PSIBLAST alignment of GI: 254781003 and protein with PDB id: 2voa
>gi|217035255|pdb|2VOA|A Chain A, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus Length = 257
>gi|217035256|pdb|2VOA|B Chain B, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus Length = 257
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 77/306 (25%), Gaps = 77/306 (25%)
Query: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKV 83
+++ ++N+N S ++ + K DI+ +QE N
Sbjct: 2 LKIATFNVN----------------SIRSRLHIVIPWLKENKPDILCMQETKVENR---- 41
Query: 84 FPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNR 143
+ I + S + +A+ KD
Sbjct: 42 ------KFPEADFHRIGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDR----- 90
Query: 144 RAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLV 203
L+ I V++ ++ +DS + Y Q + L ++ + +
Sbjct: 91 -----LIRAKIAGIDVINTYVPQGFKIDSEKYQYK------LQWLERLYHYLQKTVDFRS 139
Query: 204 PFVIAGDFNRKIN----------------YLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA 247
V GD N + + K ++ + ++
Sbjct: 140 FAVWCGDMNVAPEPIDVHSPDKLKNHVXFHEDARRAYKKILELG--FVDVLRKIHPNERI 197
Query: 248 NKNLRNK----------IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCP 297
+ D + + + D ++ SDH P
Sbjct: 198 YTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCYA-------DIKPRLAEKPSDHLP 250
Query: 298 ISIDYD 303
+ +D
Sbjct: 251 LVAVFD 256