996873.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262111466|gb|EEY69518.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 320 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 12/160 (7%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVL 124 D+V LQEM K F + + + + + + I + + R V Sbjct: 49 DVVILQEMFEAGPRQKRFVREAYAMGFRYHCGSVWPRLLDSRLIDGGLLILSRYPIVERD 108 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q +Y D G A L + V H ++ D+ ++ Sbjct: 109 QLAYSQGAGSDGICAKGVLYARIQLSPDLSDSLHVFTTHTQAG---DNYKDYSIR----- 160 Query: 185 SQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222 Q Q + ++ + + + VP +I GDFN + +D Sbjct: 161 LAQIQEMHRFVARTIRDDPGVPVLITGDFNLDARHDLVHD 200 >gi|154757658|gb|AAI51788.1| DNASE1L3 protein [Bos taurus] Length = 295 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 6/108 (5%) Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPI 257 ++ + F+ GDFN +Y+ + + + +++ N Sbjct: 177 RRWNAENFIFMGDFNAGCSYVPKKAWKDIRLRTDPKFVWLIGDQEDTTVKNST---NCAY 233 Query: 258 DYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ QN ++ +S + + S K L SDH P+ Sbjct: 234 DRIVLRGQNIVNSVVPQSNLVFDFQKAYRLSESKALDVSDHFPVEFKL 281 >gi|326406489|gb|ADZ63560.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis CV56] Length = 352 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 35/171 (20%) Query: 146 VELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPF 205 L ++ + KK + + HL +F ++ QQ L D + + + Sbjct: 203 SILPIKNSDKKFVIFNTHLSAFITDQKIQ----------KQQLLTLFDEMKKYVSKG-DY 251 Query: 206 VIAG-DFNRKINYLGNNDDFWKTIDPNDSLI---RFPKEKDSRCNANKNLRNKIP----- 256 VI G D+N + + + W P ++L R ++ + + Sbjct: 252 VICGADYNHALAGKAHPELTWMKEFPTENLTKGMRVVAPTNAPTVRSLDYAYDKKNPKNT 311 Query: 257 ---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID F++ N I + SDH P+ +D+ Sbjct: 312 FGIIDGFLVSNNIKDLKI------------QTIDNQFKSSDHQPVVMDFSL 350 >gi|294501930|ref|YP_003565630.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium QM B1551] gi|295707279|ref|YP_003600354.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium DSM 319] gi|294351867|gb|ADE72196.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium QM B1551] gi|294804938|gb|ADF42004.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium DSM 319] Length = 261 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 49/172 (28%), Gaps = 36/172 (20%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERL---INHSKRDSNNDIHT- 112 L + K D++ LQE+ KV + S + + Sbjct: 23 LAEVIKKEKYDVIALQEVS-----QKVDAPYVYDYIRSDNYAWLLAKELGKQGEDYQLVW 77 Query: 113 ------------AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL 160 IA+ K+ + + S+ + + RR V +E + + Sbjct: 78 DLSHIGYEVYEEGIAILTKHPIIEEHSF-FVSQTSNIDYWKTRRIVGATIEYEKELLTFY 136 Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 HL + D E QQ L PF + GDFN Sbjct: 137 SCHL--GWWDDEEE--------PFKQQVDTL----LAHVHKDNPFFLLGDFN 174 >gi|259089125|ref|NP_001158599.1| Deoxyribonuclease gamma [Oncorhynchus mykiss] gi|225705192|gb|ACO08442.1| Deoxyribonuclease gamma precursor [Oncorhynchus mykiss] Length = 306 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 8/102 (7%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFVM-D 263 +I GDFN +Y+ I + + D+ N + + D VM Sbjct: 166 MILGDFNADGSYVTKKGMTNIRIRSDKKFHWVIGDDVDTTANTSNDHTY----DRIVMYG 221 Query: 264 QNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + + ++ S Y++ S L SDH P+ ++ Sbjct: 222 DDMLEAMVPNSAKPFNYHKAFHLSEAMALSISDHYPVEVELT 263 >gi|282880228|ref|ZP_06288945.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281305888|gb|EFA97931.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 316 Score = 37.4 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 85/268 (31%), Gaps = 55/268 (20%) Query: 66 ADIVFLQEMGSYN---AVAK--VFPKNTWCIFYSTERLINHSKRDSNNDI---HTAIAVR 117 D+V L E+ + + A+ + + + + HS + D+ ++ + + Sbjct: 73 PDMVGLCEVENDSCLVALTRRSLLRHARYEYVMT------HSPDERGIDVALLYSPFSFQ 126 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSL 173 + ++ P+ KD R ++L G + V +H S + Sbjct: 127 ----LLDWRAIPIHPVKD------MRPTRDVLYARGRIVTGDTLHVFVVHAPSRMGGEPF 176 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 ++ + QA ++ + ++ GDFN ++D + + Sbjct: 177 TRSHRRIVGDILLQAIDSIQSVSTRPR----ILVMGDFN-----DYSSDKNILRLVQSG- 226 Query: 234 LIRFPKEKDSRCNANKNLRNK---IPIDYFVMDQNAYKFLIQESFSEILY---------- 280 L+ A R + +D+ +D+++ + + + + Sbjct: 227 LVEVSANAKGTHGAKATYRFRGEWGSLDHIFLDKSSAALVQECYVHDAPFLLEKDEKYGG 286 Query: 281 ----NEDDIKSRGKRLSDHCPISIDYDF 304 SDH P+ + ++ Sbjct: 287 VKPRRNYQGPRYLNGFSDHLPLVMRINW 314 >gi|321260787|ref|XP_003195113.1| 26S protease regulatory subunit 7 [Cryptococcus gattii WM276] gi|317461586|gb|ADV23326.1| 26S protease regulatory subunit 7, putative [Cryptococcus gattii WM276] Length = 450 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 8/99 (8%) Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+F E+ + + + + + + R ++ + Sbjct: 288 IIFFDEVD-------AIGGARFDDGAGGDNEVQRTMLEL-INQLDGFDPRGNIKVIMATN 339 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 P R VE + N + +L IH KS Sbjct: 340 RPDTLDPALLRPGRLDRKVEFSLPDNEGRTHILKIHGKS 378 >gi|89889838|ref|ZP_01201349.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89518111|gb|EAS20767.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 329 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 92/337 (27%), Gaps = 67/337 (19%) Query: 14 VPCTASVAQKVRLVSWNINTL--SEQEGVSLWKN---------SVKRTTSDYTLLRQYAK 62 + + ++ + +N+ L + L ++ + +R L Sbjct: 1 MAISQQAFEQYTVAFYNLENLFDVHNDEHILDEDFTAQGRKQWTPQRYQKKLQKLSDAIS 60 Query: 63 NLD-------ADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 + I+ + E+ + + + + + I H I A+ Sbjct: 61 KVGVLQTGKLPAIIGVAEVENKKVLEDLIEQPK---LVKGDYGIIHYNSPDERGIDVALL 117 Query: 116 VRKKNVRVLQQSYPLLG-AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 RKK V S + + R + + ++G + + H S Sbjct: 118 YRKKLFTVESSSPIAVDVTMPNDEPDRTRDILYVKGFLSGMPLHLYVNHWPSRRDGAQST 177 Query: 175 NTYSPSCSLLSQQ-------AQWLKDWITQKKE--SLVPFVIAGDFNRKINYLGNNDDFW 225 N +++Q D Q+K ++ GDFN ND Sbjct: 178 NEKRV---TVAKQLMSHVNNVDPHNDRTNQEKHLLEGTNIIVMGDFN----DDPENDSIR 230 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDD 284 I P + N K D ++ + LI + + +++ D Sbjct: 231 NEILPYG-FQNVTAPLKKFHRGSLNHNFKWNLFDQIMVSDS----LINDVPDALYFHQAD 285 Query: 285 I-----------------------KSRGKRLSDHCPI 298 I ++ SDH P+ Sbjct: 286 IFDDIMLRQWKGKYRGQPARTFVGRTYKGGYSDHFPV 322 >gi|58269788|ref|XP_572050.1| endopeptidase [Cryptococcus neoformans var. neoformans JEC21] gi|57228286|gb|AAW44743.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 450 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 8/99 (8%) Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+F E+ + + + + + + R ++ + Sbjct: 288 IIFFDEVD-------AIGGARFDDGAGGDNEVQRTMLEL-INQLDGFDPRGNIKVIMATN 339 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 P R VE + N + +L IH KS Sbjct: 340 RPDTLDPALLRPGRLDRKVEFSLPDNEGRTHILKIHGKS 378 >gi|305667408|ref|YP_003863695.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] gi|88709456|gb|EAR01689.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] Length = 252 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 16/110 (14%) Query: 199 KESLVPFVIAGDFNRK---INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKI 255 S +P ++ GDFN +D P + N L N+ Sbjct: 155 NSSNLPVILMGDFNLNPVEKPIKSIKKVMVDGLDATQKPFYGPSGTFNGFNPTMKLDNR- 213 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNE-DDIKSRGKRLSDHCPISIDYDF 304 IDY + ++ Y DD K +SDH P+ I ++ Sbjct: 214 -IDYIFV----------KNIKVKSYTHIDDRMENNKHISDHLPVLIHIEY 252 >gi|134113783|ref|XP_774476.1| hypothetical protein CNBG1220 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257114|gb|EAL19829.1| hypothetical protein CNBG1220 [Cryptococcus neoformans var. neoformans B-3501A] Length = 450 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 8/99 (8%) Query: 68 IVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS 127 I+F E+ + + + + + + R ++ + Sbjct: 288 IIFFDEVD-------AIGGARFDDGAGGDNEVQRTMLEL-INQLDGFDPRGNIKVIMATN 339 Query: 128 YPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS 166 P R VE + N + +L IH KS Sbjct: 340 RPDTLDPALLRPGRLDRKVEFSLPDNEGRTHILKIHGKS 378 >gi|289675836|ref|ZP_06496726.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae FF5] Length = 232 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS 76 LQ + Sbjct: 129 LQGVDD 134 >gi|302537782|ref|ZP_07290124.1| exodeoxyribonuclease III [Streptomyces sp. C] gi|302446677|gb|EFL18493.1| exodeoxyribonuclease III [Streptomyces sp. C] Length = 259 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 35/131 (26%), Gaps = 16/131 (12%) Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-FWKTIDPNDSLIRFPKEKDSRC--- 245 L I + PF + GDFN D + + R E Sbjct: 129 ALATAIAEDAAGTRPFAVLGDFNVAPTDEDVYDPAVFAGLTHVTPAERAALEALRTAGLA 188 Query: 246 ----NANKNLRNKIPIDY-FVMDQNAYKFLIQESFSEILYNEDDIKSRGKR-------LS 293 A K R DY + I + + + + R S Sbjct: 189 DVMPRALKYDRPYTFWDYRQLAFPKNRGMRIDLVYGNEPFAKAVKDAYVDREERKGKGAS 248 Query: 294 DHCPISIDYDF 304 DH P+ +D D Sbjct: 249 DHAPVVVDLDL 259 >gi|254255473|ref|ZP_04948789.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124901210|gb|EAY71960.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 401 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 47/198 (23%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV 80 + +R+ ++NI G W + + LDAD++ LQE+ Sbjct: 164 GRDLRIATYNIG-----GGYGTWSVPAA------DRIAAVIEELDADVIALQEVP----- 207 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-----RKKNVRVLQQSYPLLGAKD 135 ++ H + + + R N + + D Sbjct: 208 ---LGGT------HAPDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLD 258 Query: 136 S-FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194 F + R A++ ++ I V+ HL L + + Q Q L Sbjct: 259 LSFHQREPRGALDADIDCIAGPIRVVATHL-------GLSASERSA------QVQRLLAA 305 Query: 195 ITQKKESLVPFVIAGDFN 212 +P ++ GD N Sbjct: 306 FDT---GAMPVILLGDIN 320 >gi|319406308|emb|CBI79945.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 272 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 108/306 (35%), Gaps = 68/306 (22%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAV--AK 82 R+ +WNIN++ + + + QY D++ LQE+ + + + Sbjct: 4 RIATWNINSIRLR----------------LSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQ 47 Query: 83 VFPKNTWC-IFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 F + I S ++ + +A+ + V + + + Sbjct: 48 FFEAAGYQHIALSGQKS------------YHGVAIISRLPFVSIER------RFFCQKED 89 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + +++E++G++I + + ++ + D + + + +L++ + + + Sbjct: 90 CRH-LSVIIELHGRRIRIHNFYVPAG--GDEPDVNKNE---KFRYKLDFLEEMSSIRSDQ 143 Query: 202 LV--PFVIAGDFNRKINYLGNNDDFWKTIDPNDS-LIRFPKEKDSRCNANKN---LRNKI 255 ++ GD N I L + K + S + + C +R K Sbjct: 144 GDGLASLLLGDLN--IAPLPEDVWSHKQLLKVVSHTPIETERLQALCCEGGWVDLMRMKF 201 Query: 256 PI-------------DYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK----RLSDHCPI 298 PI D+ + D+ I S + + + ++ R + SDH P+ Sbjct: 202 PIPTKLYTWWSYRARDWALADRGRRLDHIWSSPNLVPFVKELAIFREARGWPQASDHVPV 261 Query: 299 SIDYDF 304 +DF Sbjct: 262 QTLFDF 267 >gi|240949558|ref|ZP_04753897.1| exonuclease III [Actinobacillus minor NM305] gi|257465617|ref|ZP_05629988.1| exonuclease III [Actinobacillus minor 202] gi|240295999|gb|EER46665.1| exonuclease III [Actinobacillus minor NM305] gi|257451277|gb|EEV25320.1| exonuclease III [Actinobacillus minor 202] Length = 267 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 42/192 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 ++ +S+NIN L + L + D++ LQE + + Sbjct: 1 MKFISFNINGLRARPH----------------QLEAIIEKHQPDVIGLQEIKVADEDFPY 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSRA 140 + + +F H +A + KK +++ +P A+D+ R Sbjct: 45 DLVNHLGYHVF------------HHGQKGHYGVALLTKKAPLAVRKGFPT-DAEDAQKRM 91 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 + +E + VL+ F ++ ++ L+ ++ + + Sbjct: 92 -----IMADIETEFGTLTVLN-----GYFPQGENRSHETKFPAKAKFYADLQHYLENQLK 141 Query: 201 SLVPFVIAGDFN 212 P +I GD N Sbjct: 142 PENPIIIMGDMN 153 >gi|328851541|gb|EGG00694.1| hypothetical protein MELLADRAFT_79168 [Melampsora larici-populina 98AG31] Length = 776 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 10/78 (12%) Query: 21 AQKVRLVSWN--INTLSEQEGVSLWKNSVKRTT-------SDYTLLRQYAKNLDADIVFL 71 +R WN + + RT SD+ + + LDAD++ + Sbjct: 626 GMPLRKADWNEYLQW-AVDSFKLATAGVEDRTQTHSHFCYSDFNEIMSHIARLDADVISI 684 Query: 72 QEMGSYNAVAKVFPKNTW 89 + S + + KVF + Sbjct: 685 EASKSDHKLLKVFASVEY 702 >gi|3236320|gb|AAC23652.1| DNase gamma [Homo sapiens] Length = 305 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 232 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 233 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|15892269|ref|NP_359983.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15619409|gb|AAL02884.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 286 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 45/192 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ A DI+ LQE S + Sbjct: 16 MKIVTWNINSLRLR----------------IDLLRKLAYEHQPDIILLQETKVADSLFPL 59 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ K S L + Sbjct: 60 EVIKNIGYEHVIYSGQKS------------YNGVAIISKFPLNNVFSLELY-------NS 100 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ N +I + ++ + D + + + + +++W+T + Sbjct: 101 DKRHIAAIV---NDIEIH--NFYVPAG--GDIPDIEVNTKFKHKLEYVRLMQEWLTTNRT 153 Query: 201 SLVPFVIAGDFN 212 +I GD N Sbjct: 154 KNDKMIIVGDLN 165 >gi|331011356|gb|EGH91412.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 262 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ DIV Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDIVL 128 Query: 71 LQEMGS 76 LQ + Sbjct: 129 LQGVDD 134 >gi|303263926|ref|ZP_07349847.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS397] gi|302646331|gb|EFL76557.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS397] Length = 202 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 17/99 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +IAGDFN + + K D+L P + N+ ID+ ++ +N Sbjct: 121 IIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNSQSPKLFNATIDHILLPKN 176 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y D+ + SDH I + F Sbjct: 177 H-------------YYVKDLDIVSFQNSDHRCIFTEITF 202 >gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 252 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 77/303 (25%), Gaps = 82/303 (27%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 ++ +SWN+N L D+ + + LDAD +QE Sbjct: 1 MKFISWNVNGLRAV------------VKKDF---AETFQKLDADFFCIQE---------- 35 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK--NVRVLQQSYPLLGAKDSFSRAG 141 + + + A RK + + PL + + Sbjct: 36 ----------TKMQEGQLKLDLPGYRQYFNYAERKGYSGTAIFAKDEPLTVSYGIQAPEF 85 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 + + +E + +L + +S + + ++ Q Sbjct: 86 DHEGRAITLEYP-------NFYLVTSYVPNSGAKLKRLDFRMGWD--KAFHAYLNQLDSH 136 Query: 202 LVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 P ++ GD N + + + + F + + Sbjct: 137 K-PVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQSFTKLLDQGFMDTFRHFYPDKED 195 Query: 247 ANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297 + IDYFV + + ++ SDHCP Sbjct: 196 IYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFG-----------SDHCP 244 Query: 298 ISI 300 + + Sbjct: 245 VEL 247 >gi|111657673|ref|ZP_01408402.1| hypothetical protein SpneT_02001129 [Streptococcus pneumoniae TIGR4] gi|332077016|gb|EGI87478.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae GA17545] Length = 202 Score = 37.4 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 17/99 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +IAGDFN + + K D+L P + N+ ID+ ++ +N Sbjct: 121 IIAGDFNATMRHGA----LAKISSHRDALNALPPFERGTWNSQSPKLFNATIDHILLPKN 176 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y D+ + SDH I + F Sbjct: 177 H-------------YYVKDLDIVSFQNSDHRCIFTEITF 202 >gi|326481851|gb|EGE05861.1| DNA lyase [Trichophyton equinum CBS 127.97] Length = 592 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 15/90 (16%) Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD D + P + + + IDY + N Sbjct: 233 GD-THDTETPPVLRDLCREFHPGRTGMYTCWNQKVNARPG---NYGSRIDYILCSDNIRS 288 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ + E L SDHCP+ Sbjct: 289 WFVESNIQEGLIG-----------SDHCPV 307 >gi|326471548|gb|EGD95557.1| DNA lyase [Trichophyton tonsurans CBS 112818] Length = 592 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 15/90 (16%) Query: 209 GDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYK 268 GD D + P + + + IDY + N Sbjct: 233 GD-THDTETPPVLRDLCREFHPGRTGMYTCWNQKVNARPG---NYGSRIDYILCSDNIRS 288 Query: 269 FLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ + E L SDHCP+ Sbjct: 289 WFVESNIQEGLIG-----------SDHCPV 307 >gi|301102598|ref|XP_002900386.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262102127|gb|EEY60179.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 453 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 12/160 (7%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV--RKKNVRVL 124 D+V LQEM K F + + + + + + I + + R V Sbjct: 49 DVVILQEMFEAGPRQKRFVREAYAMGFRYHCGSVWPRLLDSRLIDGGLLILSRYPIVERD 108 Query: 125 QQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 Q +Y D G A L + V H ++ D+ ++ Sbjct: 109 QLAYSQGAGSDGICAKGVLYARIQLSPDLSDSLHVFTTHTQAG---DNYKDYSIR----- 160 Query: 185 SQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222 Q Q + ++ + + + VP +I GDFN + +D Sbjct: 161 LAQIQEMHRFVARTIRDDPGVPVLITGDFNLDARHDLVHD 200 >gi|327193878|gb|EGE60754.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CNPAF512] Length = 369 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 82/294 (27%), Gaps = 59/294 (20%) Query: 70 FLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHS------KRDSNNDIHTAIA 115 LQE+ + A+ ++ F + ++ + + Sbjct: 75 CLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLMREETRDGQKIELR 134 Query: 116 VRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + + + L + R +EL + I G+ + + +H KS Sbjct: 135 DIRSHAMTTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPLSLYVVHFKSMGNP 194 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-----------RKI 215 + + L +A+ ++ I + + F I GD N R Sbjct: 195 RDGLDGRQSTLPLRRAEARAVRRIIEDRFGAGHTAKKSFAICGDMNDYQERVDVVGRRGA 254 Query: 216 NYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA----------NKNLRNKIPIDYFVMDQN 265 Y + ++ S F + +R ++ +DY + Sbjct: 255 GYRFEHQPEAESALDVFSHDGFVENVMARRQPLDRWTLYHARGPQEQHLCQLDYIWLSPA 314 Query: 266 AYK---------FLIQESFSEILYNEDDIKSR------GKRLSDHCPISIDYDF 304 + + + +++ + SDHCP+ + D Sbjct: 315 LATHNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDL 368 >gi|301060197|ref|ZP_07201064.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300445709|gb|EFK09607.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 250 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 22/121 (18%) Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD-----FWKTIDP---NDSLIRFP-----KEK 241 I + S +I GDFN + + + + + +E Sbjct: 137 IHARDLSYPNTIIIGDFNSNTIWDKKDRWWSHSDIMQELREIKIESAYHYQTNESQGRET 196 Query: 242 DSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISID 301 KNL IDY ++ N I I+ DD ++SDH P+S++ Sbjct: 197 TPTFFHRKNLNKAYHIDYALLSSN-----ILPQSKVIIGKADDWL----KISDHVPLSVE 247 Query: 302 Y 302 Sbjct: 248 I 248 >gi|4826698|ref|NP_004935.1| deoxyribonuclease gamma precursor [Homo sapiens] gi|2494173|sp|Q13609|DNSL3_HUMAN RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNase I homolog protein DHP2; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; AltName: Full=Liver and spleen DNase; Short=LS-DNase; Short=LSD; Flags: Precursor gi|1399719|gb|AAB63967.1| DNase1-Like III protein [Homo sapiens] gi|2905786|gb|AAC35752.1| liver and spleen DNase precursor [Homo sapiens] gi|16198371|gb|AAH15831.1| DNASE1L3 protein [Homo sapiens] gi|119585762|gb|EAW65358.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens] gi|119585763|gb|EAW65359.1| deoxyribonuclease I-like 3, isoform CRA_a [Homo sapiens] gi|123986698|gb|ABM83776.1| deoxyribonuclease I-like 3 [synthetic construct] gi|123999020|gb|ABM87096.1| deoxyribonuclease I-like 3 [synthetic construct] gi|189053848|dbj|BAG36108.1| unnamed protein product [Homo sapiens] Length = 305 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 232 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 233 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|65318105|ref|ZP_00391064.1| hypothetical protein Bant_01001334 [Bacillus anthracis str. A2012] Length = 206 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 20/189 (10%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 + +++++ N+ LS L+ N + +D Y K + D+V L E+ Sbjct: 29 TSTDQNNTLKVMTHNVYMLSTN----LYPNWGQSERADLIGAADYIK--NQDVVILNEVF 82 Query: 76 SYNAVAKVFPK--NTW--CIFYSTERLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQ 126 +A ++ + N S +A+ K V + Sbjct: 83 DNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKV 142 Query: 127 SYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 Y + + V ++ N + + V+ HL++ DS+ SP+ S+ + Sbjct: 143 QYVFANGCGPDNLSNKGF-VYTKIKKNDRFVHVIGTHLQA---EDSMCGKTSPA-SVRTN 197 Query: 187 QAQWLKDWI 195 Q + ++D+I Sbjct: 198 QLKEIQDFI 206 >gi|91205073|ref|YP_537428.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157827591|ref|YP_001496655.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] gi|91068617|gb|ABE04339.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157802895|gb|ABV79618.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] Length = 273 Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 70/192 (36%), Gaps = 45/192 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++V+WNIN+L + LL++ A DI+ LQE + Sbjct: 1 MKIVTWNINSLRLR----------------IDLLKRLAYEHQPDIILLQETKVDDPLFPL 44 Query: 82 KVFPKNTW-CIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 +V + + YS ++ + +A+ + + + + + ++ Sbjct: 45 EVIKNIGYEHVIYSGQKS------------YNGVAI------ISKLPLQNVSSLELYNGD 86 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 A + N +I + ++ + D + + + + +++W+T + Sbjct: 87 KRHIAATV----NNIEIH--NFYVPAG--GDIPDIELNSKFKHKLEYIRLMQEWLTNNRT 138 Query: 201 SLVPFVIAGDFN 212 +IAGD N Sbjct: 139 RDDKIIIAGDLN 150 >gi|297204418|ref|ZP_06921815.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197716686|gb|EDY60720.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 439 Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 22/155 (14%) Query: 161 DIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN 220 ++H + L + L+Q L +I V+ GD N + G+ Sbjct: 150 NLHTNAGTNDGDLASRADN----LNQ----LSAFIKTHSA-GNAVVVMGDTNTRYTRSGD 200 Query: 221 N-----------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKF 269 D + + I + +D + + Sbjct: 201 TIAEFAAANGLTDPWVQLIRGGTPPAKGSDALVCDQTGTTVPNTCEVVDKVLYRSSKLVS 260 Query: 270 LIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L S++ + + S LSDH PI++ + + Sbjct: 261 LNATSYNNE--HAKFLTSDNLMLSDHDPITVGFTW 293 >gi|297671007|ref|XP_002813640.1| PREDICTED: deoxyribonuclease gamma-like isoform 2 [Pongo abelii] Length = 305 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 232 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 233 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|284799781|ref|ZP_05984844.2| endonuclease/exonuclease/phosphatase family protein [Neisseria subflava NJ9703] gi|284797131|gb|EFC52478.1| endonuclease/exonuclease/phosphatase family protein [Neisseria subflava NJ9703] Length = 249 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 82/253 (32%), Gaps = 39/253 (15%) Query: 55 TLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKN-TWCIF-YSTERLINHSKRDSNND 109 + L +D++FLQE+ + FP + I S + ++ K Sbjct: 15 NRMADALGALGSDVLFLQEVQGQHLNRSRRTDFPDAPHYDIIGDSLDYHRSYGKNAVYPK 74 Query: 110 IHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCF 169 H A+ + + + + R E++ E + L +HL Sbjct: 75 RHHGNAILSRLPLKTENNL-NISVNKLEQRGLLH--CEVVPEGWEDPLVCLCVHL----- 126 Query: 170 LDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTID 229 N P L Q + + D++ + P +IAGDFN D K+ Sbjct: 127 -----NLREPD--RLK-QYRAISDYVGRYIRPESPLIIAGDFN---------DWRQKSAR 169 Query: 230 PNDSLIRFPKEKDSRCNAN-KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 S + + K +++PI + + + I + K Sbjct: 170 ELGSALDLNEVFVDNTGKRPKTFPSRLPI-------LSLDRIYTRNLDVIDSEIHNSKDW 222 Query: 289 GKRLSDHCPISID 301 LSDH P+S+ Sbjct: 223 QH-LSDHLPLSVT 234 >gi|330976905|gb|EGH76930.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 194 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 21 AQKVRLVSWNINTLSEQE-----GVSLWKNSVKR-TTSDYT----LLRQYAKNLDADIVF 70 Q +++++WNI L+ + ++ +R T D + + ++ D+V Sbjct: 69 GQALKVMTWNIQYLAGKRYVFWYDMADGSGPDERPTHEDLAYNLDEVARVIRDEQPDVVL 128 Query: 71 LQEMGS 76 LQ + Sbjct: 129 LQGVDD 134 >gi|297160831|gb|ADI10543.1| hypothetical protein SBI_07423 [Streptomyces bingchenggensis BCW-1] Length = 455 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 + + ++H + L + L D+I + ++ GD N + Sbjct: 163 VDLYNVHTNAGTTAADLTARRAN--------ITQLSDFIAA-NSAGNAVIVMGDTNTRYT 213 Query: 217 YLGNN----------DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA 266 +N D W + S + C+ + +D + + Sbjct: 214 RAEDNIRDLTGRNGLTDAWVQLIRGGSAPPAGSDALV-CDPDHVTNTCEVVDKILY--RS 270 Query: 267 YKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 L + + D + + G+ LSDH P ++D+ + Sbjct: 271 SPLLTLTATRYNNEHPDFLDAAGEPLSDHYPHTVDFSW 308 >gi|163757409|ref|ZP_02164498.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] gi|162284911|gb|EDQ35193.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] Length = 270 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 91/305 (29%), Gaps = 63/305 (20%) Query: 25 RLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVF 84 + +WNIN + R L++ + + D++ LQE N F Sbjct: 4 SVTTWNIN------------SVRLR----LPLVQHLLETVQPDVLCLQETKCPNDA---F 44 Query: 85 PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRR 144 P + ++ + +A+ + Q G D+ R Sbjct: 45 PSAAF------RKIGYEHMAIHGQKGYHGVAILSRLPLSDDQRLSYCGIADA------RH 92 Query: 145 AVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW----ITQKKE 200 ++ ++I + + ++ + D +P + ++++ + + Sbjct: 93 VSAVVEAPGERRIRLHNFYVPAG--GDEPNRDINP---KFGHKLDFIEEMRGLHAESELK 147 Query: 201 SLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-----LIRFPKEKDSRCNANKNLRNKI 255 + ++ GD N I L + K + S + + + Sbjct: 148 DGISSILVGDLN--IAPLETDVWSHKQLLKVVSHTPVETENLTGMQQGGAWVDLIRTHIP 205 Query: 256 PIDYFVM--DQNAYKFLIQESFSEI--LYNEDDIKSRGK------------RLSDHCPIS 299 P + A + + + +++ D+ R SDH P++ Sbjct: 206 PEEKVFTWWSYRAKDWAAADRGRRLDHVWSSADLADGLSKIEVLREARGWERPSDHVPVT 265 Query: 300 IDYDF 304 +DF Sbjct: 266 AHFDF 270 >gi|301307705|ref|ZP_07213662.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834379|gb|EFK64992.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 280 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 198 KKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 K P + GDFN I L ++ + + + + ++ N N ++ Sbjct: 180 KIAGDSPAICVGDFNGTPDSEPIQILKSDGLLLDSREISKTPPYGTVGTTNQFNLNAPMK 239 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N+ IDY + +N + Y + G SDH PI I+ +F Sbjct: 240 NR--IDYIFVTKNIH---------VNKYGTLNEFQYGHYPSDHFPIMIEAEF 280 >gi|88799886|ref|ZP_01115458.1| predicted extracellular nuclease [Reinekea sp. MED297] gi|88777317|gb|EAR08520.1| predicted extracellular nuclease [Reinekea sp. MED297] Length = 851 Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 101/345 (29%), Gaps = 72/345 (20%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNL-------DAD 67 A ++R+ S+N+ R +D L + L +AD Sbjct: 439 APEAVAESELRVASFNVLNF-FNGDGQGGDFPTPRGANDVYELERQTAKLVSAITAINAD 497 Query: 68 IVFLQEMGSY------------NAVAKVFP-KNTWCIFYSTERLINHSKRDSNNDIHTAI 114 ++ L E+ + A+ P ++ + + ++DI + Sbjct: 498 VIGLMEIENDGFGELSAIAELTAAINAELPVEDAYQYVI------PNVDLIGDDDIAVGM 551 Query: 115 AVRKKNVR-------VLQQSYPLLGAKD-SFSRAGNRRAVELLVEINGKKIWVLDI--HL 164 R V + QS PL + F NR A+ V++ + + H Sbjct: 552 LYRPSVVSPVGQATILDSQSSPLDDQGEPLFIDDLNRPALAQSVQLTNSDTVMTVVVNHF 611 Query: 165 KS----FCFL----DSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKIN 216 KS C D + Y+ + + QA +I GD +N Sbjct: 612 KSKGNSNCDDYSDCDQGQGAYNVA-RTKAAQALAQWLASGPTGVETDHVMILGD----LN 666 Query: 217 YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFS 276 D T+ N ++ + + + +D+ + ++ Sbjct: 667 AYSQEDPL-TTLMENGYQRLQTEDGYTYVYSGET----GTLDHALATGPLSSNVVGVQQW 721 Query: 277 EILYNEDDIKSR-----------------GKRLSDHCPISIDYDF 304 I +E + R SDH P+ +D+ F Sbjct: 722 HINTDEPRVLDYNTEYKTESQILGFYAPDAYRSSDHDPVIVDFAF 766 >gi|293395887|ref|ZP_06640169.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] gi|291421824|gb|EFE95071.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] Length = 268 Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 90/314 (28%), Gaps = 81/314 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 ++ VS+NIN L + L + D++ LQE + Sbjct: 1 MKFVSFNINGLRARPH----------------QLAAIIEQHQPDVIGLQETKVHDDMFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLGAKDSFSR 139 +V K+ + +FY H +A + K+ +++ +P Sbjct: 45 EEV-SKHGYHVFY------------HGQKGHYGVALLTKEAPIAVRRGFPTDDDDAQ--- 88 Query: 140 AGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKK 199 RR + +E + V++ F + ++ Q L+D++ Q+ Sbjct: 89 ---RRIIMADLETPQGMLTVIN-----GYFPQGESRDHPVKFPAKTRFYQDLQDYLEQQL 140 Query: 200 ESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDP-----------NDSLIRFPKEKDS 243 P +I GD N I N W L + Sbjct: 141 SVENPVLIMGDMNISPSDYDIGIGEENRKRWLRTGKCSFLPEEREWMGRLLNWGLVDTYR 200 Query: 244 RCNANKNLRNKIP--------------IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289 + N +N + ID + + D Sbjct: 201 QANPERNDQFSWFDYRSKGFDDNRGLRIDLLLASTPLAARCVATGI-------DYQTRSM 253 Query: 290 KRLSDHCPISIDYD 303 ++ SDH P+ ++D Sbjct: 254 EKPSDHAPVWAEFD 267 >gi|262382996|ref|ZP_06076133.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295874|gb|EEY83805.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 280 Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 198 KKESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 K P + GDFN I L ++ + + + + ++ N N ++ Sbjct: 180 KIAGDSPAICVGDFNGTPDSEPIQILKSDGLLLDSREISKTPPYGTVGTTNQFNLNAPMK 239 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 N+ IDY + +N + Y + G SDH PI I+ +F Sbjct: 240 NR--IDYIFVTKNIH---------VNKYGTLNEFQYGHYPSDHFPIMIEAEF 280 >gi|68482834|ref|XP_714643.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida albicans SC5314] gi|46436227|gb|EAK95593.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida albicans SC5314] Length = 937 Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 32/102 (31%), Gaps = 6/102 (5%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V++ V+ + + N+ + + + + I + HL + Sbjct: 626 FFVKESQVKYVSNVECSFKKTGLGGVSANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEE 685 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + + + ++ ++ + GDFN +I Sbjct: 686 RHQNYKA----LIKGIQFSK--NRRIQNHDAVIWLGDFNYRI 721 >gi|297190600|ref|ZP_06907998.1| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486] gi|297150553|gb|EDY61820.2| sphingomyelinase C [Streptomyces pristinaespiralis ATCC 25486] Length = 333 Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 16/106 (15%) Query: 113 AIAVRKKNVRVLQQSY--PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---F 167 +AV K V ++ Y D +S G V ++++NG ++ V+ H +S Sbjct: 136 GVAVLSKWPIVRKEQYVYKDACGADWWSNKGF---VYAVLDVNGTRVHVVGTHAQSTDPG 192 Query: 168 CFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE-SLVPFVIAGDFN 212 C D+ E S +Q + + ++ K + V+AGDFN Sbjct: 193 C--DAGEAAEMRS-----RQFRAMDAFLDGKNIPASEQVVVAGDFN 231 >gi|297671005|ref|XP_002813639.1| PREDICTED: deoxyribonuclease gamma-like isoform 1 [Pongo abelii] Length = 275 Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 152 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 202 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 203 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251 >gi|212705002|ref|ZP_03313130.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098] gi|212671554|gb|EEB32037.1| hypothetical protein DESPIG_03070 [Desulfovibrio piger ATCC 29098] Length = 246 Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 6/114 (5%) Query: 1 MIRKYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY 60 MIRK LAL F ++ +A A+ + + L V T +++ Sbjct: 1 MIRKLTLALCFLVLMSSAVAAKTLVVA----GHCGYPPMEYLNDKKVP-TGYSIDYIKEV 55 Query: 61 AKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAI 114 AK D + +++ A + N + ST K +D + + Sbjct: 56 AKRAGFD-MKFRDVAWDGIFAGLASGNYDILASSTTITPERQKTFDFSDPYYGV 108 >gi|114587559|ref|XP_001174037.1| PREDICTED: deoxyribonuclease gamma isoform 2 [Pan troglodytes] gi|114587561|ref|XP_001174043.1| PREDICTED: deoxyribonuclease I-like 3 isoform 3 [Pan troglodytes] gi|114587563|ref|XP_001174051.1| PREDICTED: deoxyribonuclease I-like 3 isoform 4 [Pan troglodytes] Length = 305 Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 182 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 232 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 233 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 281 >gi|332216281|ref|XP_003257277.1| PREDICTED: deoxyribonuclease gamma-like [Nomascus leucogenys] Length = 304 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 181 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 231 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 232 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 280 >gi|315605812|ref|ZP_07880844.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312510|gb|EFU60595.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 271 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 74/230 (32%), Gaps = 48/230 (20%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVA 81 +R +WN+N RT D + + + D DI+ +QE+ Sbjct: 1 MRFATWNVN--------------SIRTRID--RVIAFLERSDTDILAMQEIKCRPDQFPT 44 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY----PLLGAKDSF 137 F + + + + +AV + + + P G + Sbjct: 45 APFEEAGYQVAV------------HGLNQWNGVAVASRLAITDVRDHFPHQPSFGEPATV 92 Query: 138 SRAGNRRAVELL-----VEINGKKIWVLDIHLKSFCFLDSLENTYSPS-CSLLSQQAQWL 191 V++ E + + + +++ + LD+ Y + L++Q + Sbjct: 93 EARALGVTVDVTGVLEAREGSPSSLTIWSLYVPNGRELDNPHYAYKLDWLATLAEQGR-- 150 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEK 241 W++ +S + GD+N + + + + + R ++ Sbjct: 151 -TWLS---DSQALIALVGDWN--VAPHDEDVWDMSVFEGSTHVSRAERDA 194 >gi|238883835|gb|EEQ47473.1| conserved hypothetical protein [Candida albicans WO-1] Length = 891 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 32/102 (31%), Gaps = 6/102 (5%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V++ V+ + + N+ + + + + I + HL + Sbjct: 675 FFVKESQVKYVSNVECSFKKTGLGGVSANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEE 734 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + + + ++ ++ + GDFN +I Sbjct: 735 RHQNYKA----LIKGIQFSK--NRRIQNHDAVIWLGDFNYRI 770 >gi|221043532|dbj|BAH13443.1| unnamed protein product [Homo sapiens] Length = 275 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 152 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 202 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 203 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251 >gi|90412320|ref|ZP_01220325.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] gi|90326811|gb|EAS43204.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] Length = 286 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 65/243 (26%), Gaps = 25/243 (10%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + DI LQE + + + + V+ Sbjct: 54 SSIFSEQNIDIAGLQEAFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYVK 113 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLEN 175 P + A + R + +E VL + H F + Sbjct: 114 LGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAH-----FDHIGKV 168 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 S LLS++A+ + + ++ GD N + + + + + + S Sbjct: 169 ARQQSAKLLSKKAKEIIG------DDNDAVIVLGDLNFERSDVASYEALTSLFNDARSTT 222 Query: 236 RFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 P E + K P IDY ++ + ++ G Sbjct: 223 IKPFEGIDGKEYTYHGYFKEPTEDIDYIFVNDK---------LRVNTFKYVNVIKDGIYS 273 Query: 293 SDH 295 SDH Sbjct: 274 SDH 276 >gi|304391132|ref|ZP_07373084.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326015|gb|EFL93261.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 348 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 27/91 (29%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR---------------------- 49 + P T +R+++ N+ + EG + + + R Sbjct: 16 YATPQTLPNPDFLRVITCNLQWGTPAEGWTDVQKANSRAEAFIRGLGERCRSLFKSGSVN 75 Query: 50 -----TTSDYTLLRQYAKNLDADIVFLQEMG 75 T + Q + L DI+ LQE+ Sbjct: 76 TRTQLTEENLKQTAQVLQQLKPDILALQEVD 106 >gi|298345577|ref|YP_003718264.1| putative endonuclease/exonuclease/phosphatase [Mobiluncus curtisii ATCC 43063] gi|298235638|gb|ADI66770.1| possible endonuclease/exonuclease/phosphatase [Mobiluncus curtisii ATCC 43063] Length = 348 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 27/91 (29%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR---------------------- 49 + P T +R+++ N+ + EG + + + R Sbjct: 16 YATPQTLPNPDFLRVITCNLQWGTPAEGWTDVQKANSRAEAFIRGLGERCRSLFKSGSVN 75 Query: 50 -----TTSDYTLLRQYAKNLDADIVFLQEMG 75 T + Q + L DI+ LQE+ Sbjct: 76 TRTQLTEENLKQTAQVLQQLKPDILALQEVD 106 >gi|219126251|ref|XP_002183375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405131|gb|EEC45075.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 808 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 22 QKVRLVSWNI---NTLSEQEGVSLWKNSVK-------RTTSDYTLLRQYAKNLDA--DIV 69 + +VSWN+ S + V+L + K R + +L++ A+ D++ Sbjct: 77 HTISVVSWNMLAEAYCSPRSHVNLPASYRKVVFDRTARRDRIFAILKRLAQQQQPVIDVL 136 Query: 70 FLQEMG 75 LQE+ Sbjct: 137 CLQEVD 142 >gi|68483026|ref|XP_714547.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida albicans SC5314] gi|46436124|gb|EAK95492.1| potential inositol polyphosphate-5-phosphatase Inp51p [Candida albicans SC5314] Length = 986 Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 32/102 (31%), Gaps = 6/102 (5%) Query: 114 IAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 V++ V+ + + N+ + + + + I + HL + Sbjct: 675 FFVKESQVKYVSNVECSFKKTGLGGVSANKGGIAVSFKFSDTTICFVSAHLAAGLSNIEE 734 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKI 215 + + + ++ ++ + GDFN +I Sbjct: 735 RHQNYKA----LIKGIQFSK--NRRIQNHDAVIWLGDFNYRI 770 >gi|315656033|ref|ZP_07908931.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490097|gb|EFU79724.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 348 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 27/91 (29%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR---------------------- 49 + P T +R+++ N+ + EG + + + R Sbjct: 16 YATPQTLPNPDFLRVITCNLQWGTPAEGWTDVQKANSRAEAFIRGLGERCRSLFKSGSVN 75 Query: 50 -----TTSDYTLLRQYAKNLDADIVFLQEMG 75 T + Q + L DI+ LQE+ Sbjct: 76 TRTQLTEENLKQTAQVLQQLKPDILALQEVD 106 >gi|298368758|ref|ZP_06980076.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282761|gb|EFI24248.1| endonuclease/exonuclease/phosphatase family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 256 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 99/285 (34%), Gaps = 50/285 (17%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA- 81 V + S+N+ +G+S V+ + +L +D+ FLQE+ + Sbjct: 5 PVTVTSYNM-----HKGMSALNRKVQ-----LNSMADALHDLRSDVFFLQEVQGRHQARS 54 Query: 82 -KV--FPKNTWCIFYSTERLINHS--KRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 K+ FP+ F N S K H A+ + L + Sbjct: 55 NKIDGFPEQPHYDFLGERLSYNRSYGKNAVYPQRHHGNAILSRLPIET-----LHNLNIT 109 Query: 137 FSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWIT 196 +R R + V G + ++ + C +L ++Q + + ++++ Sbjct: 110 VNRLEQRGVLHCEVLPEGWETSLVCL-----CAHLNLREPDR------AKQYRAIFEYVS 158 Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKT-IDPNDSLIRFPKEKDSRCNANKNLRNKI 255 + P +IAGDFN D K+ + +L D K +++ Sbjct: 159 MHVDPASPLIIAGDFN---------DWREKSALSLGKALNLDEVFVDGNGRRPKTFPSRM 209 Query: 256 PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISI 300 P F+ Y + E+L + + LSDH P+S+ Sbjct: 210 P---FLSLDRVYTRNL-----EVLDAQIHNNKHWQHLSDHLPLSV 246 >gi|288549534|ref|ZP_05967343.2| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] gi|288318297|gb|EFC57235.1| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] Length = 354 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 44/200 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM-- 74 ++A ++ VS+NIN L + L + D++ LQE Sbjct: 80 HLALAATMKFVSFNINGLRARPH----------------QLEAIVEQHQPDVIGLQETKV 123 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIA-VRKKNVRVLQQSYPLLG 132 + +V + H +A + K+ +++ +P Sbjct: 124 HDDMFPLEEVAKLGYNVFY-------------HGQKGHYGVALLTKETPVSVRRGFPGDD 170 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 + RR + + I V++ F + ++ Q L+ Sbjct: 171 GEAQ------RRIIMAEIPSPLGNITVIN-----GYFPQGESRDHPTKFPAKAKFYQDLQ 219 Query: 193 DWITQKKESLVPFVIAGDFN 212 D++T + P +I GD N Sbjct: 220 DYLTAELNKENPVLIMGDVN 239 >gi|118361195|ref|XP_001013828.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295595|gb|EAR93583.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 277 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 37/191 (19%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 L++ N D D + +QE+ + + E + + + + Sbjct: 57 LKKIFLNYDPDFICMQEVTQPFLIQ---------LAQDKEICQKYYFSSPFVNQYDVFIL 107 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 K + Q +P ++ + IN +KI + HL+S L+N Sbjct: 108 SKYPISFKQMFFPSQMGRNLL------FG---EININNRKIVIGTTHLES------LKNN 152 Query: 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNR---KINYLGNND--DFWKTIDPN 231 + +Q + I + S + GDFN + D WK + PN Sbjct: 153 DNYR----MEQLKI----IKELLSSYDESIFMGDFNMSKLNEEQSIPENYIDIWKALHPN 204 Query: 232 DSLIRFPKEKD 242 + K Sbjct: 205 EEGHTMQASKK 215 >gi|291568366|dbj|BAI90638.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 497 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + + ADI+ QE+ A+ ++ + + + + + + Sbjct: 208 SRQLETMQADIIGFQEIFHPEALQEILAATPFY-----DHAHLITTNPRGDKPVVGLCSK 262 Query: 118 KKNVR-VLQQSYPLLGAKDSFS-----RAGNRRAVELLVEINGK-KIWVLDIHLKS---- 166 + + +P D +R + + +++ + V +HLKS Sbjct: 263 LPIISWQIYDKFPPESQIDIEGTIIPINHFSRPVLAVNIQLQDHLQCTVFVVHLKSQRPK 322 Query: 167 ---FCFLDSLENTYSPSCSLLSQQAQW--------LKDWITQKKESLVPFVIAGDFN 212 L ++A LK W S P ++ GDFN Sbjct: 323 IPEGVDSQDPVEKAKGKVRSLLRRAAEATALRYIMLKTW----SHSQNPIILLGDFN 375 >gi|150866100|ref|XP_001385585.2| phospholipase C type enzyme [Scheffersomyces stipitis CBS 6054] gi|149387356|gb|ABN67556.2| phospholipase C type enzyme [Scheffersomyces stipitis CBS 6054] Length = 442 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 66/311 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA-DIVFLQEMGSYNAVAK 82 + L W + +S K +R + L A D DIV LQE+ Sbjct: 28 LTLNCWGLKYIS--------KFRRQRLRAIANKLAYPATKDDEYDIVALQEV-------- 71 Query: 83 VFPKNTWCIFYSTERLINHSKRDSNNDIHTA----IAVRKKNVRVLQQSYPLLGAKDSFS 138 + ++ W T + + +R + I T + + +P+ G +F Sbjct: 72 -WCEDDWKYLDGTCKKVYPYRRVFKSGIVTGPGLVLLSKIPIDESFLYRFPINGRASAFF 130 Query: 139 RAGNRRAVELLV------EINGKKIWVLDIHLKSFCFLDSLENTYS--PSCSLLSQQAQW 190 R + + + I +L+ H+ + + S EN+YS +C QA Sbjct: 131 RGDWLVGKSIAITLLKPHQPGAMPIALLNSHMHAP-YAQSGENSYSTHRAC-----QAWD 184 Query: 191 LKDWITQKKESLVPFVIAGDFNRKINYLG----------NNDD----------------F 224 + + S + GD N K L ++ Sbjct: 185 FAKLVKMLRRSGYAVIQVGDLNSKPGSLPYKLFTVEGGLSDSWDLCYDKESQLTIEDLAA 244 Query: 225 WKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDD 284 + ++ + + A+ ++R+ +DY ++D + K + + + E Sbjct: 245 MQPLEQIHKAGTTVNNQLNTWRAHSDIRDACRLDYALIDAHNIKPISAA----VKFTEKL 300 Query: 285 IKSRGKRLSDH 295 SDH Sbjct: 301 PPPYNCSFSDH 311 >gi|315656090|ref|ZP_07908981.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493092|gb|EFU82692.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 348 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 27/91 (29%) Query: 12 FLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKR---------------------- 49 + P T +R+++ N+ + EG + + + R Sbjct: 16 YATPQTLPNPDFLRVITCNLQWGTPAEGWTDVQKANSRAEAFIRGLGERCRSLFKSGSVN 75 Query: 50 -----TTSDYTLLRQYAKNLDADIVFLQEMG 75 T + Q + L DI+ LQE+ Sbjct: 76 TRTQLTEENLKQTAQVLQQLKPDILALQEVD 106 >gi|313625229|gb|EFR95070.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL J1-023] Length = 256 Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 16/110 (14%) Query: 200 ESLVPFVIAGDFN-----RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNK 254 P +I GDFN NY+ + I + I+ P + Sbjct: 157 AGDSPVIILGDFNTAPNTTTYNYITKKYRDAQLISQ--TPIKGPIGSFHDFQPLRPENEL 214 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDY + + Y + G SDH P++ ++ Sbjct: 215 EKIDYIFVS---------KELRVCSYKTITDQVDGCSASDHFPVTATLEW 255 >gi|55620521|ref|XP_516558.1| PREDICTED: similar to DNase1-Like III protein isoform 5 [Pan troglodytes] Length = 275 Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 28/114 (24%) Query: 203 VPFVIAGDFNRKINYLGNNDD-----------FWKTIDPNDSLIRFPKEKDSRCNANKNL 251 F+ GDFN +Y+ W D D+ +K + C Sbjct: 152 ENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDT----TVKKSTNCA----- 202 Query: 252 RNKIPIDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ +S S + + + + L SDH P+ Sbjct: 203 -----YDRIVLRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKL 251 >gi|21673785|ref|NP_661850.1| hypothetical protein CT0957 [Chlorobium tepidum TLS] gi|21646913|gb|AAM72192.1| hypothetical protein CT0957 [Chlorobium tepidum TLS] Length = 344 Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 92/331 (27%), Gaps = 79/331 (23%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYT-----------------LLRQYAKNL 64 Q++ ++ WN+ L + KN K ++T + Q + Sbjct: 31 QQILVMWWNVENLFDT------KNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQVFNAI 84 Query: 65 DA--------DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 A DIV E + +VF + +T + H D I +A Sbjct: 85 RAEREYGKYPDIVAFAETEN----RQVFAGTLAALDRATYAIDYHESPDPR-GIDIGLAW 139 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEIN-----GKKIWVLDIHLKSFCFLD 171 + G+K R NRR ++ VL+ H S F Sbjct: 140 N-------PATVKFTGSKPYKVRLNNRRGTRFVIAAGFTAASNHFTIVLN-HWPSRSFDT 191 Query: 172 SLENTYSPSCSLLSQQAQWLKDWITQKKESLVP-FVIAGDFNRKINYLGNNDDFWKTIDP 230 T + + +++ + + + ++ GDFN + D + D Sbjct: 192 QWSETNRIAAARVARHIVD-----SLRTCNPQSEIIVMGDFNDQPENHSVKDVLGSSFDR 246 Query: 231 NDSLIRFPKEKDSRCN-----ANKNL--RNKIPIDYFVMDQNAYKF----LIQESFSEI- 278 ++ C + ID ++ + + SF Sbjct: 247 -KAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFS 305 Query: 279 -----------LYNEDDIKSRGKRLSDHCPI 298 LY+ SDH P+ Sbjct: 306 IPAMFDRFGKGLYSTYKQGKFKGGYSDHLPL 336 >gi|313498066|gb|ADR59432.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 264 Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 82/258 (31%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAKVFPK----NTWCIFY-STERLINHSKRDSNN 108 LR+ ++ ADIVFLQE+ +A +P + + S + + Sbjct: 45 LREAVRSTQADIVFLQEVLGSHDRHAAR--YPGWPQTSQYEFLADSMWSDFAYGRNAVYP 102 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 D H A+ K + ++ D RR + +L ++ + +HL Sbjct: 103 DGHHGNALLSKYPIIEHRNL------DVSITGPERRGLLHCVLEVPGQGQVHAVCVHL-- 154 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 LE+ LL + L P +IAGDFN D Sbjct: 155 ----SLLESHRQKQLQLLRKLLDALPA--------NAPVIIAGDFN---------DWKSH 193 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + L R E R + + + +D+ + + + Sbjct: 194 G-NRTLGLQRDLHEAFERHHGHLARTYPARLPLLRLDRIYLRNAESHGPRILGHKP---- 248 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 249 --WSHLSDHLPLAVEVRL 264 >gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6] Length = 250 Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 11/50 (22%) Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 IDYF++ + ++ SDHCP+ +D D Sbjct: 212 WRIDYFIVSNRIADKIKAAEIHNEVFG-----------SDHCPVELDIDL 250 >gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] Length = 259 Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 33/129 (25%), Gaps = 35/129 (27%) Query: 200 ESLVPFVIAGDFN---------------RKINYLGNNDDFWKTIDPNDSLIRFPKEKDSR 244 ++ P + GDFN + + + + F + Sbjct: 142 DAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERASFTKLLNTGFTDTFRAAHPTL 201 Query: 245 CNANKNLRNK---------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 +A + IDYF++ + +Y SDH Sbjct: 202 TDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDARIHADVYG-----------SDH 250 Query: 296 CPISIDYDF 304 CP+ + Sbjct: 251 CPVGLTITL 259 >gi|46108722|ref|XP_381419.1| hypothetical protein FG01243.1 [Gibberella zeae PH-1] Length = 1308 Score = 37.0 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 55/274 (20%) Query: 65 DADI--VFLQEMG--SYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT-------- 112 DI V QE+ S + P + +R +N ++ + + Sbjct: 677 QPDIFVVGFQEIVELSPQQIMNSDPSRKNLWEQAVKRNLNERQKRLGGERYVLLRSGQLV 736 Query: 113 ----AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 I V+ ++ ++ + AGN+ AV + + I + HL + Sbjct: 737 GAALCIFVKTPSLASIKNVEGSVKKTGMSGMAGNKGAVAIRFDYANTHICFVTAHLAAG- 795 Query: 169 FLDSLENTYSPSCSL----LSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGN---- 220 F + + + + L Q + + + GDFN +I Sbjct: 796 FSNY--DERNRDYATIHHGLRFQR-------NRGIDDHDAVIWLGDFNYRIGLNSETARA 846 Query: 221 --NDDFWKTIDPNDSLIR-------FPKEKDSRCNANKNLRNKIPIDYFVMDQNA----- 266 ++T+ ND L FP ++R + I D + + A Sbjct: 847 LVKKRDFETLYENDQLNLQMVAGLSFPFYSEARITFPPTYKFDIGTDNYDTSEKARIPAW 906 Query: 267 --YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++LYN +K SDH P+ Sbjct: 907 TDRILRKGSNLRQLLYNSAPLK-----FSDHRPV 935 >gi|26990757|ref|NP_746182.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440] gi|148547022|ref|YP_001267124.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] gi|24985756|gb|AAN69646.1|AE016599_1 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148511080|gb|ABQ77940.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] Length = 264 Score = 37.0 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 82/258 (31%), Gaps = 48/258 (18%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAKVFPK----NTWCIFY-STERLINHSKRDSNN 108 LR+ ++ ADIVFLQE+ +A +P + + S + + Sbjct: 45 LREAVRSTQADIVFLQEVLGSHDRHAAR--YPGWPQTSQYEFLADSMWSDFAYGRNAVYP 102 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 D H A+ K + ++ D RR + +L ++ + +HL Sbjct: 103 DGHHGNALLSKYPIIEHRNL------DVSITGPERRGLLHCVLEVPGQGQVHAVCVHL-- 154 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 LE+ LL + L P +IAGDFN D Sbjct: 155 ----SLLESHRQKQLQLLRKLLDALPA--------NAPVIIAGDFN---------DWKSH 193 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK 286 + L R E R + + + +D+ + + + Sbjct: 194 G-NRTLGLQRDLHEAFERHHGHLARTYPARLPLLRLDRIYLRNAESHGPRILGHKP---- 248 Query: 287 SRGKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 249 --WSHLSDHLPLAVEVRL 264 >gi|312130952|ref|YP_003998292.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311907498|gb|ADQ17939.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 274 Score = 37.0 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 91/302 (30%), Gaps = 67/302 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE-----MGSY 77 ++ + S+N+ + ++G + W N ++++ K + DI QE + Sbjct: 20 ELIVASYNLRMDTPKDGPNAWPNRK-------EMVKELIKYHEFDIFGTQEGFIHQLNDI 72 Query: 78 NAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY------PLL 131 + + + S + S AI RKK ++L P Sbjct: 73 SELK------EYAFTGSGRDDGKQAGEHS------AIFYRKKRFKLLDSGDFWLSEDPDK 120 Query: 132 GAKDSFSRAGNRRAVELLVEI--NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 K + NR A + K + ++H F S Q Sbjct: 121 PGKGWDATCCNRIASWGKFKDLKTKKTFYFFNVH-----FDHQGIVARRES-------GQ 168 Query: 190 WLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD-------FWKTIDPNDSLIRFPKEKD 242 + I Q+ P ++ GDFN L D + + P Sbjct: 169 LMISKI-QEIAGKFPVILTGDFN----SLPETDQIKAISGLLKDAYTSSIAPPYGPVGTA 223 Query: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 + + L+N+ IDY + + + Y + SDH PI+ Sbjct: 224 NSFKLDAPLKNR--IDYIFVSG---------TMEVLKYASLTDHKDQRYPSDHLPIAAKI 272 Query: 303 DF 304 F Sbjct: 273 RF 274 >gi|21233468|ref|NP_639385.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770432|ref|YP_245194.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|188993642|ref|YP_001905652.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|21115315|gb|AAM43267.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575764|gb|AAY51174.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|167735402|emb|CAP53617.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 259 Score = 37.0 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 48/192 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ + L+Q+ + D+V +QE Sbjct: 1 MKIASWNVNSLNVR----------------LPHLQQWLADFAPDVVGIQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 + + + + +A+ ++ + Q P A Sbjct: 37 --LEDHKFPDAALAALGYRSVFCGQKTYNGVAILSRSPALEVQMGIPGFDDVQQRVIAAT 94 Query: 143 RRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + L +NG+ + D + + DWI Q+ + Sbjct: 95 VDGVRIINLYVVNGQDV-----------GTDKYAYKLRW--------LEAVHDWIAQELQ 135 Query: 201 SLVPFVIAGDFN 212 V+ GDFN Sbjct: 136 RHPQLVVLGDFN 147 >gi|288800678|ref|ZP_06406135.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288332139|gb|EFC70620.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 270 Score = 37.0 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 101/306 (33%), Gaps = 84/306 (27%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRT-TSDYTLLRQYAKNL---DADIVFLQ 72 K++++++NI R+ D+ + YA+ L +ADI+ L Sbjct: 18 NLFAQDKIKVITFNI-----------------RSFEPDFD-VAPYAELLRSEEADIICLN 59 Query: 73 EMGSYNAVAK-------VFPK-----NTWCIFYSTERLINHSKRDSNNDIH------TAI 114 E+ + ++ + V + N + IF + L N + Sbjct: 60 EVENRSSRQQRDGKFRDVVAELAQKLNMFEIFGYSYNLANKRGEYPEENYRYSLNELYGN 119 Query: 115 AVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLE 174 A+ + + L K S + G A ++L+ K + HL D + Sbjct: 120 AILSRYPILNSNCLQLPRPKGSADQRGVVYA-DILLPT-KKMFRIASTHL------DHMG 171 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND--DFWKTIDPND 232 +QA+ L + S +P ++ GD N+ N ++ +D ++ Sbjct: 172 GQ--------LEQAEVLVS--DKVYTSSIPMILTGDMNQGPGSSVINKIETAFERMDNDN 221 Query: 233 SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRL 292 ID+ + + F ES + D GK L Sbjct: 222 GTYLGL----------------SKIDFIFGSKGKWTF---ESCRVL-----DRFFNGKEL 257 Query: 293 SDHCPI 298 SDHCP+ Sbjct: 258 SDHCPV 263 >gi|73538157|ref|YP_298524.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72121494|gb|AAZ63680.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 653 Score = 37.0 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 88/268 (32%), Gaps = 44/268 (16%) Query: 68 IVFLQEMGSYN-----AVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKN 120 ++ L E+ + AV ++ W + + R + I A+ ++ Sbjct: 341 VIGLMEVENNGYGPHSAVQRLAALMGPGW------RAVDPGTPRLGTDAIAVALLYNQRA 394 Query: 121 VRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS-FCFLDSLENTYSP 179 V+ P D +R + +L+ ++ V++ HLKS C + Sbjct: 395 VK--PVGMPATTVLDMRNRQPLAQTFQLIGNLSQTFTVVVN-HLKSKGCADADGTDRDQG 451 Query: 180 S---C--SLLSQQAQWLKDWITQKKE--SLVPFVIAGDFNRK--------INYLGNNDDF 224 C + S+ A+ L DW+ + ++ GD N + G D Sbjct: 452 DGQGCWNATRSRAARALADWLGTSPTGVANAGKLVIGDLNSYASEDPLTVLAREGYEDIV 511 Query: 225 WKTIDPNDSLIRFPKEKD----SRCNANKNLRNKIP-IDYFVMDQN---AYKFLIQESFS 276 + + F + +A R + I + D+ AY + + Sbjct: 512 ARFAGRDAYTYVFDGRAGYLDYALADAALVPRIRAVSIWHVNADEPVAFAYAQAYRNAAQ 571 Query: 277 EILYNEDDIKSRGKRLSDHCPISIDYDF 304 + Y D R SDH P+ +D + Sbjct: 572 QERYYAPD----AWRASDHDPVLVDLSW 595 >gi|85711701|ref|ZP_01042758.1| Exonuclease III [Idiomarina baltica OS145] gi|85694561|gb|EAQ32502.1| Exonuclease III [Idiomarina baltica OS145] Length = 269 Score = 37.0 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 72/276 (26%), Gaps = 62/276 (22%) Query: 56 LLRQYAKNLDADIVFLQE--MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTA 113 L+ D++ LQE + + + + H Sbjct: 17 QLQAMIDKHQPDVIGLQETKVHDDQFPQQAVEDMGYHV------------NFFGQKGHYG 64 Query: 114 IA-VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDS 172 +A + KK + +Q+ +P ++ +G + VL+ F Sbjct: 65 VALLSKKPLTNVQKGFPNEPEDAQRRMIMGDYPLD-----DGATVRVLN-----GYFPQG 114 Query: 173 LENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN-----RKINYLGNNDDFWKT 227 + + +Q + L +++ P ++ GD N R I N W Sbjct: 115 ESRDHPTKFPMKAQFYRDLINYLNDDLSPEQPVIVMGDMNISHQDRDIGIGETNAKRWLR 174 Query: 228 IDP-----------NDSLIRFPKEKDSRCNANKNLRNKIP--------------IDYFVM 262 N+ L + N ++ ID + Sbjct: 175 TGKCSFLPEERDWLNEVLDWGLIDTYRTLNPEQDNEFSWFDYRSRGFDDNRGLRIDLILA 234 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 Q + D ++ SDH PI Sbjct: 235 TQTLADRCEESGI-------DYELRGIEKPSDHAPI 263 >gi|237821676|ref|ZP_04597521.1| hypothetical protein SpneC19_05102 [Streptococcus pneumoniae CCRI 1974M2] Length = 202 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 17/99 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +IAGDFN + + K D+L P + N+ ID+ ++ +N Sbjct: 121 IIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNSQSPKLFNATIDHILLPKN 176 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y D+ + SDH I + F Sbjct: 177 H-------------YYVKDLDIVSFQNSDHRCIFTEITF 202 >gi|319640027|ref|ZP_07994754.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A] gi|317388305|gb|EFV69157.1| hypothetical protein HMPREF9011_00351 [Bacteroides sp. 3_1_40A] Length = 276 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 11/60 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 45 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 93 >gi|294777430|ref|ZP_06742881.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|294448498|gb|EFG17047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] Length = 276 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 11/60 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 45 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 93 >gi|285017614|ref|YP_003375325.1| hypothetical protein XALc_0819 [Xanthomonas albilineans GPE PC73] gi|283472832|emb|CBA15337.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 289 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 95/296 (32%), Gaps = 45/296 (15%) Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74 P S ++++S+N+ V + KR + + + D+ QE+ Sbjct: 27 PTPTSRPMPLKVMSFNVR-------VPIDTEGDKRWEVRRSAMAVLIRAQHPDLFGTQEL 79 Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV-RKKNVRVLQQSYPLLGA 133 A + R S+ + + + R + + + L Sbjct: 80 IKRQA-------DYLATKLPDYRWFGRSRDGNEDGERMGVFYDRHRLKLLASGDFWLSDT 132 Query: 134 KDSFSRAGNRRAVELLVEI-------NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 + + +V +G++ ++ D HL + + E+ + +L+ Sbjct: 133 PEIPGSISWGHPLPRMVNWGLFERIADGRRFYLFDTHLP---YREQDESARAKGAALILS 189 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCN 246 + + L VP V+ GDFN + D + + P+ ++ + Sbjct: 190 RLRALPA--------NVPVVLTGDFNTVQDSPTYRTLTRTLTDARTQVTQ-PQGPEATFH 240 Query: 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 ++ ID +++ Y D + +G SDH P+ ++ Sbjct: 241 DFTGHPDR-RID----------WILTRGLHATRYATLDARPQGHWPSDHFPVIAEF 285 >gi|254881020|ref|ZP_05253730.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|254833813|gb|EET14122.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] Length = 324 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 11/60 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 93 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 141 >gi|226532622|ref|NP_001141499.1| hypothetical protein LOC100273611 [Zea mays] gi|194704824|gb|ACF86496.1| unknown [Zea mays] Length = 443 Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 27/204 (13%) Query: 15 PCTASVAQKVRLVSWNI---NTLSEQEGVSLWKN-SVKRTTSDYTLLRQYAKNLDADIVF 70 T+S ++S+NI + L R S L+ + ++ D D+V Sbjct: 91 ASTSSSGDACTIMSYNILADYNARNHPDLYLDAPWDAMRWDSRRRLIIREIRHWDPDVVC 150 Query: 71 LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL 130 LQE+ + +A + + AI + K + ++++ Sbjct: 151 LQEVDRFQDIAAGMKSRGYEGIFQRRTGDTRDG--------CAIFWKSKQLHLVEEDSID 202 Query: 131 LGAKDSFSRAGNRRAVELLVEINGKKIWVL-DIHLKSFCFLDSLENTYSPSCSLLSQQAQ 189 + + A + E+NG +VL +IH+ F + +L + A Sbjct: 203 FSEFNLRNNV----AQICVFELNGTHKFVLGNIHV---LFNPKRGDVKLGQIRMLLENAN 255 Query: 190 WL-KDWITQKKESLVPFVIAGDFN 212 L + W +P V+AGDFN Sbjct: 256 ALAEKW------DKIPIVLAGDFN 273 >gi|284054173|ref|ZP_06384383.1| Endonuclease/exonuclease/phosphatase [Arthrospira platensis str. Paraca] Length = 498 Score = 36.6 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 55/177 (31%), Gaps = 31/177 (17%) Query: 58 RQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + + + ADI+ QE+ A+ ++ + + + + + + Sbjct: 209 SRQLETMQADIIGFQEIFHPEALQEILAATPFY-----DHAHLITTNPRGDKPVVGLCSK 263 Query: 118 KKNVR-VLQQSYPLLGAKDSFS-----RAGNRRAVELLVEINGK-KIWVLDIHLKS---- 166 + + +P D +R + + +++ + + V +HLKS Sbjct: 264 LPIISWQIYDKFPPESQIDIEGTIIPINHFSRPVLAVNIQLKDRLQCTVFVVHLKSQRPQ 323 Query: 167 ---FCFLDSLENTYSPSCSLLSQQAQW--------LKDWITQKKESLVPFVIAGDFN 212 L ++A LK W S P ++ GDFN Sbjct: 324 ITEGVDSQDPVEKAKGKVRSLLRRAAEATALRYIMLKTW----SHSQNPIILLGDFN 376 >gi|156975999|ref|YP_001446905.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116] gi|156527593|gb|ABU72678.1| hypothetical protein VIBHAR_04769 [Vibrio harveyi ATCC BAA-1116] Length = 451 Score = 36.6 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 88/291 (30%), Gaps = 50/291 (17%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 +++ ++N+ + + + S L Y D++ LQE S +A Sbjct: 181 HVLQVATYNL-WMIPSVSSDIAARAAMMEHS----LSGY------DVLVLQEAFS-SARD 228 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +F Y T+ + S ++ V +L+ + Sbjct: 229 PMFDALELEYPYQTDVVGGDSA-----ALYDGGVVTLSRYPILETDALVFDHCSGTDCYA 283 Query: 142 NRRAVELLVEINGKKIWVLDIHL----KSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQ 197 ++ V ++ NG+ + + HL S +L++Q Sbjct: 284 DKGIVYTKIDKNGQIYHIFNTHLASFNTSAAKRLRRLQLGLLRTFMLTKQIPA------- 336 Query: 198 KKESLVPFVIAGDFNRKINYLGNNDDFWK------TIDPNDSLIRFPKEKDSRCNANKNL 251 + AGDFN + N DF + T++ + +E + N Sbjct: 337 ----DEAVIYAGDFN-----IDKNSDFMEYFLMLATLEVDPPTYLGYREATFDPSINSYA 387 Query: 252 RNK-------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 K +DY ++ + + ++ + LSDH Sbjct: 388 SAKYSGGSQSEYLDYVLVSSEHRRAFENTNTVKLRQRVSEETWGEWHLSDH 438 >gi|150003751|ref|YP_001298495.1| hypothetical protein BVU_1182 [Bacteroides vulgatus ATCC 8482] gi|149932175|gb|ABR38873.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 247 Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 11/60 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 16 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 64 >gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1] gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1] Length = 1230 Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 19/191 (9%) Query: 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVA 81 + + + S+N+ +E S+ RT + + ADI+ LQE+ Sbjct: 273 ESLAVSSYNVLIGTEYPPTHDRDPSLVRTILSDSAM--------ADILVLQEVSDDFLTY 324 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 + + H I + + +S P A Sbjct: 325 LLGDSEVQRRYPFASHGPPHQPDIGPLPSLRNIVILSRYAFS-WKSVPFHRKHKGALVAS 383 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R + V IHL + ++ S Q + L ++ ++ S Sbjct: 384 FR-GISTSSPSASGTFVVAGIHLTAGLTDGAVAAKKS--------QMKNLTSYL-ERHHS 433 Query: 202 LVPFVIAGDFN 212 P++I GDFN Sbjct: 434 TDPWIITGDFN 444 >gi|260574370|ref|ZP_05842374.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] gi|259023266|gb|EEW26558.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sp. SW2] Length = 238 Score = 36.6 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 89/288 (30%), Gaps = 71/288 (24%) Query: 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA 79 A+ + + S+NI +G+ + D + ADI+ LQE Sbjct: 3 HARDLSVASYNI-----HKGIGADR------RRDLARTAAVIAEIGADILALQEADMR-- 49 Query: 80 VAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK------NVRVLQQSYPLLGA 133 F S L++ + + + +AV+ + + +L L+ Sbjct: 50 ------------FGSRAGLLDLDRLRHDLGL-VPVAVKGQRDSHGWHGNLLLVRDTLVQE 96 Query: 134 KDSFSRAGN--RRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 + G R A+ + I G+ + V+ HL S QAQ L Sbjct: 97 VHQLALPGLEPRGALMTDLVIKGQPLRVISAHL--GLLPGSRAV-----------QAQAL 143 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + P ++ GD N W+ + A+ Sbjct: 144 LAKLNTLER--RPTLLMGDLNE-----------WRDTGSAAMGHFARHFTPASPRASYPA 190 Query: 252 RNK-IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 R +P+D + +I + + D +R SDH PI Sbjct: 191 RYPLLPLD---------RMMICDQGQLLDIATHD-SPLARRASDHLPI 228 >gi|254581358|ref|XP_002496664.1| ZYRO0D05302p [Zygosaccharomyces rouxii] gi|238939556|emb|CAR27731.1| ZYRO0D05302p [Zygosaccharomyces rouxii] Length = 857 Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 54/333 (16%) Query: 20 VAQKVRLVSWNI--NTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS- 76 + ++S+NI + + + L + + DIV LQE+ + Sbjct: 520 AKRSFTIMSYNILCQHYATPKMYRYTPSWALSWDHRRQRLTEEVMSYMTDIVCLQEVEAK 579 Query: 77 ---YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG- 132 + + + +F++ R +DS + ++ ++ + Sbjct: 580 TYEEHWAPLMLKQGYSGVFHAKTRAKTMHSKDSKKVDGCCVFYKESEFKLQFKDEVDFSS 639 Query: 133 ----------AKDSFSRAGNRRAVELLVEIN----GKKIWVLDIHLKSFCFLDSLENTYS 178 +D +RA N+ V + +++N G+ +W+ HL + + + Sbjct: 640 TWMKHKKFQRTEDYLNRAMNKDNVVIYIKLNHLKSGESVWIATTHLH---WDPQFNDVKT 696 Query: 179 PSCSLLSQQAQWLKDWITQKKE-------SLVPFVIAGDFN--------------RKINY 217 +L + L I + P +I GDFN ++ Sbjct: 697 FQVGILMDHLEEL---IKEHGSPSSRQDPKKSPVIICGDFNSQKDSAVYELLSTGHVQSH 753 Query: 218 LGNNDDFWKTIDPNDSLIRFPKEKDSRCNA-----NKNLRNKIPIDYFVMDQNAYKFLIQ 272 + + + + + N IDY A + Sbjct: 754 KDIDGRDFGYMSQKNFAHNLSLKSGYGYIGELPLTNFTPSFTSTIDYIWFSTQALRIRGL 813 Query: 273 ESFSEILYNEDDIKSRGKR-LSDHCPISIDYDF 304 + Y I + SDH PI ++F Sbjct: 814 LGEIDDDYISKFIGFPNDKFPSDHIPILARFEF 846 >gi|16758784|ref|NP_446359.1| deoxyribonuclease gamma precursor [Rattus norvegicus] gi|6647472|sp|O89107|DNSL3_RAT RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNaseY; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; Flags: Precursor gi|3220025|gb|AAC40134.1| DNase gamma [Rattus norvegicus] gi|3395772|gb|AAC28937.1| DNAseY [Rattus norvegicus] gi|56789880|gb|AAH88122.1| Deoxyribonuclease 1-like 3 [Rattus norvegicus] gi|149040086|gb|EDL94170.1| deoxyribonuclease I-like 3 [Rattus norvegicus] Length = 310 Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 6/109 (5%) Query: 197 QKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIP 256 +++ F+ GDFN +Y+ + + + + +++ Sbjct: 181 RRRWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPNFVWLIGDQEDT---TVKKSTSCA 237 Query: 257 IDYFVM-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 D V+ Q ++ S + + S + L SDH P+ Sbjct: 238 YDRIVLRGQEIVNSVVPRSSGVFDFQKAYELSEEEALDVSDHFPVEFKL 286 >gi|54302544|ref|YP_132537.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] gi|46915966|emb|CAG22737.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] Length = 234 Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 66/244 (27%), Gaps = 25/244 (10%) Query: 57 LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + + DI LQE + + + + V Sbjct: 1 MTSIFSEQNIDIAGLQEAFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADKYV 60 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVL--DIHLKSFCFLDSLE 174 + P + A + R + +E VL + H F + Sbjct: 61 KLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAH-----FDHIGK 115 Query: 175 NTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSL 234 S LLS++A+ + + ++ GD N + + + + + + S Sbjct: 116 VARQQSAKLLSKKAKEIIG------DDNDAVIVLGDLNFERSDVASYEALTSLFNDARST 169 Query: 235 IRFPKEKDSRCNANKNLRNKIP---IDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 P E + K P IDY ++ + +I G Sbjct: 170 TIKPFEGIDGKEYTYHGYFKKPTEDIDYIFVNDK---------LRVNTFKYVNIIKDGIY 220 Query: 292 LSDH 295 SDH Sbjct: 221 SSDH 224 >gi|47522808|ref|NP_999156.1| deoxyribonuclease-1 precursor [Sus scrofa] gi|62512132|sp|P11936|DNAS1_PIG RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|15027532|dbj|BAB62268.1| deoxyribonuclease I [Sus scrofa] Length = 284 Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 5/102 (4%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 ++ GDFN +Y+ + + + + + + I V Sbjct: 183 EDIMLMGDFNAGCSYVTTSHWSSIRLRESPPFQWLIPDT-ADTTVSSTHCAYDRI--VVA 239 Query: 263 DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + ++ +S + + S L SDH P+ + Sbjct: 240 GPLLQRAVVPDSAAPFDFQAAFGLSEQTALAISDHYPVEVTL 281 >gi|237724358|ref|ZP_04554839.1| metallophosphoesterase [Bacteroides sp. D4] gi|229437227|gb|EEO47304.1| metallophosphoesterase [Bacteroides dorei 5_1_36/D4] Length = 324 Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 11/60 (18%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++NI + + V D+ + ++ ++V LQE+ S Sbjct: 93 SAQSQNSLRLMTYNIKNANGMDDVC-----------DFQRIADVINHIHPEVVALQELDS 141 >gi|258546221|ref|ZP_05706455.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258518646|gb|EEV87505.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 253 Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 42/200 (21%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 + + SWN+N+L+ + L QY K DI+ LQE+ +A Sbjct: 1 MNITSWNVNSLNVRLPHVL----------------QYLKETAPDILGLQELKQTDAA--- 41 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143 I + + + +A+ + + G D +RA Sbjct: 42 -------IDRTALAAAGYHLESHGQKTYNGVALLAREALTDVVRG-IPGYADEQARA--- 90 Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203 + N + VL++++ + + + TY + +I K Sbjct: 91 ------IAANVGDVRVLNLYVPNGKAVGDEKYTYK------LHWLDAVTRYIDDLKREHP 138 Query: 204 PFVIAGDFNRKINYLGNNDD 223 VI GD+N L +D Sbjct: 139 KLVIIGDYNIAPADLDVHDP 158 >gi|260820543|ref|XP_002605594.1| hypothetical protein BRAFLDRAFT_127308 [Branchiostoma floridae] gi|229290928|gb|EEN61604.1| hypothetical protein BRAFLDRAFT_127308 [Branchiostoma floridae] Length = 287 Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 94/298 (31%), Gaps = 47/298 (15%) Query: 4 KYVLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKN 63 K+ LA + + + +++ ++N+ T + K V +L Q A+ Sbjct: 2 KFGLAFLALGIFALSGACSALKIGAFNVQTF---GRSKMSKPEV------VDILLQIAER 52 Query: 64 LDADIVFLQEM--GSYNAVAKVFP------KNTWCIFYSTERLINHSKRDSNNDIHTAIA 115 DI+ +QE+ ++ A+ N + + S + + AI Sbjct: 53 Y--DILLIQEIRDNTFTAIYSFLDQLNARSGNDYSMLLSERLGRSSYYMEQ-----YAIL 105 Query: 116 VRKKNVRVLQQSYPLLGAKDSFSRAG--NRRAVELLVEINGKKIWVLDIHLKSFCFLDSL 173 R Y D F R R L + + ++ +H Sbjct: 106 YRNDRALTPVGDYHYSDPGDIFHREPYVIRF---LSGTTSVQDFVLVPLH-------ADP 155 Query: 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS 233 E+ + L + L W +I GD N +Y+G++D I ++ Sbjct: 156 EDAVVENNQLYNVYQDALDRW------GDEDILIFGDLNADCSYVGSSDWPGIRIWTDNR 209 Query: 234 LIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKR 291 ++ D V+ + + + S+S Y + ++ +R Sbjct: 210 FQWLI-GNEADTTVKSTH---CAYDRLVVAGSQLQASV-RSYSVFDYKSEYGLTQSER 262 >gi|156309375|ref|XP_001617698.1| hypothetical protein NEMVEDRAFT_v1g225871 [Nematostella vectensis] gi|156195333|gb|EDO25598.1| predicted protein [Nematostella vectensis] Length = 232 Score = 36.6 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 11/71 (15%) Query: 146 VELLVEINGKKIWVLDIHLKS---FCFLDSLENTYSPSCSLLSQQAQWLKDWITQK-KES 201 V + + NG+ + ++ H ++ C + Q L+++I+ + Sbjct: 153 VYVKLNRNGQAVHIIGTHAQAADTGCSDGKGTAVRAS-------QFDELQNFISARGIAL 205 Query: 202 LVPFVIAGDFN 212 I GDFN Sbjct: 206 DQLVFIGGDFN 216 >gi|221119120|ref|XP_002156178.1| PREDICTED: similar to Deoxyribonuclease gamma isoform 1 [Hydra magnipapillata] Length = 98 Score = 36.6 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 GDFN Y+ + + + +D+ +K+ I + Sbjct: 1 MGDFNAGPKYISKKKLDQTELRTDKKFNWLLQNEDT--TVSKSHATLDRI--IITGNAIT 56 Query: 268 KFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 + LI++S ++E+ + L SDH P+ + Sbjct: 57 QALIKDSAGTFNFDEEYKLTLEDALKISDHYPVKFEIS 94 >gi|332203748|gb|EGJ17815.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Streptococcus pneumoniae GA47368] Length = 202 Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 17/99 (17%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +IAGDFN + + K D+L P + N+ ID+ ++ +N Sbjct: 121 IIAGDFNATMRHGA----LAKISSHRDALNVLPPFERGTWNSQSPKLFNTTIDHILLPKN 176 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 Y D+ + SDH I + F Sbjct: 177 H-------------YYVKDLDIVSFQNSDHRCIFTEITF 202 >gi|238650485|ref|YP_002916337.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238624583|gb|ACR47289.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 271 Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 45/192 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ A DI+ LQE S + Sbjct: 1 MKIVTWNINSLRLR----------------IDLLRKLAYEHQPDIILLQETKVADSLFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ K S L + Sbjct: 45 EVIKNIGYEHVIYSGQKS------------YNGVAIISKFPLNNVFSLELY-------NS 85 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ N +I + ++ + D + + + + +++W+T + Sbjct: 86 DKRHIAAIV---NDIEIH--NFYVPAG--GDIPDIEVNTKFKHKLEYVRLMQEWLTTNRT 138 Query: 201 SLVPFVIAGDFN 212 +I GD N Sbjct: 139 KNDKMIIVGDLN 150 >gi|209737554|gb|ACI69646.1| Deoxyribonuclease gamma precursor [Salmo salar] Length = 310 Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFV 261 +I GDFN +Y+ I + + D+ N + + D V Sbjct: 163 DHIMILGDFNADGSYVTKRGMRNIRIRSDKKFHWVIGDDVDTTANTSNDHTY----DRIV 218 Query: 262 M-DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDYD 303 M + ++ S +++ S+ L SDH P+ ++ Sbjct: 219 MYGDDMLNAMVPNSAKPFNFHKAFRLSKAMALSISDHYPVEVELT 263 >gi|162312263|ref|NP_596144.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe 972h-] gi|20138888|sp|O74369|NSMA_SCHPO RecName: Full=Putative neutral sphingomyelinase gi|157310440|emb|CAB39367.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe] Length = 424 Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 26/176 (14%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY---NAVAKVFPKNTWCIFYSTERLINHS 102 S RT + + D DIV LQE+ S + + N + +S Sbjct: 23 SKYRTER-LKAVGEKLAKCDYDIVLLQEVWSIYDFQEIRNLVSCN-----------LVYS 70 Query: 103 KRDSNNDIHTAIAV--RKKNVRVLQQSYPLLGAKDSFSRA----GNRRAVELLVEINGKK 156 + + + +A+ + + YPL G +F R G A L +G+ Sbjct: 71 RFFHSAAMGAGLAMFSKFPIIESSMNKYPLNGRPQAFWRGDWYVGKGVATASLQHPSGRI 130 Query: 157 IWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 I + + HL + + + C LS QA ++ + + + AGDFN Sbjct: 131 ISLFNTHLHA----PYGKGADTYLCHRLS-QAWYISKLLRAAVQRGHIVIAAGDFN 181 >gi|289614844|emb|CBI58381.1| putative synaptojanin-like protein [Sordaria macrospora] Length = 1328 Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 78/277 (28%), Gaps = 61/277 (22%) Query: 65 DADIVF--LQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSN-----------NDIH 111 +IV QE+ N ++ + + R N + Sbjct: 643 QPEIVAIGFQEIVELNP-QQIMNSDPTRKQLWERAIKGTLDRHYNRPDDEKYVLLRSGQL 701 Query: 112 TAIA----VRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSF 167 A V+ + ++ + AGN+ AV + ++ I + HL + Sbjct: 702 VGAALCIFVKASALHNIKNVEGSVKKTGLSGMAGNKGAVAIRLDYANTPICFVTAHLAAG 761 Query: 168 CFLDSLENTYSPSC--SLLSQQAQWLKDWITQKKESLVPFVI-AGDFNRKINYLGNNDDF 224 F + E + L Q + + VI GDFN +I N Sbjct: 762 -FTNYEERNRDYATISHGLRFQ--------RNRGINDHESVIWFGDFNYRIGLDLENT-- 810 Query: 225 WKTIDPNDSLIRFPKE----------------KDSRCNANKNLRNKIPIDYFVMDQNA-- 266 K + L + ++R N + + D F + A Sbjct: 811 -KDLVRKGDLPKLYANDQLNLQMMAGYAFHYYSEARITFNPTYKYDVGTDTFDTSEKARI 869 Query: 267 -----YKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 + ++ YN + R SDH P+ Sbjct: 870 PAWTDRILRKGHNLRQLCYNSAPL-----RFSDHRPV 901 >gi|90579026|ref|ZP_01234836.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] gi|90439859|gb|EAS65040.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] Length = 379 Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 13 LVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQ 72 + Q +R+ +N+ +SE E +++ + T + L ++++AD++ L Sbjct: 4 FLATVLETKQSLRVAMFNVA-MSEPEQGRIFQQTSGLTHKRFQRLAAIIQHVNADVLLLC 62 Query: 73 EMGSYN 78 E Sbjct: 63 EFDHPG 68 >gi|325922607|ref|ZP_08184358.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325546902|gb|EGD18005.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 259 Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 60/208 (28%), Gaps = 49/208 (23%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ + L+Q+ D+V +QE Sbjct: 1 MKIASWNVNSLNVR----------------LPHLQQWLGTFAPDVVGIQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 + + + +A+ ++ + Q P A Sbjct: 37 --LEDHKFPDAALAAAGYRSVFCGQKTYNGVAILSRSPALDVQMGIPGFDDVQQRVIAAT 94 Query: 143 RRAVELL--VEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V ++ +NG+ + D + +W+ Q+ + Sbjct: 95 VDGVRIVNLYVVNGQDVD-----------TDKYAYKLRW--------LAAVHEWLAQELQ 135 Query: 201 SLVPFVIAGDFNRKINYLGNNDD-FWKT 227 ++ GDFN + +D W Sbjct: 136 KYPQLMVLGDFNIAPDARDVHDPSVWNE 163 >gi|332307725|ref|YP_004435576.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175054|gb|AEE24308.1| Endonuclease I [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1500 Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 109/338 (32%), Gaps = 77/338 (22%) Query: 24 VRLVSWNI----NTLSEQEGVSLWKNSVKR---TTSDYTL-----LRQYAKNLDADIVFL 71 +++ S N+ NTL + N R + ++ L +DADIV L Sbjct: 1112 LKVASLNVLNYFNTLDVSPNLCGPSNLECRGADSEEEFERQRAKTLAALLA-MDADIVGL 1170 Query: 72 QEMGS------------YNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHT------- 112 E+ + + + V NT+ + + + + S I+ Sbjct: 1171 MEVENNGFGTSSAVGDLVSGLNDVLGANTYAVVDAGSAIG--TDAISVALIYKPAVVSAI 1228 Query: 113 -AIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKS---FC 168 A A+ + + PL + + A + N +++ + H KS C Sbjct: 1229 GAPAILDSSNSISDDDGPLFLDTKNRPALNQKFA----LTENNEELVISVNHFKSKGSSC 1284 Query: 169 -FLDSLENTYSPSCS-LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 D T +C+ ++ AQ L +++++ P +I GD N Y + K Sbjct: 1285 GAGDDDTTTGQGNCNLTRTRAAQALTTFLSEQFAE-TPKLIIGDLN---AYALE-EPILK 1339 Query: 227 TIDPNDSLIRFPKEKDSRCNANKNLRNK-----IPIDYFVMDQNAYKFLIQESFSEILYN 281 ++ + ++ ++ +D+ + ++ + I + Sbjct: 1340 ILEQGYT------NLANKFGGDEAYSYSFGGEFGYLDHALASAELVDKVVDTTEWHINAD 1393 Query: 282 EDDIKSR-----------------GKRLSDHCPISIDY 302 E + R+SDH P+ I Sbjct: 1394 EPIVFDYNVEFKSEQQHIDYYAPDAYRMSDHDPVVISL 1431 >gi|86358327|ref|YP_470219.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CFN 42] gi|86282429|gb|ABC91492.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CFN 42] Length = 369 Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 33/296 (11%), Positives = 77/296 (26%), Gaps = 63/296 (21%) Query: 70 FLQEMGSYNAVA--------KVFPKNTWCIFYSTERLINHS------KRDSNNDIHTAIA 115 LQE+ + A+ ++ F + ++ + + Sbjct: 75 CLQEIDNMAALQAFEYGYLFRMVGNGYRQKFLVEGNDSRGIDVAVLMREETRDGQKIEVK 134 Query: 116 VRKKNVRVLQQSYPLLG-----AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFL 170 + + + + L + R +EL + I G+ + + +H KS Sbjct: 135 DIRSHAMKTYRDFDLFDEDLALTNRIDDKIFKRDCLELDLLIGGRPLSLYVVHFKSMGNP 194 Query: 171 DSLENTYSPSCSLLSQQAQWLKDWITQK----KESLVPFVIAGDFN-------------- 212 + + L +A+ ++ I + + + F I GD N Sbjct: 195 RDGLDGRQSTLPLRRAEARAVRRIIEDRFGAGRTAKKSFAICGDMNDYQERVDVVGRRGA 254 Query: 213 -RKINYLGNNDDFWKTIDPND----------SLIRFPKEKDSR------CNANKNLRNKI 255 + + + + L R+ C + + Sbjct: 255 GYRFEHQPEAESALDVFSHDGFAENVVVRRQPLDRWTLYHARGPQEQHLCQLDYIWLSPA 314 Query: 256 PIDY-------FVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 + + + Y+ + Y SDHCP+ + D Sbjct: 315 LAAHNSGRVPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKA--SDHCPVVMTLDL 368 >gi|311745839|ref|ZP_07719624.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|311302431|gb|EAZ80320.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 286 Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 89/306 (29%), Gaps = 60/306 (19%) Query: 16 CTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMG 75 S AQ ++NI + + +LW+N + + + + +IV +QE Sbjct: 23 SLMSQAQTHNFATFNIRYANNNDVGNLWENRLP-------EVSKLIQFHQIEIVGIQE-- 73 Query: 76 SYNAVAKVFPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 +V + + + AI + N ++L L Sbjct: 74 --GLHDQVVGLSNSLGYSFIGVGRDDGTEKGE------YAAILYNQDNFKLLDSGTFWLS 125 Query: 133 AKDSFSRAGNRRAVELLVEIN------GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQ 186 G A+ + G ++ +IH + + S L+ Sbjct: 126 PTPEKPSKGWDAALNRICTWGKFQDREGVTFFIFNIH-----YDHIGQQAREESSKLVMN 180 Query: 187 QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDS-------LIRFPK 239 Q L P ++ GDFN + ++ + TI N + Sbjct: 181 QVAKLN-------PEGAPAIMMGDFN-----VTPDNPAYTTITSNPAWKDSRLISKIPSY 228 Query: 240 EKDSRCNANKNLRNKI-PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 R ID+ + E + +++ K SDH P+ Sbjct: 229 GPKGTFTGFDWERMPDGIIDHVFVYGPI------EVIRHGILSDNYGKKYP---SDHFPV 279 Query: 299 SIDYDF 304 ++ DF Sbjct: 280 LVELDF 285 >gi|91095311|ref|XP_973868.1| PREDICTED: similar to reverse transcriptase homolog [Tribolium castaneum] gi|270017183|gb|EFA13629.1| hypothetical protein TcasGA2_TC005274 [Tribolium castaneum] Length = 971 Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 19/103 (18%) Query: 206 VIAGDFNRKINYLGNNDDFWKT-----IDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF 260 +I GDFN + + D ID +L + S + N +D+ Sbjct: 134 IILGDFNAR--HTDFGDTLTNRNGHILIDAISNLPLYRIPNSSPTHINHWEGY-SIVDHI 190 Query: 261 VMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 ++ + + SDH P+ D Sbjct: 191 LVTDSLSNRASDSANIGTTIT-----------SDHLPLVFDLS 222 >gi|166363682|ref|YP_001655955.1| hypothetical protein MAE_09410 [Microcystis aeruginosa NIES-843] gi|166086055|dbj|BAG00763.1| unknown protein [Microcystis aeruginosa NIES-843] Length = 313 Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 28/108 (25%) Query: 206 VIAGDFN--------RK--INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR-NK 254 VI GDFN R IN + + ++ + E S + + + K Sbjct: 220 VIMGDFNLTSWSIYFRNFIINSGLRSVNLGHGLN---PTWFYTDEARSLSHLDHWKQALK 276 Query: 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302 IPID+ + QN D + + +SDH P+ Sbjct: 277 IPIDHIFVSQNVR--------------VDQVITLPSGVSDHRPVIAKL 310 >gi|224477773|ref|YP_002635379.1| hypothetical protein Sca_2291 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422380|emb|CAL29194.1| hypothetical protein SCA_2291 [Staphylococcus carnosus subsp. carnosus TM300] Length = 228 Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 27/200 (13%) Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFC 168 D +TA++ +K N+ P ++ + +R+ + + GK++ + H S Sbjct: 33 DANTAVSYQKGNLT----RNPGRIDPNNPAFIDSRKPLAAQFKFRGKQVIAIANHWNSKN 88 Query: 169 FLDSLENTYSPSCSLLSQQAQWLKDWITQ-----KKESLVPFVI-AGDFNRKINYLGNND 222 D+L P +Q + +++ K+++ ++ GDFN D Sbjct: 89 GDDALFGKNQPVNLGSEKQRVEIAKAVSRFVTQVKQDNPKANIVALGDFN---------D 139 Query: 223 DFW----KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEI 278 W KT++ N + + N +D+ V+ N L S ++ Sbjct: 140 FQWSQPLKTLEGNQMTDLVNSVPQNERYSYVYQGNSQSLDHVVVSNN----LAPHSKLDM 195 Query: 279 LYNEDDIKSRGKRLSDHCPI 298 ++ D R SDH P+ Sbjct: 196 VHVNSDFTDMSGRASDHDPL 215 >gi|150024176|ref|YP_001295002.1| exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] gi|149770717|emb|CAL42181.1| Exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] Length = 253 Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 74/261 (28%), Gaps = 60/261 (22%) Query: 65 DADIVFLQEMGSYNAVAKVFPKNT-------WCIFYSTERLINHSKRDSNNDIHTAIAVR 117 + D++ LQE+ A P + + ++S ++ ++ +A+ Sbjct: 27 NPDVICLQEI---KATQDQIPTDAITAAGYPYQYYFSAQKKG-----------YSGVAIL 72 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTY 177 K + D R + ++ + ++ ++L S ++ L++ + Sbjct: 73 CKTEPKNIVFGTEIDHMDFEGRN---------IRVDFDDLSIMSLYLPSGTNIERLDHKF 123 Query: 178 SPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN--------RKINYLGNNDDFWKTID 229 +++I K + +I GD+N F Sbjct: 124 MF--------MDDFQNYINNLKTKIPNLIICGDYNICHEAIDIHNPTQNAKTSGFLPEER 175 Query: 230 PNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR- 288 S + NK P Y A + + + Sbjct: 176 A-----WLDAFIKSGFVDSFRHFNKEPHHYSWWSYRAGARGNNKGWRIDYNLVSETLKER 230 Query: 289 --------GKRLSDHCPISID 301 + SDHCP+ ++ Sbjct: 231 IKRAIILPDAKHSDHCPVLVE 251 >gi|157825475|ref|YP_001493195.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] gi|157799433|gb|ABV74687.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] Length = 277 Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 93/309 (30%), Gaps = 78/309 (25%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM---GSYNAV 80 +++V+WNIN+L + LLR+ DI+ LQE S + Sbjct: 1 MKIVTWNINSLRLR----------------IDLLRKLVYEHQPDIILLQETKVSDSLFPL 44 Query: 81 AKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRA 140 + + YS ++ + +A+ K S L + Sbjct: 45 EVIKNIGYEHVIYSGQKS------------YNGVAIISKFPLNNVFSLELY-------NS 85 Query: 141 GNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 R ++ N +I + ++ + D + + + + +++W+T + Sbjct: 86 DKRHIAAIV---NDIEIH--NFYVPAG--GDIPDIDANLKFKHKLEYVRLMQEWLTTNRT 138 Query: 201 SLVPFVIAGDFN--------------RK-INYLGNNDDFWKTIDP-----NDSLIRFPKE 240 +I GD N R I++ + + S P + Sbjct: 139 RNDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLSFIDSSRYFVPLD 198 Query: 241 KDSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSD 294 + + K +D+ + N L +L D + SD Sbjct: 199 EKFYTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDALFS---MHLLSEARDWL----QPSD 251 Query: 295 HCPISIDYD 303 H P + D Sbjct: 252 HVPYFVTLD 260 >gi|56342181|dbj|BAD73858.1| deoxyribonuclease I [Triakis scyllium] Length = 281 Score = 36.2 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 97/308 (31%), Gaps = 44/308 (14%) Query: 7 LALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA 66 + + C A + + ++NI + ++ T L+++Y Sbjct: 3 RLITALTLTCLMGAASSIHISAFNI---RAFGDSKMSHPTI--TNIIVNLIQRY------ 51 Query: 67 DIVFLQEMGSYN-AVAKVF------PKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKK 119 DI+ +QE+ + + K+ + ++ L + S ++ R Sbjct: 52 DIILIQEVRDADLSAVKILMNKLNSASAQAFSYITSVPLGHSSYKERYL-----FVYRNS 106 Query: 120 NVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 V V+ +Y A ++ NR + I I + SP Sbjct: 107 VVSVVD-NYLYSDASNTGQDTFNREPFLVKFSSPYSVIRDFVI----------MPMHTSP 155 Query: 180 SCSLLSQQAQWL-KDWITQKKESL-VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRF 237 S ++ ++ L ++ KK+ +I GD N +Y+ D + + Sbjct: 156 SVAV--REIDALYDVFLDAKKKLGTDNMLIMGDLNADCSYVKPTDWAHIRLRKDRQFQWL 213 Query: 238 PKEKDSRCNANKNLRNKIPIDYFV-MDQNAYKFLIQESFSEILYNE--DDIKSRGKRLSD 294 + + + K D + + +I S + + + +SD Sbjct: 214 IPDSADT---STTITTKCAYDRIIAVGSEMKNAIIDGSAAIYNFTSVLNLNNKMTAAVSD 270 Query: 295 HCPISIDY 302 H P+ + Sbjct: 271 HYPVEVRL 278 >gi|260824621|ref|XP_002607266.1| hypothetical protein BRAFLDRAFT_125173 [Branchiostoma floridae] gi|229292612|gb|EEN63276.1| hypothetical protein BRAFLDRAFT_125173 [Branchiostoma floridae] Length = 363 Score = 36.2 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 90/321 (28%), Gaps = 65/321 (20%) Query: 6 VLALVFFLVPCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLD 65 V L + + + +++ ++NI +D +L + Sbjct: 5 VTLLALSMSLSAMTSVEALKIGAFNIQIFGTN-------KMENGDVAD--MLVKICMRY- 54 Query: 66 ADIVFLQEMGS------YNAVAKV--FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVR 117 DI+ +QE+ + + +V + + S +SK A R Sbjct: 55 -DILLIQEIRDNEGTAILDLLDRVNRAGPADYAMVISDRLGRTNSKEQ------YAFFYR 107 Query: 118 KKNVRVLQQSYPLLGAKDSFSRAG-NRRAVELLVEINGKKIW---VLDIHLKSFCFLDSL 173 L SY +S R + N + ++ IH Sbjct: 108 TDVGLTLTNSYHYDDGDESTGNDTFQREPFIVRFSSNRTVVDDFVLVAIH---------- 157 Query: 174 ENTYSPSCSLLSQ----QAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDD----FW 225 + S L + + + W + + +I GDFN +++ W Sbjct: 158 -TDPQEAVSELQELDSVRENIVSKW---RITN---IMILGDFNADCDFVRPIHWDTIPLW 210 Query: 226 KTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNA-YKFLIQESFSEILYNEDD 284 D LI + + D V+ + ++ S + D Sbjct: 211 TRYRTYDWLIGDDVDTTTTSTDCAY-------DRIVVSGPSLRGGIVLNSAGVYDFPNDL 263 Query: 285 IK---SRGKRLSDHCPISIDY 302 +SDH P+ +D Sbjct: 264 NLLCACEALAVSDHYPVEVDL 284 >gi|46395493|ref|NP_996840.1| deoxyribonuclease-1 precursor [Gallus gallus] gi|14194703|sp|Q9YGI5|DNAS1_CHICK RecName: Full=Deoxyribonuclease-1; AltName: Full=Deoxyribonuclease I; Short=DNase I; Flags: Precursor gi|4107168|emb|CAA10503.1| deoxyribonuclease I [Gallus gallus] Length = 282 Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 82/250 (32%), Gaps = 31/250 (12%) Query: 64 LDADIVFLQEM--GSYNAVAKVFP-----KNTWCIFYSTERLINHSKRDSNNDIHTAIAV 116 + DI +QE+ ++V K+ + F S+ L +S ++ I+ Sbjct: 50 VQYDITLVQEVRDADLSSVKKLVSQLNSASSYPYSFLSSIPLGRNSYKEQYVFIY----- 104 Query: 117 RKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW-VLDIHLKSFCFLDSLEN 175 R V VL+ Y G + + +R + ++ + + L + E Sbjct: 105 RSDIVSVLESYYYDDGCESCGTDIFSREPFIVKFSSPTTQLDEFVIVPLHAEPSSAPAEI 164 Query: 176 TYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLI 235 + W + + + F GDFN +Y+ + S Sbjct: 165 NALTDVYT-----DVINKW----ETNNIFF--MGDFNADCSYVTAEQWPSIRLRSLSSCE 213 Query: 236 RFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGK---RL 292 + + + D V +A + ++ + + ++ ++ + K + Sbjct: 214 WLIPDSADTTVTSTDCAY----DRIVACGSALRQAVEYGSATVNNFQETLRIQNKDALAI 269 Query: 293 SDHCPISIDY 302 SDH P+ + Sbjct: 270 SDHFPVEVTL 279 >gi|289666147|ref|ZP_06487728.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670759|ref|ZP_06491834.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 259 Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 82/301 (27%), Gaps = 79/301 (26%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83 +++ SWN+N+L+ + L+Q+ D+V +QE Sbjct: 1 MKIASWNVNSLNVR----------------LPHLQQWLTAFAPDVVGIQETK-------- 36 Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVL-QQSYPLLGAKDSFSRAGN 142 + + + + +A+ ++ + Q P A Sbjct: 37 --LEDHKFPDAALAELGYRSVFCGQKTYNGVAILSRSPALDVQTGIPGFDDVQQRVIAAT 94 Query: 143 RRAVEL--LVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKE 200 V + L +NG+ + D DWI Q+ + Sbjct: 95 VDGVRIINLYVVNGQDV-----------GTDKYAYKLRW--------LAAAHDWIAQQLQ 135 Query: 201 SLVPFVIAGDFNRKINYLGNND-DFWKT--IDPNDSLIRFPKEKDS-------RCNANKN 250 + V+ GDFN + +D W I + ++ + R + Sbjct: 136 TYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAALEKLLALGLHDAFRLHPQAA 195 Query: 251 LRNKI--------------PIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHC 296 + ID ++ ++ D +R SDH Sbjct: 196 EQFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGI-------DREPRTWERPSDHA 248 Query: 297 P 297 P Sbjct: 249 P 249 >gi|50926167|gb|AAH79505.1| Zgc:101000 [Danio rerio] Length = 270 Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 4/99 (4%) Query: 206 VIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQN 265 +I GDFN +Y+ + I + + + + N I + + Sbjct: 164 MILGDFNADGSYVSDKKMKQIRIRSDPEFHWLISDDEDTTASTHNDNTYDRI--VIYGDD 221 Query: 266 AYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 + ++ S + + L SDH P+ ++ Sbjct: 222 MMQAVVPGSAKPFNFQTAFSLTEEDALKVSDHYPVEVEL 260 >gi|148271891|ref|YP_001221452.1| hypothetical protein CMM_0712 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829821|emb|CAN00742.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 276 Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 33/287 (11%) Query: 18 ASVAQKVRLVSWN--INTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM- 74 + + L+S N + +EG + + +L ++ + ++ +QE Sbjct: 10 PTTGDDIHLISLNVRMPWHGTREGEADHWPERQ------EVLTRFLQQERPTVLGVQEAL 63 Query: 75 -GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGA 133 + K P + + + +H + + + + + + +V L P + Sbjct: 64 WPQIQTIEKALPPS-YRMIGQGREGGSHGEHGAIFYQASRLTLLEHDVMWLS-DTPDVIG 121 Query: 134 KDSFSRAGNRRAVELLVEIN--GKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWL 191 ++ R + G + VLD HL + Sbjct: 122 SMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARDRAAE------------AI 169 Query: 192 KDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL 251 + + + +P V+ GDFN ++ D + DS + + Sbjct: 170 AELVRTRFA-GLPLVLIGDFNAPVDSF-PYDALTRRAGLRDS-WLDTARQATPAFGTFPD 226 Query: 252 RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPI 298 +D L+ + +D RG+ +SDH P+ Sbjct: 227 YRPPVVD----GPRIDWILVSDRVDVRAAAVNDFAWRGRMMSDHLPV 269 >gi|88798528|ref|ZP_01114112.1| endonuclease/exonuclease/phosphatase family protein [Reinekea sp. MED297] gi|88778628|gb|EAR09819.1| endonuclease/exonuclease/phosphatase family protein [Reinekea sp. MED297] Length = 273 Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 33/263 (12%), Positives = 78/263 (29%), Gaps = 58/263 (22%) Query: 46 SVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRD 105 R ++ + + ++ D++ LQE+ + F I Y + + Sbjct: 62 PHHRRENNLQQIAELIRHF--DLIALQEVDG-GSFRSQFTN---QIHYLAKAA-DKQFWH 114 Query: 106 SNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLK 165 + + + N + + P+ + + R A+ + + ++ HL Sbjct: 115 QQLNRNLGRMAQHSNGVIGDVT-PVRVSNHALPGIKGRGAIAFELGEKD-PLIIVIAHLA 172 Query: 166 SFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN----RKINYLGNN 221 Q L +I +I GD N R + + Sbjct: 173 LG----------------KKHQDLQL-KYIRNIIRQYNHAIIMGDLNTDSLRILYDSPLH 215 Query: 222 DDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYN 281 D + + + +P + S+C +D ++ Q+ Sbjct: 216 D---CGLKASHARATYPSWQPSKC-----------LDQILVSQHI--------------I 247 Query: 282 EDDIKSRGKRLSDHCPISIDYDF 304 + +SDH P++I+ + Sbjct: 248 IHKVGVLDFMMSDHLPVAIEIEL 270 >gi|167034651|ref|YP_001669882.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] gi|166861139|gb|ABY99546.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] Length = 264 Score = 35.8 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 83/259 (32%), Gaps = 50/259 (19%) Query: 57 LRQYAKNLDADIVFLQEM---GSYNAVAKVFPK----NTWCIFY-STERLINHSKRDSNN 108 LR+ ++ ADIVFLQE+ +A +P + + S + + Sbjct: 45 LREAVRSTQADIVFLQEVLGSHDRHAAR--YPGWPQTSQYEFLADSMWSDFAYGRNAVYP 102 Query: 109 DIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVE--LLVEINGKKIWVLDIHLKS 166 D H A+ K + ++ D RR + +L ++ + +HL Sbjct: 103 DGHHGNALLSKYPIIEHRNL------DVSITGPERRGLLHCVLDVPGQGQVHAICVHL-- 154 Query: 167 FCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWK 226 LE+ LL + L P +IAGDFN WK Sbjct: 155 ----SLLESHRQKQLQLLRKLLDALPA--------DAPVIIAGDFND-----------WK 191 Query: 227 TIDPND-SLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDI 285 T L R E R + + + +D+ + + + Sbjct: 192 THGNRTLGLQRDLHEAFERHHGHLARTYPARLPLLRLDRIYLRNAESHGPRILGHKP--- 248 Query: 286 KSRGKRLSDHCPISIDYDF 304 LSDH P++++ Sbjct: 249 ---WSHLSDHLPLAVEVRL 264 >gi|228924315|ref|ZP_04087565.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835341|gb|EEM80732.1| hypothetical protein bthur0011_52690 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 344 Score = 35.8 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 59/153 (38%), Gaps = 10/153 (6%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTL----LRQYAKNLDADIVFLQEMGSYN 78 ++R ++N+ +E ++ K + +++ + +++ + D++ QE+ S Sbjct: 2 QIRCGTFNLYQFAEPP-FKWYEPGNKYSDAEWLMKKEWIKEQILKMKCDVIGFQEVFSSA 60 Query: 79 AVAKVFPKNTWCIFYS-TERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSF 137 + + + + F + + + AIA + + V P ++ Sbjct: 61 ILKSLVEELGFIHFETVETPVTDIDNPLVFIKPVVAIASKYPIISVNPVKVPDSIMEEIP 120 Query: 138 SRAG---NRRAVELLVEING-KKIWVLDIHLKS 166 A +R ++ + I+G I HLKS Sbjct: 121 VNADFKFSRIPIKATIHIDGSGDIIFYVSHLKS 153 >gi|328697220|ref|XP_001949504.2| PREDICTED: hypothetical protein LOC100162931 [Acyrthosiphon pisum] Length = 1915 Score = 35.8 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 19/111 (17%) Query: 199 KESLVPFVIAGDFNRKINYLGNND-----DFWKTIDPNDSLIRFPKEKDSRCNANKNLRN 253 ++ F+I GDFN G+ + + NDSLI + +R N + Sbjct: 224 QQLPNTFLIVGDFNSHSETWGSYKTDCRGRIIEELLSNDSLIILNNGQPTRINPSNGH-- 281 Query: 254 KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 ID + + L + +I SDH PI I Sbjct: 282 SSAIDLSITNTTLSHKLEWNTLPDIYS------------SDHIPIEISITL 320 >gi|15215119|gb|AAH12671.1| Deoxyribonuclease 1-like 3 [Mus musculus] gi|74178913|dbj|BAE42693.1| unnamed protein product [Mus musculus] gi|74186239|dbj|BAE42910.1| unnamed protein product [Mus musculus] Length = 310 Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 F+ GDFN +Y+ + + + +++ D V+ Sbjct: 187 ENFIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQEDT---TVKKSTSCAYDRIVL 243 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 Q ++ S + + S + L SDH P+ Sbjct: 244 CGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEFKL 286 >gi|84490435|ref|NP_031896.3| deoxyribonuclease gamma precursor [Mus musculus] gi|3913469|sp|O55070|DNSL3_MOUSE RecName: Full=Deoxyribonuclease gamma; Short=DNase gamma; AltName: Full=DNase I homolog protein DHP2; AltName: Full=Deoxyribonuclease I-like 3; Short=DNase I-like 3; AltName: Full=Liver and spleen DNase; Short=LS-DNase; Short=LSD; Flags: Precursor gi|2905788|gb|AAC35753.1| liver and spleen DNase precursor [Mus musculus] gi|4098208|gb|AAD09222.1| DNase gamma [Mus musculus] gi|28192377|gb|AAK07733.1| DNase gamma [Mus musculus] gi|148688630|gb|EDL20577.1| deoxyribonuclease 1-like 3 [Mus musculus] Length = 310 Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 F+ GDFN +Y+ + + + +++ D V+ Sbjct: 187 ENFIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQEDT---TVKKSTSCAYDRIVL 243 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 Q ++ S + + S + L SDH P+ Sbjct: 244 CGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEFKL 286 >gi|239947787|ref|ZP_04699540.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] gi|239922063|gb|EER22087.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] Length = 279 Score = 35.8 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 93/309 (30%), Gaps = 76/309 (24%) Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE--MGSYNAVA 81 +++V+WNIN+L + LLR+ A DI+ LQE + Sbjct: 16 MKIVTWNINSLHLR----------------IDLLRKLAHEHQPDIILLQETKVADSLFPL 59 Query: 82 KVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAG 141 +V + + + +A+ K S L + Sbjct: 60 EVIKNIGYEHVI-----------YAGQKSYNGVAIISKFPLNNAFSLELY-------NSD 101 Query: 142 NRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKES 201 R ++ N +I + ++ + D + + + + +++W+T + Sbjct: 102 KRHIAAIV---NDIEIH--NFYVPAG--GDVPDIEVNTKFKHKLEYVRLMQEWLTTNRTK 154 Query: 202 LVPFVIAGDFN--------------RK-INYLGNNDDFWKTIDP-----NDSLIRFPKEK 241 +I GD N R I++ + + S P ++ Sbjct: 155 NDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNSLGFIDSSRHFVPFDE 214 Query: 242 DSRCNAN------KNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDH 295 + K +D+ + N L +L D SDH Sbjct: 215 KFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALFS---MHLLPEARDWPPP----SDH 267 Query: 296 CPISIDYDF 304 P ++++F Sbjct: 268 VPYFVNFNF 276 >gi|74217725|dbj|BAE33589.1| unnamed protein product [Mus musculus] Length = 310 Score = 35.8 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 203 VPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVM 262 F+ GDFN +Y+ + + + +++ D V+ Sbjct: 187 ENFIFMGDFNAGCSYVPKKAWQNIRLRTDPKFVWLIGDQEDT---TVKKSTSCAYDRIVL 243 Query: 263 -DQNAYKFLIQESFSEILYNEDDIKSRGKRL--SDHCPISIDY 302 Q ++ S + + S + L SDH P+ Sbjct: 244 CGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHFPVEFKL 286 >gi|258564418|ref|XP_002582954.1| predicted protein [Uncinocarpus reesii 1704] gi|237908461|gb|EEP82862.1| predicted protein [Uncinocarpus reesii 1704] Length = 203 Score = 35.8 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 23 KVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDA--DIVFLQEMGSYNAV 80 K+ L++WN++ ++ R + + + Y + + DI+F QE+ + Sbjct: 67 KLVLITWNVD------------SAAPRPEARISAVISYIQRVHPAVDILFFQEVSRPALL 114 Query: 81 A 81 A Sbjct: 115 A 115 >gi|77454655|ref|YP_345523.1| hypothetical protein pREL1_0088 [Rhodococcus erythropolis PR4] gi|77019655|dbj|BAE46031.1| hypothetical protein RER_pREL1-00880 [Rhodococcus erythropolis PR4] Length = 400 Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 5/93 (5%) Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 G F+ + D W D ++ + + + K I + + Sbjct: 63 VGAFSHREESRYGADWEWWISDGSNKWFQLVIQAKKLQTPKAHPAGKYKIKHKIRSSGMQ 122 Query: 268 K-----FLIQESFSEILYNEDDIKSRGKRLSDH 295 + ++S ++ LY + +RG R SDH Sbjct: 123 QIDLLDLYARKSGAQSLYALYNPAARGVRYSDH 155 >gi|229496874|ref|ZP_04390582.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] gi|229316192|gb|EEN82117.1| endonuclease/Exonuclease/phosphatase family protein [Porphyromonas endodontalis ATCC 35406] Length = 343 Score = 35.8 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 68/235 (28%), Gaps = 38/235 (16%) Query: 1 MIRKYVLALVFFLVPCTASV---AQKVRLVSWNINTLSEQEGVS------LWKNSVKRTT 51 M R ++ CT S A ++ + +N+ L + + L + T Sbjct: 1 MNRSIYFFILLIFSVCTLSAQKVAHRIPIAFYNVENLFDCNDDANDDAEFLPDGKREWTE 60 Query: 52 SDYTL--------LRQYAKNLDADIVFLQEMGSYNAVAKVFPKNT-----WCIFYSTERL 98 Y L A A +V L E+ + + + + + + I + Sbjct: 61 ERYQQKLNNLAHVLGDIADKGGA-VVGLAEVENRHVLENLVRNPSIRKRNYSIIHYDSPD 119 Query: 99 INHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIW 158 I A+ K + + + S+ R + I+ + Sbjct: 120 P--------RGIDCALLYDAKIFHLKSSGVRFIALPEE-SKIPTRDILFATGTIDNELFH 170 Query: 159 VLDIHLKSFCFLDSL-ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFN 212 + H S D + + Q A L ++ ++ GDFN Sbjct: 171 FIVGHWPSRYGGDPASAGRRMVAAQTMRQVADSL-----LREYPGSKAILMGDFN 220 >gi|229493269|ref|ZP_04387060.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319771|gb|EEN85601.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 388 Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 5/93 (5%) Query: 208 AGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYFVMDQNAY 267 G F+ + D W D ++ + + + K I + + Sbjct: 51 VGAFSHREESRYGADWEWWISDGSNKWFQLVIQAKKLQTPKAHPAGKYKIKHKIRSSGMQ 110 Query: 268 K-----FLIQESFSEILYNEDDIKSRGKRLSDH 295 + ++S ++ LY + +RG R SDH Sbjct: 111 QIDLLDLYARKSGAQSLYALYNPAARGVRYSDH 143 >gi|265767421|ref|ZP_06095087.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252726|gb|EEZ24238.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 608 Score = 35.4 bits (80), Expect = 9.2, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 65/292 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++N+ + +G+ +Y + N DIV +QE+ S Sbjct: 16 SAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVINNARPDIVAIQELDS 64 Query: 77 YNAVAKVFPKNTWCIF--YSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A N + + ++ + + I + K + Q++ L G Sbjct: 65 MTA-----RSNRTDVLKELAERTQLHPCFAPAIDYDGGKYGIGILSKETPLRVQTFALPG 119 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +++ + + HL E S +L A Sbjct: 120 REEARTLLVAEFPEYVFACT----------HL------SLTEEDRMKSLEILKSVAA--- 160 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +K PF +AGDFN + F K + ++ PK+ Sbjct: 161 ---DTRK----PFFLAGDFN-----SDADSGFIKDLKSTFQILSNPKQ---PTYPASEP- 204 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K +DY + + + S I D+ + SDH P+ ++ Sbjct: 205 -KETLDYLIALKQETPTFVVNSARVI----DEPLA-----SDHRPLLVEVRM 246 >gi|53715634|ref|YP_101626.1| hypothetical protein BF4354 [Bacteroides fragilis YCH46] gi|52218499|dbj|BAD51092.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 608 Score = 35.4 bits (80), Expect = 9.2, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 65/292 (22%) Query: 17 TASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS 76 +A +RL+++N+ + +G+ +Y + N DIV +QE+ S Sbjct: 16 SAQAEDVLRLMTYNVRNANGMDGIC-----------NYQRVANVINNARPDIVAIQELDS 64 Query: 77 YNAVAKVFPKNTWCIF--YSTERLINH--SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLG 132 A N + + ++ + + I + K + Q++ L G Sbjct: 65 MTA-----RSNRTDVLKELAERTQLHPCFAPAIDYDGGKYGIGILSKETPLRVQTFALPG 119 Query: 133 AKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLK 192 +++ + + HL E S +L A Sbjct: 120 REEARTLLVAEFPEYVFACT----------HL------SLTEEDRMKSLEILKSVAA--- 160 Query: 193 DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLR 252 +K PF +AGDFN + F K + ++ PK+ Sbjct: 161 ---DTRK----PFFLAGDFN-----SDADSGFIKDLKSTFQILSNPKQ---PTYPASEP- 204 Query: 253 NKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 K +DY + + + S I D+ + SDH P+ ++ Sbjct: 205 -KETLDYLIALKQETPTFVVNSARVI----DEPLA-----SDHRPLLVEVRM 246 >gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15] gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15] Length = 1179 Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 33/199 (16%) Query: 21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQY-AKNLDADIVFLQEMGSYNA 79 A +++ S+N V + D L+ +++ AD++ LQE+ Sbjct: 269 ASNLKISSYN---------VLIDSEYPPTHERDPFLISTILSESAAADVLVLQEVSDDFL 319 Query: 80 VAKVFPKN---TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDS 136 + + + + N R + + Sbjct: 320 SYILSNPDIQERYQYVSHGPPSQSDIGPLPNL--------RNVVILSRWCFSWKFVSFQQ 371 Query: 137 FSRAGN--RRAVELLVEI-NGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKD 193 + + + E + + + V +HL + S+ +QQ Q L+D Sbjct: 372 KYKGALVAKFGGLISNETCSQQGLVVAGVHLTAGLTDSSVAAK--------NQQLQALRD 423 Query: 194 WITQKKESLVPFVIAGDFN 212 ++ + ++ +VIAGDFN Sbjct: 424 YLVDQHDA-DAWVIAGDFN 441 >gi|118398919|ref|XP_001031786.1| hypothetical protein TTHERM_00723080 [Tetrahymena thermophila] gi|89286120|gb|EAR84123.1| hypothetical protein TTHERM_00723080 [Tetrahymena thermophila SB210] Length = 1306 Score = 35.4 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 6/78 (7%) Query: 224 FWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPIDYF--VMDQNAYKFLIQESFSEILYN 281 ++ N L++ + S +N N+ I +F + ++ + Y+ Sbjct: 115 LFQVNTQNTKLVQKKRYNKSYMEPGQNQENEDFISHFEELTSESIKAQATASYKEFMSYD 174 Query: 282 ----EDDIKSRGKRLSDH 295 E +K + K LSDH Sbjct: 175 IPKLEGQVKLQAKNLSDH 192 >gi|325184873|emb|CCA19365.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 328 Score = 35.4 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 33/228 (14%) Query: 67 DIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQ 126 D++ LQE F ++ IF+S HS +++ + +L Sbjct: 66 DVICLQEY--------WFNQSYERIFHS---AFQHSHTIHTIKRP---GIKQDGLAILVN 111 Query: 127 SYPLLGAKDSFSRAGNRRAV--ELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLL 184 L + +AG+R A+ L ++ + +++ HL F E L Sbjct: 112 KQKLDIQFVNPIQAGDRVAMMMHLTLKQPYQSFLLINSHLT---FPHGQEYKEIR----L 164 Query: 185 SQQAQWLK--DWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPND--SLIRFPKE 240 SQ L ++ VP ++ GDFN +ND + + N S+ Sbjct: 165 SQIQLVLNSVQGYMEQHNLQVPVLLCGDFN------DHNDPVHQKVLDNGYRSVFEVVHG 218 Query: 241 KDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSR 288 +++R + ++ +D+ + + + +F D + Sbjct: 219 REARITHCNHKNREVGVDFIFASGLSTENGKKSTFQLYPLCCDLLPRH 266 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.310 0.133 0.399 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,238,716,953 Number of Sequences: 14124377 Number of extensions: 196650336 Number of successful extensions: 601314 Number of sequences better than 10.0: 3081 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 3041 Number of HSP's that attempted gapping in prelim test: 597097 Number of HSP's gapped (non-prelim): 4004 length of query: 304 length of database: 4,842,793,630 effective HSP length: 138 effective length of query: 166 effective length of database: 2,893,629,604 effective search space: 480342514264 effective search space used: 480342514264 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 81 (35.8 bits)