PSIBLAST alignment of GI: 254781003 and protein with PDB id: 1e9n
gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism Length = 318
>gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism Length = 318
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)
Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
+ +++ SWN++ L + K DI+ LQE
Sbjct: 53 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 97
Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
K+ + S + S+ + ++ + + + + G
Sbjct: 98 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 147
Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
D R V ++ ++ + + + L
Sbjct: 148 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 200
Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
S P V+ GD N + + F + + F
Sbjct: 201 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 254
Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
+ A +DYF++ + L
Sbjct: 255 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 305
Query: 290 KRLSDHCPISI 300
SDHCPI++
Sbjct: 306 --GSDHCPITL 314